Physical Sciences and Mathematics Commons^™

Mesoscopic Scaling Of Microwave Transmittance And Disorder-Induced Alignment, Israel Kurtz

Dissertations, Theses, and Capstone Projects

This thesis presents microwave measurements and numerical simulations of wave propagation and transmission through random mesoscopic waveguides. We analyze the scaling of mesoscopic microwave conductance, including departures from Ohm’s law near channel openings, which are frequencies at which new propagating modes enter the system, and the evolution of modal phase alignment within the medium, which leads to the observed diversity of transmission eigenvalues. We extend the transmission matrix formalism to all sample depths using the flux matrix, which relates the flux amplitude within the sample to the incident flux, and decompose the flux at each sample depth into forward- and …

Ultrafast Spectroscopy Of Organic Materials In Strong Light–Matter Interaction And Terahertz Optics, Kamyar Rashidi

Dissertations, Theses, and Capstone Projects

Ultrafast spectroscopy is a powerful tool for investigating phenomena that occur on extremely short timescales and for probing ultrabroadband spectral responses enabled by its ultrashort laser pulses. These capabilities are essential for advancing both the fundamental understanding of light–matter interactions and the development of next-generation optoelectronic technologies. The first part of this thesis investigates the ultrafast dynamics of organic exciton–polaritons and their application to controlling molecular excited-state processes using momentum-resolved pump–probe spectroscopy. A major challenge in these systems is the dark-state problem, where photoexcitation predominantly populates long-lived excitonic reservoir states that obscure the in trinsic dynamics of the hybrid light–matter …

Prune: A Patching Based Repair Framework For Certifiable And Privacy-Robust Unlearning Of Neural Networks, Xuran Li, Jingyi Wang, Xiaohan Yuan, Peixin Zhang

Research Collection School Of Computing and Information Systems

Machine unlearning has emerged as a key mechanism for enabling the “right to be forgotten” in neural network models, allowing the selective removal of specific training data upon request. Existing approaches typically rely on retraining models with the remaining data, which is computationally expensive and difficult to verify, especially when deployed models are distributed or resource-constrained. To address this challenge, our prior conference work introduced PRUNE, a patching-based framework that formulates unlearning as a neural network repair problem. PRUNE achieves targeted forgetting by learning lightweight patch networks that redirect model predictions on the data to be unlearned while preserving performance …

Neural Symphony Of Flow Experience: Evidence For High-Dimensional Metastable Dynamics, Abdelrahman B. M. Eldaly, Kris Zhangguang Kang, Fiona Fui-Hoon Nah, Leanne Lai-Hang Chan, Keng Siau, Xiao Fan Liu, Richard Huskey, Langtao Chen, Tejaswini Yelamanchili, Rene Weber

Research Collection School Of Computing and Information Systems

Flow, an optimal experience characterized by deep immersion and engagement in an activity, has been extensively studied in behavioral research. However, its neural dynamic mechanism remains poorly understood. In a within-subject video gaming experiment, we captured neural activity underlying flow, boredom, and anxiety using a 64-channel electroencephalogram (EEG) system. Compared to boredom and anxiety, flow exhibits the highest global functional connectivity, metastability, and dimensionality of dynamic functional connectivity patterns, suggesting that flow is a highly adaptable process that is supported by high-dimensional neural dynamics. Unlike previous studies that focused on identifying static or localized brain activity, we examine the neural …

Generalized Logit Adjustment: Improved Fine-Tuning By Mitigating Label Bias In Zero-Shot Vision Models, Beier Zhu, Qianru Sun, Xun Yang, Hanwang Zhang

Research Collection School Of Computing and Information Systems

Foundation models like CLIP allow zero-shot transfer on various tasks without additional training data. Yet, the zero-shot performance is less competitive than a fully supervised one. Thus, fine-tuning and ensembling are also commonly adopted to better fit the downstream tasks. However, we argue that such prior work has overlooked the inherent biases in foundation models. Due to the highly imbalanced Web-scale training set, foundation models are inevitably skewed toward frequent semantics, and thus the subsequent fine-tuning or ensembling is still biased. In this study, we systematically examine the biases in foundation models and demonstrate the efficacy of our proposed Generalized …

Smart: When Is It Actually Worth Expanding A Speculative Tree?, Lifu Wang, Pan Zhou

