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Articles 18511 - 18540 of 291692

Full-Text Articles in Physical Sciences and Mathematics

5g-Practical Byzantine Fault Tolerance: An Improved Pbft Consensus Algorithm For The 5g Network, Xin Liu, Xing Fan, Baoning Niu, Xianrong Zheng Jan 2025

5g-Practical Byzantine Fault Tolerance: An Improved Pbft Consensus Algorithm For The 5g Network, Xin Liu, Xing Fan, Baoning Niu, Xianrong Zheng

Information Technology & Decision Sciences Faculty Publications

The consensus algorithm is the core technology of blockchain systems to maintain data consistency, and its performance directly affects the efficiency and security of the whole system. Practical Byzantine Fault Tolerance (PBFT) plays a crucial role in blockchain consensus algorithms by providing a robust mechanism to achieve fault-tolerant and deterministic consensus in distributed networks. With the development of 5G network technology, its features of high bandwidth, low latency, and high reliability provide a new approach for consensus algorithm optimization. To take advantage of the features of the 5G network, this paper proposes 5G-PBFT, which is an improved practical Byzantine fault-tolerant …


Towards Dynamic Learner State: Orchestrating Ai Agents And Workplace Performance Via The Model Context Protocol, Mohan Yang, Nolan Lovett, Belle Li, Zhen Hou Jan 2025

Towards Dynamic Learner State: Orchestrating Ai Agents And Workplace Performance Via The Model Context Protocol, Mohan Yang, Nolan Lovett, Belle Li, Zhen Hou

Educational Leadership & Workforce Development Faculty Publications

Current learning and development approaches often struggle to capture dynamic individual capabilities, particularly the skills they acquire informally every day on the job. This dynamic creates a significant gap between what traditional models think people know and their actual performance, leading to an incomplete and often outdated understanding of how ready the workforce truly is, which can hinder organizational adaptability in rapidly evolving environments. This paper proposes a novel dynamic learner-state ecosystem—an AI-driven solution designed to bridge this gap. Our approach leverages specialized AI agents, orchestrated via the Model Context Protocol (MCP), to continuously track and evolve an individual’s multi-dimensional …


Feel Bad To Discard A Fashion Product: How Ai Designers Influence Individuals' Sustainable Consumption, Ha Kyung Lee, Dooyoung Choi Jan 2025

Feel Bad To Discard A Fashion Product: How Ai Designers Influence Individuals' Sustainable Consumption, Ha Kyung Lee, Dooyoung Choi

Educational Leadership & Workforce Development Faculty Publications

This study explores how AI technology in fashion design influences consumers' sustainable consumption behaviors, focusing on emotional attachment to products. By comparing AI-generated and human-designed fashion items, the study examines how designer type impacts negative emotions about discarding products, mediated by emotional attachment. Results from two experimental studies reveal that designer type significantly affects negative emotions toward discarding human-designed items, but emotional attachment was not influenced by designer type in the first study. This lack of difference may be due to personal characteristics that moderate the effect. The second study found that individuals who perceive AI as human-like form stronger …


Exploring The Impact Of Value Co-Creation Through Ai-Driven Chatbbots On Customer Repeat Purchases, Dooyoung Choi, Jaeha Lee Jan 2025

Exploring The Impact Of Value Co-Creation Through Ai-Driven Chatbbots On Customer Repeat Purchases, Dooyoung Choi, Jaeha Lee

Educational Leadership & Workforce Development Faculty Publications

Drawing on the Stimulus-Organism-Response (S-O-R) framework, this study explores how perceived value co-creation during chatbot interactions influences customer repeat purchase intentions through cognitive, emotional, and social responses to chatbots. A survey of 220 participants revealed that perceived value co-creation significantly affected repeat purchase intentions, with cognitive evaluations, emotional reactions, and social value serving as key mediators. However, the direct effect of value co-creation on purchase intentions was not significant. The findings suggest that while value co-creation enhances consumer engagement, repeat purchases occur only when consumers experience positive cognitive, emotional, and social outcomes. Therefore, it is crucial for retailers to incorporate …


Examining Teaching Competencies And Challenges While Integrating Artificial Intelligence In Higher Education, Xinyue Ren, Min Lun Wu Jan 2025

Examining Teaching Competencies And Challenges While Integrating Artificial Intelligence In Higher Education, Xinyue Ren, Min Lun Wu

STEMPS Faculty Publications

The rapid development of artificial intelligence (AI) technologies has demonstrated their affordances and limitations in revolutionizing pedagogical strategies in higher education. Given the lack of guidelines, policies, and resources to assist instructors in efficiently and ethically integrating AI into teaching and learning practices, this systematic review aimed to investigate AI integration competencies and challenges in higher education from the intelligent Technological Pedagogical Content Knowledge (TPACK) perspective. We first applied the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) to identify 23 studies published between 2019 and 2023 that met the inclusion and exclusion criteria. After conducting open coding and …


Advancing Pedagogical And Instructional Design Through Artificial Intelligence (Ai) In Education And Training Contexts, Mohan Yang, Jewoong Moon, Tian Luo, Jinhee Kim Jan 2025

Advancing Pedagogical And Instructional Design Through Artificial Intelligence (Ai) In Education And Training Contexts, Mohan Yang, Jewoong Moon, Tian Luo, Jinhee Kim

STEMPS Faculty Publications

[Introduction] "The only way to discover the limits of the possible is to go beyond them into the impossible." - Arthur C. Clarke

It is our pleasure and honor as guest editors for this special issue of the Journal of Applied Instructional Design (JAID) to present "Advancing Pedagogical and Instructional Design through Artificial Intelligence (AI) in Education and Training Contexts." This issue arrives at a truly timely moment, as the rapid and continuous development of generative artificial intelligence (GenAI) is fundamentally reshaping the traditional paradigms of teaching, learning, and training.


Analysing Nontraditional Students' Chatgpt Interaction, Engagement, Self-Efficacy And Performance: A Mixed-Methods Approach, Mohan Yang, Shiyan Jiang, Belle Li, Kristin Herman, Tian Luo, Shanan Chappell Moots, Nolan Lovett Jan 2025

Analysing Nontraditional Students' Chatgpt Interaction, Engagement, Self-Efficacy And Performance: A Mixed-Methods Approach, Mohan Yang, Shiyan Jiang, Belle Li, Kristin Herman, Tian Luo, Shanan Chappell Moots, Nolan Lovett

STEMPS Faculty Publications

Generative artificial intelligence brings opportunities and unique challenges to nontraditional higher education students, stemming, in part, from the experience of the digital divide. Providing access and practice is critical to bridge this divide and equip students with needed digital competencies. This mixed-methods study investigated how nontraditional higher education students interact with ChatGPT in multiple courses and examined relationships between ChatGPT interactions, engagement, self-efficacy and performance. Data were collected from 73 undergraduate and graduate students through chat logs, course reflections and artefacts, surveys and interviews. ChatGPT interactions were analysed using four metrics: prompt number, depth of knowledge (DoK), prompt relevance and …


Seasonality Of Submarine Groundwater Discharge Pathways In A Coastal Lagoon Revealed By Radium Isotopes: The Importance Of Porewater Exchange In Summer, Júlia Rodriguez-Puig, Valentí Rodellas, Marc Diego-Feliu, Andres Alcolea, Joaquín Jiménez-Martínez, Irene Alorda-Montiel, Aaron Alorda-Kleinglass, Francisco Pereira, Marisol Manzano, Javier Gilabert, Jordi Garcia-Orellana Jan 2025

