Physical Sciences and Mathematics Commons^™

Restructuring Pedagogical Norms In Stem: Towards A Socially And Ethically Conscious Approach To Computer Science Higher Education, Alison Kim , '23

Senior Theses, Projects, and Awards

No abstract provided.

Viscous Thin-Film Models Of Nanoscale Self-Organization Under Ion Bombardment, Tyler Evans

Mathematics Theses and Dissertations

For decades, it has been observed that broad-beam irradiation of semiconductor surfaces can lead to spontaneous self-organization into highly regular patterns, sometimes at length scales of only a few nanometers. Initial theory was largely based on erosion and redistribution of material occurring on fast time scales, which are able to produce good agreement with certain aspects of surface evolution. However, further experimental and theoretical work eventually led to the realization that numerous effects are active in the irradiated target, including stresses associated with ion-implantation and the accumulation of damage leading to the development of a disordered, amorphous layer atop the …

Practical Implementation Of The Immersed Interface Method With Triangular Meshes For 3d Rigid Solids In A Fluid Flow, Norah Hakami

Mathematics Theses and Dissertations

When employing the immersed interface method (IIM) to simulate a fluid flow around a moving rigid object, the immersed object can be replaced by a virtual fluid enclosed by singular forces on the interface between the real and virtual fluids. These forces represent the impact of the rigid motion on the fluid flow and cause jump discontinuities across the interface in the whole flow field. Then, the IIM resolves the fluid flow on a fixed computational domain by directly incorporating the jump conditions across the interface into numerical schemes. Previous development of the method is limited to simple smooth boundaries. …

Exploring Protein Conformations And Functions Through Molecular Dynamics Simulations And Machine Learning, Hao Tian

Chemistry Theses and Dissertations

Proteins are essential biomacromolecules that perform a variety of critical functions in living organisms. The tertiary structure of a protein plays a crucial role in its biological activity as it determines how the protein interacts with other molecules. Consequently, understanding protein conformation and function is an important area of research with implications in medicine, biotechnology, and other fields.

The first part of this dissertation focuses on protein allostery, a process by which proteins transmit perturbations caused by binding at one site to a distal site, thereby regulating activity. With the development of computational methods like molecular dynamics simulations and machine …

Novel Generalizations And Algorithms For The Max-K-Coverage Problem, Luc Cote

Computer Science Senior Theses

In this thesis we consider the fundamental optimization problem known as the Max-k- Coverage problem and its generalizations. We first discuss the well-studied generalization to the problem of maximizing a monotone submodular function subject to a cardinality constraint and introduce a new primal-dual algorithm which achieves the optimal approximation factor of (1 − 1/e). While greedy algorithms have been known to achieve this approximation factor, our algorithms also provide a dual certificate which upper bounds the optimum value of an instance. This certificate may be used in practice to provide much stronger guarantees than the worst-case (1 − 1/e) approximation …

An Empirical Study Of Locality-Sensitive Hashing To Approximate The Minimum Spanning Tree, Elizabeth Crocker

Computer Science Senior Theses

The minimum spanning tree is a problem with important applications but for which there are no known efficient algorithms for large data sets. Locality-sensitive hashing has been used to solve the near-neighbor problem and further applications in clustering, which indicates its potential for approximating the minimum spanning tree as well. An algorithm by Sariel Har-Peled, Piotr Indyk, and Rajeev Motwani utilizes locality-sensitive hashing to provide a c-approximation of the minimum spanning tree in O(dn^1+1/c log² n) time. In this thesis, we implement and test this algorithm. We determine that the algorithm is suited to provide a better-than-random approximation …

Using Object Detection To Navigate A Game Playfield, Peter Kearnan Hyde-Smith

Master's Theses (2009 -)

Perhaps the crown jewel of AI is the self-navigating agent. To take many sources of data as input and use it to traverse complex and varied areas while mitigating risk and damage to the vehicle that is being controlled, visual object detection is a key part of the overall suite of this technology. While much efforts are being put towards real-world applications, for example self-driving cars, healthcare related issues and automated manufacturing, we apply object detection in a different way; the automation of movement across a video game play field. We take the TensorFlow Object Detection API and use it …

