Physical Sciences and Mathematics Commons^™

Hidden Thermal Signatures Reveal The Microclimatic Influence Of Scheduled Cave Tourism, Matt Rowberry, John Gunn, Andrew Smith

International Journal of Speleology

Tourist activity is widely recognised as a source of cave microclimate disturbance, yet visitor-induced variability is difficult to distinguish from natural environmental fluctuations. The coronavirus pandemic created a natural experiment at Poole’s Cavern, United Kingdom, in which periods of complete closure could be compared with contrasting visitor access regimes. Two years of high resolution temperature records from six monitoring points were analysed. Harmonic regression and a state space model removed deterministic diurnal cycles and lower frequency temperature variability. The remaining residual variability differed systematically among visitor access regimes and between daytime and nighttime conditions. Spectral analysis of the residuals identified …

Did Seismic Events Trigger The Growth Of Aragonitic Speleothems In Mawmluh Cave, North-East India?, Dildi Dildi, Dana Riechelmann Dr., Michael Weber Dr., Anne Jantschke Dr., Regina Mertz-Kraus Dr., Denis Scholz Dr.

International Journal of Speleology

Mawmluh Cave, north-east India, is located in a seismically very active region within the Himalayas with frequent earthquakes of varying magnitude. So far, speleothems from the cave have mainly been used to reconstruct past monsoon variability. The potential effect of seismic events on speleothem formation in Mawmluh Cave, however, has not been studied in detail yet. We investigated three stalagmites from Mawmluh Cave, each predominantly consisting of calcite overlain by substantially younger aragonite at the top (i.e., an aragonite ‘cap’). 230Th/U-dating shows that the initiation of aragonite growth occurred between 1859 and 1950 CE in agreement with previous studies. The …

Service Robots With Low Anthropomorphism In Restaurants: Consumer Reactions And Implications, Ferhat Eren, Volkan Genc

Journal of Global Hospitality and Tourism

This study investigates consumer responses to low-anthropomorphic service robots in restaurant front of-house roles using the AIDUA (Artificially Intelligent Device Use Acceptance). Data from 1,268  participants were analysed using PLS-SEM. The results revealed that social impact and  anthropomorphism significantly influenced both performance and effort expectancy, while hedonic  motivation influenced only performance expectancy. Performance expectancy strongly influenced  emotions, which in turn significantly influenced both the willingness to use service robots and objections  to their use. However, effort expectancy did not significantly influence emotions. The findings validate the  AIDUA model in this context and offer practical insights for robot design and implementation.

Hands-On Ransomware: An Experiential Wannacry Case Study For Undergraduate Cybersecurity Education, Eli Creek Richmond, Thomas R. Devine

Military Cyber Affairs

Ransomware represents one of the most disruptive threats in the cyber landscape, yet hands-on malware analysis remains rare in undergraduate cybersecurity curricula. This paper presents the design, implementation, and evaluation of an experiential learning module centered on the WannaCry ransomware case study, deployed in a senior-level course at West Virginia University. Students performed static and dynamic analysis using industry-standard tools. Pre- and post-module assessments demonstrated measurable gains in self-reported competency across seven technical dimensions. The module's competencies align directly with DoD Cyber Workforce Framework Work Role 212, Cyber Defense Forensics Analyst, supporting education-to-workforce pipeline development.

From Framework To Toolchain: Implementing Zero Trust Architecture In Cloud-Native Environments For Dow Compliance, Shelby C. Snyder

Military Cyber Affairs

Federal agencies face a fiscal year 2027 target for enterprise-wide Zero Trust deployment, but NIST SP 800-207A defines logical components without identifying the Kubernetes technologies that implement them. This paper proposes a three-tier mapping of the Policy Engine, Policy Administrator, and Policy Enforcement Point to service mesh, microsegmentation, and perimeter tooling, stating the criteria by which each component is classified. It then applies a defined rubric to six Zero Trust vendors across component alignment, Kubernetes capability, federal authorization posture, and evidence quality, finding that no single vendor covers all three tiers. The mapping is a testable architectural proposition; a Stage …

