Physical Sciences and Mathematics Commons^™

Nebraska Statewide Groundwater-Level Monitoring Report 2025, Aaron R. Young, Mark E. Burbach, Sue Olafsen Lackey, Robert Matthew Joeckel, Jeffrey Westrop

Conservation and Survey Division: Faculty and Staff Publications

No abstract provided.

Multimodal Deep Learning For Biological Data Understanding, Saiyang Na

Computer Science and Engineering Dissertations

This dissertation presents three contributions to multimodal deep learning for biological data understanding, addressing the fundamental challenge of cross-modal alignment from two complementary perspectives: designing effective multimodal fusion methods for specific biomedical applications, and proposing a general framework for higher-order multimodal alignment that captures hierarchical structure in data.

First, we develop Cmai, a deep learning framework for B cell receptor (BCR) to antigen binding prediction that aligns BCR sequence information with antigen three-dimensional structures using contrastive learning. Cmai achieves an average AUROC of 0.907 across 17 antigens and 5 independent cohorts, and demonstrates clinical utility in predicting immune checkpoint inhibitor …

Using Herbarium Specimens To Morphologically Delineate Three Western Phlox Species, Jack David Hager, Meredith Zettlemoyer

Undergraduate Theses, Professional Papers, and Capstone Artifacts

Western Phlox are incredibly diverse, found in a variety of habitats spanning lowland meadows to high alpine tundra. The genus contains around 65 unique species, often with overlapping trait variation that makes morphological and taxonomic delineation difficult. Phlox missoulensis, a cushion-forming species endemic to the Missoula Valley, inhabits lower-elevation, windy, arid ridgelines that mimic alpine conditions. Two nearby congeners, Phlox kelseyi and Phlox pulvinata, occupy partially overlapping ecological niches: P. kelseyi is found in wet meadows at similar elevations to P. missoulensis, while P. pulvinata is found in higher elevation environments. P. missoulensis exhibits morphological characteristics that are intermediate between …

Evaluating Llms For Cpe Identification In Iot Reconnaissance, Christopher Davisson

EWU Masters Thesis Collection

Vulnerability identification during penetration testing relies on rigid string-matching to map network scan data to Common Platform Enumeration (CPE) identifiers and downstream Common Vulnerabilities and Exposures (CVEs). The approach frequently fails on physical Internet of Things (IoT) devices, which produce non-standard, irregular service banners that resist deterministic parsing. Large Language Models can reason through these fuzzy associations, but cloud-hosted models introduce cost, latency, and operational security concerns when processing reconnaissance data from live networks. This thesis asks whether locally-hosted open-weight Large Language Models (LLMs) can perform this task well enough to be useful, and how performance varies with model scale, …

Handwriting Recognition In Vr, Dominique Mosley

EWU Masters Thesis Collection

Virtual Reality (VR) is slowly becoming more popular for more than just entertainment. VR can be found in educational, office, and even healthcare settings to help discover more intuitive ways to teach, collaborate, and treat patients. Outside of the virtual world, these environments typically rely on writing for communicating or note-taking. Currently, VR input forces users to rely on clunky on-screen keyboards which disrupts the user’s immersion and breaks the flow of natural interaction. This thesis explores the potential of VR as a learning platform by combining it with artificial intelligence (AI). It aims to develop a VR-enhanced handwriting practicing …

Macroinvertebrate Taxonomic And Functional Diversity In The Spokane River Watershed, Kaitlin L. Abell

EWU Masters Thesis Collection

Changes in land use, such as agricultural expansion, have impacted stream systems by modifying discharge, substrate diversity, channel morphology, and nutrient inputs. The Spokane River Watershed is heavily impacted by human activity, including urban and agricultural development. Rehabilitation efforts are being organized to reintroduce Salmonidae species in the Spokane River Watershed. The first step of this reintroduction is to perform habitat studies to inform allocation of restoration efforts. As part of this effort, I performed benthic macroinvertebrate surveys throughout the watershed.