Seasonality Of Submarine Groundwater Discharge Pathways In A Coastal Lagoon Revealed By Radium Isotopes: The Importance Of Porewater Exchange In Summer, Júlia Rodriguez-Puig, Valentí Rodellas, Marc Diego-Feliu, Andres Alcolea, Joaquín Jiménez-Martínez, Irene Alorda-Montiel, Aaron Alorda-Kleinglass, Francisco Pereira, Marisol Manzano, Javier Gilabert, Jordi Garcia-Orellana

OES Faculty Publications

Chemical fluxes supplied by Submarine Groundwater Discharge (SGD) can be relevant for coastal ecosystems, particularly lagoonal environments. An appropriate understanding of SGD requires constraining the magnitude and composition of its different pathways. However, the evaluation of SGD pathways is often limited to independent estimations, lacking a comprehensive understanding of the groundwater processes at play. In this study, we combined a Ra mass balance and hydrogeological modeling to simultaneously estimate different SGD pathways flowing into a coastal lagoon. We assessed water fluxes derived from fresh SGD, long-scale recirculation of seawater, and porewater exchange (PEX) into Mar Menor, a highly anthropized coastal …


Atmospheric Chemistry Experiment (Ace) Winds, Matthew Wyatt, Peter F. Bernath, Chris Boone, Léo Lavy, Ryan Johnson Jan 2025

Atmospheric Chemistry Experiment (Ace) Winds, Matthew Wyatt, Peter F. Bernath, Chris Boone, Léo Lavy, Ryan Johnson

Chemistry & Biochemistry Faculty Publications

The Atmospheric Chemistry Experiment Fourier Transform Spectrometer (ACE-FTS) uses limb geometry to measure transmittance spectra of Earth's atmosphere by solar occultation. Line-of-sight wind speeds can be derived via Doppler shifts of molecular lines in infrared spectra. The wind look direction angles relative to geodetic North are derived from geometry. We validate the new ACE version 5.3 (v.5.3) line-of-sight winds with MIGHTI and meteor radar vector wind observations and find a ±15 m/s sunrise/sunset shift above 80 km. We also compare line-of-sight winds from ACE-FTS v.5.2 and v.5.3 with vector winds from the MERRA-2, HWM14, and WACCM-X models. A ±15 m/s …


Evaluating The Chemical Reactivity Of Wildfire-Derived Dissolved Organic Molecules: Glutathione Binding Through Kendrick Mass Defect Analysis, Hannah M. Hamontree, Patrick G. Hatcher Jan 2025

Evaluating The Chemical Reactivity Of Wildfire-Derived Dissolved Organic Molecules: Glutathione Binding Through Kendrick Mass Defect Analysis, Hannah M. Hamontree, Patrick G. Hatcher

Chemistry & Biochemistry Faculty Publications

The emerging risks to organisms of pyrogenic-derived dissolved organic matter (PyDOM) from forest fires are of concern due to its toxic and mutagenic potential (e.g., pro-oxidative responses in fauna through the depletion of glutathione, a nitrogen- and sulfur-containing tripeptide found in cells). This study simulates this phenomenon in a laboratory setting by identifying bonding between reduced l-glutathione and organic molecules in leachates from environmentally weathered biomass samples (charred and uncharred) using Kendrick Mass Defect (KMD) analysis from formula lists obtained from negative-mode electrospray ionization-Fourier transform-ion cyclotron resonance-mass spectrometry ((-)ESI-FT-ICR-MS). These formula lists reveal a 10-fold increase in nitrogen- and sulfur-containing …


The Importance Of Atomic Charges For Predicting Site-Selective Ir-, Ru-, And Rh-Catalyzed C-H Borylations, Shannon M. Stephens, Kyle M. Lambert Jan 2025

The Importance Of Atomic Charges For Predicting Site-Selective Ir-, Ru-, And Rh-Catalyzed C-H Borylations, Shannon M. Stephens, Kyle M. Lambert

Chemistry & Biochemistry Faculty Publications

A supervised machine learning model has been developed that allows for the prediction of site selectivity in late-stage C-H borylations. Model development was accomplished using literature data for the site-selective (≥95%) C-H borylation of 189 unique arene, heteroarene, and aliphatic substrates that feature a total of 971 possible sp² or sp³ C-H borylation sites. The reported experimental data was supplemented with additional chemoinformatic descriptors, computed atomic charges at the C-H borylation sites, and data from parameterization of catalytically active tris-boryl complexes resulting from the combination of seven different Ir-, Ru-, and Rh-based precatalysts with eight different ligands. Of the over …


Challenges Associated With Pfas Detection Method In Africa, Abdullahi Tunde Aborode, Ridwan Olamilekan Adesola, Ibrahim Idris, Waheed Sakariyau Adio, Segun Olapade, Gladys Oluwafisayo, Israel Ayobami Onifade, Sodiq Fakorede, Taiwo Bakare-Abidola, Jelil Olaoye, Adedeji Daniel Ogunyemi, Oluwaseun Adeolu Ogundijo, Olamilekan Gabriel Banwo, Adetolase Azizat Bakre, Peter Oladoye, Grace Adegoye, Noimat Abeni Jinadu Jan 2025

Challenges Associated With Pfas Detection Method In Africa, Abdullahi Tunde Aborode, Ridwan Olamilekan Adesola, Ibrahim Idris, Waheed Sakariyau Adio, Segun Olapade, Gladys Oluwafisayo, Israel Ayobami Onifade, Sodiq Fakorede, Taiwo Bakare-Abidola, Jelil Olaoye, Adedeji Daniel Ogunyemi, Oluwaseun Adeolu Ogundijo, Olamilekan Gabriel Banwo, Adetolase Azizat Bakre, Peter Oladoye, Grace Adegoye, Noimat Abeni Jinadu

Chemistry & Biochemistry Faculty Publications

Per- and polyfluoroalkyl substances (PFAS) are a group of man-made chemicals that are widely present in many industries. Monitoring and analyzing PFAS in Africa is challenging due to the limited availability of mass spectrometry (MS), which is an essential technique for detecting PFAS. This review assesses the scope and impact of the shortage of mass spectrometry instruments in Africa, emphasizing the resulting limitations in monitoring environmental and public health threats. The review analyzes the existing PFAS monitoring, the accessibility of MS instruments, and the technical capabilities within the continent. This study suggests that fewer African countries have sufficient MS instruments, …


Nucleotide-Derived Bacterial Alarmones Attenuate The Induction Of Type-I Interferon Responses In A Murine Macrophage Reporter Cell Line, Ryan P. Kilduff, Erin B. Purcell, Lisa M. Shollenberger Jan 2025

Nucleotide-Derived Bacterial Alarmones Attenuate The Induction Of Type-I Interferon Responses In A Murine Macrophage Reporter Cell Line, Ryan P. Kilduff, Erin B. Purcell, Lisa M. Shollenberger

Chemistry & Biochemistry Faculty Publications

The stringent response is a well-studied phenomenon in many bacterial systems and regulates resource-consuming activities such as transcription, translation, and replication. The stringent response is a well-conserved signaling framework, as are the nucleotide-derived signaling mediators, collectively referred to as (p)ppGpp or as alarmones. There is a wealth of research evaluating nucleotide-derived alarmone signaling in bacterial models, however, their potential to modulate innate immune signaling has not yet been evaluated. Several common pathogen-synthesized molecules, such as lipopolysaccharide (LPS) and cyclic-di-AMP (c-di-AMP), act as pathogen-associated molecular patterns (PAMPs), which are common patterns that alert the innate immune system of bacterial infection. The …


