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Articles 67801 - 67830 of 294440
Full-Text Articles in Physical Sciences and Mathematics
Automatic Cephalometric Landmark Detection On X-Ray Images Using Object Detection, Cheng-Ho King, Yin-Lin Wang, Chia-Ling Tsai
Automatic Cephalometric Landmark Detection On X-Ray Images Using Object Detection, Cheng-Ho King, Yin-Lin Wang, Chia-Ling Tsai
Publications and Research
We propose a new deep convolutional cephalometric landmark detection framework for orthodontic treatment. Our proposed method consists of two major steps: landmark detection using a deep neural network for object detection, and landmark repair to ensure one instance per landmark class. For landmark detection, we modify the loss function of the backbone network YOLOv3 to eliminate the constrains on the bounding box and incorporate attention mechanism to improve the detection accuracy. For landmark repair, a triangle mesh is generated from the average face to eliminate superfluous instances, followed by estimation of missing landmarks from the detected ones using Laplacian Mesh. …
A Novel Tropical Geometry-Based Interpretable Machine Learning Method: Pilot Application To Delivery Of Advanced Heart Failure Therapies, Heming Yao, Harm Derkson, Jessica R. Golbus, Justin Zhang, Keith D. Aaronson, Jonathan Gryak, Kayvan Najarian
A Novel Tropical Geometry-Based Interpretable Machine Learning Method: Pilot Application To Delivery Of Advanced Heart Failure Therapies, Heming Yao, Harm Derkson, Jessica R. Golbus, Justin Zhang, Keith D. Aaronson, Jonathan Gryak, Kayvan Najarian
Publications and Research
Abstract—A model’s interpretability is essential to many practical applications such as clinical decision support systems. In this paper, a novel interpretable machine learning method is presented, which can model the relationship between input variables and responses in humanly understandable rules. The method is built by applying tropical geometry to fuzzy inference systems, wherein variable encoding functions and salient rules can be discovered by supervised learning. Experiments using synthetic datasets were conducted to demonstrate the performance and capacity of the proposed algorithm in classification and rule discovery. Furthermore, we present a pilot application in identifying heart failure patients that are eligible …
Technical Note: Novel Estimates Of The Leaf Relative Uptake Rate Of Carbonyl Sulfide From Optimality Theory, Georg Wohlfahrt, Albin Hammerle, Felix M. Spielmann, Florian Kitz, Chuixiang Yi
Technical Note: Novel Estimates Of The Leaf Relative Uptake Rate Of Carbonyl Sulfide From Optimality Theory, Georg Wohlfahrt, Albin Hammerle, Felix M. Spielmann, Florian Kitz, Chuixiang Yi
Publications and Research
In order to estimate the gross primary productivity (GPP) of terrestrial ecosystems from the canopy uptake of carbonyl sulfide (COS), the leaf relative uptake rate (LRU) of COS with respect to carbon dioxide needs to be known a priori. Currently, the variability of the LRU between plant species in different biomes of the world is poorly understood, making the choice of an appropriate LRU uncertain and hampering further progress towards developing COS as an alternative tracer of GPP. Here we propose a novel approach for estimating LRU based on plant optimality principles, validate it against in situ leaf gas exchange …
Attitudes About Cybersecurity Articulation Agreements And Transfer Students: A Statewide Survey Of Faculty Members And Advisors, Brian K. Payne, Tracy Vandecar-Burdin, Daniela Cigularova
Attitudes About Cybersecurity Articulation Agreements And Transfer Students: A Statewide Survey Of Faculty Members And Advisors, Brian K. Payne, Tracy Vandecar-Burdin, Daniela Cigularova
Sociology & Criminal Justice Faculty Publications
In this study, cybersecurity faculty and academic advisors from community colleges and 4-year universities in the southeast region of the United States completed a survey assessing attitudes about and support for articulation agreements and related transfer policies. Hypothesizing that professional structures shape attitudes and experiences, the researchers conducted an exploratory quantitative study with primarily descriptive analyses. The results reveal differences in attitudes between community college and 4-year stakeholders and between faculty and academic advisors. The results of this study are discussed in relation to faculty and advisor training and communication.