The objective of my research was to use the macroinvertebrate community as a biological indicator to determine which habitat …

Assessing Forest Health And Small Mammals After A Limited Suppression Wildfire In Colville National Forest, Samantha J. Kennel

EWU Masters Thesis Collection

In the face of a wildfire crisis, there is a growing need to expand the pace and scale of forest treatments, including the strategic use of wildfire as a management tool. However, ecological outcomes remain uncertain in forests shaped by more than a century of fire suppression. The 2022 Thor Fire, a managed wildfire in the Colville National Forest, Washington, provides an opportunity to evaluate forest health in a relatively understudied system. Using a control–impact design, I established 100 monitoring plots in burned and adjacent unburned forests to assess how wildfire and fire severity influence forest structure, fuels, and tree …

Legal Ethics Of Ai Snake Oil: Navigating The Hype, Harm, And Hope Of Legal Ai, Drew Simshaw

Scholarly Works

This paper argues that the legal ethics of AI extend far beyond competence and hallucinations. It shows how AI often functions as a mirror, exposing deeper ethical questions about institutional incentives, lawyer wellbeing, access to justice, and AI's broader social and environmental impacts.

Land Use And Land Cover Simulation Via Integrated Modelling With Gis Techniques For Sustainable Land Utilization Development In The Northeast Khong Subwatershed Of Thailand, ฺBanchongsak Faksomboon, Thipphaphone Keoviyavong

Applied Environmental Research

Land utilization is an important indicator of socioeconomic and environmental changes caused by both natural and man-made factors. Land use and land cover (LULC) simulation is a critical tool for monitoring and predicting LULC and is essential for sustainable development, land resource management and planning. The cellular automata (CA) Markov model is the basis for the current study’s prediction of LULC changes in the Northeast Khong Sub Watershed (NKSW). Landsat data from 2013 to 2023 were used to investigate LULC classification and determine the spatiotemporal distributions of LULC. In addition, LULC data from 2013 and 2023 were used to generate …

Reduction Of Cr(Vi) With Infrared Light And Chemical Adsorption Of Cr(Iii) By A God-Crown/Bentonite Composite For Electroplating Waste Remediation, Andre Taufik Kurniawan, Muhammad Djoni Bustan, Sri Haryati

Applied Environmental Research

Heavy metal pollution, particularly chromium (Cr) from electroplating industrial waste, has severely threatened environmental quality and human health. This study aims to develop a composite adsorbent material based on bentonite and god crown biomass capable of removing chromium ions from liquid waste through a combination of reduction and adsorption mechanisms. The god crown/bentonite (GC/Bt) composite was synthesized at a mass ratio of 2:1 and calcined at 900°C. FTIR characterization revealed active functional groups (–OH, C=O, Si–O, and Al–O–Si), whereas BET analysis revealed a mesoporous structure (surface area 31.12 m2 g-1, pore diameter 4.37 nm) suitable for ion diffusion. The reduction …

Climate And Environmental Controls On Forest Soil Organic Matter Cycling, Genevieve Goebel

Dartmouth College Ph.D Dissertations

Climate change factors act on the soil environment in complex ways, known to disturb soil organic carbon (C). Rising global temperatures and alterations to regional precipitation and nitrogen deposition regimes may contribute to the intensification of global change by accelerating the rate of biological decomposition and CO2 efflux to the atmosphere. The magnitude and endurance of the disturbance to soil organic C across landscapes and throughout time that climate change factors may pose to soil C cycling are not comprehensively understood. These knowledge gaps in our field make it challenging to anticipate how soil environments and the vast ecosystems that …

Cross-Temporal Statistical Approaches For Evaluating Predictor-Outcome Relationships, Jeff Joseph

Dartmouth College Ph.D Dissertations

Central auditory function is linked with cognitive deficits, but few research projects use existing statistical approaches or develop new ones to forecast cognitive deficits using the results of central auditory tests. To address this limitation, we use a series of statistical learning frameworks for predicting a child’s cognitive abilities based on his/her central auditory performances and demographic factors. Two key challenges exist. First, children may start the study at a time when they are unable to perform the central auditory tests or cognitive tests. Second, cognitive performance is age-dependent, particularly in the early formative years of childhood and adolescence. To …

