Physical Sciences and Mathematics Commons^™

Establishing An Ecological Baseline Of Macroinfaunal Assemblages In Nearshore Sediments Of Southeast Florida, Candace Grimes

HCNSO Student Theses and Dissertations

Changes in the biosphere require ecological baselines in order to compare past, present, and future conditions and identify their effects. Establishing ecological baselines for infauna in southeastern Florida is a key component to understanding effects of current and future disturbances; however, nearshore sediment infaunal communities are neither as thoroughly investigated nor as well understood as, for example, coral reefs, seagrass beds, and mangroves. Baseline studies help assess and monitor changes due, for example, to human population growth, sea level change, and global warming. Therefore, six benthic cores were collected quarterly from six locations from May 2015 to February 2016 using …

Authentication In Wireless Body Area Networks (Wban), Nagalaxmi Yenuganti

USF Tampa Graduate Theses and Dissertations

With the advancements in technology and computing environment capabilities, the number of devices that people carry has increased exponentially. This increase initially occurred as a result of necessity to monitor the human body condition due to chronic diseases, heart problems etc. Later, individuals’ interest was drawn towards self-monitoring their physiology and health care. This is achieved by implanting various sensors that can proactively monitor the human body based on medical necessity and the health condition of the user. Sensors connected on a human body perceive phenomena such as locomotion or heartbeat, and act accordingly to form a Body Area Network. …

Quantum Dot Metrics For Preparative Chemistry And Fluorescence Applications, Yi Shen

Theses and Dissertations

Colloidal semiconductor quantum dots (QDs) are considered to be a promising candidate for bio-imaging and solar cells because of their extraordinary photo-physical properties. The ultimate goal of this dissertation is to design a reliable matrix and a reproducible method to prepare QDs-based biocompatible probe for fluorescence applications. Synthesis of quantum dots requires a large amount of ligands to improve the stability at high temperature. However, for further application and surface modification of QDs, excess ligands must be removed. In this dissertation, I will first describe using gel permeation chromatography (GPC) as a media to purify different types of QDs. A …

A Comparison Of Framing In Two Environmental Conflicts, Alexander M. Iannone

Theses and Dissertations

Frames can be perspectives about people, objects, events, or settings that guide action based on past experiences and values. Conflicts are created by different stakeholders “holding conflicting frames.” Researchers in the past have used framing analysis to try and better understand environmental conflicts that tend to perpetuate for extended periods of time. A set of researchers have relied on specific framing categories and typologies as a framework for analysis. They have found that the strong presence or lack thereof certain frames can tell us a lot about conflict dynamics and shed light into the undercurrents driving the complexity of the …

Polymer Characteristics Of Polyelectrolyte Polypeptides, Jorge Monreal

USF Tampa Graduate Theses and Dissertations

Polypeptides are polymerized chains of amino acids linked covalently through peptide bonds. Polyelectrolyte polypeptides are polypeptides with electrolyte repeating groups. Several amino acids contain ionizable side chains which result in charge distributions when dissolved in aqueous solutions. This dissertation is motivated by a desire to gain knowledge of polyelectrolyte polypeptides as recent advances in chemical synthesis of polypeptides have made possible the fabrication of designed polypeptides that do not naturally occur in nature. Potential applications of newly designed polypeptides span the range from medical to clothing and energy even to robotics.

In this dissertation we compare the characteristic behavior of …

Applications Of Molecular Modelling And Structure Based Drug Design In Drug Discovery, Sreya Mukherjee

USF Tampa Graduate Theses and Dissertations

Calcium ions have important roles in cellular processes including intracellular signaling, protein folding, enzyme activation and initiation of programmed cell death. Cells maintain low levels of calcium in their cytosol in order to regulate these processes. When activation of calcium-dependent processes is needed, cells can release calcium stored in the endoplasmic reticulum (ER) into the cytosol to initiate the processes. This can also initiate formation of plasma membrane channels that allow entry of additional calcium from the extracellular milieu. The change in calcium levels is referred to as calcium flux. A key protein involved in initiation of calcium flux is …