Green Chelation Strategy For Deashing Of Algal Biomass, Agyare Asante, George Daramola, Ryan W. Davis, Sandeep Kumar Jan 2025

Green Chelation Strategy For Deashing Of Algal Biomass, Agyare Asante, George Daramola, Ryan W. Davis, Sandeep Kumar

Civil & Environmental Engineering Faculty Publications

This study investigated a green chelation strategy for deashing algal biomass using nitrilotriacetic acid (NTA) and deionized water (DI) to enhance its suitability for biofuel and bioproduct applications. Solid-state algal turf scrubber (SS ATS), green algal turf scrubber (ATS), and Scenedesmus were analyzed, with Scenedesmus selected for detailed evaluation due to its high ash removal efficiency. The objective was to optimize a purification process that minimizes ash and heavy metal content while preserving biochemical integrity. Algal biomass underwent sequential washing with DI, NTA, and NTA+DI under varying temperatures (90-130 °C). Analytical techniques including Fourier Transform Infrared (FTIR) spectroscopy, Inductively Coupled …


Biochar For Soil Amendment: Applications, Benefits, And Environmental Impacts, Ujjwal Pokharel, Gururaj Neelgund, Ram L. Ray, Venkatesh Balan, Sandeep Kumar Jan 2025

Biochar For Soil Amendment: Applications, Benefits, And Environmental Impacts, Ujjwal Pokharel, Gururaj Neelgund, Ram L. Ray, Venkatesh Balan, Sandeep Kumar

Civil & Environmental Engineering Faculty Publications

The excessive use of chemical fertilizers results in environmental issues, including loss of soil fertility, eutrophication, increased soil acidity, alterations in soil characteristics, and disrupted plant–microbe symbiosis. Here, we synthesize recent studies available from up to 2025, focusing on engineered biochar and its application in addressing issues of soil nutrient imbalance, soil pollution from inorganic and organic pollutants, soil acidification, salinity, and greenhouse gas emissions from fields. Application of engineered biochar enhanced the removal of Cr (VI), Cd²+, Ni²+, Zn²+, Hg²+, and Eu³+ by 85%, 73%, 57.2%, 12.7%, 99.3%, and 99.2%, …


Flexible Hybrid Self-Powered Piezo-Triboelectric Nanogenerator Based On Bto-Pvdf/Pdms Nanocomposites For Human Machine Interaction, Wentao Dong, Mengyun Li, Chang Chen, Kun Xie, Jinhua Hong, Lin Yang Jan 2025

Flexible Hybrid Self-Powered Piezo-Triboelectric Nanogenerator Based On Bto-Pvdf/Pdms Nanocomposites For Human Machine Interaction, Wentao Dong, Mengyun Li, Chang Chen, Kun Xie, Jinhua Hong, Lin Yang

Civil & Environmental Engineering Faculty Publications

As flexible and wearable electronics play more and more important role in smart watches, smart glass and virtual reality, and the power supply to the wearable electronics have been revealed more attentions for long-term usage and continuous healthy monitoring. To overcome the challenge, flexible self-powered BTO-PVDF/PDMS piezoelectric-triboelectric electric hybrid generators (BPP-HNG) are developed to human gesture monitoring and human machine interaction (HMI) application without external power supply. BPP-HNG based on BTO-PVDF and PDMS films are prepared by sol-gel and spin-coating method. When the BTO content is 20 wt.%, BPP-HNG exhibits better electrical performance with an output voltage of 20.51 V. …


A Global Application Programming Interface-Enabled Earthquake Ground Motion Relational Database For Engineering Applications, Tristan E. Buckreis, Chukwuebuka C. Nweke, Pengfei Wang, Scott J. Brandenberg, Maria E. Ramos-Sepúlveda, Rashid Shams, Shako Mohammed, Renmin Pretell, Silvia Mazzoni, Paolo Zimmaro, Jonathan P. Steward Jan 2025

A Global Application Programming Interface-Enabled Earthquake Ground Motion Relational Database For Engineering Applications, Tristan E. Buckreis, Chukwuebuka C. Nweke, Pengfei Wang, Scott J. Brandenberg, Maria E. Ramos-Sepúlveda, Rashid Shams, Shako Mohammed, Renmin Pretell, Silvia Mazzoni, Paolo Zimmaro, Jonathan P. Steward

Civil & Environmental Engineering Faculty Publications

We present a application programming interface (API)-enabled relational database of global earthquake ground motion intensity measures, associated metadata, and processed time-series data. Raw ground motion records were processed by the authors using either manual or semi-automated processing procedures, and every processed record has passed a quality review by a trained analyst. Computed intensity measures include peak acceleration and velocity, pseudo-spectral acceleration response spectra, cumulative absolute velocity, Arias Intensity, and Fourier amplitude spectra. The processed time-series data, associated metadata, and ground motion intensity measures were organized into a web-served relational database consisting of 32 tables connected by primary/foreign key pairs. Ground …


Revealing Rainfall Partitioning Characteristics Of Shrubs In Semi-Arid Sandy Land: Based On In-Situ Measurement Data, Hu Liu, Limin Duan, Yongzhi Bao, Xin Tong, Huimin Lei, Zhiming Han, Wenrui Zhang, Xixi Wang, V. P. Singh, Tingxi Liu Jan 2025

Revealing Rainfall Partitioning Characteristics Of Shrubs In Semi-Arid Sandy Land: Based On In-Situ Measurement Data, Hu Liu, Limin Duan, Yongzhi Bao, Xin Tong, Huimin Lei, Zhiming Han, Wenrui Zhang, Xixi Wang, V. P. Singh, Tingxi Liu

Civil & Environmental Engineering Faculty Publications

Rainfall is partitioned by the vegetation canopy into three components: throughfall, stemflow, and canopy interception, which profoundly influence key hydrological processes, including vegetation growth, groundwater recharge, water cycling, and regional water balance. However, research comparing the applicability of throughfall measurement methods in semi-arid shrub communities remains scarce, and quantitative analyses of rainfall partitioning processes based on in-situ observations are still inadequate. This study focuses on the sand-fixing pioneer vegetation of semi-arid sandy land, Caragana microphylla, and conducts simultaneous throughfall measurements using the rain gauge method and the trough method to compare the differences between the two approaches. Based on …


Sustainable Management Of Erosive Shores: An Interdisciplinary Approach Integrating Engineering And Social Sciences At A Tide-Dominant Beach Area, Jun Ik Sohn, Hyun Dong Kim, Kiran Adhithya Ramakrishnan Jan 2025

Sustainable Management Of Erosive Shores: An Interdisciplinary Approach Integrating Engineering And Social Sciences At A Tide-Dominant Beach Area, Jun Ik Sohn, Hyun Dong Kim, Kiran Adhithya Ramakrishnan

Civil & Environmental Engineering Faculty Publications

This study investigates the causes and consequences of shoreline erosion at Kkotji Beach, a prominent tourist destination on the west coast of South Korea, where the degradation of the coastal environment has increasingly threatened the local tourism industry and economy, by employing a mixed-methods approach that combines field observations with MIKE 21 hydrodynamic simulations and by integrating perspectives from coastal engineering and the social sciences to develop practical, site-specific strategies for mitigating erosion, enhancing public awareness, and promoting sustainable coastal planning and development that support long-term environmental resilience and economic stability. The results show that dominant ebb currents drive southward …


Laboratory Investigation Of Shape And Initial Orientation Effects On Surf Zone Object Migration, Temitope E. Idowu, Jack A. Puleo Jan 2025