Comparative Assessments Of Methane Flux Measurement Techniques In Serpentinite-Influenced Groundwater Wells, Madison J. Stetson

Open Access Master's Theses

Methane (CH₄₎ emissions from continental serpentinizing systems represent a significant component of Earth’s carbon cycling. Despite increasing recognition of serpentinite-hosted water-rock interactions as a source of trace gases, standardized field methodologies for quantifying trace gas flux from groundwater wells and similar subsurface conduits remain limited. This study addresses that gap by evaluating the reliability and replicability of three chamber-based sampling methods for measuring gas flux in serpentinite-hosted groundwater systems accessed by groundwater monitoring wells. Field measurements were conducted at the Coast Range Ophiolite Microbial Observatory (CROMO) within the McLaughlin Natural Reserve in Lower Lake, California, a site …

Seasonal Variations In Co2 Emission From Poultry Manure-Amended Soils In Two Contrasting Tropical Agroecosystems, Gladys M. Akande, Adebayo J. Adeyemo, Chidozie J. Oraegbunam, Iduh J.J. Otene, Ezekiel C. Are, Babatunde S. Ewulo, Chioma M. Ahukaemere, Samuel O. Kolawole, Sunday E. Obalum

Applied Environmental Research

The soil remains the largest carbon sink, the capacity of which varies spatiotemporally and with anthropogenic activities, with implications for carbon dioxide (CO2) emissions and associated global warming. Despite the increasing popularity of organic amendments in the ecologically and anthropoculturally diverse farming systems of tropical Africa, manure-induced CO2 emissions in this region with high soil-carbon-sequestration potential are poorly documented. This study assessed seasonal CO2 emissions from poultry manure-amended sandy-clay-loam and sandy-loam soils in the Rainforest-Savannah and Southern Guinea Savannah zones, respectively, of Nigeria. Following manure application at 3 rates (0, 10, and 15 t ha-1), soil samples were collected during …

Activated Carbon Prepared From Residual Eucalyptus Wood For The Removal Of Methyl Orange: Equilibrium, Kinetics, Thermodynamics, And Desorption, Mathin Jaikua, Phuthidhorn Thanaphu, Sunisa Ungwiwatkul, Jakkrawut Maitip, Kanyarak Prasertboonyai

Applied Environmental Research

This research utilizes activated carbon derived from residual Eucalyptus wood (EW) for the removal of methyl orange (MO). The residual Eucalyptus wood-based activated carbon (EWAC) was produced through carbonization at 400 °C (EWC) followed by activation with a mass ratio of H3PO4 to EWC of 1:3, which was conducted at 800 °C for 1 h. The characterization of the EWAC involved various analytical techniques, including FTIR, XRD, BET, and CHN analysis. The adsorption parameters, such as pH (range: 3–8), adsorbent dose (range: 0.01–0.5 g per 50 mL of MO solution), contact time (range: 5–720 min), initial MO concentration (range: 5–600 …

Bioremediation Potential Of Indigenous Stutzerimonas Stutzeri 08tbb Isolated From Mercury-Contaminated Gold Mining Sites In Indonesia, Uun Rohmawati, Juanita Hibatullah, Achmad Rodiansyah, Yunita Messe, Dwi Nur Aini Fajriah

Applied Environmental Research

Artisanal and small-scale gold mining (ASGM) widely uses mercury (Hg) in the amalgamation process, and the resulting waste is often discharged directly into the environment, posing serious risks to ecosystems and human health because of the high toxicity of Hg. This study aimed to isolate and screen indigenous Hg-tolerant bacteria from contaminated gold mining sites in Indonesia; characterize the most effective isolate using morphological, biochemical, and molecular approaches; evaluate Hg(II) degradation performance using ICP‒OES, FTIR, and SEM analyses; and identify key metabolites involved in Hg detoxification through untargeted LC–HRMS metabolomics. A total of 51 bacterial isolates were obtained from Hg-contaminated …