The Effect Of Home Range Estimation Techniques On Habitat Use Analysis, Brendon Quinton

USF Tampa Graduate Theses and Dissertations

The term “home range” refers to the area in which an animal spends most of its time during everyday activities. This study examined the effects of four different home range estimation techniques on the proportions of habitats located therein. The study utilized a point dataset collected for twenty individual Florida Black Bears (Ursus americanus floridanus), occurring in five different areas throughout the state of Florida. Each dataset was used to create home ranges using the following techniques: (1) Minimum Convex Polygon, (2) Kernel Density Estimation, (3) Characteristic Hull Polygon, and (4) Time-Geographic Density Estimation, a new home range …

Do Some Deep‐Sea, Sediment‐Dwelling Species Of Harpacticoid Copepods Have 1000‐Km‐Scale Range Sizes?, Erin E. Easton, David Thistle

School of Earth, Environmental, & Marine Sciences Faculty Publications

The range sizes of sediment‐dwelling deep‐sea species are largely unknown. Such knowledge is important because a deep sea composed in large part of species with 100‐km‐scale ranges would be very different from one composed predominantly of species with 1000‐km‐scale ranges. For example, the total species richness would be much greater in the first case than in the second. As a step towards the determination of the distribution of species’ range sizes in the deep sea, we asked whether harpacticoid copepods (Crustacea) on the continental rise in the northeastern Pacific had 1000‐km‐scale range sizes. We chose harpacticoids because they occur widely …

Sensitivity Of The Cuore Detector To Solar Axions, Dawei Li

Theses and Dissertations

The strong CP problem in Quantum Chromodynamics (QCD), predicts the neutron electric dipole moment to be a factor of 1010 larger than the observed upper bound [15]. Roberto Peccei and Helen Quinn [58, 63] proposed an elegant solution to this problem by introducing a global U(1)PQ symmetry that is spontaneously broken at an energy scale fa. A consequence of this symmetry-breaking is that a new spin-zero neutral pseudoscalar particle, the axion, is generated which is a Nambu-Goldstone boson [70, 78]. The “invisible axion” models with fa >> fEW, typically KSVZ and DFSZ models, have been proposed and recognized to be far-reaching …

Structural And Functional Studies Of Nicotinamide Adenine Dinucleotide And Streptolysin S Biosynthesis Proteins From Streptococcus Pyogenes, William T. Booth

Theses and Dissertations

Invasive infections caused by Streptococcus pyogenes, also known as Group A Strep (GAS), results in approximately 600,000 deaths annually. With evidence of antibiotic-resistant strains of this bacterium on the rise, there is a need for the identification of new drug targets to control these infections. In our approach we target the quinolinate-salvage pathway (QSP) and the streptolysin S (SLS) biosynthesis pathway. The QSP provides a secondary pathway for NAD+ biosynthesis within this organism; the SLS pathway leads to the formation of a quorum sensing molecule (SLS). We hypothesize that inhibition of the pathways will lead to GAS cell death or …

Development And Application Of Bayesian Semiparametric Models For Dependent Data, Junshu Bao

Theses and Dissertations

Dependent data are very common in many research fields, such as medicine (repeated measures), finance (time series), traffic (clustered), etc. Effective control/modeling of the dependency among data can enhance the performance of the models and result in better prediction. In many cases, the correlation itself may be of great interest. In this dissertation, we develop novel Bayesian semi-/nonparametric regression models to analyze data with various dependence structures. In Chapter 2, a Bayesian non- parametric multivariate ordinal regression model is proposed to fit drinking behavior survey data from DWI offenders. The responses are two-dimensional ordinal data, drinking frequency and drinking quantity …

From Near And Far: Utilization Of In-Situ And Remotely Sensed Satellite Data From Nasa And Noaa, Jessica Rochelle Price Sutton