Characterizing Advanced Persistent Threats With Cyber Attack Flow Metrics, Tyler Miller, Caleb Chang, Shouhuai Xu

Military Cyber Affairs

Cyber attack campaigns vary not only in scale but in structure, yet conventional characterizations often reduce them to a single dimension such as technique count or impact severity. In this paper we extend the concept of cyber attack flows by defining three new metrics, novelty, technique complexity and flow complexity. Then we characterize the attack flows of three advanced persistent threat campaigns using these metrics and draw insights regarding their capabilities. Our findings include that low novelty does not equate to low attack capabilities and that exploitation of an internet-facing appliance is a common initial attack vector.

Semantic Shields: Automating Critical Infrastructure Defense Via Nlp-Driven Ransomware Profiling, Henry Trowbridge, Ian Zalcberg, Ryan Schley, Carter Yagemann, Natasha Phan, Srikar Maduposu, Vimal Buck

Military Cyber Affairs

Ransomware poses a growing threat to critical infrastructure, where successful attacks can disrupt operational technology (OT) and industrial control systems (ICS) with significant public safety consequences. However, attributing ransomware incidents to specific threat actors remains challenging due to ransomware-as-a-service ecosystems, actor rebranding, and the obfuscation of traditional indicators of compromise. This paper presents Semantic Shields, an NLP-driven attribution framework that leverages BERT-generated semantic embeddings and DBSCAN clustering to profile ransomware actors through the linguistic characteristics of ransom notes. Using a dataset of 295 ransom notes from 189 distinct threat groups, the framework achieved an 87.2% true positive clustering rate and …

Closing The Interpretability Gap: Explainable Ml-Based Malware Detection For Defensive Cyberspace Operations, Tashi Stirewalt, Sean Hodgson, Puumaaya Tahiru, Assefaw Gebremedhin

Military Cyber Affairs

This paper presents an end-to-end, explainable malware triage pipeline designed for defense-oriented cyber operations. It combines high-performance static detection methods with analyst-centered interpretability. Utilizing the EMBER 2024 Windows PE subset, we train and evaluate four classifiers and select LightGBM as the production model based on its predictive performance, inference efficiency, and compatibility with exact tree-based attribution. The deployed system consists of four sequential components: PE feature extraction, malware probability scoring, dual explainability (using SHAP and LIME), and large language model (LLM) report generation, all integrated within a Flask web interface. On a temporal test set of 1,080,000 samples, LightGBM achieves …

The Fossil Pearls Of The Million-Pearls Flowstone, Fairgrounds Room, Fort Stanton Cave, New Mexico Usa, Victor J. Polyak, Paula P. Provencio, Yemane Asmerom

International Journal of Speleology

‘Fossil’ cave pearls in the Fairgrounds Room of Fort Stanton Cave form two distinct layers in a flowstone sample, FS-14-2. The flowstone in the Fairgrounds Room covers a mud-silt bank and the extinct streambed that extends across the room. Uranium-series dates of two pieces of flowstone from this room, one piece from the higher end of the flowstone (FS-14-1, devoid of pearls), and another piece from the lower end of the flowstone (FS-14-2, rich in pearls), show that the flowstone was deposited during the Last Glacial period (60,000 to 11,000 yr BP).  The two cave-pearl layers in FS-14-2 yielded U-series …

Sedimentary Dynamics In Tubular Sandstone Caves, Porto União, Southern Brazil, Leandro Bianchini, Julio Cesar Paisani

International Journal of Speleology

Clastic sedimentation in sandstone caves remains poorly understood, particularly in systems with tubular morphology. This study investigates sedimentation, reworking, and sediment removal dynamics in the Legru Cave system, southern Brazil, based on the integrated analysis of sedimentary facies, microstructures, and microfeatures, combined with optically stimulated luminescence dating. The results indicate that conduit infilling is dominated by high-density flows, including cohesive debris flows, partially diluted multiphase flows, and flows with intermediate rheological behavior between mud flow and hyperconcentrated flow, in addition to shallow flow alternations. Sediment supply is predominantly allochthonous, related to hillslope-derived material delivered by overland flow and mud flows, …