Assessment Of Chromosomal Abnormalities In Hybrid Catfish In Reservoir Contaminated With Heavy Metals From Municipal Landfill, Tanadol Savigun, Natchanon Thiratanaboon, Nuttawadee Maneesan, Manop Sriuttha, Lamyai Neeratanaphan

Applied Environmental Research

In this study, the concentrations of heavy metals (As, Cd, Cr and Pb) in water, sediment, and hybrid catfish (Clarias gariepinus x C. macrocephalus) as well as chromosomal abnormalities (CAs) from a reservoir affected by leachate from a municipal landfill were compared to those in an unaffected reservoir. Heavy metal concentrations were analyzed using inductively coupled plasma‒optical emission spectrometry (ICP‒OES). Chromosomes were prepared from kidney cells by direct methods. The As, Cd and Pb concentrations in the water and sediment from both reservoirs were within the Thailand water and soil standards. The concentrations of As and Cd in the water …

Ammonium Adsorption From Aqueous Solutions Using Mnfe2o4-Functionalized Coffee Husk Biochar Nanocomposites : An Evaluation Of Hno3 And Naoh Activation, Thuy-Tien Do, Huu-Tap Van, Thi-Minh-Thu Nguyen

Applied Environmental Research

This research investigated the development of MnFe2O4-based composite adsorbents (MFO@CFA and MFO@CFB) by activating coffee husk-derived biochar with HNO3 and NaOH, followed by synthesis through coprecipitation and hydrothermal techniques. The structural and chemical properties of the nanocomposites were characterized by scanning electron microscopy (SEM) and Fourier transform infrared (FTIR) spectroscopy. Batch adsorption experiments were used to assess ammonium removal efficiency across a range of conditions: solution pH (3–8), contact time (5–120 min), adsorbent dosage (0.2–3 g L-1), and initial ammonium concentration (10–60 mg L-1). The findings indicated that compared with MFO@CFB, which was synthesized from NaOH-activated biochar, MFO@ CFA, derived …

Assessing Forest Fragmentation And Edge Expansion In Nan Province, Thailand, Using Landsat Data (2014–2022), Kasidit Rison, Marut Fuangarworn, Chatchawan Chaisuekul

Applied Environmental Research

The increasing pressure from land-use change and agricultural expansion in Nan Province, northern Thailand, has accelerated forest fragmentation and reduced the ecosystem service value (ESV) of the landscape. This study aims to: assess land use and forest fragmentation change in Nan Province between 2014 and 2022, and evaluate the impact of land use change on ESV. Landsat 8 OLI satellite imagery from 2014 and 2022 was used to classify land cover into five types: forest, agriculture, settlements, exposed soil, and others. Forest fragmentation was evaluated using landscape metrics such as patch number, mean patch size, edge length, and core area. …

Application Of Diatom Indices To Monitor Environmental Shifts In The Downstream Tuntang River, Central Java, Mirza Hanif Al Falah, Tri Retnaningsih Soeprobowati, Hadiyanto -, Muhammad Isnaini Ibnu Sabil, Marta Wojewódka-Przybył, Łukasz Kruszewski, Paweł Rydelek

Applied Environmental Research

Diatoms are widely recognized as sensitive bioindicators for reconstructing past water quality and ecological changes in aquatic ecosystems. In this study, multiple diatom-based indices were applied to sediment cores collected from three downstream stations of the Tuntang River, Central Java, to infer long-term environmental change in a tropical river system. A total of 38 sediment subsamples were analyzed, with dominant taxa including Fragilaria crotonensis (2.4–18.6%), Nitzschia palea (3.1–22.4%), and Aulacoseira granulata (2.0–15.8%), indicating sustained nutrient enrichment. Diatom indices consistently classified conditions as mesotrophic to eutrophic throughout the sediment profiles. The occurrence of the marine diatom Cylindrotheca closterium (up to 6.3%) …

Environmental Sustainability Performance And Efficiency In Thailand’S Rajabhat Universities : A Cross-Regional Analysis Of The Impact Rankings, Konstantinos Balis