Civiic: Cybercrime In Virginia: Impacts On Industry And Citizens Final Report, Randy Gainey, Tancy Vandecar-Burdin, Jay Albanese, Thomas Dearden, James Hawdon, Katalin Parti
Civiic: Cybercrime In Virginia: Impacts On Industry And Citizens Final Report, Randy Gainey, Tancy Vandecar-Burdin, Jay Albanese, Thomas Dearden, James Hawdon, Katalin Parti
Sociology & Criminal Justice Faculty Publications
[First paragraph] Victimization from cybercrime is a major concern in Virginia, the US, and the world. As individuals and businesses spend more time online, it becomes increasingly important to understand cybercrime and how to protect against it. Such an understanding is dependent on valid and reliable baseline data that identifies the specific nature, extent, and outcomes of cybercrime activity. A better understanding of cybercrime activity is needed to target and prevent it more effectively, minimize its consequences, and provide support for both individual and corporate victims. Before that can occur, however, better baseline data are required, and this project was …
Text Reply Latencies For Mental Illness Screening, Ml Tlachac, Samuel S. Ogden
Text Reply Latencies For Mental Illness Screening, Ml Tlachac, Samuel S. Ogden
Information Systems and Analytics Department Faculty Conference Proceedings
Campus research presentation poster presented at Celebrating Academic Excellence at Bryant University.
Stereotype Threat Impact On Mobile Depression Screening, Ml Tlachac
Stereotype Threat Impact On Mobile Depression Screening, Ml Tlachac
Information Systems and Analytics Department Faculty Conference Proceedings
Campus research presentation poster presented at Celebrating Academic Excellence at Bryant University.
Qu-Brats: Miccai Brats 2020 Challenge On Quantifying Uncertainty In Brain Tumor Segmentation - Analysis Of Ranking Scores And Benchmarking Results, Raghav Mehta, Angelos Filos, Ujjwal Baid, Chiharu Sako, Richard Mckinley, Michael Rebsamen, Katrin Dätwyler, Raphael Meier, Piotr Radojewski, Gowtham Krishnan Murugesan, Sahil Nalawade, Chandan Ganesh, Ben Wagner, Fang F. Yu, Baowei Fei, Ananth J. Madhuranthakam, Joseph A. Maldjian, Laura Daza, Catalina Gómez, Pablo Arbeláez, Chengliang Dai, Shuo Wang, Hadrien Reynaud, Yuan-Han Mo, Elsa Angelini, Yike Guo, Wenjia Bai, Subhashis Banerjee, Lin-Min Pei, Murat Ak, Sarahi Rosas-González, Ilyess Zemmoura, Clovis Tauber, Minh H. Vu, Tufve Nyholm, Tommy Löfstedt, Laura Mora Ballestar, Veronica Vilaplana, Hugh Mchugh, Gonzalo Maso Talou, Alan Wang, Jay Patel, Ken Chang, Katharina Hoebel, Mishka Gidwani, Nishanth Arun, Sharut Gupta, Mehak Aggarwal, Praveer Singh, Elizabeth R. Gerstner, Jayashree Kalpathy-Cramer, Nicholas Boutry, Alexis Huard, Lasitha Vidyaratne, Md. Monibor Rahman, Khan M. Iftekharuddin, Joseph Chazalon, Elodie Puybareau, Guillaume Tochon, Jun Ma, Mariano Cabezas, Xavier Llado, Arnau Oliver, Liliana Valencia, Sergi Valverde, Mehdi Amian, Mohammadreza Soltaninejad, Andriy Myronenko, Ali Hatamizadeh, Xue Feng, Quan Dou, Nicholas Tustison, Craig Meyer, Nisarg A. Shah, Sanjay Talbar, Marc-André Weber, Abhishek Mahajan, Andras Jakab, Roland Wiest, Hassan M. Fathallah-Shaykh, Arash Nazeri, Mikhail Milchenko1, Daniel Marcus, Aikaterini Kotrotsou, Rivka Colen, John Freymann, Justin Kirby, Christos Davatzikos, Bjoern Menze, Spyridon Bakas, Yarin Gal, Tal Arbel
Qu-Brats: Miccai Brats 2020 Challenge On Quantifying Uncertainty In Brain Tumor Segmentation - Analysis Of Ranking Scores And Benchmarking Results, Raghav Mehta, Angelos Filos, Ujjwal Baid, Chiharu Sako, Richard Mckinley, Michael Rebsamen, Katrin Dätwyler, Raphael Meier, Piotr Radojewski, Gowtham Krishnan Murugesan, Sahil Nalawade, Chandan Ganesh, Ben Wagner, Fang F. Yu, Baowei Fei, Ananth J. Madhuranthakam, Joseph A. Maldjian, Laura Daza, Catalina Gómez, Pablo Arbeláez, Chengliang Dai, Shuo Wang, Hadrien Reynaud, Yuan-Han Mo, Elsa Angelini, Yike Guo, Wenjia Bai, Subhashis Banerjee, Lin-Min Pei, Murat Ak, Sarahi Rosas-González, Ilyess Zemmoura, Clovis Tauber, Minh H. Vu, Tufve Nyholm, Tommy Löfstedt, Laura Mora Ballestar, Veronica Vilaplana, Hugh Mchugh, Gonzalo Maso Talou, Alan Wang, Jay Patel, Ken Chang, Katharina Hoebel, Mishka Gidwani, Nishanth Arun, Sharut Gupta, Mehak Aggarwal, Praveer Singh, Elizabeth R. Gerstner, Jayashree Kalpathy-Cramer, Nicholas Boutry, Alexis Huard, Lasitha Vidyaratne, Md. Monibor Rahman, Khan M. Iftekharuddin, Joseph Chazalon, Elodie Puybareau, Guillaume Tochon, Jun Ma, Mariano Cabezas, Xavier Llado, Arnau Oliver, Liliana Valencia, Sergi Valverde, Mehdi Amian, Mohammadreza Soltaninejad, Andriy Myronenko, Ali Hatamizadeh, Xue Feng, Quan Dou, Nicholas Tustison, Craig Meyer, Nisarg A. Shah, Sanjay Talbar, Marc-André Weber, Abhishek Mahajan, Andras Jakab, Roland Wiest, Hassan M. Fathallah-Shaykh, Arash Nazeri, Mikhail Milchenko1, Daniel Marcus, Aikaterini Kotrotsou, Rivka Colen, John Freymann, Justin Kirby, Christos Davatzikos, Bjoern Menze, Spyridon Bakas, Yarin Gal, Tal Arbel