Exploring Post-Quantum Cryptographic Schemes For Tls In 5g Nb-Iot: Feasibility And Recommendations, Kadir Sabanci

Master's Theses (2009 -)

Narrowband Internet of Things (NB-IoT) is a wireless communication technology that enables a wide range of applications, from smart cities to industrial automation. As a part of the 5G extension, NB-IoT promises to connect billions of devices with low-power and low-cost requirements. However, with the advent of quantum computers, the incoming NB-IoT era is already under threat due to conventional cryptographic algorithms that might be adapted to secure devices in NB-IoT being susceptible to be broken soon. In this context, we investigate the feasibility of using post-quantum key exchange and signature algorithms for securing NB-IoT applications. We develop a realistic …

A Node Elimination Algorithm For Cubatures Of High-Dimensional Polytopes, Arkadijs Slobodkins

Mathematics Theses and Dissertations

Node elimination is a numerical approach for obtaining cubature rules for the approximation of multivariate integrals over domains in Rⁿ. Beginning with a known cubature, nodes are selected for elimination, and a new, more efficient rule is constructed by iteratively solving the moment equations. In this work, a new node elimination criterion is introduced that is based on linearization of the moment equations. In addition, a penalized iterative solver is introduced that ensures positivity of weights and interiority of nodes. We aim to construct a universal algorithm for convex polytopes that produces efficient cubature rules without any user …

In Situ Microwave Fixation Provides An Instantaneous Snapshot Of The Brain Metabolome, Jelena A. Juras, Madison B. Webb, Lyndsay E. A. Young, Kia H. Markussen, Tara R. Hawkinson, Michael D. Buoncristiani, Kayli E. Bolton, Peyton T. Coburn, Meredith I. Williams, Lisa P. Y. Sun, William C. Sanders, Ronald C. Bruntz, Lindsey R. Conroy, Chi Wang, Matthew S. Gentry, Bret N. Smith, Ramon C. Sun

Markey Cancer Center Faculty Publications

Brain glucose metabolism is highly heterogeneous among brain regions and continues postmortem. In particular, we demonstrate exhaustion of glycogen and glucose and an increase in lactate production during conventional rapid brain resection and preservation by liquid nitrogen. In contrast, we show that these post- mortem changes are not observed with simultaneous animal sacrifice and in situ fixation with focused, high- power microwave. We further employ microwave fixation to define brain glucose metabolism in the mouse model of streptozotocin-induced type 1 diabetes. Using both total pool and isotope tracing analyses, we identified global glucose hypometabolism in multiple brain regions, evidenced by …

Targeting Lncrna Ddit4-As1 Sensitizes Triple Negative Breast Cancer To Chemotherapy Via Suppressing Of Autophagy, Ting Jiang, Jiaojiao Zhu, Shilong Jiang, Zonglin Chen, Ping Xu, Rong Gong, Changxin Zhong, Yueying Cheng, Xinyuan Sun, Wenjun Yi, Jinming Yang, Wenhu Zhou, Yan Cheng

Markey Cancer Center Faculty Publications

In this study, it is found that the lncRNA, DNA damage inducible transcript 4 antisense RNA1 (DDIT4-AS1), is highly expressed in triple-negative breast cancer (TNBC) cell lines and tissues due to H3K27 acetylation in the promoter region, and promotes the proliferation, migration, and invasion of TNBC cells via activating autophagy. Mechanistically, it is shown that DDIT4-AS1 induces autophagy by stabilizing DDIT4 mRNA via recruiting the RNA binding protein AUF1 and promoting the interaction between DDIT4 mRNA and AUF1, thereby inhibiting mTOR signaling pathway. Furthermore, silencing of DDIT4-AS1 enhances the sensitivity of TNBC cells to chemotherapeutic agents such as paclitaxel both …

Sustainable Development In Hazard Mitigation Planning, Brooke Morrell

Goal 11: Sustainable Cities and Communities

No abstract provided.