Theses and Dissertations

Satellite remote sensing observations have been used for numerous studies to better understand physical and biological properties over varying spatial and temporal scales. Depending on the satellite and sensor, the satellite-derived observations can provide high spatial and temporal resolution for many important physical and biological variables. While there are many limitations in utilizing satellite remote sensing products, there are also many advantages. This dissertation investigates three different applications for satellite remote sensing products to address climatological and ecological concerns. This dissertation is motivated by two overall research questions: (1) How can satellite remote sensing products be used to address important …

Novel Methods For Analyzing Longitudinal Data With Measurement Error In The Time Variable, Caroline Munindi Mulatya

Theses and Dissertations

In some longitudinal studies, the observed time points are often confounded with measurement error due to the sampling conditions, resulting into data with measurement error in the time variable. This type of data occurs mainly in observational studies when the onset of a longitudinal process is unknown or in clinical trials when individual visits do not take place as specified by the study protocol, but are often rounded to coincide with the study protocol. Methodological and inferential implications of error in time varying covariates for both linear and nonlinear models have been studied widely. In this dissertation, we shift attention …

Platinum Decoupling From Pge In Peridotitic Sulfides From The St. Elena Ophiolite In Costa Rica, Jessica A. Holm

Theses and Dissertations

The platinum group elements (Os, Ir, Ru, Rh, Pt, Pd) are important petrogenetic tracers of mantle processes and the Re-Os isotope system an important tool for tracing ancient depletion and refertilization processes in the mantle. A key characteristic of these elements is that they are siderophile and chalcophile, and their abundance in the Earth’s mantle is thought to be controlled by sulfides. Existing thermodynamic data suggests that at reducing conditions similar to those found at the early stages of serpentinization, PGE may exist as alloys in the mantle. While numerous studies report on the bulk peridotite PGE and sulfide PGE …

Behavior Of Rare Earth Elements And High-Field Strength Elements During Peridotite - Seawater Interaction, Carl Pasquale Frisby

Theses and Dissertations

Serpentinized abyssal peridotites are evidence for active communication between the Earth’s hydrosphere and the upper mantle, where exchange and retention of both major and trace elements occur. Rare earth elements (REE) and high-field strength elements (HFSE: Ti, Zr, Hf, Nb, Ta) are generally thought of as immobile during serpentinization. In partially serpentinized abyssal peridotites, clinopyroxenes typically retain radiogenic Nd and Hf isotopic signatures that have been used to infer the composition and high temperature processes in the upper mantle. However, bulk rock Nd isotopes in some serpentinized abyssal peridotites less radiogenic values that approach that of seawater, which has been …

Determination Of The Polarization Observables Cx, Cz, And Py For Final-State Interactions In The Reaction −!D ! K+−!N, Tongtong Cao

Theses and Dissertations

The hyperon-nucleon (YN) interaction plays a key role in hypernuclei and strange nuclear matter and is an important part of the baryon-baryon interaction. While considerable progress has been made in the understanding of the nucleon-nucleon (NN) interaction, the YN interaction is less known. Some parameters of the YN potential can be obtained from the NN potential by using SU(3) symmetry. However, due to broken SU(3) there are parameters, which must be obtained from fits to experimental data. High-statistics data on exclusive photoproduction off the deuteron initiated with highly-polarized photons offer a unique opportunity to extract a large sample of polarization …

North American Butterfly Association Counts At Congaree National Park: A Case Study For Connecting Citizen Science To Management, Austin Clarridge

Theses and Dissertations

Citizen science is becoming an ever more popular way for scientists and resource managers to deal with needs for large temporal and spatial scale datasets. It provides a free or low cost means for collection of extensive amounts of data across time and space while acting as a public education and outreach tool, empowering communities to be involved in the management decisions being made in their back yard. Though large, well-known citizen science programs such as the Christmas Bird Counts are being used extensively for peer reviewed literature and management decisions, there are numerous smaller, local counts that have the …