Electrical & Computer Engineering Faculty Publications
Deep learning (DL) models have provided the state-of-the-art performance in a wide variety of medical imaging benchmarking challenges, including the Brain Tumor Segmentation (BraTS) challenges. However, the task of focal pathology multi-compartment segmentation (e.g., tumor and lesion sub-regions) is particularly challenging, and potential errors hinder the translation of DL models into clinical workflows. Quantifying the reliability of DL model predictions in the form of uncertainties, could enable clinical review of the most uncertain regions, thereby building trust and paving the way towards clinical translation. Recently, a number of uncertainty estimation methods have been introduced for DL medical image segmentation tasks. …
Field Emission Migration In Cebaf Srf Cavities Using Deep Learning, K. Ahammed, J. Li, A. Carpenter, R. Suleiman, C. Tennant, L. Vidyaratne
Field Emission Migration In Cebaf Srf Cavities Using Deep Learning, K. Ahammed, J. Li, A. Carpenter, R. Suleiman, C. Tennant, L. Vidyaratne
Electrical & Computer Engineering Faculty Publications
The Continuous Electron Beam Accelerator Facility (CEBAF) operates hundreds of superconducting radio frequency (SRF) cavities in its two main linear accelerators. Field emission can occur when the cavities are set to high operating RF gradients and is an ongoing operational challenge. This is especially true in newer, higher gradient SRF cavities. Field emission results in damage to accelerator hardware, generates high levels of neutron and gamma radiation, and has deleterious effects on CEBAF operations. So, field emission reduction is imperative for the reliable, high gradient operation of CEBAF that is required by experimenters. Here we explore the use of deep …
Particle Identification And Tracking In Real Time Using Machine Learning On Fpga, F. Barbosa, L. Belfore, C. Dickover, C. Fanelli, S. Furletov, Y. Furletova, L. Jokhovets, D. Lawrence, D. Romanov
Particle Identification And Tracking In Real Time Using Machine Learning On Fpga, F. Barbosa, L. Belfore, C. Dickover, C. Fanelli, S. Furletov, Y. Furletova, L. Jokhovets, D. Lawrence, D. Romanov
Electrical & Computer Engineering Faculty Publications
This project is a multi-disciplinary endeavour between Physics, Electrical Engineering, and Computer Engineering. The purpose is to develop and implement an FPGA(*) based Machine Learning algorithm for real-time particle identification, filtering, and data reduction. This is important research that can be applied to streaming readout systems being developed now at JLab and other facilities. Real-time data processing is a frontier field in experimental physics, especially in HEP. The application of FPGAs at the trigger level is used by many current and planned experiments (CMS, LHCb, Belle2, PANDA). Usually they use conventional processing algorithms. LHCb has implemented ML elements for real-time …
Deeppose: Detecting Gps Spoofing Attack Via Deep Recurrent Neural Network, Peng Jiang, Hongyi Wu, Chunsheng Xin
Deeppose: Detecting Gps Spoofing Attack Via Deep Recurrent Neural Network, Peng Jiang, Hongyi Wu, Chunsheng Xin
Electrical & Computer Engineering Faculty Publications
The Global Positioning System (GPS) has become a foundation for most location-based services and navigation systems, such as autonomous vehicles, drones, ships, and wearable devices. However, it is a challenge to verify if the reported geographic locations are valid due to various GPS spoofing tools. Pervasive tools, such as Fake GPS, Lockito, and software-defined radio, enable ordinary users to hijack and report fake GPS coordinates and cheat the monitoring server without being detected. Furthermore, it is also a challenge to get accurate sensor readings on mobile devices because of the high noise level introduced by commercial motion sensors. To this …
