Physical Sciences and Mathematics | Open Access Articles

Mgrre_Thinsections_Mgrre_11_10, Mgrre

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Mgrre_Thinsections_Mgrre_11_9, Mgrre

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Mgrre_Thinsections_Mgrre_11_8, Mgrre

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Mgrre_Thinsections_Mgrre_11_7, Mgrre

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Mgrre_Thinsections_Mgrre_11_6, Mgrre

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Mgrre_Thinsections_Mgrre_11_5, Mgrre

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Mgrre_Thinsections_Mgrre_11_4, Mgrre

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Mgrre_Thinsections_Mgrre_11_3, Mgrre

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Computation Of Minimum Numbers Of Tile And Bond-Edge Types For Dna Self-Assembly Of Select Archimedean Graphs, Tabitha Merrithew, Jessica Sorrells

Theory & Applications of Graphs

This project mathematically models the self-assembly of DNA nanostructures in the shape of select Archimedean graphs using the flexible tile model. Under the most strict set of conditions of this model, we employ principles of linear algebra and graph theory to determine the minimum number of different DNA branched molecules needed to construct the desired shapes, theoretically reducing laboratory costs and the waste of biomaterials. We determine exact values for $T_3(G)$, the minimum number of molecule (or ``tile") types needed for all six order 12 and 24 Archimedean graphs. We also determine exact values for $B_3(G)$, the minimum number of …

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Optimizing Multi-Layer/Multi-Physics Passive Adaptive Thermal Enclosures For Climate-Responsive Energy Regulation: A Numerical Study, Rajae Bousselham, Mingjiang Tao, Sergio Granados-Focil, Adriana Hera, Steven Van Dessel

Chemistry

Adaptive facades regulate heat transfer by adjusting their thermal behavior in response to environmental conditions. Passive adaptive systems, including stimuli-responsive thermal storage materials, tunable radiative coatings, and variable-conductivity layers, offer significant potential for material-based thermal regulation. However, their combined potential remains unexplored, as most studies examine individual mechanisms in isolation. As a result, trade-offs among energy savings, material usage, design complexity, and climate responsiveness are often underrepresented, overlooking coupled interactions in multilayer assemblies limiting their effectiveness. This study develops a transient three-dimensional numerical framework coupling heat transfer with multi-objective optimization to evaluate trade-offs between minimizing annual energy consumption and enclosure …

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Defense-To-Attack: Bypassing Weak Defenses Enables Stronger Jailbreaks In Vision-Language Models, Yunhan Zhao, Xiang Zheng, Yige Li, Xingjun Ma

Research Collection School Of Computing and Information Systems

Despite their superb capabilities, Vision-Language Models (VLMs) have been shown to be vulnerable to jailbreak attacks. While recent jailbreaks have achieved notable progress, their effectiveness and efficiency can still be improved. In this work, we reveal an interesting phenomenon: incorporating weak defense cues into the attack pipeline can significantly enhance both the effectiveness and efficiency of jailbreaks on VLMs. Building on this insight, we propose Defense2Attack, a novel jailbreak method that bypasses the safety guardrails of VLMs by leveraging defensive patterns to guide jailbreak prompt construction. Specifically, Defense2Attack consists of three key components: (1) a visual optimizer that embeds universal …

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Semantic-Structural Decoupling: Disentangling Semantic Attention From Structural Bias In The Attention Manifold, Pengkun Jiao, Bin Zhu, Jingjing Chen, Yu-Gang Jiang

Research Collection School Of Computing and Information Systems

The empirical success of attention mechanism in Multimodal Large Language Models (MLLMs) often obscures its inherent, subtle flaws. Specifically, MLLMs consistently exhibit disproportionate attention toward certain semantically uninformative visual tokens, a phenomenon termed "register" or "Visual Attention Sinks." While existing inference intervention methods attempt to identify these sink tokens and redistribute their attention weights, such approaches typically treat these tokens in isolation and suffer from computational inefficiency. Instead, we reframe this phenomenon as a generalized textual bias exerted over visual features that extends beyond isolated sink tokens. From this perspective, a pervasive structural bias leads to the dilution of the …