Applied Environmental Research

Higher education institutions (HEIs) are expected to increasingly communicate their contributions to the United Nations’ Sustainable Development Goals (SDGs), with the rise of alternative sustainability rankings serving as prominent reporting instruments for institutional transparency. In Thailand, Rajabhat Universities, a network of government HEIs historically associated with their mission of teacher training and local development, have been actively participating in the Times Higher Education (THE) Impact Rankings, presenting a unique case study to explore cross-regional sustainability efforts in relation to global benchmarks. To evaluate trends, regional disparities, and engagement performance across the sustainability pillars, this study uses a descriptive quantitative design …

Initial Screening Of Halophilic Plastic-Degrading Bacteria From Mangrove Water And Sediment In Pekalongan, Indonesia, Novia Safinatunnajah, Muhammad Zainuri, Aris Ismanto, Tony Hadibarata, Kunarso -, Sugeng Widada, Hermin Pancasakti Kusumaningrum, Candra Wahyuningsih

Applied Environmental Research

Microplastic pollution in tropical mangrove ecosystems represents an increasing environmental concern, particularly in coastal regions such as Pekalongan, Indonesia, where industrial and residential activities contribute substantially to plastic waste. This study aimed to isolate and preliminarily screen halophilic bacteria from mangrove sediments and seawater collected from a plastic-impacted coastal area. Using mineral salt medium (MSM) supplemented with polyethylene glycol (PEG), six bacterial strains were obtained and evaluated for their potential to interact with polyethylene (PE) and polypropylene (PP) on the basis of gravimetric weight loss measurements. Among the isolates, Halomonas Cupida A1, Marinobacter nauticus A6.3, and Marinobacter nauticus SD5.2 exhibited …

Advancing Food Equity Through Explainable Ai (Xai): Identifying Place-Based Factors And Conditions Of Food Security, Leslie Hoglund, Hyoshin Park

Health Behavior, Policy & Management Faculty Publications

Food behaviors, food security, and their association with socioeconomic factors constitute a critical area of study with implications for public health, economic stability, and social equity. Understanding these relationships are essential for developing effective policies and interventions that promote sustainable, healthy food systems and greater food equity. This paper employs explainable artificial intelligence (XAI) methods to identify key features influencing household food behaviors. The insights gained from the XAI analysis are further utilized in conjunction with inverse reinforcement learning (IRL) to examine expert behaviors related to eating habits satisfaction. The XAI results reveal that household health conditions, spending patterns, and …

Machine Learning: Thematic Feature Grouping, And The Magnificent Seven: A Forecasting Analysis, Mirarmia Jalali, Mohammad Najand, Andrew Cohen

Finance Faculty Publications

This study examines the predictability of monthly excess returns for the “Magnificent Seven” U.S. technology firms using machine learning and economically motivated thematic feature grouping. Framed as a focused study of the most systemically consequential equity panel in modern markets—seven firms representing over 30% of the S&P 500—the analysis confronts a small-N, large-P environment where economically structured dimensionality reduction is essential. Using 154 firm-level characteristics categorized into 13 economic themes, we evaluate linear, penalized, tree-based, and neural network models in a small-N, large-P setting. Unrestricted models suffer substantial overfitting and fail to outperform the historical average benchmark out-of-sample. In contrast, …

Natural Resource Rents And Energy Poverty Nexus In Next Eleven Economies, Muhammad Salah Uddin, Ayub Ali, Zobayer Ahmed, Md Nasir Uddin Sikdar, Ahsan Habib, Abdullah Elah Al-Mahde

Finance Faculty Publications

Energy poverty (EP) remains a persistent global challenge with important implications for economic development, public health, and social welfare. While natural resources, particularly oil and gas, are often viewed as key sources of energy access, their effectiveness in mitigating EP remains underexplored in emerging economies. This study examines the relationship between natural resource rents (NRR), specifically oil rents (OR) and natural gas rents (NGR), and energy poverty (EP) in the Next Eleven (N-11) countries from 2000 to 2020. The primary objective is to assess how NRR influences EP at various levels of poverty using the Method of Moments Quantile Regression …