Research Collection School Of Computing and Information Systems

Tree-based speculative decoding accelerates autoregressive generation by verifying a branching tree of draft tokens in a single targetmodel forward pass. However, existing methods prioritize maximizing token-level likelihood or the number of accepted tokens while ignoring a critical “efficiency paradox”: the computational overhead of drafting and verifying big trees can grow super-linearly, particularly at scale. This often leads to negative wall-clock speedup when batch sizes increase or hardware saturation limits are reached. To address this, we propose SMART, a System-aware Marginal Analysis framework for Runtime Tree construction. SMART reformulates tree expansion as a hardware-aware optimization problem that directly maximizes end-toend speedup. …

Light-Wdef: Lightweight Deepfake Evaluation Framework For Efficient And Reliable Visual Detection, Muhammad Yousaf, Sarwar Shah Khan, Babar Shah, Muhammad Shehzad Khan, Muhammad Awais Bacha, Mian Saeed Akbar, Ijaz Ali, Fernando Moreira

All Works

Deepfake technology synthesizes and manipulates digital content to produce artificial videos in which an individual’s identity, facial appearance, or actions are convincingly altered. These forgeries can be highly realistic, posing serious risks to trust in digital media and undermining personal reputation, dignity, and the integrity of public discourse. This paper presents the Lightweight Deepfake Evaluation Framework (Light-wDEF)– a resource-efficient, reproducible framework tailored for large-scale evaluation of visual deepfake detectors on modest hardware. Light-wDEF combines deterministic frame sampling, batched MTCNN face extraction, streaming append-only storage with lazy offset indexing, online Albumentations augmentations, stratified splits with class-aware sampling, and robust training (AdamW, …

Karhunen-Loève Modes For Coherent Arrays, Jack E. Mccrae, Santasri R. Bose-Pillai, Steven T. Fiorino

Faculty Publications

The optimal modes for correcting atmospheric turbulence on coherent arrays are determined. These Karhunen-Loève modes are eigenvectors of a covariance matrix. Creating this covariance matrix requires knowledge of the power spectrum of the turbulence, the aperture geometry, and a basis set for the matrix. The Kolmogorov power law is ordinarily chosen here for the turbulence spectrum. By choosing the phase on each array subaperture element minus the phase averaged over all subapertures as this basis, infinite values in the variances and covariances can be avoided. The piston mode of the whole array, which would otherwise also be infinite, is thus …

Never Say Never: The Interdependence Of No-Till And Strategic Deep Tillage In Sustainable Production Systems, Therese Mcbeath, Stephen Davies, John A. Kirkegaard

Grain and Other Field Crops Research Articles

No-till (NT) farming systems are a defining feature of modern conservation agriculture (CA), providing benefits for soil and water conservation, operational efficiency, and resource use efficiency. However, long-term NT adoption across Australian dryland cropping systems has also intensified inherent and emergent soil constraints, including subsurface compaction, topsoil water repellence, acidity, and nutrient stratification. These constraints limit crop water use and yield potential. In the sandy soils of southern and western Australia, strategic deep tillage (SDT) has been developed in otherwise NT systems to alleviate these constraints. Advances in machinery design and controlled traffic systems have enabled deeper, more effective amelioration …

An Evaluation Of Next Generation Biological Control Methods For The Invasive Brown Treesnake In The Mariana Islands, Jonathan Q. Richmond, Tim Harvey-Samuel, Melia G. Nafus, Adam Perez, Renee Bellinger, Antoinette J. Piaggio, Riley Taitingfong, Margaret E. Hunter, Robert N. Fisher

United States Department of Agriculture Wildlife Services: Staff Publications

No abstract provided.

Which Factors Are Most Important For Understanding Neighborhood-Scale Electrification Transitions In New York City, And How Do These Factors Interact Within Urban Energy Systems?, Aaryan Nair

Publications and Research

Building electrification has emerged as a central strategy for reducing greenhouse gas emissions from urban areas, yet its implementation remains uneven across cities due to differences in buildings, infrastructure, and local conditions. This literature review examines the factors that influence neighborhood-scale electrification transitions in New York City and explores how these factors interact within urban energy systems. Drawing on research from building science, energy systems, infrastructure planning, and sustainability transitions, the paper identifies five recurring categories of influence: building characteristics, demand characteristics, infrastructure conditions, planning and investment capacity, and socioeconomic conditions. The review finds that building age, typology, density, and …

Paper Wasp Species Polistes Fuscatus (Hymenoptera: Vespidae) Tracks Urban Lead (Pb) Levels More Than Polistes Dominula, Lindsey R. Kemmerling, Anna L. Lovat, Allison A. Hanka, Emilie C. Snell-Rood