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Mgrre_Thinsections_Mgrre_11_2, Mgrre

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Analyzing Developer Discussions On Eu And Us Privacy Legislation Compliance In Github Repositories, Georgia M. Kapitsaki, Maria Papoutsoglou, Christoph Treude, Ioanna Theophilou

Research Collection School Of Computing and Information Systems

Context: Privacy legislation has impacted the way software systems are developed, prompting practitioners to update their implementations. Specifically, the EU General Data Protection Regulation (GDPR) and the California Consumer Privacy Act (CCPA) have forced the community to focus on users’ data privacy. Objectives: Relying on the vast amount of data on developer issues available in GitHub repositories, our aim is to gather empirical evidence on the issues developers of Open Source Software discuss to comply with privacy legislation. Method: We examined such discussions by mining and analyzing 32,820 issues from GitHub repositories. We partially analyzed the dataset automatically to identify …

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Spatialimaginer: Towards Adaptive Visual Imagination For Spatial Reasoning, Yian Li, Yang Jiao, Bin Zhu, Tianwen Qian, Shaoxiang Chen, Jingjing Chen, Yu-Gang Jiang

Research Collection School Of Computing and Information Systems

Spatial intelligence, which refers to the ability to reason about geometric and physical structure from visual observations, remains a core challenge for multimodal large language models. Despite promising performance, recent multimodal large language models (MLLMs) often exhibit fragile reasoning traces in spatial intelligence tasks that involve consistent spatial state recognition. We argue that these failures stem from a mismatch between the spatial recognition mechanism and the text-only reasoning behavior of these MLLMs. Effective spatial reasoning requires low-level geometric structure to be faithfully preserved and updated throughout the reasoning process, whereas textual representations tend to abstract away precisely these critical details. …

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Managing Collaboration Under Conservation Crisis: Trust, Risk, And Control In The Gulf Of Maine Fishery Management Network, Evelyn Roozee, Owen Temby, Dongkyu Kim, Antonia Sohns, Anthony Rocha Lima, Jasper R. De Vries, Gordon M. Hickey

School of Earth, Environmental, & Marine Sciences Faculty Publications

Transboundary fishery management and the intertwined conservation of critically endangered species represent significant governance challenges that require ongoing inter-organizational communication, collaboration, and collective action to achieve shared objectives. Previous research suggests that inter-organizational collaborative performance depends heavily on different dimensions of trust and complementary control mechanisms to mitigate the perceived risks of collaborating and enable the reciprocal sharing of resources and the coordination of activities. However, it is unclear how proposed relationships between trust, risk, and control are shaped by disruptions to established transboundary management networks. This study presents the results of survey research conducted in the Gulf of Maine …

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Effects Of Demineralization Protocols On Hydrogen And Oxygen Isotope Ratios In Fossil Bone Collagen, Linda M. Reynard

Boise State University Publications and Presentations

The effect of three commonly used preparation protocols on bone collagen δ2H and δ18O values was investigated, using six generally well-preserved faunal bones (cattle, bison, horse) ranging in age from the Holocene to Late Pleistocene. The treatments tested were ethylene diamine tetraacetic acid demineralization without gelatinization and hydrochloric acid demineralization with and without gelatinization. There are significant shifts in δ18O values among preparation methods. No systematic shifts in bone collagen δ2H values were noted among the three treatments, and most offsets were low (< 2–3 ‰) and smaller than typical measurement uncertainties. A few sample/treatment combinations yielded slightly higher inter-treatment δ2H differences (∼ 5–7 ‰). Lower mass fraction of hydrogen in …