Wavelet-Based Multiscale Analysis Of Cave Co₂ Concentration In Response To Short-Term High-Intensity Tourism Activities: Spatiotemporal Heterogeneity And Lag Characteristics, Mingda Cao, Wenwen Song, Yan Zhang, Jie Zhang, Zhiqiang Yao

International Journal of Speleology

High-intensity tourism activities can cause a significant increase in cave air CO₂ concentration, thereby affecting the cave micro-environment and secondary carbonate deposition. During the 2023 National Day Golden Week, high-frequency continuous monitoring of cave air CO₂ partial pressure (PCO_2(A)) and visitor numbers was conducted in Dawang Cave, Anhui Province. Wavelet transform and cross-correlation analyses were used to reveal the multi-scale response characteristics of CO₂ concentration to tourism activities. The results show that: (1) PCO_2(A) exhibited clear diurnal variations (higher during the day, lower at night) and decreased spatially with enhanced ventilation, controlled jointly by …

Improving Cancer Diagnosis And Patient Outcomes With Deep Learning Models, Mariana Arriz-Jorquiera

USF Tampa Graduate Theses and Dissertations

Cancer care depends on timely and reliable decisions, from detection and diagnosis to treatment planning and patient monitoring. These decisions are often made under uncertainty because medical images and healthcare data may be noisy, incomplete, or difficult to interpret. In breast cancer imaging, ultrasound is widely used because it is safe, accessible, and complementary to other imaging modalities. However, variations in image quality, acquisition conditions, and noise can obscure lesion boundaries and texture, affecting human interpretation and artificial intelligence reliability. This dissertation develops deep learning, image-analysis, and optimization methods to improve healthcare decisions under imperfect information. Its primary focus is …

Toward Intelligent Machines: Conscious Learning And Hardware-Accelerated Ai, Pavia Bera

USF Tampa Graduate Theses and Dissertations

Artificial intelligence systems excel at narrow, well-defined tasks but remain brittle at theboundaries of their training distributions: they cannot quantify uncertainty, adapt continuously to non-stationary data, or operate efficiently on energy-constrained hardware. This dissertation addresses these limitations through four coordinated contributions spanning probabilistic learning algorithms, biologically inspired temporal memory, cross-entity warning propagation via distributed associative memory, and spintronic processing-in-memory.

The first contribution introduces Boosted Bayesian Neural Networks (BBNNs), which extend standard mean-field variational inference by iteratively constructing a mixture posterior through Boosting Variational Inference. On five clinical medical classification datasets, BBNNs achieve superior uncertainty calibration—lower Negative Log-Likelihood and Expected Calibration …

Autoencoders As Classifiers Trained On Single Sources Of Radiographic Images For Generalizability Across Unseen Sources, Ryan M. Putney

USF Tampa Graduate Theses and Dissertations

Artificial neural networks trained to classify X-ray images according to disease state will learn to distinguish between technical or procedural variations in the images rather than features relevant to the disease. For example, the model might learn to recognize the machine that captured the image or to distinguish an image taken while the patient is lying supine or standing upright. The present work is aimed at using autoencoders as a generalizable classifier to detect COVID vs pneumonia (PNA) X-ray images. The first experiment was to find an architecture for a fully convolutional autoencoder (CAE) and for a convolutional autoencoder with …

Multi-Modal Survival Prediction On Breast Cancer Mammograms And Enabling Multi-Institutional Collaborations With Federated Learning, Nikolas Koutsoubis