Investigating Chlorate In Water As A Cause Of Chlorate In Milk, Lorna Twomey, D. Gleeson, A. Furey

Physical Sciences Publications

The findings of this laboratory based experiment suggest that waters with increasing total chlorine levels will have increased chlorate levels and should that water come into contact with milk it has the potential to cause chlorate contamination of said milk. This study provides the information needed to design targeted field based experiments that are required to establish the trends and behaviours of chlorate in water when used as part of the cleaning process on dairy farms and its impact on milk residues and is requisite for the betterment of the dairy industry in terms of its understanding of contamination of …

Discovering Dune: Essays On Frank Herbert’S Epic Saga., Edited By Dominic J. Nardi And N. Trevor Brierly, G. Connor Salter

Mythlore: A Journal of J.R.R. Tolkien, C.S. Lewis, Charles Williams, and Mythopoeic Literature

G. Connor Salter reviews Discovering Dune: Essays on Frank Herbert’s Epic Saga, edited by Dominic J. Nardi and N. Trevor Brierly, considering its new contributions to studies of Frank Herbert's work. Essays included fit into four categories (Politics and Power, History and Religion, Biology and Ecology, and Philosophy, Choice and Ethics) and range from Herbert's use of ecology in Dune to how game theory may help explain certain characters' apparent ability to see the future. Discovering Dune also includes an appendix which contains the only up-to-date bibliography of Herbert's work (primary and secondary sources).

Surface And Alloy Engineering Of Halide Perovskite (Cspbx3) Nanocrystals For Efficient And Stable Optoelectronics, Sakiru L. Abiodun

Theses and Dissertations

Organic and inorganic halide perovskite quantum dots (QDs) (in form of ABX₃, where A is organic cation e.g CH₃NH₃⁺ or inorganic cation e.g Cs⁺) have emerged as an intriguing alternative to the widely studied chalcogenide and pnictide QDs. Their excellent optoelectronic properties such as large absorption coefficient, high carrier mobility, wide color gamut, long electron-hole diffusion lengths, and tunable bandgap energy are largely responsible for their wide acceptability in various electronic devices. However, despite this enthusiasm, the problem of purification, long-term stability, lead toxicity and inadequate knowledge of their surface chemistry still …

Structural And Immunological Characterization Of Inhaled Allergens And Their Complexes With Antibodies, Kriti Khatri

Theses and Dissertations

Allergy is an outcome of an allergen-antibody reaction (1). Potent airborne allergens from dust mites and pets are major causative factors for allergic conditions among predisposed individuals. Group-2 allergen Der p 2 from Dermatophagoides pteronyssinus is a major allergen which causes allergic conditions in more than 80% of mite-allergic subjects (2). Similarly, airborne allergen Can f 1 from dog (Canis familiaris) is also a major risk allergen which affects 10-20% of the population worldwide (3). Considering the increasing prevalence of inhalant allergens in the environment, antigenic characterization is crucial for improving allergy diagnostics and management. This study focuses …

Hydrothermal Liquefaction Of Saccharina Latissima For The Production Of Biofuel, Mayokun A. Oke

Mechanical Engineering Theses

We performed hydrothermal liquefaction of brown macroalga (Saccharina latissima) in the presence of homogenous and heterogenous catalysts such as KOH, Na₂CO₃, Pd/C, HZSM-5, Ce/HZSM-5, and Ni/SiO₂-Al₂O₃ in hot compressed water, to investigate their effects on product yield and composition in the biocrude. To investigate hydrocarbon production, we used methanol as co-solvent (methanol-to-water 1/4 vol.%) and as the only liquefaction solvent. We carried out the experiments in a batch reactor at 330^oC and 120-130 bar, and varying temperature, algae-to-water ratio, residence time, and pretreatment method. The biocrude yields …

Characterizing The Response Of The Coastal Rio Grande To Upstream Damming, Timothy A. Goudge, John M. Swartz, Tian Y. Dong, David Mohrig