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A Review Of Gallium And Germanium Recovery From Industrial Solid Residues, Ernest V. Oteng, Marthias Silwamba, Lana Alagha, Alex Luyima

Mining Engineering Faculty Research & Creative Works

The global demand for critical elements such as gallium (Ga) and germanium (Ge), and the shift toward circular mining has accelerated the development of new extraction and recovery processing these metals from industrial solid residues. This transition is driven by a substantial surge in demand for advanced technologies and the depletion of primary ore. Consequently, industrial solid residues, particularly zinc processing residues, smelter slags, flue dusts, and coal fly ash, are emerging as viable alternative sources. These residues incorporate Ga and Ge through isomorphic substitution in phases such as ferrites, silicates, and glassy aluminosilicates, and are enriched by industrial processes, …

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Keyframe Selection From Motion Capture Data With Dual-Agent Reinforcement Learning, Kun Hu, Wang, Clinton Mo, Mingyang Ma, Shaohui Mei, Zebin Chen, Zhiyong Wang

Research outputs 2022 to 2026

Animation production workflows centered around motion capture techniques require animators to edit motions based on a set of keyframes. However, most existing keyframe selection methods are optimization-based, which suffer from the issues of flexibility and efficiency. In this paper, a novel deep reinforcement learning method with dual agents are proposed for unsupervised keyframe selection. First, an S-Agent and an R-Agent evaluate the actions of selection and refinement, respectively. A deep spatio-temporal network, namely graph keyframe evaluation network (GKEN), is proposed for the agents. Then, an animation specified reward is devised based on reconstruction, which fulfills three important properties of the …

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Codee Expects That Every Mathematician Will Do Their Odes: From The Battle Of Trafalgar To Calculus (Or Nelson To Newton), Steven Miller

CODEE Journal

Using the historical Battle of Trafalgar as a case study, we introduce students to mathematical modeling to describe and explore real-world systems. Starting with the question—how do force sizes and combat effectiveness determine which side wins?—we show how to use a blend of mathematics and computational tools to investigate the answer. Beginning by defining a simple differential equation model for combat dynamics, we analyze its behavior using differential equations and accessible algebraic techniques. We show how computational methods and simulations can support systematic, visual exploration and suggest conjectures that mathematical analysis can then establish. This material could serve as the …

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Glomalin-Related Soil Protein In Colluvial Soils As A Proxy For Reconstructing Millenary Changes In Landscape And Soil Health, Axel Werner, Lourdes López-Merino, Joeri Kaal, Cruz Ferro-Vázquez, Oscar Serrano

Research outputs 2022 to 2026

Glomalin-related soil protein (GRSP) is an operationally defined soil organic matter pool that includes a heat shock protein linked to arbuscular mycorrhizal fungi (AMF) living in symbiosis with most vascular plants and plays a key role in soil health. However, the potential of GRSP as a palaeoecological proxy remains unexplored. We analysed the GRSP content in a North-western Iberian colluvial soil profile encompassing the last 14,000 years. We aimed to 1) identify whether GRSP is preserved, and 2) investigate whether GRSP could be used as a palaeoecological proxy after comparing its record with palynological and pedoanthracological records that account for …

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Climate Transition Stress Testing For Corporate Credit Risk: A Replicable Data-Mining Pipeline Using Esg Risk Scores, Huynh Long Hung Nguyen, Alan @ Ali Madjelisi Megargel, Rajesh Krishna Balan, Paul Robert Griffin

Research Collection School Of Computing and Information Systems

We present a replicable data-mining pipeline for illustrative, scenario-conditioned corporate distress analysis under feature decoupling. The pipeline links Compustat financial statements with Sustainalytics ESG Risk Rating records for 2,144 U.S. non-financial public firms, constructs a standardized Transition Risk Index (TRI), estimates a contemporaneous accounting-distress classifier, and applies transparent transition-cost sensitivities. Distress is defined as annual operating income insufficient to cover annual interest expense; interest coverage itself is excluded from the predictors. The resulting model is not a forward default forecast or a regulatory probability-of-default model. On a held-out cross-sectional test set, the logistic specification obtains AUC 0.909, PR-AUC 0.822, and …

