Physical Sciences and Mathematics Commons^™

Identifying Genes Influencing The Efficiency Of Photosynthesis, Jason M. Rivera, Steven Burgess

PRECS student projects

• Photosynthesis adapts to environmental conditions over time.¹

• Varying environmental conditions lead to stress accumulation on the plant.²

• A genetic library has been assembled for forward genetic screening of Arabidopsis thaliana.³

• Arabidopsis Thaliana is a model plant used as a model organism in growth experiments.

• This research project aims to identify and analyze candidate genes that impact the efficiency of photosynthesis.

• These genes can be transplanted into commercial crops to increase efficiency of photosynthesis and crop yields.

Confirming Presence And Mobilization Of Partner Quality Genes In Sinorhizobium Meliloti, Ethan Perez, Ivan Sosa Marquez, Katy Heath

PRECS student projects

• Mutualism is an interaction in which two organisms benefit from each other.
• The symbiotic relationship between the bacterium Sinorhizobium meliloti and the plant Medicago truncatula is dictated by the bacterial plasmids.
• The Heath lab has a collection of 191 Sinorhizobium meliloti strains with different symbiotic plasmids that vary across populations (Riley et al., 2022).
• Each strain can be a better or worse partner for its plant host in symbiosis with the variation in fitness being called partner quality (Fig. 1)
• These traits can be traced back to the genetic elements that underlie this effect (Batstone et al.,
• These genetic elements …

Fusarium Isolates Adapt To Specific Wheat Tissues, Liam Kent, Mara Krone, Santiago Mideros

PRECS student projects

Introduction

Tissue specificity is a pathogen’s preference for infecting one section of tissue (i.e., root, stem, or head) over another. 1 Having a better understanding of a pathogen’s ability to cause disease on specific tissues could contribute to new mechanisms of disease control. This will allow growers to make the best decision on effective pathogen management. In 2022, Fusarium isolates were collected from wheat heads and roots across Illinois. These isolates were used in a pathogen aggressiveness assay on wheat roots, in an in vitro growth rate experiment , and in the development of a spore quantification protocol. The phenotypic …

Role Of Age And Sex In The Effects Of Repeated Methamphetamine Exposure On Hedonic Tone In Sprague Dawley Rats, Cameron Lewis, Conor Strumberger, Joshua M. Gulley

PRECS student projects

Anhedonia is defined as a reduced or complete loss of pleasure from a previously pleasurable stimulus, and it is comprised of two dimensions:

• Hedonic anhedonia consists of a distinct loss of pleasure in consumption of a normally pleasurable stimulus.
• Motivational anhedonia involves the goal directed behavior to obtain a reward.

Withdrawal induced anhedonia following use of methamphetamine (METH) is thought to contribute to relapse behaviors^1,2 . The anhedonic effects of drug withdrawal largely depend on dose, frequency, and the duration of drug exposure^4,5,6.

The role of sex and age of exposure in this context has yet to …

Acth Challenge: Stress Response Across Tadpole Development, Lauren W. Mobo, Lucas Jimenez, Lisa L. Surber-Cunningham, Eva K. Fischer

PRECS student projects

Research Questions

1. Do tadpoles excrete more cortisol or corticosterone?
2. Do tadpoles excrete more corticosterone after ACTH injections?
3. Does the ACTH stress response change across development?

The Tomato Strikes Back: Plant Response To Environmental Stress, Maya K. Davis, Erinn Dady, Esther N. Ngumbi

PRECS student projects

Introduction

• Tomato is an important vegetable. Its production is threatened due to altered weather patterns which increase environmental stressors such as flooding^{1, 2} and herbivory³ to crops.
• Plants respond in many ways. Stressed plants strike back to environmental stress by altering their chemistry⁴:

1. Volatile Organic Compounds (VOCs) emissions
2. Defensive secondary metabolites²

• Stress induced physiological changes in plants impact growth and development of insects.
• This study is broken into two experiments:

1. The plant response to flooding stress
2. The insect performance on flooded plants

Potential Implications Of Elevated Co2 For Enhanced Rock Weathering In Croplands, Hannah Maher, Megan Allen, Lisa Ainsworth

PRECS student projects

• Atmospheric carbon dioxide (CO₂) levels are increasing by 2.37 ppm year, and levels have increased from about 370 ppm in 2000 to about 420 ppm in 2023¹
• Increased CO₂ levels result in climate change, including increased temperatures and drought which impacts soybean crops
• Enhanced Rock Weathering (ERW) is the process of spreading basalt on fields to accelerate the natural reaction between rocks, CO2, and water²
• Enhanced Rock Weathering is a possible way to combat increasing CO₂ levels because of its carbon sequestration properties²

Revisiting The Reproductive Behaviors Of Blackspotted Stickleback, Cassidy Constant, Megan Tucker, Colby Behrens, Alison M. Bell

PRECS student projects

Why Blackspotted Stickleback?