School of Earth, Environmental, & Marine Sciences Faculty Publications

Dams are major obstructions to the flow of water and the transport of sediment in rivers. Much work has shown the construction of dams, and storage of sediment in reservoirs, can lead to significant changes in the morphodynamic behavior of alluvial rivers; however, in most cases, the effect of damming has a finite downstream limit as sediment is supplied back to the river through channel bed/bank erosion and/or tributary inputs. Here we present a study of a natural experiment that isolates one source of sediment downstream of a dam – the lower Rio Grande, which has no major tributary inputs …

A Comparative Plague Study Of Cacao Fungal Disease In Cacao Pods Within Monocultures And Indigenous Agroforests In Ecuador’S Napo Province, Seamus Mccarthy

Independent Study Project (ISP) Collection

This study analyzes the composition of three major fungal diseases in Theobroma cacao fruits compared between monocultures and chakra agroforests in the Napo province of Ecuador with the goal of noting similarities and differences in the disease composition between the two systems, as well as investigate possible variation within this poorly understood category of agroforest to better structure future studies. Cacao pods on sampled trees were counted and fungal infections identified visually and by touch. Chakra systems were selected in the communities of Cinco de Enero and Seis de Marzo to the Southwest of Tena, Ecuador. Monoculture data was collected …

Regularity Theory Of Quasilinear Ellipitic And Parabolic Equations In The Heisenberg Group, Luca Capogna, Giovanna Citti, Xiao Zhong

Mathematics Sciences: Faculty Publications

This note provides a succinct survey of the existing literature concerning the H¨older regularity for the gradient of weak solutions of PDEs of the form modeled on the p-Laplacian in a domain Ω in the Heisenberg group Hⁿ, with 1 ≤ p < ∞, and of its parabolic counterpart. We present some open problems and outline some of the difficulties they present.

Tracking System Effectiveness For Texas Police Departments In Low-Income Communities, Jakob Scarcelli

Honors Theses

No abstract provided.

Sports Data Science Job Requirements, Cam E. Morse

Student Publications

Data science is an extremely fast growing field in which job opportunities are opening in every industry related to data science. Within the data science field is the sports data science industry which has it's own requirements and specificities that may not be present in other industries. In this paper, research is done using multiple job posting websites such as LinkedIn, Indeed, Sportstek jobs, and TeamworkOnline to explore the job descriptions of many different sports data science jobs. These job descriptions are then examined using Python coding to find the frequencies of specific data science skills in the various job …

Carbon Sequestration Capacities Of Different Land Cover Types And Climate Change, Nicole L. Melnick, Annabel Gorman, Adam F. Warren

Student Publications

Human-caused climate change creates a positive feedback loop that emits more carbon dioxide into the atmosphere instead of being sequestered in the Earth or its oceans. A major contributor to this feedback loop is deforestation in order to use land for agriculture and livestock. This study aims to investigate differences in carbon sequestration capabilities of forests, pastures, and cropland through soil and tree sampling in Gettysburg, Pennsylvania. The main hypothesis of this study is that forested land will be the most effective at carbon sequestration. The loss on ignition method (LOI) was used to determine the percent organic material in …

Individual-Level Responses To Rapid Climate Change In Common Terns (Sterna Hirundo) And Arctic Terns (Sterna Paradisaea), Kaiulani A. Sund

Student Publications

This study examines fine-scale environmental changes and intraspecific variation in the diet and foraging behavior of two seabirds in the Gulf of Maine, one of the fastest-warming regions of the ocean. This variation on the individual level, or behavioral plasticity, may help long-lived species to persist in rapidly changing environments. As the water warms, seabirds’ preferred prey (hake and herring) follow cooler waters deeper and farther offshore. It is unlikely that all individuals respond to changing food availability in the same way. For common terns (Sterna hirundo) and Arctic terns (Sterna paradisaea) breeding on Petit Manan …

One Man’S Trash: Duke Riley’S Archive And The Social Construction Of Garbage, Deirdre M. Sullivan

Student Publications

In a post-industrial society, Americans have to grapple with the result of seemingly endless production: trash. The amount of trash produced every day is a rising threat to the planet and its inhabitants; every decision made for the future must also take into account waste, rubbish, and refuse that will never break down or be fully removed from our waterways. Some artists, such as contemporary artist Duke Riley, have embraced the use of trash in their art as a critique of capitalism and consumerism. One of his most notable works is the Poly S. Tyrene Memorial Maritime Museum series, a …