USF Tampa Graduate Theses and Dissertations

Cancer remains one of the leading causes of mortality worldwide, and machine learning is well positioned to leverage the large volumes of routinely collected clinical and imaging data to improve patient outcomes. Realizing this potential at scale requires three capabilities that current practice does not yet deliver in combination: models that integrate the multiple data modalities clinicians use, training procedures that respect institutional data-sharing constraints, and tooling that enables sharing of de-identified data when federated approaches are not sufficient. This dissertation develops methods and infrastructure addressing each of these capabilities in the context of breast cancer and oncology more broadly. …

Building Trustworthy Information Systems: A Unified Framework For Comparative Risk Detection, Parisa Momeni

USF Tampa Graduate Theses and Dissertations

Risk detection in large scale information systems increasingly depends on heterogeneous data generatedby both centralized and distributed ecosystems. While centralized systems provide curated and validated reports, distributed environments produce large-scale and real-time observational evidence. Existing computational approaches analyze these ecosystems in isolation, limiting systematic comparison of risk repre-sentations across heterogeneous sources.

This dissertation presents a unified computational framework for comparative risk detection across centralized and distributed information systems. The framework provides a domain independent methodology for transforming heterogeneous risk reporting data into comparable multidimensional representations. To enable interpretable comparison of heterogeneous risk distributions, this work introduces the Geometric Overlap Score …

Seeing Around Corners: An Indirect Light Transport Decomposition Framework For Fusing Physics And Learned Priors, Fadlullah Raji

USF Tampa Graduate Theses and Dissertations

Non-line-of-sight (NLOS) imaging, or seeing around corners, is the ability to recover information about objects hidden from direct view and remains one of the most compelling challenges in computational imaging. Existing approaches fall broadly into two categories: active and passive. Active time-resolved methods achieve impressive performance but require specialized pulsed laser hardware and ultrafast detectors, making them expensive and limited by slow measurement acquisition. Passive NLOS methods, which instead exploit the subtle soft shadows (penumbrae) cast by a hidden scene onto a visible matte surface, have recently emerged as a practical alternative. However, existing passive approaches are largely limited to …

Language Models For Oncology Clinical Text: How Model Architecture And Data Strategies Shape Tumor Phenotype Extraction And Disease Progression Detection, Thanh Duong

USF Tampa Graduate Theses and Dissertations

The rapid growth of electronic health records (EHRs) has created new opportunities to apply machine learning to clinical data.However, a large portion of important clinical information is still stored in unstructured text, such as pathology reports, radiology reports, and longitudinal clinical notes.These documents contain key details about tumor characteristics, diagnoses, treatments, and patient outcomes.Extracting structured and useful information from this text is challenging due to complex medical language, varied document formats, and the need to combine information across multiple reports over time.This dissertation studies how language models can be designed and adapted to better extract and use oncology-specific information from …

Mapping Seafloor Habitats And Characterizing Demersal Reef Fish Communities On The West Florida Shelf Across Multiple Spatial Scales Using Multibeam Sonar And Underwater Video, Alexander R. Ilich

USF Tampa Graduate Theses and Dissertations

In this dissertation, I examine the role of spatial scale in deriving seafloor terrain attributes, modeling benthic habitat, and analyzing ecological patterns of the demersal reef fish communities on the West Florida Shelf (WFS), with implications for improving predictive habitat mapping and understanding fish-environment relationships. Spatial scale plays a central role in benthic habitat mapping and ecological inference, influencing how terrain attributes are derived, how habitats are modeled, and how ecological responses are manifested. This work integrates multiscale terrain analysis, acoustic remote sensing, and community ecology to evaluate how spatial scale influences both physical habitat representation and ecological analysis.