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Tiny Large Language Models For Iot Networks: Potentials And Challenges, Muhammed Golec, Suhib Bani Melhem, Yaser Khamayseh, Abdulmalik Alwarafy, Naofal Al-Dhahir

All Works

Large Language Models (LLM), which have gained great momentum in recent years, have revolutionized the field of Artificial Intelligence (AI); while their applicability for hardware-constrained Internet of Things (IoT) environments has begun to be questioned. This has led to the emergence of compact architecture and resource-efficient Tiny LLM models. This survey paper systematically examines Tiny LLMs for IoT networks and classifies existing approaches in five basic dimensions: model architectures, optimization strategies, transfer learning methods, deployment paradigms, and explainability-security integration. By applying the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) method, 139 related studies published between 2020 and 2025 …

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Semiconductor Supply Chain Risk Monitoring And Forecasting: A Hybrid Big Data Architecture And Empirical Validation, Ming Gong, Sangwhan Cha

Harrisburg University Other Works

Global semiconductor manufacturing networks are characterized by deep geographical concentration, high capital intensity, and acute vulnerability to regional supply disruptions. While public merchandise trade statistics provide transparent, reproducible empirical records, transforming these raw macroeconomic streams into actionable supply chain risk intelligence requires both rigorous analytical framing and scalable computational architecture. In this paper, we propose an enterprise-grade cloud data architecture designed for semiconductor risk monitoring, combining scheduled distributed batch processing on Google Cloud (Dataproc/PySpark, BigQuery) with an event-driven streaming ingestion lane (Pub/Sub, Dataflow/Apache Beam). To rigorously evaluate the underlying scoring and forecasting logic without premature distributed deployment costs, we implement …

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Pattern Formation In Quantum Hierarchical Cellular Neural Networks, Wilson A. Zuniga-Galindo, B. A. Zambrano-Luna, Chayapuntika Indoung

School of Mathematical & Statistical Sciences Faculty Publications

We present a new class of quantum neural networks (QNNs) whose states are solutions of p -adic Schrödinger equations with a non-local potential that controls the interaction between the neurons. These equations are obtained as Wick rotations of the state equations of p -adic cellular neural networks (CNNs). The p -adic CNNs arise as continuous limits of large discrete hierarchical neural networks (NNs). The CNNs are bio-inspired by the Wilson–Cowan model, which describes the macroscopic dynamics of large populations of neurons. We provide a detailed study of the discretization of the new p -adic Schrödinger equations, which allows the construction …

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A Finite Element Model For Thermomechanical Stress-Strain Fields In Transversely Isotropic Strain-Limiting Materials, Saugata Ghosh, Dambaru Bhatta, S. M. Mallikarjunaiah

School of Mathematical & Statistical Sciences Faculty Publications

This paper presents a comprehensive computational framework for investigating thermo-elastic fracture in transversely isotropic materials, where classical linear elasticity fails to predict physically realistic behavior near stress concentrations. We address the challenge of unphysical strain singularities at crack tips by employing a strain-limiting theory of elasticity. This theory is characterized by an algebraically nonlinear constitutive relationship between stress and strain, which intrinsically enforces a limit on the norm of the strain tensor. This approach allows the development of very large stresses, as expected near a crack tip, while ensuring that the corresponding strains remain physically bounded. A loosely coupled system …

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Mgrre_Thinsections_Mgrre_11_1, Mgrre

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Llm-Driven Simulation Method For Mobilization Decision-Making In Weapons And Equipment Supply Chain, Qichang Guo, Jihai Zhang, Zichu Qin