Aesthetically Appealing Building Integrated Photovoltaic Systems For Net-Zero Energy Buildings. Current Status, Challenges, And Future Developments—A Review, Mohammad Khairul Basher, Mohammad Nur-E-Alam, Md Momtazur Rahman, Kamal Alameh, Steven Hinckley

Research outputs 2022 to 2026

With the sharp increase in global energy demand, industrial and residential buildings are responsible for around 40% of the energy consumed with most of this energy portion being generated by non-renewable sources, which significantly contribute to global warming and environmental hazards. The net-zero energy building (NZEB) concept attempts to solve the global warming issue, whereby a building will produce, on-site, its required energy demand throughout the year from renewable energy sources. This can be achieved by integrating photovoltaic (PV) building materials, called building-integrated photovoltaic (BIPV) modules, throughout the building skin, which simultaneously act as construction materials and energy generators. Currently, …

Influence Of Clay Content On Co2-Rock Interaction And Mineral-Trapping Capacity Of Sandstone Reservoirs, Emad A. Al-Khdheeawi, Doaa Saleh Mahdi, Yujie Yuan, Stefan Iglauer

Research outputs 2022 to 2026

The injection of carbon dioxide (CO2) is an essential technology for maximizing the potential of hydrocarbon reservoirs while reducing the impact of greenhouse gases. However, because of the complexity of this injection, there will be many different chemical reactions between the formation fluids and the rock minerals. This is related to the clay content of sandstone reservoirs, which are key storage targets. Clay content and clay types in sandstone can vary substantially, and the influence of these factors on reservoir-scale CO2-water-sandstone interactions has not been managed appropriately. Consequently, by simulating the process of CO2 injection in two different clay-content sandstones …

Grid Independence Studies Of Eddy-Resolving Models At The Scale Of A River Reach Along A Transect In Marble Canyon Of The Colorado River, Arizona, Rosa Elena España Urresty

Open Access Theses & Dissertations

This study presented a novel approach for evaluating the impact of changes in spatial resolution on field-scale models to identify turbulent flow patterns in hydraulic features in canyon-bound rivers. The methodological framework incorporated seven different computational domain resolutions to analyze the sensitivity of field-scale models to spatial resolution changes by employing techniques such as turbulent kinetic energy spectrum, spatiotemporal analysis of eddy structures, divergent Kullback-Leibler (KL) divergence, Nash-Sutcliffe (NS) model efficiency coefficient, wavelet power spectrum, and GCI calculation. Statistical and physical-based skill metrics are employed to quantifying information loss to evaluate a set of domain resolutions. Grid independence studies have …

Wernicke's Encephalopathy: Mapping The Risk Factors Throughout The State Of South Carolina, Shannon M. Rychener

Senior Theses

Wernicke’s Encephalopathy is a consistently underrecognized neurodegenerative brain disorder resulting from prolonged thiamine deficiency. Clinical presentation of the disease results from brain lesions attributable to thiamine deficiency. Because these lesions occur in various locations in the cerebral cortex, symptoms can vary significantly. Varied presentation of symptoms, in addition to the lack of a widely accepted biomarker for the disorder cause challenges to clinicians when identifying and diagnosing the disorder. Due to these challenges, healthcare providers must heavily rely on patient history and risk factor prevalence when multiple symptoms of the disorder are present. By mapping the prevalence of the four …

Assessing The Impact Of The Covid-19 Pandemic On Project Management Methodologies, Adrian Leung

LMU Theses and Dissertations

This research paper explores the impact of COVID-19 and the shift to remote work on project management practices across multiple industries. Through interviews with project managers, the study finds that companies with pre-existing remote work policies were better equipped to handle the transition to remote work. In contrast, companies without pre-existing policies faced increased challenges in communication, team morale, and workload management. The study also highlights the struggle to maintain work-life balance, the importance of communication, and the need to address technical difficulties. Project managers emphasized the importance of accountability and maintaining productivity during remote work. Overall, the study finds …