Laboratory Investigation Of Shape And Initial Orientation Effects On Surf Zone Object Migration, Temitope E. Idowu, Jack A. Puleo

Civil & Environmental Engineering Faculty Publications

Discarded objects like munitions in marine environments pose public safety risks. The behavior of various density objects deployed at four cross-shore positions in the surf zone of a large-scale 120 m x 5 m x 5 m wave flume were observed under different forcing conditions. Net migration was predominantly directed offshore, with approximately 70 % offshore migration observed near the outer surf zone. Density, shape, and initial orientation were identified as important to object behavior, with density acting as the dominant driver in 67 % of the object pairing scenarios. The influence of shape and initial orientation on net migration …


Low Salinities Impair Heat Tolerance And Alter Reproductive Traits With No Implications For Survival In A Marine Annelid From Coastal Habitats, Gabrielle Newton, Gloria Massamba-N'Siala Jan 2025

Low Salinities Impair Heat Tolerance And Alter Reproductive Traits With No Implications For Survival In A Marine Annelid From Coastal Habitats, Gabrielle Newton, Gloria Massamba-N'Siala

Biological Sciences Faculty Publications

Climate change is expected to intensify salinity and temperature fluctuations in estuarine and coastal habitats. However, the impact of salinity variation on ectotherms’ thermal tolerance remains underexplored, limiting our understanding of the interplay between these stressors. This study investigated salinity-dependent changes in life history traits (survival, growth rate, fecundity, and egg size) over a 33-day exposure to a salinity gradient (12, 17, 22, 27, 32, 35, 40, 45, 50) in the marine annelid Ophryotrocha labronica. Individuals that survived the salinity treatments were assessed for their upper and lower thermal tolerance limits. Female individuals, the target of the study, exhibited …


Cellular Responses Of Astrangia Poculata (Ellis And Solander, 1786) And Its Symbiont To Experimental Heat Stress, Tyler E. Harman, Daniel Barshis, Briana Hauff Salas, Kevin B. Strychar Jan 2025

Cellular Responses Of Astrangia Poculata (Ellis And Solander, 1786) And Its Symbiont To Experimental Heat Stress, Tyler E. Harman, Daniel Barshis, Briana Hauff Salas, Kevin B. Strychar

Biological Sciences Faculty Publications

Climate change has had devastating effects on tropical coral reefs; however, much less is known regarding how heat stress affects temperate coral. This research focuses on Astrangia poculata (Ellis and Solander, 1786) collected from Narragansett Bay, RI, during the summer and winter seasons and understanding the effect of experimental thermal extremes (i.e., 26 °C) on seasonally different populations. Photosynthetic efficiency (Fv/Fm), symbiont density (via an inverse relationship with pixel intensity), and oxidative stress via reactive oxygen species (ROS) concentrations were measured on symbiotic and aposymbiotic A. poculata. Higher Fv/Fm rates were observed in summer- vs. winter-collected corals (p ≤ …


Alternative Splicing In A Coral During Heat Stress Acclimation And Recovery, Nitin Baliga, Kathryn Stanklewicz, Jacob Valenzuela, Serdar Turkarsian, Wei-Ju Wu, Kelly Gomez-Campo, Nicolas Locatelli, Trinity Conn, Veronica Radice, Katherine Parker, Rachel Alderdice, Line Bay, Christian Voolstra, Daniel Barshis, Iliana Baums Jan 2025

Alternative Splicing In A Coral During Heat Stress Acclimation And Recovery, Nitin Baliga, Kathryn Stanklewicz, Jacob Valenzuela, Serdar Turkarsian, Wei-Ju Wu, Kelly Gomez-Campo, Nicolas Locatelli, Trinity Conn, Veronica Radice, Katherine Parker, Rachel Alderdice, Line Bay, Christian Voolstra, Daniel Barshis, Iliana Baums

Biological Sciences Faculty Publications

Climate change has caused drastic declines in corals. As sessile organisms, corals acclimate to environmental shifts through genome-wide changes in gene expression, epigenetic modifications, and alterations in microbiome composition. However, alternative splicing (AS), a conserved mechanism of stress response in many organisms, has been under-explored in corals. Using short-term acute thermal stress assays, we investigated patterns of AS in the scleractinian coral Acropora cervicornis during response to low (33°C), medium (35°C), and high (37°C) heat stress and subsequent overnight recovery. Our findings demonstrate reproducible dynamic shifts in AS of at least 40 percent of all genes during response to heat …


Analyzing Microbial Communities In Porites Astreoides, Sanaa Caldwell, Katie Parker, Daniel Barshis Jan 2025

Analyzing Microbial Communities In Porites Astreoides, Sanaa Caldwell, Katie Parker, Daniel Barshis

Biological Sciences Faculty Publications

Coral reefs are vital marine ecosystems that support many different species and ecosystem services through protecting coastlines from storms and erosion, providing raw materials for medication, and facilitating diversity amongst marine species. Anthropogenic climate change is causing ocean temperatures to exceed the range of coral thermal tolerance resulting in more coral bleaching events globally. However, some corals have the capacity to withstand high temperatures through different thermal tolerance strategies. A balanced microbial community plays a critical role in coral health and recent studies have indicated that a balanced microbiome is associated with temperature-stress tolerant corals. Yet, there is a severe …


Summer Temperature Maxima Already Challenge Thermal Capacities Of Coral In The Southern Persian/Arabian Gulf, Rachel Alderdice, Gabriela Perna, Hannah Manns, Anna Fiesinger, Luigi Colin, Kathryn Stankiewicz, Kelly Gomez-Campo, Samantha Goyen, Line Bayse, Nitin Baliga, Jake Valenzuela, Iliana B. Baums, Daniel J. Barshis, John A. Burt, Christian R. Voolstra Jan 2025

Summer Temperature Maxima Already Challenge Thermal Capacities Of Coral In The Southern Persian/Arabian Gulf, Rachel Alderdice, Gabriela Perna, Hannah Manns, Anna Fiesinger, Luigi Colin, Kathryn Stankiewicz, Kelly Gomez-Campo, Samantha Goyen, Line Bayse, Nitin Baliga, Jake Valenzuela, Iliana B. Baums, Daniel J. Barshis, John A. Burt, Christian R. Voolstra

Biological Sciences Faculty Publications

The future of coral reefs remains uncertain as intensifying ocean warming continues to drive coral decline and demise worldwide. Corals occurring in extreme environments such as the Persian/Arabian Gulf (PAG), the world’s warmest sea, represent a promising resource to study the genetic architecture of thermal tolerance. However, their thermal capacities remain unresolved. We applied short-term heat stress assays using the Coral Bleaching Automated Stress System (CBASS) to determine signatures of thermal tolerance from three common species (Porites harrisoni, Platygyra daedalea, and Cyphastrea microphthalma) across three sites (two in the extreme southern PAG and a more benign …


Selective Nutrient Incorporation May Underestimate Heterotrophy Of A Mixotrophic Reef-Building Coral, Connor R. Love, Marleen Stuhr, Michael D. Fox, Veronica Z. Radice, Maoz Fine, Kelton W. Mcmahon, David L. Valentine Jan 2025

Selective Nutrient Incorporation May Underestimate Heterotrophy Of A Mixotrophic Reef-Building Coral, Connor R. Love, Marleen Stuhr, Michael D. Fox, Veronica Z. Radice, Maoz Fine, Kelton W. Mcmahon, David L. Valentine