Design, Synthesis, And Characterization Of Phosphonate-Functionalized Diimide Ligands For Metal-Organic Framework Construction, Kenya Rosas, Jonathan Uribe

Posters - 2026

• Metal–organic frameworks (MOFs) are solid, porous materials composed of metalions reacted with organic linkers

• MOFs are customizable through variations in their metal ions, organic linkers, and the functional groups of the organic linker all yielding a structure with different properties

• MOFs have a variety of applications, ranging from storage and catalysis to drug delivery

• The synthesis and characterization of four phosphonate-based diimide ligands:
  • N,N´-bis(phosphonomethyl)-pyromellitimide (PPMI).
  • N,N´-bis(phosphonobenzyl)-pyromellitimide (PPMI-Ph).
  • N,N´-bis(phosphonomethyl)-3,3′,4,4′-biphenylenediimide (PBDI).
  • N,N´-bis(phosphonobenzyl)-3,3′,4,4′-biphenylenediimide (PBDI-Ph).

• These ligands were then coordinated with zinc or copper metal ions to make MOFs.

Comparative Machine Learning Models For Disease Risk Prediction, Mercy Mawusi Agbley

Theses, Dissertations and Capstones

Accurate prediction of disease outcomes is crucial for improving clinical decision-making and enabling early intervention. This study compares the performance of various statistical and machine learning models for clinical risk prediction using two healthcare datasets: diabetic retinopathy and heart disease. The models assessed include Logistic Regression, LASSO, k-Nearest Neighbors (KNN), Support Vector Machines (SVM), Neural Networks, Random Forests, Gradient Boosting Machines (GBM), and a stacked ensemble model. Prior to modeling, datasets were split into train and test sets. Standardization was applied to numeric features whilst categorical features were one-hot encoded. These transformations were later applied to the test set. Principal …

The Link Fantastic: Detecting And Linking Simulated, Nongravitationally-Accelerating Objects With The Rubin Observatory Pipeline, Ellie White

Theses, Dissertations and Capstones

Rubin Observatory’s Legacy Survey of Space and Time (LSST) is poised to revolutionize our understanding of the Solar System. After only a few months of regular operations, Rubin has already discovered over 11,000 new Solar System bodies, and is projected to discover millions more. With discoveries pouring in, and with the development of moving object detection pipelines for routine observing, one key question is: how effectively can Rubin detect and identify objects with anomalous trajectories? The answer is of interest not only for natural bodies in our Solar System, but also in the search for technosignatures, which could be identified …

Spatial Temporal Modeling Of Infectious Disease Patterns In Texas, Robert E. Lashbrook

Earth & Environmental Sciences Theses

The Texas Department of State Health Services monitors numerous notifiable conditions statewide, including Campylobacter, Salmonella, Shiga toxin-producing Escherichia coli (STEC), Rabies, and West Nile virus (WNV). Given the substantial health, economic, and public health burden associated with these conditions, improving prediction is an important step toward reducing their overall impact. This study evaluated whether external demographic, social, climate, and environmental data could improve prediction of county-year disease activity across Texas. County level data was analyzed using supervised machine learning models, including linear regression, ridge regression, multilayer perceptron, random forest, XGBoost, as well as K-means clustering to identify broader …

Investigating The Viability Of Fully Online Asynchronous Physics Instruction In Formal Education, Clifton W. Massey-Noel

Physics Dissertations

In this dissertation we present results from two consecutive investigations into the fully online asynchronous modality in Physics Education. We first discuss the efficacy of a fully online asynchronous section of Modern Physics held in Fall 2024. The asynchronous section is compared with four prior partially-flipped sections of the same class, two of which were held in-person, and two of which were held synchronously online. Results suggest that all three modalities can be made to be about equally as effective. We also discuss the efficacy of a fully online asynchronous section of Calculus-Based Introductory Mechanics held in Fall 2025. The …