How Behaviors Evolve Comparing closely related species can give insights into how behavior evolves.

Well studied: Three-spined Stickleback (Gasterosteus aculeatus)

• Model organism for natural variation in behavioral evolution 1.
• Divergence in parental care in two ecotypes1,2.
• White and common ecotypes recently diverged 2.

Lesser studied: Blackspotted Stickleback (Gasterosteus wheatlandi)

• Three-spined’s closest living relative.
• Possible behavioral intermediate of commons & whites.
• Blackspotted egg dispersal is similar to white three-spined 3.

How Fungicide Alters The Hidden Mycobiome Of A Restored Prairie System, Mya Reyes, Noah Brown, Anthony Yannarell

PRECS student projects

• Fungal Endophytes are microscopic fungi that live inside plant tissues and form a symbiotic relationship that influences the fitness of both parties.

• Fungicides are a widely used method of crop disease control in agriculture, but fungicides can be carried into other environments by water and wind.

• This experiment looks at how long-term fungicide exposure affects diversity of fungal endophytes that are grown in vitro as well as screens them for phosphate solubilization ability.

• Phosphate is a vital macronutrient that is essential for making nucleic acids (DNA, RNA) as well as playing a vital role in energy transfer throughout the plant's …

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Critical Workforce Skills For Bachelor-Level Geoscientists: An Analysis Of Geoscience Job Advertisements, G. W. Shafer, K. Viskupic, A. E. Egger

Geosciences Faculty Publications and Presentations

Understanding the skills bachelor-level geoscientists need to enter the workforce is critical to their success. The goal of this study was to identify the workforce skills that are most requested from a broad range of geoscience employers. We collected 3668 job advertisements for bachelor-level geoscientists and used a case-insensitive, code-matching function in Matlab to determine the skills geoscience employers seek. Written communication (67%), field skills (63%), planning (53%), and driving (51%) were most frequently requested. Field skills and data collection were frequently found together in the ads. Written communication skills were common regardless of occupation. Quantitative skills were requested less …

Tectonomagmatic Evolution Of Southwestern Laurentia: Insights From Zircon U-Pb Geochronology And Hafnium Isotopic Composition Of The Red Bluff Granite Suite, West Texas, Usa, Munazzam Ali Mahar, Philip C. Goodell, Jason W. Ricketts, Eric J. Kappus, James L. Crowley, Anthony M. Alvarez

Geosciences Faculty Publications and Presentations

We provide laser ablation–multicollector–inductively coupled plasma–mass spectrometry (LA-MC-ICP-MS) and high-precision chemical abrasion–isotope dilution–thermal ionization mass spectrometry (CA-ID-TIMS) U-Pb ages and Hf isotopic compositions of zircons from the Red Bluff Granite Suite and mafic dikes in the Franklin Mountains of El Paso, Texas, USA. Granitoids exposed in the Franklin Mountains were previously divided into five magmatic stages based on cross-cutting relationships. Major and trace element compositions showed that these granitoids are ferroan, alkaline, and A2 type. Homogeneity in the whole-rock geochemistry suggests that the granite stages are genetically related and share similar petrogenetic histories. Weighted mean zircon ²⁰⁶Pb/²³⁸U …

Advances In Our Understanding Of Pyroclastic Current Behavior From The 1980 Eruption Sequence Of Mount St. Helens Volcano (Washington), Usa, Brittany D. Brand, Aaron A. Marshall

Geosciences Faculty Publications and Presentations

This review summarizes what the volcanology community has learned thus far from studying the deposits of pyroclastic currents (PCs) from the 1980 eruption sequence at Mount St. Helens. The review includes mass flow events during the May 18 eruption, including the lateral blast, the afternoon column collapse and boil-over PC activity, and some aspects of the debris avalanche. We also include a summary of PCs generated in the smaller eruptions following the climactic May 18 event. Our objective is to summarize the state of our understanding of PC transport and emplacement mechanisms from the combination of field and laboratory observations, …