Deep Learning Based Superconducting Radio-Frequency Cavity Fault Classification At Jefferson Laboratory, Lasitha Vidyaratne, Adam Carpenter, Tom Powers, Chris Tennant, Khan M. Iftekharuddin, Md. Monibor Rahman, Anna S. Shabalina
Deep Learning Based Superconducting Radio-Frequency Cavity Fault Classification At Jefferson Laboratory, Lasitha Vidyaratne, Adam Carpenter, Tom Powers, Chris Tennant, Khan M. Iftekharuddin, Md. Monibor Rahman, Anna S. Shabalina
Electrical & Computer Engineering Faculty Publications
This work investigates the efficacy of deep learning (DL) for classifying C100 superconducting radio-frequency (SRF) cavity faults in the Continuous Electron Beam Accelerator Facility (CEBAF) at Jefferson Lab. CEBAF is a large, high-power continuous wave recirculating linac that utilizes 418 SRF cavities to accelerate electrons up to 12 GeV. Recent upgrades to CEBAF include installation of 11 new cryomodules (88 cavities) equipped with a low-level RF system that records RF time-series data from each cavity at the onset of an RF failure. Typically, subject matter experts (SME) analyze this data to determine the fault type and identify the cavity of …
Bitcoin Selfish Mining Modeling And Dependability Analysis, Chencheng Zhou, Liudong Xing, Jun Guo, Qisi Liu
Bitcoin Selfish Mining Modeling And Dependability Analysis, Chencheng Zhou, Liudong Xing, Jun Guo, Qisi Liu
Electrical & Computer Engineering Faculty Publications
Blockchain technology has gained prominence over the last decade. Numerous achievements have been made regarding how this technology can be utilized in different aspects of the industry, market, and governmental departments. Due to the safety-critical and security-critical nature of their uses, it is pivotal to model the dependability of blockchain-based systems. In this study, we focus on Bitcoin, a blockchain-based peer-to-peer cryptocurrency system. A continuous-time Markov chain-based analytical method is put forward to model and quantify the dependability of the Bitcoin system under selfish mining attacks. Numerical results are provided to examine the influences of several key parameters related to …
Hybridization From Guest-Host Interactions Reduces The Thermal Conductivity Of Metal-Organic Frameworks, Mallory E. Decoster, Hasan Babaei, Sangeun S. Jung, Zeinab M. Hassan, John T. Gaskins, Ashutosh Giri, Emma M. Tiernan, John A. Tomko, Helmut Baumgart, Pamela M. Norris, Alan J.H. Mcgaughey, Christopher E. Wilmer, Engelbert Redel, Gaurav Giri, Patrick E. Hopkins
Hybridization From Guest-Host Interactions Reduces The Thermal Conductivity Of Metal-Organic Frameworks, Mallory E. Decoster, Hasan Babaei, Sangeun S. Jung, Zeinab M. Hassan, John T. Gaskins, Ashutosh Giri, Emma M. Tiernan, John A. Tomko, Helmut Baumgart, Pamela M. Norris, Alan J.H. Mcgaughey, Christopher E. Wilmer, Engelbert Redel, Gaurav Giri, Patrick E. Hopkins
Electrical & Computer Engineering Faculty Publications
We experimentally and theoretically investigate the thermal conductivity and mechanical properties of polycrystalline HKUST-1 metal–organic frameworks (MOFs) infiltrated with three guest molecules: tetracyanoquinodimethane (TCNQ), 2,3,5,6-tetrafluoro-7,7,8,8-tetracyanoquinodimethane (F4-TCNQ), and (cyclohexane-1,4-diylidene)dimalononitrile (H4-TCNQ). This allows for modification of the interaction strength between the guest and host, presenting an opportunity to study the fundamental atomic scale mechanisms of how guest molecules impact the thermal conductivity of large unit cell porous crystals. The thermal conductivities of the guest@MOF systems decrease significantly, by on average a factor of 4, for all infiltrated samples as compared to the uninfiltrated, pristine HKUST-1. This reduction in thermal conductivity goes in …
Artificial Intelligence And Machine Learning In Optical Information Processing: Introduction To The Feature Issue, Khan Iftekharuddin, Chrysanthe Preza, Abdul Ahad S. Awwal, Michael E. Zelinski
Artificial Intelligence And Machine Learning In Optical Information Processing: Introduction To The Feature Issue, Khan Iftekharuddin, Chrysanthe Preza, Abdul Ahad S. Awwal, Michael E. Zelinski
Electrical & Computer Engineering Faculty Publications
This special feature issue covers the intersection of topical areas in artificial intelligence (AI)/machine learning (ML) and optics. The papers broadly span the current state-of-the-art advances in areas including image recognition, signal and image processing, machine inspection/vision and automotive as well as areas of traditional optical sensing, interferometry and imaging.