Journal of System Simulation

Abstract: A LLM-driven multi-agent simulation model for production mobilization in the weapons and equipment supply chain is developed to address the practical challenge of transitioning the supply chain from peacetime to wartime production in response to surging wartime demand. The model consists of a military demand layer, a supply chain execution layer, and a mobilization decision-making layer. An LLM is incorporated as a mobilization decision generation module to represent the dynamic regulation of production conversion and expansion under war-readiness budget and production safety constraints. The simulation results show that compared with the no-mobilization and rule-based mobilization strategies, the LLM-based strategy …

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Chemical Plant Control Based On Dynamic Simulation And Reinforcement Learning, Yuxin Li, Haijie Li, Shangbo Han, Kai Gao, Qingyuan Zhang, Yanwen Xiao, Zhengcai Liu

Journal of System Simulation

Abstract: An intelligent control strategy framework combining offline training and on-site deployment for regenerative thermal oxidizer (RTO) operation control based on RL is proposed to solve the problem that fluctuations in exhaust gas concentration and flow, as well as changes in working conditions, make it difficult for RTO to maintain the system operating parameters within the economically optimal range in practical applications. In the offline phase, RL is employed to enable autonomous policy learning and global optimization. In the online phase, an adaptive policy correction mechanism based on real-time data is introduced. RL control strategy is integrated with the operation …

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Five-Dimensional Digital Twin System For Closed-Loop Gasoline Blending Optimization, Yaning Fang, Renchu He

Journal of System Simulation

Abstract: An adaptive blending optimization system based on five-dimensional digital twin theory is designed and developed to address the challenges of strict nonlinear constraints and frequent raw material fluctuations. A five-dimensional model architecture is constructed to achieve virtual-real mapping and synergy throughout the blending process. A closed-loop control strategy of "online model correction and dynamic recipe optimization" is proposed. The constrained recursive least squares (RLS) algorithm is adopted to update the octane blending effect model parameters, resolving the model mismatch caused by raw material fluctuations. The linear decreasing weight particle swarm optimization algorithm (LDW-PSO) is combined to determine the optimal …

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Full-Text Articles in Physical Sciences and Mathematics

Mgrre_Thinsections_Mgrre_11_10, Mgrre

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Mgrre_Thinsections_Mgrre_11_9, Mgrre

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Mgrre_Thinsections_Mgrre_11_8, Mgrre

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Mgrre_Thinsections_Mgrre_11_7, Mgrre

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Mgrre_Thinsections_Mgrre_11_6, Mgrre

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Mgrre_Thinsections_Mgrre_11_5, Mgrre

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Mgrre_Thinsections_Mgrre_11_4, Mgrre

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Mgrre_Thinsections_Mgrre_11_3, Mgrre

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Computation Of Minimum Numbers Of Tile And Bond-Edge Types For Dna Self-Assembly Of Select Archimedean Graphs, Tabitha Merrithew, Jessica Sorrells

Theory & Applications of Graphs

Optimizing Multi-Layer/Multi-Physics Passive Adaptive Thermal Enclosures For Climate-Responsive Energy Regulation: A Numerical Study, Rajae Bousselham, Mingjiang Tao, Sergio Granados-Focil, Adriana Hera, Steven Van Dessel

Chemistry

Defense-To-Attack: Bypassing Weak Defenses Enables Stronger Jailbreaks In Vision-Language Models, Yunhan Zhao, Xiang Zheng, Yige Li, Xingjun Ma

Research Collection School Of Computing and Information Systems

Semantic-Structural Decoupling: Disentangling Semantic Attention From Structural Bias In The Attention Manifold, Pengkun Jiao, Bin Zhu, Jingjing Chen, Yu-Gang Jiang

Research Collection School Of Computing and Information Systems

Mgrre_Thinsections_Mgrre_11_2, Mgrre

Thin Sections

Analyzing Developer Discussions On Eu And Us Privacy Legislation Compliance In Github Repositories, Georgia M. Kapitsaki, Maria Papoutsoglou, Christoph Treude, Ioanna Theophilou