Human Population Growth And Accessibility From Cities Shape Rangeland Condition In The American West, Juan M. Requena-Mullor, Jodi Brandt, Matthew A. Williamson, T. Trevor Caughlin

Human-Environment Systems Research Center Faculty Publications and Presentations

Drylands cover 40 % of the global land surface and more than 3 billion people worldwide are dependent on the ecosystem services (ES) that they provide (Hoover et al., 2020). Dryland ecosystems are subject to multiple forces of change, including climate change, invasive plants, and increasing wildfires (Maestre et al., 2016). For example, human pressure and land use intensification can quickly induce changes in healthy drylands that lead to degradation, thus reducing their capacity to recover from extreme climate events (Gunderson, 2000, Sun et al., 2021). We define degradation as a transition from a functional native ecosystem to an undesired …

Evaluating The On-Site Impacts Of The Ambatovy Project Through The Lens Of Environmental Justice, Nick Karlik

Independent Study Project (ISP) Collection

In Madagascar, sustainable development has been established and maintained by dominant foreign actors to reconcile neoliberalism with globalized conceptions of environmental protection. The Ambatovy mining and refining project has emerged as a prominent example of this developmental mode; Ambatovy is the largest economic enterprise in the history of the country and one of the largest and most productive mining operations in the world, generating billions of dollars in revenue for a country that remains among the poorest in the world while offsetting its impact on endemic biodiversity and forest habitat through conservation initiatives. At the same time, the evaluative framework …

A Comparative Life Cycle Assessment Of Cork Versus Traditional Shoe Insole Material, Alexandra Lum

Independent Study Project (ISP) Collection

Shoes are conventionally produced from materials like plastic or rubber that have detrimental impacts on the environment such as exacerbating existing waste accumulation, increasing global amounts of greenhouse gasses, or releasing toxic chemicals into soils and groundwater. These impacts have pushed footwear companies to introduce more sustainable and ecologically-friendly materials in their products. Roughly half of all cork production occurs in Portugal. The present work employs a comparative life cycle assessment approach between traditional plastic and rubber insole material and cork insole material to investigate the environmental impact of each. Results show that during each stage of the insole life …

Women In Sustainable Leadership: A Case Study On The Perspectives, Opportunities, And Challenges Of Biologist And Conservationist Estrela Matilde, Ella Lyons

Independent Study Project (ISP) Collection

Despite the relatively small population of 8,000 occupants and the minimal international recognition of the Island of Príncipe, located off of the Gulf of Guinea on the Western Coast of Central Africa, the region has increasingly become a leading example of sustainable practices to be taken on a global scale in the near future to combat our current climate crisis. This case study explores the sustainable practices that Príncipe has learned to embrace under the leadership of Portuguese conservation biologist and project manager for the NGO Fundação Príncipe, Estrela Matilde. Estrela integrates social, cultural, and environmental conservation to align with …

Unleash The Heat: Exploring Geothermal Energy Perspectives And Energy Literacy In São Miguel, Azores, Lena Mcdonough

Independent Study Project (ISP) Collection

The green energy transition is moving ahead in EU countries at very different paces, and there are some key challenges that all regions currently face in trying to phase fossil fuels out of their energy mixes. One of these challenges is that most regions simply cannot harness enough renewable energy sources and simultaneously have the storage technology for creating a baseload power source as reliable as oil, coal and natural gas. That is, unless you sit in the middle of the Atlantic Ocean on the boundary of three tectonic plates, with a continuous and reliable renewable energy source beneath your …

People Power & Politics: Evaluating The Impact Of The Conselho De Cidadãos De Lisboa On Climate Policy And Political Efficacy In Lisbon, Marion Linde

Independent Study Project (ISP) Collection

As the social and ecological effects of climate change intensify, governments across the globe must evaluate how best to deal with the climate crisis. Likewise, increasing citizen participation in decision-making processes has been a key strategy for dealing with such issues. Theories on the benefits of citizen participation inform real practices such as democratic mini-publics and citizens assemblies. In Lisbon, Portugal, the Câmara Municipal de Lisboa implemented the first edition of the Conselho de Cidadãos de Lisboa (CCL) in May 2022. The CCL is a citizens assembly designed to directly involve residents in city policy-making, with the first edition focusing …