Chapter …

Portable Trace Gas Analysis With Multipass Cavity Raman Scattering, Charuka Muktha Arachchige

USF Tampa Graduate Theses and Dissertations

The continual increase in the production and utilization of chemicals across a growing range of industrial, environmental, and medical applications necessitates accurate and efficient measurement of molecular composition. Trace gas detection is particularly critical in industrialized settings, where the identification of colorless and odorless gases is essential for ensuring operational safety and regulatory compliance. Recent advances in optical instrumentation have positioned spontaneous Raman scattering as a promising analytical technique for trace gas analysis, with multipass cavity enhancement providing a cost-effective pathway to high detection sensitivity. However, existing implementations remain confined to laboratory-scale optical table setups, limiting their applicability in field …

Designing For Fitness And Resilience In Human Artificial Intelligence Systems, Thomas R. Gill

USF Tampa Graduate Theses and Dissertations

Over the last decade, new artificial intelligence models, frameworks, and applications have emerged that have radically changed the socio-technical landscape. These new technologies represent both great opportunities and great potential risks. Due to the recency of their emergence, there is little known about the longevity and long-term repercussions of artifacts powered by new artificial intelligence technology. In this dissertation, I evaluate A.I. and A.I.-based artifacts through the lens of the fitness-utility model, a tool developed by Gill and Hevner (2013) for the evaluation of an artifact's ability to survive and reproduce over long time horizons. In so doing, I also …

Photoluminescent Studies Of Metal-Organic Frameworks For Small Molecule Sensing, Julia T. Dematteo

USF Tampa Graduate Theses and Dissertations

Metal–organic frameworks (MOFs) are highly tunable nanoporous materials with broad applications in gas separation, drug delivery, light harvesting, and chemical sensing. The incorporation of photoactive components into MOFs enables the development of optical sensors capable of detecting a wide range of analytes. Porphyrins and metalloporphyrins are particularly attractive for such applications due to their high molar absorptivity, strong emission quantum yields, and versatile interactions with chemical species.

In this work, two porphyrinic MOFs, PCN-222 and MOF1(Cd), are investigated. Both frameworks utilize tetrakis(4-carboxyphenyl)porphyrin (TCPP) as the organic linker, imparting optical functionality to the materials. Integration of TCPP into the framework induces …

Risk-Aware Deep Reinforcement Learning In Portfolio Optimization, Shimin Zhang

USF Tampa Graduate Theses and Dissertations

Portfolio optimization is important in investment, with the purpose of maximizing profit whilemanaging risk. The traditional portfolio optimization method, Modern Portfolio Theory, is based on the assumption that returns are normally distributed, which is always violated in practical financial market settings. In addition, traditional approaches to portfolio optimization are mostly designed as static optimizations and fail to account for the nonlinearity and non-stationarity of contemporary financial markets. Recent developments in deep reinforcement learning have attracted considerable attention for treating portfolio optimization as a sequential decision-making process. Traditional portfolio optimization methods usually evaluate risk based on the variance of the returns. …

Van Der Waals Interactions Through The Lens Of 2d Materials With Emphasis On Many-Body Effects, Thi Xuan Diem Dang

USF Tampa Graduate Theses and Dissertations

This dissertation addresses the long-standing challenge of accurately and efficiently modeling long-range electron correlations, with a particular focus on van der Waals (vdW) interactions. These interactions play an essential role in predicting the structure, stability, and functionality of molecular systems and condensed matter materials. Although Density Functional Theory (DFT) has become a robust cornerstone of computational materials science, traditional formulations of the theory frequently fail to capture dispersive interactions, leading to significant errors in determining interlayer distances, binding energies, and stacking configurations. These limitations become particularly pronounced in layered materials and vdW heterostructures (HSTs), where weak long-range correlations are sensitive …

Photophysical Behavior Of Ruthenium-Based Complexes: A Study Of Ligand Variation And Encapsulation In Metal-Organic Frameworks, Delaney S. Sellers

USF Tampa Graduate Theses and Dissertations

Ruthenium (II) polypyridyl complexes have emerged as a prominent class of compounds in inorganic photochemistry due to their structural robustness, reversible redox chemistry, and tunable excited-state dynamics. Central to the investigation of these systems is the ability to manipulate the triplet metal-to-ligand charge transfer state (3MLCT). In the context of photoactivated chemotherapy (PACT), the strategic deactivation of this MLCT state to populate a dissociative triplet ligand field state (3LF) can enable the controlled, light-triggered release of caged cytotoxic agents. This work focuses on understanding the caging mechanism of various ligands to optimize the eventual delivery of cytotoxic ligands. In this …