The Great Lakes Entomologist

Lead (Pb) is a persistent, toxic pollutant with widespread but inequitably distributed impacts, especially for humans in urban areas. The impacts of lead pollution on other organisms is largely unknown, even as they commonly experience exposure to lead alongside humans. We tested hypotheses regarding the lead concentrations of paper wasps across a gradient of pollution relative to soil and human lead levels, and correlations with wasp body condition. We collected two species of paper wasp across an urban gradient of lead pollution: Polistes fuscatus (Fabricius) (Hymenoptera: Vespidae), native to our study location, and Polistes dominula (Christ), nonnative to our study …

Long-Term Monitoring And Response Of Papaipema Sciata Bird (Lepidoptera: Noctuidae) To Prescribed Fire In Michigan (Usa), Gregory J. Norwood, Logan M. Rowe, Brett A. Degregorio, David L. Cuthrell, Aaron D. Meredith, Steven M. Gray

The Great Lakes Entomologist

The Culver’s root borer moth (Papaipema sciata) (Lepidoptera: Noctuidae) is a rare Noctuid that requires Culver’s root (Veronicastrum virginicum) to complete its lifecycle within remnant native grasslands and open woodlands in the midwest and northeast United States. We report on 26 years of monitoring this species’ colonization of Culver’s root stems at Algonac State Park (ASP) in Michigan, where prairies have been maintained by prescribed fire since 1990. P. sciata is considered fire sensitive because eggs spend the dormant season in the combustible prairie litter and duff near host plants. The objectives were to determine the …

Complementing Topographic Wetness With Sentinel-2 Phenological Indices To Map Soil Moisture Gradients In A Snowmelt-Driven Mountain Floodplain, Edward Turk

Master's Projects and Capstones

Soil moisture in mountain floodplains varies over a few meters, far finer than ground-based sensors or coarse satellite images resolve; conventional optical and microwave methods sense only the top few centimeters, missing the root zone that governs plant function and biogeochemistry. Similarly, topography-derived moisture variations miss micro-heterogeneities in moisture related to intrinsic soil heterogeneity and/or the root zone. This has important implications for our ability to characterize local hotspots of biogeochemical reactions, like those related to the generation of methane. In this work, we read vegetation as a proxy for the subsurface, using Sentinel-2 land-surface phenology to infer root-zone moisture, …

Between Digital Transformation And Regulatory Vacuum: Cybersecurity Of Public Services In Mozambique, Faztudo Languisse Eng.

Journal of Cybersecurity Education, Research and Practice

The rapid expansion of digital public services in Mozambique—including e-government platforms, digital health systems, and electronic tax administration—has outpaced the development of a coherent legal framework for cybersecurity. While Law No. 3/2017 (Electronic Transactions Law) of 9 January 2017 introduced foundational data-protection principles, Mozambique long lacked a dedicated cybersecurity regulatory authority, mandatory security standards, and formal incident-notification mechanisms. This regulatory vacuum exposed critical public services to escalating cyber risks as digital transformation was actively promoted as a development priority. This article examines the legal and institutional gaps in Mozambique's cybersecurity governance framework prior to the 2026 Cybersecurity and Cybercrime Laws, …

Exposing And Addressing Machine Learning Brittleness Through Constraint Solving, Muyeed Ahmed

Dissertations

Machine Learning (ML) implementations are fundamentally brittle: nondeterministic, inconsistent, and prone to overfitting; however, constraint solving can be used to systematically expose, quantify, and address this brittleness.

This dissertation first establishes that widely-used implementations of popular ML algorithms are nondeterministic (producing different outputs on the same input, across different runs) and inconsistent (different implementations of the same algorithm producing different outputs on the same input). This is more prevalent in Unsupervised Learning (UL) implementations where, due to the lack of a ground truth, subtle execution errors can go unnoticed and are difficult to verify. Nondeterminism and inconsistency also introduce security …

Development Of Ultrafast Protein Digestion And Standards Free Quantitation Methods For Mass Spectrometric Analysis, Praneeth Ivan Joel Fnu

Dissertations

A wide variety of biologically important molecules, such as enzymes, antibodies, hormones, transporters and receptors are proteins by composition and they play key roles in biological functions such as cellular regulation, communication, metabolism and physiological function. Protein dysfunctions and abnormalities are associated with numerous diseases, making proteins critical targets for understanding disease mechanisms and developing therapeutic interventions. Protein-based therapeutics such as monoclonal antibodies, hormones and vaccines gained popularity due to their high specificity, efficacy, and ability to treat complex diseases that are often difficult to address with small-molecule drugs.