Research Collection School Of Computing and Information Systems

Spatialimaginer: Towards Adaptive Visual Imagination For Spatial Reasoning, Yian Li, Yang Jiao, Bin Zhu, Tianwen Qian, Shaoxiang Chen, Jingjing Chen, Yu-Gang Jiang

Research Collection School Of Computing and Information Systems

Managing Collaboration Under Conservation Crisis: Trust, Risk, And Control In The Gulf Of Maine Fishery Management Network, Evelyn Roozee, Owen Temby, Dongkyu Kim, Antonia Sohns, Anthony Rocha Lima, Jasper R. De Vries, Gordon M. Hickey

School of Earth, Environmental, & Marine Sciences Faculty Publications

Effects Of Demineralization Protocols On Hydrogen And Oxygen Isotope Ratios In Fossil Bone Collagen, Linda M. Reynard

Boise State University Publications and Presentations

A Review Of Gallium And Germanium Recovery From Industrial Solid Residues, Ernest V. Oteng, Marthias Silwamba, Lana Alagha, Alex Luyima

Mining Engineering Faculty Research & Creative Works

Keyframe Selection From Motion Capture Data With Dual-Agent Reinforcement Learning, Kun Hu, Wang, Clinton Mo, Mingyang Ma, Shaohui Mei, Zebin Chen, Zhiyong Wang

Research outputs 2022 to 2026

Codee Expects That Every Mathematician Will Do Their Odes: From The Battle Of Trafalgar To Calculus (Or Nelson To Newton), Steven Miller

CODEE Journal

Glomalin-Related Soil Protein In Colluvial Soils As A Proxy For Reconstructing Millenary Changes In Landscape And Soil Health, Axel Werner, Lourdes López-Merino, Joeri Kaal, Cruz Ferro-Vázquez, Oscar Serrano

Research outputs 2022 to 2026

Climate Transition Stress Testing For Corporate Credit Risk: A Replicable Data-Mining Pipeline Using Esg Risk Scores, Huynh Long Hung Nguyen, Alan @ Ali Madjelisi Megargel, Rajesh Krishna Balan, Paul Robert Griffin

Research Collection School Of Computing and Information Systems

Tiny Large Language Models For Iot Networks: Potentials And Challenges, Muhammed Golec, Suhib Bani Melhem, Yaser Khamayseh, Abdulmalik Alwarafy, Naofal Al-Dhahir

All Works

Semiconductor Supply Chain Risk Monitoring And Forecasting: A Hybrid Big Data Architecture And Empirical Validation, Ming Gong, Sangwhan Cha

Harrisburg University Other Works

Pattern Formation In Quantum Hierarchical Cellular Neural Networks, Wilson A. Zuniga-Galindo, B. A. Zambrano-Luna, Chayapuntika Indoung

School of Mathematical & Statistical Sciences Faculty Publications

A Finite Element Model For Thermomechanical Stress-Strain Fields In Transversely Isotropic Strain-Limiting Materials, Saugata Ghosh, Dambaru Bhatta, S. M. Mallikarjunaiah

School of Mathematical & Statistical Sciences Faculty Publications

Mgrre_Thinsections_Mgrre_11_1, Mgrre

Thin Sections

Llm-Driven Simulation Method For Mobilization Decision-Making In Weapons And Equipment Supply Chain, Qichang Guo, Jihai Zhang, Zichu Qin

Journal of System Simulation

Chemical Plant Control Based On Dynamic Simulation And Reinforcement Learning, Yuxin Li, Haijie Li, Shangbo Han, Kai Gao, Qingyuan Zhang, Yanwen Xiao, Zhengcai Liu

Journal of System Simulation

Five-Dimensional Digital Twin System For Closed-Loop Gasoline Blending Optimization, Yaning Fang, Renchu He

Journal of System Simulation