Biological Sciences Faculty Publications

Mixotrophic reef-building corals acquire nutrition via photosynthate translocation from endosymbiotic microalgae and by heterotrophic prey/particle capture. Heterotrophy promotes resistance to, and recovery from, environmental stress, but quantifying coral heterotrophy remains difficult due to complex resource exchanges within the coral holobiont. We interrogated the response of multiple biomarkers to coral heterotrophy using fatty acid profiling and stable isotope analysis of Stylophora pistillata grown along a controlled feeding gradient from pure autotrophy to pure heterotrophy. We found that fatty acids and nitrogen were effectively incorporated into both coral host and symbiont tissues, while carbon, which is the primary target for conventional heterotrophy …


Biotime 2.0: Expanding And Improving A Database Of Biodiversity Time Series, Maria Dornelas, Laura H. Antão, Amanda E. Bates, Viviana Brambilla, Jonathan M. Chase, Cher F. Y. Chow, Ada Fontrodona-Eslava, Anne E. Magurran, Inês S. Martins, Faye Moyes, Alban Sagouis, Samuel Adu-Acheampong, Daniel Acquah-Lamptey, Dušan Adam, Penelope A. Ajani, Aitor Albaina, Pablo Almaraz, Jeongseop An, Roger Sigismund Anderson, Madelaine Jean Robertson Anderson, Alexsander Z. Antunes, Ivan Arismendi, Linda Armbrecht, Pedro Aros-Mardones, Sreejith Kalpuzha Ashtamoorthy, Narayanan Ayyappan, Gal Badihi, Joseph J. Bailey, Andrew H. Baird, Mark Edward Baird, Sreekumar Vadakkethil Balakrishnan, José António L. Barão-Nóbrega, Adi Barash, Miguel Barbosa, Jos Barlow, Claus Bässler, Matthieu Beaumont, Natalie Beenaerts, Tiago Octavio Begot, Wallace Beiroz, Ricardo Beldade, David M. Bell, Alecia Bellgrove, Jonathan Belmaker, Lisandro Benedetti-Cecchi, Cassandra E. Benkwitt, Pamela Medina-Van Berkum, Brandon T. Bestelmeyer, Matthew C. Betts, Maxwell Kelvin Billah, Anne D. Bjorkman, Magdalena Błażewicz, Christopher P. Bloch, Shane A. Blowes, Antonio Bode, Juliano A. Bogoni, Thomas Bolger, Timothy C. Bonebrake, Erik Bonsdorff, Roberta Bottarin, Luke N. Brokensha, Rob W. Brooker, Andrew J. Brooks, Helge Bruelheide, Thiago Almeida Bueno, Claire Laguionie, Mariana Lopes Campagnoli, James Cant, Erica Pellegrini Caramaschi, Alexandre Caron, Tadhg Carroll, Tancredi Caruso, Juan Carvajal-Quintero, Giuseppe Castaldelli, Edward Castañeda-Moya, Pedro V. Castilho, Sonia Zanini Cechin, Shahar Chaikin, Uchangi Manjunatha Chandrashekara, Tory J. Chase, Chaolun Allen Chen, Jorge José Cherem, Sei-Woong Choi, Erica M. Christensen, Alexander V. Christianini, Jackson Wing Four Chu, Peter Coad, Carl Van Colen, Lise Comte, Elisabeth J. Cooper, J. Hans C. Cornelissen, Eddy Cosson, Unai Cotano, Luc Crevecoeur, Shannan Kyle Crow, Graeme S. Cumming, Vanessa S. Daga, Gabriella Damasceno, Gergana N. Daskalova, Claire H. Davies, Robert A. Davis, Frank P. Day, Sussy De-La-Zerda, Amy Elizabeth Deacon, Indradatta De Castro-Arrazola, Steven Degraer, Kharran Deonarinesingh, Juan C. Diaz-Ricaurte, Christopher R. Dickman, Tara Dirilgen, Ciaran John Dolan, J. Emmett Duffy, Timothy E. Dunn, Giselda Durigan, Ciara Dwyer, Steven Earl, Dor Edelist, Graham John Edgar, Sally Edmonson, Ashley K. Elgin, Kari Elsa Ellingsen, Sarah C. Elmendorf, Ruth S. Eriksen, S. K. Morgan Ernest, Ruben Escribano, Paula Cabral Eterovick, Brian S. Evans, Jason D. Everett, Vesela Evtimova, Dan A. Exton, Andrew J. Fairbairn, Filipe Moreli Fantacini, Fabiano Turini Farah, Fábio Zanella Farneda, Mario E. Favila, Philippe Fernandez-Fournier, Braulio Fernández-Zapata, Diogo F. Ferreira, Carola Ferronato, Christopher R. Du Feu, Alessandra Fidelis, David A. Fifield, Vilmar Picinatto Filho, Walter Mesquita Filho, Robert N. L. Fitt, Carlos A. H. Flechtmann, William R. Fraser, Donna L. Fraser, Lídia Freixas, John Fryxell, Garrett J. Fundakowski, Scott Stanley Gabara, Elise Gallois, Mariana Garcia Criado, Emili García-Berthou, Joaquim Garrabou, Andrew R. Gates, Roberto Cazzola Gatti, Anna Gavioli, Tal Gavriel, Benoit Gendreau-Berthiaume, Xingli Giam, Carina Gjerdrum, Michael Glemnitz, Jasmin Annica Godbold, Daniel Gómez-Gras, Rodrigo Barbosa Gonçalves, Andy Goold, Richard R. Gordon, Menachem Goren, Fernando Vilas Boas Goulart, William G. Gould, Meagan M. Graboski, Nicholas A. J. Graham, Maurício Eduardo Graipel, Laura J. Grange, Aaron C. Greenville, Gary D. Grossman, Valeria A. Guinder, Peter Haase, Gary N. Haskins, Kris Havstad, Luise Hermanutz, Michael Julian Hames Hickford, Pamela Hidalgo, Pedro Higuchi, Andrew S. Hoey, Gert Van Hoey, Annika Hofgaard, Kristen T. Holeck, Robert D. Hollister, Richard T. Holmes, Mia Odell Hoogenboom, Joaquín Hortal, Tammy Horton, Chih-Hao Hsieh, Christine L. Huffard, Ida-Maria Huikkonen, Allen H. Hurlbert, Julian Hynes, Pascal Irz, Natalia Macedo Ivanauskas, Akemi Iwayama, Darren K. James, Ute Jandt, Anna M. Jażdżewska, Merlijn Jocque, Sophie T. Johnston, Samuel E. I. Jones, Faith A. M. Jones, Julia A. Jones, Edite Jucevica, Ugis Kagainis, Maiko Kagami, Jungwon Kang, Xuejia Ke, Erin Colleen