Given the important role of proteins in a variety of biological …

The Inverse Elasto-Acoustic Problem, Patrick Grice

Dissertations

A stable and numerically efficient boundary integral method formulation of the elasto-acoustic problem is presented, based on Fourier analysis. The method generalizes well to multiple scattering. The Frechet derivative of the elasto-acoustic problem with respect to shape perturbations is derived, and geometric flow theory is used to design stable numerical methods for the simulation of moving boundaries. The shape derivative is used to define a regularized Gauss-Newton algorithm for shape fitting of elasto-acoustic scatterers.

Geometric Convergence And State-Space Decompositions For Stochastic Gradient Descent Markov Chains, Philip Zaleski

Dissertations

No abstract provided.

Solar Wind - Magnetosphere - Ionosphere Coupling Processes Through Small-Scale Magnetic Flux Ropes, Youra Shin

Dissertations

Small-scale magnetic flux ropes (SMFRs) in the solar wind are examined to determine their properties in the near-Earth upstream region and their effects on geospace. Although SMFRs are observed frequently in the solar wind, their statistical behavior near Earth and their role in solar wind-magnetosphere-ionosphere coupling remain insufficiently constrained. In this dissertation, an automated Grad-Shafranov reconstruction technique is applied to magnetic field and plasma measurements from MMS and Wind, and ionospheric responses are investigated using geomagnetic indices and SuperDARN observations. During the survey period, MMS has an apogee of approximately 25-29 R_E. This orbital configuration allows the near-Earth …

Draft Final Butte Priority Soils Operable Unit Unreclaimed Sites: Ur-35 Construction Completion Report (Ccr), Pioneer Technical Services, Inc.

Silver Bow Creek/Butte Area Superfund Site

The purpose of this Butte Priority Soils Operable Unit (BPSOU) Unreclaimed (UR) Sites Construction Completion Report (CCR) is to describe the tasks completed as described in the Final BPSOU UR Sites: UR-35 Remedial Action Work Plan (RAWP) (referred to herein as RAWP; Atlantic Richfield Company, 2025) (Appendix A). This CCR was prepared to outline Remedial Action (RA) tasks performed at the UR source area, UR-35, within the BPSOU (referred to herein as UR-35 Site or Site) as part of the Further Remedial Elements Scope of Work described in the BPSOU Consent Decree (EPA, 2020). All work was completed according to …

Clinic-In-A-Box: A Portable, Software-Defined Cyber Range For Realistic, Scenario-Based Cybersecurity Training, Ethan Chumley, Aaron Nair, Royce Yaezenko, Joshua Payne, Veronika Kyles, Paul Wagner, Robert J. Honomichl, Ryan Straight, Shengjie Xu

Journal of Cybersecurity Education, Research and Practice

Realistic, hands-on cybersecurity training has traditionally depended on fixed infrastructure such as dedicated lab hardware, cloud subscriptions, or permanent network connectivity, limiting where and how often it can be delivered. This paper presents the design and implementation of a portable, scenario-based cybersecurity training platform housed in a single travel case and built from commodity hardware, type-1 hypervisor virtualization, containerized service orchestration, and software-defined networking. The platform clones, isolates, and resets complete lab environments on demand, allowing the same physical system to support repeated classroom, workshop, or field deployments with minimal manual reconfiguration. Training scenarios are grounded in generated organizational profiles …

Spider Biodiversity And Insecticide Sensitivity Across Active And Restored Cranberry Bogs On Nantucket, Tyler J. Kulak

Graduate Masters Theses

Spiders are one of the most diverse groups of organisms on the planet with over 53,000 species described as of 2026. They provide a suite of ecosystem services including their regulation of problematic pests in agricultural systems, appearing in high biomasses across a breadth of ecological niches. While beneficial as pest regulators, they are also susceptible to the same management techniques as pest organisms and are especially vulnerable to chemical control. Cranberry production in Massachusetts likely benefits from spider ecosystem services, but diversity research on spiders in these systems is limited. This study compares the diversity of spider populations from …

A Variational Algorithm For Preparing Superoptimal Thermal States For Quantum Thermometric Measurement Adaptable To Nisq Hardware, Nicholas Donatelli

Graduate Masters Theses

The conditional thermal state (CTS) is a probe-specific quantum thermal state that is known to outperform the Gibbs state in quantum thermometric measurements at sufficiently low temperatures. This thesis introduces a variational quantum algorithm designed to prepare the CTS on quantum computing hardware which optimizes the angular parameters of the quantum gates that comprise the ansatz circuit and, for the one-qubit case, minimizes relative infidelity of the output state with the known CTS. Using noiseless numerical simulations (SPSA with Qiskit), attempting to prepare the CTS yielded relative infidelities with the known CTS on the order of $10^{-5}$ for most parameter …