Wishing For Water While Fleeing Their Farms: A Study Of Water Scarcity And Internal Migration In Tunisia, Tyler Rak

Independent Study Project (ISP) Collection

How does water scarcity and limited water access impact internal migration? I argue that water scarcity and limited access to water is likely to increase internal migration in Tunisia. The mechanism through which I will investigate this relationship is in the agricultural sector. In this research, I found that water scarcity does exist in Tunisia and that scarcity impacts the economy, employment, and perceptions of rural areas in Tunisia. This, in turn, likely contributes to internal migration, although my research could not conclude whether water scarcity acts a causative factor to internal migration. This topic has become more prevalent than …

Neoliberalismo Y La Mar: Los Efectos Del Sistema Neoliberal Y La Pesca Artesanal De Caleta Portales, Isaac Bronfine

Independent Study Project (ISP) Collection

This study is meant to explore the fundamental conflict between the neoliberal system implemented in Chilean society and the artisanal fishing sector, represented by Caleta Diego Portales in Valparaíso, Chile. The struggle of the artisanal fishing sector has been made more salient in the minds of the general Chilean public due to the estallido social or “social explosion” in 2019 which lead to a process of drafting a new constitution, and the recent corruption scandals regarding government officials and fishing law reforms.

Beginning with how neoliberal theory gained traction in intellectual spaces around the world, this study then examines how …

Hydrological Patterns Of The Chimborazo Reserve: Streamflow, Climate, And Glacier Recession Data Show A Loss Of Glacial Influence On The Southwestern Aspect Of The Chimborazo Volcano, Ecuador., William F. M. Patrick

Independent Study Project (ISP) Collection

The Chimborazo volcano of the central Ecuadorian Andean Cordillera (6310 m) has been shown to currently be undergoing extreme glacial recession due to climate change. For this reason, this study sought to analyze climate and glacier recession data in conjunction with streamflow from kryal (glacial-fed), rhithral (non-glacial-fed), and intermediate streams to not only evaluate the current health of Chimborazo’s glaciers, but also determine how hydrology in the region will respond to future climate change. The rate of glacial recession on the volcano was determined using satellite imagery between 1965 and 2019. Measurements of stream elevation, pH, water temperature, width, depth, …

A Transition Point: The Role Of The Global Power Shift In Facilitating Saudi Internal Reforms, Aidan Aguilar

Independent Study Project (ISP) Collection

The increasing political and economic influence of China represents a pivotal point within international relations. This paper aims to explore the implications of this global power shift on Saudi Arabia’s attempted economic reforms. The Kingdom’s reliance on oil has created an unsustainable economic model, and this model is intrinsically linked to Saudi Arabia’s relationship with the United States. Its growing relationship with China could create change. As such, this paper analyzes the intersection of economics and security in relation to the Saudi Vision 2030. I argue that, not only does China serve as an important source of the investment necessary …

Tropical Tree Carbon Storage At Drago Dos Forest In Boca Del Drago, Panama, Ben Dwyer

Independent Study Project (ISP) Collection

Currently, anthropogenic carbon emissions pose a significant, global threat, contributing to Global Warming and Climate Change (CC). Today, the most effective carbon sinks are natural. Trees are highly effective carbon sinks that sequester large amounts of atmospheric carbon dioxide (CO2), most greatly in tropical areas. However, tropical tree carbon storage needs to be more accurately estimated to provide valuable information toward mitigating CC and its negative environmental effects. This study aimed to estimate CO2 sequestration at a tropical forest in Boca Del Drago, Panama, and compare it to that of a nearby mangrove forest. It was hypothesized that the tropical …

Variation In The Growth Parameters And Biomass Of Rhizophora Mangle Seedlings With Distances From Playa Estrella, Bocas Del Toro, Panama, Thiny Tep

Independent Study Project (ISP) Collection

Mangrove is a salt-tolerant, intertidal, tropical tree or shrub and make up a rich community of various organism. On the Caribbean coast of Panama, in Bocas del Toro, mangrove forests cover 28 km² and are dominated by R. mangle, followed by L. racemosa and A. germinans. Simultaneously, Isla Colón, the most populated and developed among all islands in the Bocas del Toro Archipelago, is a tourist center. Unfortunately, tourism comes at the price of environmental degradation via alteration of natural habitats, solid and wastewater pollution. Therefore, this study aims to gain a preliminary understanding on how the …