Bayesian Nonparametric Approaches To Multiple Testing, Density Estimation, And Supervised Learning, William Cipolli Iii

Theses and Dissertations

This dissertation presents methods for several applications of Polya tree models. These novel nonparametric approaches to the problems of multiple testing, density estimation and supervised learning provide an alternative to other parametric and nonparametric models. In Chapter 2, the proposed approximate finite Polya tree multiple testing procedure is very successful in correctly classifying the observations with non-zero mean in a computationally efficient manner; this holds even when the non-zero means are simulated from a mean-zero distribution. Further, the model is capable of this for “interestingly different” observations in the cases where that is of interest. Chapter 3 proposes discrete, and …

Ligand-Induced Magnetic Changes In Metal Thin Films, Fiona Senta Oberbeck-Oxsher

Theses and Dissertations

The investigation of magnetic properties of thin films whose surfaces were modified by organic molecules shows that the addition of any functional group to the surface measurably changes the magnetic properties. The effect often scales with ligand strength and is not limited to surfaces with ferromagnetic properties. Improving upon the technique developed by Knaus et al. [1], a stable and sensitive device was developed to measure this magnetic effect using the planar Hall effect (PHE) in order to shed light onto controversial questions of purported paramagnetism of thiolated gold. There is a measureable non-diamagnetic response of thin gold layers when …

An Integrated Structural Analysis On Seismic Of A Paleo Mound Development (Woolsey Mound, Northern Gulf Of Mexico), Ricardo Tomas Troco Kabila

Theses and Dissertations

Woolsey Mound is ~1 km diameter thermogenic gas hydrate and cold seep (GHCS) complex system. It is located at ~900 m water depth in the Mississippi Canyon Lease Block 118 (MC–118) on the upper continental slope of the northern Gulf of Mexico (GOM). Due to its complex geology, widespread hydrate seepage activity and presence of benthic habitat, the mound serves as a permanent research site for a multidisciplinary seafloor observatory, thus providing insights into the dynamics of shallow fluid expulsion, their spatial and time variations and possible geological forcing mechanisms.

This study utilizes a set of high resolution 2D autonomous …

Temperature Dependent Transport Properties Of Chemical Vapor Deposition Graphene With Metal And Metal Hydride Surface Functionalization, Bochen Zhong

Theses and Dissertations

Graphene, a two-dimensional semi-conductor material containing carbon atoms tightly bonded together in a hexagonal structure, was first isolated by mechanical exfoliation in 2004. Over the past decade, it has drawn huge research interest due to its outstanding mechanical, thermal, and electrical properties. These unique properties of graphene lead to very high carrier mobility. In particular, after an annealing treatment to remove the residual impurities, the suspended graphene mobility exceeds 200,000 cm2/Vs. However, this value is highly reduced to only a few thousand cm2 /Vs in supported graphene on SiO2 or SiC substrates, due to different sources of scattering. For example, …

Small Mud And Sand Filled Paleochannels Offshore Charleston, Sc, Erin Smoak

Theses and Dissertations

The spatial variations of Quaternary sediments on the continental shelf record the progression of depositional environments during the latest sea-level rise, and are fundamental controls on submarine groundwater discharge (SGD) flow. SGD on continental shelves is an important but poorly constrained process. Spatial variations of lithologies on continental shelves, such as sand-filled paleochannels, are assumed to play a fundamental role in controlling where SGD occurs but coincident seismic mapping and sedimentological data are rare. Here we combine seismic mapping of paleochannel locations with sediment cores to examine the sedimentary characteristics of paleochannel fill and interfluvial deposits. To establish paleochannel locations …

Ecohydrology And Groundwater Dynamics In A Salt Marsh Island, Andrea L. H. Hughes