Development Of A Coupled Hydrological-Nitrogen Modeling Framework For Urban Stormwater Pond Analysis, Tione Grant

USF Tampa Graduate Theses and Dissertations

Urbanization impacts the hydrological and biogeochemical processes that regulate water quality in downstream ecosystems, leading to increased stormwater volume and nitrogen loads in receiving aquatic environments. Although stormwater ponds are designed as simple hydraulic storage basins, they function more like managed ecosystems within urban drainage systems, offering both hydraulic attenuation and passive nutrient treatment. However, nitrogen removal efficiency varies significantly and depends on interactions between hydrological and biogeochemical factors. This thesis details the development, calibration, validation, and sensitivity analysis of a coupled hydrological-nitrogen model framework for Aaran’s Pond, an urban stormwater pond in Hillsborough County, Florida.

A process-based water budget …

Trophic Structure Of Reef-Fish Assemblages In The Eastern Gulf Of Mexico Varies By Depth And Reef Type, Jessica L. Van Vaerenbergh

USF Tampa Graduate Theses and Dissertations

Globally, marine ecosystems are increasingly threatened by anthropogenic stressors, leading to reef degradation, changes in reef-fish assemblages, and altered trophic structure. In this study, I investigated reef-fish underwater visual survey data collected over a decade (2013-2023) from paired natural and artificial reefs in the eastern Gulf of Mexico. I applied the novel Normalized Reef Status Index (NRSI) to evaluate how biomass was distributed across the three trophic categories (i.e., Lower Trophic Position (LTP; 2.0-2.9), Central Trophic Position (CTP; 3.0-3.9), and Upper Trophic Position (UTP; ≥4.0). This index is a metric to assess the ecological status of reef systems by investigating …

Development And Evaluation Of The East Florida Coastal Ocean Model (Efcom), Orion B. Scharton-Witmer

USF Tampa Graduate Theses and Dissertations

Florida’s Atlantic coast has abundant resources in beaches, state parks, aquatic preserves, and wildlife refuges as well as densely populated coastal cities in low lying areas that are all subjected to natural disaster threats from the oceans. There is an urgent need for a high-resolution coastal ocean circulation model for this region. Based on the application of the Finite Volume Community Ocean Model (FVCOM), an East Florida Coastal Ocean Model (EFCOM) is developed, downscaling from the deep ocean, across the continental shelf, and into the estuaries. It employs an unstructured grid with horizontal resolution varying from 3 kilometers at the …

Amending Planting Media With Typha-Derived Biochar For Sustainable Horticulture, Elissa Touma

USF Tampa Graduate Theses and Dissertations

Constructed wetlands are widely used to improve water quality by removing excess nutrients from wastewater and stormwater. Nutrients are stored within wetland vegetation, particularly in fast-growing plants such as Typha. Harvesting vegetation provides an opportunity to permanently remove these nutrients while generating biomass suitable for beneficial reuse. Converting harvested biomass into value-added products such as compost and biochar can support nutrient recovery and sustainable biomass management. In addition, increasing concerns regarding the environmental impacts of peat extraction have created interest in renewable alternatives for horticultural growing media. Therefore, the objective of this study was to evaluate the potential of harvested …

Modeling And Mitigating Stale Hardcoded Secrets In Version Control History, Katarina Valentine Capalbo

USF Tampa Graduate Theses and Dissertations

Hardcoded secret vulnerabilities remain a growing and persistent problem that can be difficult to mitigate once exposed. While there has been significant research and advancements in identifying and preventing hardcoded secrets, less attention has been given to understanding the risks of leaving these secrets behind in version control history, as well as analyzing the sanitization of hardcoded secrets. These challenges present a growing gap between the risk and ability to mitigate and sanitize existing secret exposures. This thesis begins to address this gap by formalizing a threat model for hardcoded secrets that persist in Git version control history after the …