Keeley, Rebecca Kinnear, Kari Klanderud, Uwe Klinck, Roel Van Klink, Stefan Klotz, Carolien Kockaert, Halvor Knutsen, Matti Koivula, Alessandra Kortz, Peter Kriegel, Chao-Yang Kuo, David J. Kushner, Rosina Kyerematen, Raphaël Lagarde, Lesley T. Lancaster, Ori Frid Landau, Wouter Van Landuyt, Eric R. Larson, Mai Lazarus, Cheol Min Lee, Jonathan S. Lefcheck, Jonas J. Lembrechts, Renato A. Ferreira De Lima, Romullo Guimarães Lima, Nathália G. S. Lima, Cristina Linares, Sandra C. Lindstrom, Francisco Lloret, John David Lloyd, Cleonice Maria Cardoso Lobato, David M. Lodge, Peter Richard Long, Celeste López-Abbate, Adrià López-Baucells, Julio Louzada, Maite Louzao, Antonella Lugliè, Micheli Ribeiro Luiz, S. Ellen Macdonald, Joshua S. Madin, André Lincoln Barroso Magalhães, Rajindra Mahabir, David Maphisa, Thomas Edward Martin, Marcio Martins, Patrick T. Martone, Silvia Matesanz, Shin-Ichiro S. Matsuzaki, Thomas J. Matthews, Iain Mccombe Matthews, Connie J. Maxwell, Kent P. Mcfarland, Brian J. Mcgill, Diane Marie Mcknight, Michael J. Mcwilliam, Jason Meador, Henning Meesenburg, Kristin Meier, Viesturs Melecis, Peter L. Meserve, Christoph F. J. Meyer, Anders Michelsen, Natali Olivia Roman Miiller, Marco Milardi, Nataliya Milchakova, Robert J. Miller, Jonathan Millett, Tom Moens, Luciano F. A. Montag, Jon Moore, Jörg Müller, Akhil Murali, Shauna Ann Murray, Isla H. Myers-Smith, Randall W. Myster, Masahiro Nakamura, Sasi Nayar, Francis Neat, James A. Nelson, Michael Paul Nelson, Boris P. Nikolov, Rym Nouioua, Collins Ayine Nsor, Michael O' Connor, Edward Adzesiwor Obodai, Amy Marie Offland, Romà Ogaya, Hisako Ogura, Thomas A. Okey, Julian D. Olden, Luiz Gustavo Rodrigues Oliveira-Santos, Jeffrey C. Oliver, Esben Moland Olsen, Vladimir G. Onipchenko, Daniel Oro, Dais Ozolins, Krzysztof Pabis, Bachisio Mario Padedda, Facundo X. Palacio, Alain Paquette, Sinta Trilestari Pardede, David M. Patersib, Sarah Pausina, Raphaël Pélissier, Steven C. Pennings, Josep Penuelas, Felipe Walter Pereira, Nivaldo Peroni, Sergio Picó, Francesca Pilotto, Hudson Tercio Pinheiro, Oscar Pizarro, Roberto Pizzolotto, Francesco Pomati, Paulo Santos Pompeu, Dominique Ponton, Eric Post, Nicolas Poulet, Juha Pöyry, Steven J. Presley, Herbert H. T. Prins, Pieter Provoost, Kathleen L. Prudic, Vignesh Punjayil, Petr Pyšek, Pascal Querner, Juan Pablo Quimbayo, Indar W. Ramnarine, Daniel C. Reed, Peter Bernard Reich, Suzanne M. Remillard, Cerren Richards, Anthony James Richardson, Itai Van Rijin, Victor H. Rivera-Monroy, Christian Rixen, Kevin Peter Robinson, Ricardo Rocha, Ricardo R. Rodrigues, Cassy Rodrigues, Bjørn De Roos, Denise De C. De Rossa-Feres, Loreta Rosselli, Peter Charles Rothlisberg, Ana Rubio, Lars G. Rudstam, Catalina S. Ruz, Nancy B. Rybicki, Gunther Van Ryckegem, Andrew L. Rypel, Jon P. Sadler, Victor Satoru Saito, Sofia Sal, Renato Portela Salomão, Nathan J. Sanders, Flavio A. M. Santos, Tiago Gomes Dos Santos, Swapan Kumar Sarker, Sara E. Scanga, Marcus Schaub, Jochen Schmidt, Inger Kappel Schmidt, Robert L. Schooley, Alfred Schultz, Alberto Scotti, Amanda Serpell-Stevens, Filipe C. Serrano, Elizabeth H. Shadwick, Matthew Shaft, Thomas W. Sherry, Erika Mayumi Shimabukuro, Jacek Siciński, Caya Sievers, Fernando Rodrigues Da Silva, Ana Carolina Da Silva, Juliana M. Silveira, Tadeu Siqueira, Arunkumar Kavidapadinjattathil Sivadasan, Prasad Theruvil Parambil Sivan, Agnija Skuja, Amalia L. Slaughter, Jasper A. Slingsby, Joseph R. Smith, Bruno Eleres Soares, Martin Solan, Flaviana Maluf Souza, Gabriel B. G. Souza, Joshua L. Sprague, Ulrich Stachow, J. John Stadt, Christopher D. Stallings, Radoslav Hristov Stanchev, Emily H. Stanley, Brian M. Starzomski, Jose Mauro Sterza, Maarten Stevens, F. Gary Stiles, Stefan Stoll, Rick D. Stuart-Smith, Yzel Rondon Súarez, Laura Super, Sarah R. Supp, Tapio Sutela, Iain M. Suthers, Anna Suuronen, Kerrie M. Swadling, Daniel K. Szydlowski, Hisatomo Taki, Sara Jeanne Snell Taylor, Pablo A. Tedesco, Nils Teichert, Akira Terui, Gary P. Thiede, Anne Thimonier, Oliver Thomas, Peter Allan Thompson, Simon Thorn, Jeremy S. Tiemann, Luís Felipe Toledo, Anne Tolvanen, Maria Teresa Zugliani Toniato, Ignasi Torre, Marcos Adriano Tortato, Kumiko Totsu, Andrew Trant, Robert R. Twilley, Hirokazu Urabe, Pierre Valade, Nelson Valdivia, Martha Isabel Vallejo, Thomas J. Valone, Jan Vanaverbeke, Tiago Silveira Vasconcelos, Teppo Vehanen, Fábio Venturoli, Hans M. Verheye, Hendrik Jannes Wietse Vermeulen, Arne Verstraeten, Marcelo Vianna, Rui Vieira, João Paulo Santos Vieira-Alencar, Marc Vilella, Jean Ricardo Simões Vitule, Lien Van Vu, Robert B. Waide, Paige S. Warren, Joseph Paul Wayman, Sara L. Webb, Benjamin Weigel, Ellen A. R. Welti, Fritha West, Fulgor Westermann, Matthew A. Whalen, Ethan P. White, Claire E. Widdicombe, Richard Williams, Mark Williamson, Michael R. Willig, Sonja Wipf, Eric J. Woehler, Alje Woldering, Kerry D. Woods, Wu-Bing Xu, Ruthy Yahel, Zeren Yang, Kyle J. A. Zawada, Camila Zornosa-Torres, Assaf Zvuloni Jan 2025