Theses and Dissertations

Tidal salt marshes are extraordinarily productive and valuable ecosystems that provide via groundwater a not insignificant portion of coastal solute and nutrient budgets. Among the many goods and services they provide are habitat for diverse wildlife, protection for coastal communities during storms, and protection for coastal surface waters by filtering anthropogenic pollutants. One threat to the health of tidal salt marshes along the East Coast have been episodes of Acute Marsh Dieback (AMD) from 1999 to 2001. Dieback was observed at North Inlet salt marsh from 2000 to 2001. Since salt marsh hydrology is dominated by the local tidal regime, …

Satellite-Assisted Assessment Of The Effects Of Human Development On Coral Reefs, Roatan Honduras, Clayton A. Helm

Theses and Dissertations

Human intervention is degrading coastal marine environments on a global scale. Coral reefs are one of the most valuable ecosystems occupying coastal areas that provide a vast majority of consumable fish, recreational activities, and protection from extreme events, such as tropical cyclones. Unfortunately, as human development activities such as the construction of buildings, road infrastructure, and agriculture increase in coastal areas, so do the detrimental impacts on the health of coral reefs. Consequences of coastal development such as pollution, sedimentation, eutrophication, overfishing, and recreational activities have been linked to diminished coral health. A degraded coral ecosystem can often be identified …

Iron Uptake And Accumulation Is A Target Of Nickel Toxicity During The Lag Phase In Escherichia Coli, Geoffrey Tuttle Ford

Theses and Dissertations

Various transition metals are essential to all forms of life, and are only required in trace amounts. But this dependence comes as a double-edged sword. All organisms must maintain a careful intracellular quota that does not traverse outside an acceptable range. One transition metal in particular is nickel. The importance of this transition metal has been debated widely and its function varies greatly between organisms, including bacteria. However, the adverse effects caused by over exposure to this metal have been the center of much experimentation in recent years. Still, the mechanisms of nickel toxicity and the subsequent effects on cellular …

The Development Of A High Resolution Deep-Uv Spatial Heterodyne Raman Spectrometer, Nirmal Lamsal

Theses and Dissertations

Raman spectroscopy is a light scattering technique that has a huge potential for standoff measurements in applications such as planetary exploration because a Raman spectrum provides a unique molecular fingerprint that can be used for unambiguous identification of target molecules. For this reason, NASA has selected a Raman spectrometer as one of the major instruments for its new Mars lander mission, Mars 2020, in the search for biomarkers that would be the indicators of past or present life. Raman scattering is strongest at UV wavelengths because of the inherent increase in the Raman cross section at shorter wavelengths and because …

Training Learnings To Self-Explains: Designing Instructions And Examples To Improve Problem Solving, Lauren E. Margulieux, Briana B. Morrison, Richard Catrambone

Computer Science Faculty Publications

In this experiment, we integrated two learning methods – subgoal learning and constructive learning – to explore their interactions and effects on solving computer programming problems. We taught learners to solve problems using worked example and practice problem pairs with one of three kinds of instructional design that either did not highlight the subgoals, described the subgoals, or prompted participants to describe the subgoals for themselves. In addition, we varied the distance of transfer between the worked example and practice problem pairs. We found that instructions that highlighted subgoals improved performance on later problem solving tasks. The groups that performed …

Front Matter

Journal of Digital Forensics, Security and Law

No abstract provided.

Masthead

Journal of Digital Forensics, Security and Law

No abstract provided.

A Smartphone-Based System For Clinical Gait Assessment, Andres Alfredo Perez Leon

USF Tampa Graduate Theses and Dissertations

Patients with lower limbs problems are an increasing population in the US and many of them require surgery and its subsequent post-op Physical Therapy (PT). For all these patients, tracking their progress and evolution towards full recovery is very important. To assess the patients and track their progress, patients are usually required to perform very specific tests administered by a physical therapist. These tests either require very expensive equipment or rather require the subjective experience of the physical therapist who administer them. One of these tests is the Functional Gait Assessment (FGA) test, perhaps the most widely adopted one for …