Toward The Study Of Photon Dynamics In Non-Separable Spacetimes, Kara Nelson

Graduate Masters Theses

Black holes provide a unique laboratory for testing general relativity in the strong-field regime through observations such as black hole images and gravitational wave signals. Comparing theoretical predictions with these observations requires accurate numerical models of photon trajectories. This thesis develops and validates a generalized ray-tracing framework for computing null geodesics in stationary, axisymmetric spacetimes. Unlike many existing ray-tracing methods, the framework does not rely on metric separability or analytic solutions, allowing it to be applied to both separable and non-separable spacetimes. The framework is validated by reproducing known Schwarzschild and Kerr results and is applied to a quasi-Kerr spacetime …

Electrolyte Development And Interfacial Reactions At Multivalent Metal Anode For Next Generation Energy Storage Systems, Leslie Gates

Graduate Masters Theses

The increasing demand for safe, sustainable, and high-performance energy storage systems has driven significant interest in multivalent-ion batteries, including aluminum, magnesium, and zinc-based systems. These technologies have attracted attention due to their high theoretical energy densities, natural abundance, low cost, and environmentally benign nature. However, their development remains hindered by a limited fundamental understanding of electrolyte development and interfacial processes at the electrode–electrolyte interface, where complex electrochemical interactions govern battery performance and stability.

This thesis investigates electrode–electrolyte interactions in both a novel aluminum electrolyte and divalent magnesium and zinc systems. Beginning with the development and characterization of a novel aluminum …

Microrheological Characterization Of Collagen-I Extracellular Matrix Remodeling During Tr146 Tumor Spheroid Invasion And Ppix-Mediated Photodynamic Therapy, Himantha Dilshan Saldonge

Graduate Masters Theses

Oral squamous cell carcinoma (OSCC) invasion is strongly regulated by interactions between tumor cells and the surrounding extracellular matrix (ECM). However, localized ECM mechanical changes during tumor invasion and after photodynamic therapy (PDT) remain insufficiently understood. This study mainly investigated: time-dependent viscoelastic remodeling of collagen-I ECM during TR146 tumor cell invasion, visualization of time-dependent TR146 tumor cell invasion and post-PDT response using live/dead fluorescence imaging, and the direct effect of PpIX-mediated PDT on the viscoelastic properties of spheroid-free collagen-I ECM. Three-dimensional TR146 spheroids were generated using a non-adherent agarose-based method, surrounded by a basement-membrane-like Matrigel layer, and embedded in 3.0 …

Symmetry Breaking And Restoration In The Grasshopper Ising Model, Aradh Bisarya

Graduate Masters Theses

Distance-selective interactions in Ising systems give rise to a range of rich and unexpected phenomena. A notable example is the so-called Grasshopper Ising model, a conserved spin Ising model with interactions only between spins at a fixed distance. This model is the discrete version of the following mathematical problem: A grasshopper lands at a random point on a planar lawn of area one. It then makes one jump of fixed distance in a random direction. What lawn shape maximizes the probability that the grasshopper lands on the lawn after the jump? The solution to this problem, corresponding to the ground …

Symmetric Informationally Complete Positive Operator Valued Measures Minimize P-Norm Difference Between Quantum And Classical Probability Rules, Austin Monaghan

Graduate Masters Theses

Experimental violations of Bell's inequality demonstrate quantum theory's incompatibility with a local hidden-variable formulation. Simply put, either 1) measurements performed at one point in space may instantaneously influence far away systems ("spooky action at a distance") or 2) measurement outcomes are not the result of pre-existing properties. The act of measurement takes part in the very creation of the outcomes. If we reject condition 1 as a valid assumption, how can we interpret the significance of condition 2 i.e. no local parameters?  In QBism, condition 2 arises from something deeper: that the Born rule expresses a nonclassical condition for connecting …

Infrared Detectability Of Whale Species And Behaviors To Enhance Automatic Detection For Real-Time Vessel Strike Avoidance, Laura J. Howes

Graduate Masters Theses

Real-time detection of large whales at sea is critical for mitigating serious injury and mortality from ship strikes and other human activities such as seismic surveys, especially for endangered species such as the critically endangered North Atlantic Right Whale (Eubalaena glacialis). Traditional marine mammal observers are limited by environmental conditions and human factors, necessitating a robust, 24-hour solution. This study investigates the efficacy of a novel onboard detection tool infrared (IR) technology to detect whale blows and body parts. While IR is a promising advancement, its performance under varying sea conditions (e.g., fog, humidity) and its ability to …