Biotime 2.0: Expanding And Improving A Database Of Biodiversity Time Series, Maria Dornelas, Laura H. Antão, Amanda E. Bates, Viviana Brambilla, Jonathan M. Chase, Cher F. Y. Chow, Ada Fontrodona-Eslava, Anne E. Magurran, Inês S. Martins, Faye Moyes, Alban Sagouis, Samuel Adu-Acheampong, Daniel Acquah-Lamptey, Dušan Adam, Penelope A. Ajani, Aitor Albaina, Pablo Almaraz, Jeongseop An, Roger Sigismund Anderson, Madelaine Jean Robertson Anderson, Alexsander Z. Antunes, Ivan Arismendi, Linda Armbrecht, Pedro Aros-Mardones, Sreejith Kalpuzha Ashtamoorthy, Narayanan Ayyappan, Gal Badihi, Joseph J. Bailey, Andrew H. Baird, Mark Edward Baird, Sreekumar Vadakkethil Balakrishnan, José António L. Barão-Nóbrega, Adi Barash, Miguel Barbosa, Jos Barlow, Claus Bässler, Matthieu Beaumont, Natalie Beenaerts, Tiago Octavio Begot, Wallace Beiroz, Ricardo Beldade, David M. Bell, Alecia Bellgrove, Jonathan Belmaker, Lisandro Benedetti-Cecchi, Cassandra E. Benkwitt, Pamela Medina-Van Berkum, Brandon T. Bestelmeyer, Matthew C. Betts, Maxwell Kelvin Billah, Anne D. Bjorkman, Magdalena Błażewicz, Christopher P. Bloch, Shane A. Blowes, Antonio Bode, Juliano A. Bogoni, Thomas Bolger, Timothy C. Bonebrake, Erik Bonsdorff, Roberta Bottarin, Luke N. Brokensha, Rob W. Brooker, Andrew J. Brooks, Helge Bruelheide, Thiago Almeida Bueno, Claire Laguionie, Mariana Lopes Campagnoli, James Cant, Erica Pellegrini Caramaschi, Alexandre Caron, Tadhg Carroll, Tancredi Caruso, Juan Carvajal-Quintero, Giuseppe Castaldelli, Edward Castañeda-Moya, Pedro V. Castilho, Sonia Zanini Cechin, Shahar Chaikin, Uchangi Manjunatha Chandrashekara, Tory J. Chase, Chaolun Allen Chen, Jorge José Cherem, Sei-Woong Choi, Erica M. Christensen, Alexander V. Christianini, Jackson Wing Four Chu, Peter Coad, Carl Van Colen, Lise Comte, Elisabeth J. Cooper, J. Hans C. Cornelissen, Eddy Cosson, Unai Cotano, Luc Crevecoeur, Shannan Kyle Crow, Graeme S. Cumming, Vanessa S. Daga, Gabriella Damasceno, Gergana N. Daskalova, Claire H. Davies, Robert A. Davis, Frank P. Day, Sussy De-La-Zerda, Amy Elizabeth Deacon, Indradatta De Castro-Arrazola, Steven Degraer, Kharran Deonarinesingh, Juan C. Diaz-Ricaurte, Christopher R. Dickman, Tara Dirilgen, Ciaran John Dolan, J. Emmett Duffy, Timothy E. Dunn, Giselda Durigan, Ciara Dwyer, Steven Earl, Dor Edelist, Graham John Edgar, Sally Edmonson, Ashley K. Elgin, Kari Elsa Ellingsen, Sarah C. Elmendorf, Ruth S. Eriksen, S. K. Morgan Ernest, Ruben Escribano, Paula Cabral Eterovick, Brian S. Evans, Jason D. Everett, Vesela Evtimova, Dan A. Exton, Andrew J. Fairbairn, Filipe Moreli Fantacini, Fabiano Turini Farah, Fábio Zanella Farneda, Mario E. Favila, Philippe Fernandez-Fournier, Braulio Fernández-Zapata, Diogo F. Ferreira, Carola Ferronato, Christopher R. Du Feu, Alessandra Fidelis, David A. Fifield, Vilmar Picinatto Filho, Walter Mesquita Filho, Robert N. L. Fitt, Carlos A. H. Flechtmann, William R. Fraser, Donna L. Fraser, Lídia Freixas, John Fryxell, Garrett J. Fundakowski, Scott Stanley Gabara, Elise Gallois, Mariana Garcia Criado, Emili García-Berthou, Joaquim Garrabou, Andrew R. Gates, Roberto Cazzola Gatti, Anna Gavioli, Tal Gavriel, Benoit Gendreau-Berthiaume, Xingli Giam, Carina Gjerdrum, Michael Glemnitz, Jasmin Annica Godbold, Daniel Gómez-Gras, Rodrigo Barbosa Gonçalves, Andy Goold, Richard R. Gordon, Menachem Goren, Fernando Vilas Boas Goulart, William G. Gould, Meagan M. Graboski, Nicholas A. J. Graham, Maurício Eduardo Graipel, Laura J. Grange, Aaron C. Greenville, Gary D. Grossman, Valeria A. Guinder, Peter Haase, Gary N. Haskins, Kris Havstad, Luise Hermanutz, Michael Julian Hames Hickford, Pamela Hidalgo, Pedro Higuchi, Andrew S. Hoey, Gert Van Hoey, Annika Hofgaard, Kristen T. Holeck, Robert D. Hollister, Richard T. Holmes, Mia Odell Hoogenboom, Joaquín Hortal, Tammy Horton, Chih-Hao Hsieh, Christine L. Huffard, Ida-Maria Huikkonen, Allen H. Hurlbert, Julian Hynes, Pascal Irz, Natalia Macedo Ivanauskas, Akemi Iwayama, Darren K. James, Ute Jandt, Anna M. Jażdżewska, Merlijn Jocque, Sophie T. Johnston, Samuel E. I. Jones, Faith A. M. Jones, Julia A. Jones, Edite Jucevica, Ugis Kagainis, Maiko Kagami, Jungwon Kang, Xuejia Ke, Erin Colleen Keeley, Rebecca Kinnear, Kari Klanderud, Uwe Klinck, Roel Van Klink, Stefan Klotz, Carolien Kockaert, Halvor Knutsen, Matti Koivula, Alessandra Kortz, Peter Kriegel, Chao-Yang Kuo, David J. Kushner, Rosina Kyerematen, Raphaël Lagarde, Lesley T. Lancaster, Ori Frid Landau, Wouter Van Landuyt, Eric R. Larson, Mai Lazarus, Cheol Min Lee, Jonathan S. Lefcheck, Jonas J. Lembrechts, Renato A. Ferreira De Lima, Romullo Guimarães Lima, Nathália G. S. Lima, Cristina Linares, Sandra C. Lindstrom, Francisco Lloret, John David Lloyd, Cleonice Maria Cardoso Lobato, David M. Lodge, Peter Richard Long, Celeste López-Abbate, Adrià López-Baucells, Julio Louzada, Maite Louzao, Antonella Lugliè, Micheli Ribeiro Luiz, S. Ellen Macdonald, Joshua S. Madin, André Lincoln Barroso Magalhães, Rajindra Mahabir, David Maphisa, Thomas Edward Martin, Marcio Martins, Patrick T. Martone, Silvia Matesanz, Shin-Ichiro S. Matsuzaki, Thomas J. Matthews, Iain Mccombe Matthews, Connie J. Maxwell, Kent P. Mcfarland, Brian J. Mcgill, Diane Marie Mcknight, Michael J. Mcwilliam, Jason Meador, Henning Meesenburg, Kristin Meier, Viesturs Melecis, Peter L. Meserve, Christoph F. J. Meyer, Anders Michelsen, Natali Olivia Roman Miiller, Marco Milardi, Nataliya Milchakova, Robert J. Miller, Jonathan Millett, Tom Moens, Luciano F. A. Montag, Jon Moore, Jörg Müller, Akhil Murali, Shauna Ann Murray, Isla H. Myers-Smith, Randall W. Myster, Masahiro Nakamura, Sasi Nayar, Francis Neat, James A. Nelson, Michael Paul Nelson, Boris P. Nikolov, Rym Nouioua, Collins Ayine Nsor, Michael O' Connor, Edward Adzesiwor Obodai, Amy Marie Offland, Romà Ogaya, Hisako Ogura, Thomas A. Okey, Julian D. Olden, Luiz Gustavo Rodrigues Oliveira-Santos, Jeffrey C. Oliver, Esben Moland Olsen, Vladimir G. Onipchenko, Daniel Oro, Dais Ozolins, Krzysztof Pabis, Bachisio Mario Padedda, Facundo X. Palacio, Alain Paquette, Sinta Trilestari Pardede, David M. Patersib, Sarah Pausina, Raphaël Pélissier, Steven C. Pennings, Josep Penuelas, Felipe Walter Pereira, Nivaldo Peroni, Sergio Picó, Francesca Pilotto, Hudson Tercio Pinheiro, Oscar Pizarro, Roberto Pizzolotto, Francesco Pomati, Paulo Santos Pompeu, Dominique Ponton, Eric Post, Nicolas Poulet, Juha Pöyry, Steven J. Presley, Herbert H. T. Prins, Pieter Provoost, Kathleen L. Prudic, Vignesh Punjayil, Petr Pyšek, Pascal Querner, Juan Pablo Quimbayo, Indar W. Ramnarine, Daniel C. Reed, Peter Bernard Reich, Suzanne M. Remillard, Cerren Richards, Anthony James Richardson, Itai Van Rijin, Victor H. Rivera-Monroy, Christian Rixen, Kevin Peter Robinson, Ricardo Rocha, Ricardo R. Rodrigues, Cassy Rodrigues, Bjørn De Roos, Denise De C. De Rossa-Feres, Loreta Rosselli, Peter Charles Rothlisberg, Ana Rubio, Lars G. Rudstam, Catalina S. Ruz, Nancy B. Rybicki, Gunther Van Ryckegem, Andrew L. Rypel, Jon P. Sadler, Victor Satoru Saito, Sofia Sal, Renato Portela Salomão, Nathan J. Sanders, Flavio A. M. Santos, Tiago Gomes Dos Santos, Swapan Kumar Sarker, Sara E. Scanga, Marcus Schaub, Jochen Schmidt, Inger Kappel Schmidt, Robert L. Schooley, Alfred Schultz, Alberto Scotti, Amanda Serpell-Stevens, Filipe C. Serrano, Elizabeth H. Shadwick, Matthew Shaft, Thomas W. Sherry, Erika Mayumi Shimabukuro, Jacek Siciński, Caya Sievers, Fernando Rodrigues Da Silva, Ana Carolina Da Silva, Juliana M. Silveira, Tadeu Siqueira, Arunkumar Kavidapadinjattathil Sivadasan, Prasad Theruvil Parambil Sivan, Agnija Skuja, Amalia L. Slaughter, Jasper A. Slingsby, Joseph R. Smith, Bruno Eleres Soares, Martin Solan, Flaviana Maluf Souza, Gabriel B. G. Souza, Joshua L. Sprague, Ulrich Stachow, J. John Stadt, Christopher D. Stallings, Radoslav Hristov Stanchev, Emily H. Stanley, Brian M. Starzomski, Jose Mauro Sterza, Maarten Stevens, F. Gary Stiles, Stefan Stoll, Rick D. Stuart-Smith, Yzel Rondon Súarez, Laura Super, Sarah R. Supp, Tapio Sutela, Iain M. Suthers, Anna Suuronen, Kerrie M. Swadling, Daniel K. Szydlowski, Hisatomo Taki, Sara Jeanne Snell Taylor, Pablo A. Tedesco, Nils Teichert, Akira Terui, Gary P. Thiede, Anne Thimonier, Oliver Thomas, Peter Allan Thompson, Simon Thorn, Jeremy S. Tiemann, Luís Felipe Toledo, Anne Tolvanen, Maria Teresa Zugliani Toniato, Ignasi Torre, Marcos Adriano Tortato, Kumiko Totsu, Andrew Trant, Robert R. Twilley, Hirokazu Urabe, Pierre Valade, Nelson Valdivia, Martha Isabel Vallejo, Thomas J. Valone, Jan Vanaverbeke, Tiago Silveira Vasconcelos, Teppo Vehanen, Fábio Venturoli, Hans M. Verheye, Hendrik Jannes Wietse Vermeulen, Arne Verstraeten, Marcelo Vianna, Rui Vieira, João Paulo Santos Vieira-Alencar, Marc Vilella, Jean Ricardo Simões Vitule, Lien Van Vu, Robert B. Waide, Paige S. Warren, Joseph Paul Wayman, Sara L. Webb, Benjamin Weigel, Ellen A. R. Welti, Fritha West, Fulgor Westermann, Matthew A. Whalen, Ethan P. White, Claire E. Widdicombe, Richard Williams, Mark Williamson, Michael R. Willig, Sonja Wipf, Eric J. Woehler, Alje Woldering, Kerry D. Woods, Wu-Bing Xu, Ruthy Yahel, Zeren Yang, Kyle J. A. Zawada, Camila Zornosa-Torres, Assaf Zvuloni