Anuran Species Diversity And Abundance Between Three Locations In El Valle De Antón, Coclé, Panamá, Xena Gehring

Independent Study Project (ISP) Collection

Panama is an incredibly biodiverse country that houses 230 species of amphibians including 188 species of frogs, 35 of which are endemic to Panama. Commonly found in terrestrial and aquatic habitats, frogs play a very important role in the regulation of insect populations and serve as a valuable food resource to other predators. The greatest threat to amphibian species at this time is Chytridiomycosis, a fungal pathogen that infects the skin and often results in death. Many species of amphibians have already gone completely extinct or are extinct in the wild due to the proliferation of this disease. The skin …

Rocky Intertidal Community Structure Along An Upwelling Gradient Between Playa Venao And Nueva Gorgona On Panama’S Pacific Coast, Claire Brady

Independent Study Project (ISP) Collection

Ecological research on rocky intertidal ecosystems has increasingly focused on the regional oceanographic processes that shape community structure over functional group interactions. Intertidal communities’ dependence on onshore and offshore transport of intertidal species larvae, dissolved inorganic nutrients, and phytoplankton signal that upwelling and nearshore currents can have an influential role in determining the growth and composition of intertidal systems. The community structure of rocky intertidal areas was compared between two locations along an upwelling gradient in the Gulf of Panama: Nueva Gorgona, with intermittent seasonal upwelling, and Playa Venao, with fringe seasonal upwelling. The surface cover of algae, barnacles, and …

Troop Composition And Behavior Of Mantled Howler Monkeys (Alouatta Palliata) In Mangroves And Forested Islands South Of David, Panama, Slate Hyacinthe

Independent Study Project (ISP) Collection

The mantled howler monkey, Alouatta palliata, is one of the most commonly studied and widely distributed primate species in Central America. They have been reported to inhabit mangrove environments in Panama, but few studies have undertaken to describe their demography and behavior in these particular ecosystems. For my study, I spent 12 days studying A. palliata populations in both the mangrove and forested island ecosystems (Isla Parida and Isla Boca Brava) south of David. Seven groups were found in the mangrove environments, and 11 groups were found on the island environments. The mangrove groups were significantly smaller and at a …

Understanding Invasive Predation: Detections Of Feral Cats (Felis Catus) On Kangaroo Island’S Western River Refuge, Leah Boget

Independent Study Project (ISP) Collection

Feral cats (Felis catus) are a priority-level threat for small to medium-sized native vertebrates across Australia and especially so in insular environments like that of Kangaroo Island, South Australia. The island is home to several endangered and geographically restricted species, including the Kangaroo Island Dunnart (Sminthopsis aitkeni), an endangered marsupial endemic to Kangaroo Island. When bushfires spread across the island and burned x percent of native vegetation in late 2019 to early 2020, these populations were critically impacted and post-fire feral cat predation on the island risked their extinctions, motivating the creation of a refuge with …

Agroforestry For The Future: Motivations Behind Tasmanian Farmers Planting Trees, Josh Lipp

Independent Study Project (ISP) Collection

Agroforestry is the act of combining farming and tree planting, and many Tasmanian farmers are starting to plant trees on their properties for multiple reasons. Through conducting 9 interviews with farmers and researchers and visiting field sites, 3 main themes were identified to answer the question: why are Tasmanian farmers planting trees, and what are the benefits and downsides to agroforestry? Interviews help us understand farmers’ perceptions of agroforestry, and field data collection will prove the benefits of agroforestry in the future. Tasmania was chosen as the location of study as it is a state in Australia that largely focuses …

Impact Of Wildlife Provisioning On Species Diversity, Relative Frequency, And Richness In New South Wales, Alanah Cohen-Tigör

Independent Study Project (ISP) Collection

Wildlife provisioning and camera trapping are two recently evolving methods of conservation and wildlife management, aimed at protecting animals in the face of ever worsening climate change. Habitats are being destroyed by climate disruption, decreasing species diversity and abundance worldwide. It is imperative that methods of protecting species are developed to slow or reverse this era of extinction. By providing supplementary food and water to ecological communities, the hope is that species will have improved survivorship and reproduction, making them more resilient and resistant to population decline. Camera trapping is product of modern technology, allowing researchers to monitor species without …