Biological Sciences Faculty Publications

Motivation: Here, we make available a second version of the BioTIME database, which compiles records of abundance estimates for species in sample events of ecological assemblages through time. The updated version expands version 1.0 of the database by doubling the number of studies and includes substantial additional curation to the taxonomic accuracy of the records, as well as the metadata. Moreover, we now provide an R package (BioTIMEr) to facilitate use of the database.

Main Types of Variables Included: The database is composed of one main data table containing the abundance records and 11 metadata tables. The data are organised …


Tidal Love Numbers For A Non-Rotating Two-Fluid Neutron Star: Interior Solution, Gregory G Jaurequi Jan 2025

Tidal Love Numbers For A Non-Rotating Two-Fluid Neutron Star: Interior Solution, Gregory G Jaurequi

Dissertations and Theses

We investigate the tidal Love numbers for a non-rotating dark matter admixed neutron star (NS). Tidal Love numbers, which quantify a star's response to the tidal field of a companion object, are an important feature in the gravitational wave (GW) signal and vary depending on the star’s equation of state and dark matter profiles. By determining how the internal properties of the NS affect the GW signal, we hope that improvements in gravitational wave detection will help constrain these parameters by providing additional data from neutron star mergers with other compact objects. To this end, we focus on solving the …


Synthesis And Luminescence Studies Of Europium Doped Zinc Lead Germanate Phosphors, Anika Nawar Chowdhury Jan 2025

Synthesis And Luminescence Studies Of Europium Doped Zinc Lead Germanate Phosphors, Anika Nawar Chowdhury

Dissertations and Theses

Phosphors are luminescent materials that emit light upon excitation, which have significant uses in optoelectronics, bioimaging, sensors, security, and other fields. Inorganic luminescent materials are well known for their stability and broad applications. Among these, germanate based phosphors have recently caught attention because of their inertness, excellent chemical and thermal stability, structural flexibility, and unique properties. For optimizing the properties of the materials, impurities are added to the host intentionally, which are known as dopants. Rare earth elements are often applied as dopants because of their unique f-f transitions. Eu3+ is one of the broadly studied rare-earth dopants among these, …


Leveraging Gpt-4o For Automated Extraction Of Neural Projections From Scientific Literature, Rashmie Abeysinghe, Gorbachev Jowah, Licong Cui, Samden D Lhatoo, Guo-Qiang Zhang Jan 2025

Leveraging Gpt-4o For Automated Extraction Of Neural Projections From Scientific Literature, Rashmie Abeysinghe, Gorbachev Jowah, Licong Cui, Samden D Lhatoo, Guo-Qiang Zhang

Faculty, Staff and Student Publications

Sudden Unexpected Death in Epilepsy (SUDEP) is a major cause of death for epilepsy patients having uncontrolled seizures. Understanding the complex neural circuits within the central nervous system is crucial for understanding the mechanisms underlying cardiorespiratory regulation, particularly in the context of SUDEP. This study explores the potential of GPT-4o, a cutting-edge language model, to automate the extraction of neural projections from scientific literature. We developed prompts to extract neuroscientific structures, extract projections, and perform synonym harmonization. Applying the approach to four neuroscientific articles, the method extracted 205 projections. A random sample of 100 projections identified was handed over to …