"Mystify": A Proactive Moving-Target Defense For A Resilient Sdn Controller In Software Defined Cps, Mohamed Azab, Mohamed Samir, Effat Samir
"Mystify": A Proactive Moving-Target Defense For A Resilient Sdn Controller In Software Defined Cps, Mohamed Azab, Mohamed Samir, Effat Samir
Electrical & Computer Engineering Faculty Publications
The recent devastating mission Cyber–Physical System (CPS) attacks, failures, and the desperate need to scale and to dynamically adapt to changes, revolutionized traditional CPS to what we name as Software Defined CPS (SD-CPS). SD-CPS embraces the concept of Software Defined (SD) everything where CPS infrastructure is more elastic, dynamically adaptable and online-programmable. However, in SD-CPS, the threat became more immanent, as the long-been physically-protected assets are now programmatically accessible to cyber attackers. In SD-CPSs, a network failure hinders the entire functionality of the system. In this paper, we present MystifY, a spatiotemporal runtime diversification for Moving-Target Defense (MTD) to secure …
Runtime Power Allocation Based On Multi-Gpu Utilization In Gamess, Masha Sosonkina, Vaibhav Sundriyal, Jorge Luis Galvez Vallejo
Runtime Power Allocation Based On Multi-Gpu Utilization In Gamess, Masha Sosonkina, Vaibhav Sundriyal, Jorge Luis Galvez Vallejo
Electrical & Computer Engineering Faculty Publications
To improve the power consumption of parallel applications at the runtime, modern processors provide frequency scaling and power limiting capabilities. In this work, a runtime strategy is proposed to maximize performance under a given power budget by distributing the available power according to the relative GPU utilization. Time series forecasting methods were used to develop workload prediction models that provide accurate prediction of GPU utilization during application execution. Experiments were performed on a multi-GPU computing platform DGX-1 equipped with eight NVIDIA V100 GPUs used for quantum chemistry calculations in the GAMESS package. For a limited power budget, the proposed strategy …
Efficient Removal Of Lead Ions From Aqueous Media Using Sustainable Sources On Marine Algae, Hannah Namkoong, Erik Biehler, Gon Namkoong, Tarek M. Abdel-Fattah
Efficient Removal Of Lead Ions From Aqueous Media Using Sustainable Sources On Marine Algae, Hannah Namkoong, Erik Biehler, Gon Namkoong, Tarek M. Abdel-Fattah
Electrical & Computer Engineering Faculty Publications
The goal of this project is to explore a new method to efficiently remove Pb(II) ions from water by processing Undaria pinnatifida into immobilized beads using sodium alginate and calcium chloride. The resulting biosorbent was characterized by Fourier transform infrared spectroscopy (FTIR) and scanning electron microscopy coupled with energy-dispersive X-ray spectroscopy (SEM-EDS). Using immobilized U. pinnatifida, we investigated the effect of various factors on Pb(II) ion removal efficiency such as temperature, pH, ionic strength, time, and underlying biosorption mechanisms. For Pb(II) ion biosorption studies, Pb(II) ion biosorption data were obtained and analyzed using Langmuir and Freundlich adsorption models. It …
Arithfusion: An Arithmetic Deep Model For Temporal Remote Sensing Image Fusion, Md Reshad Ul Hoque, Jian Wu, Chiman Kwan, Krzysztof Koperski, Jiang Li
Arithfusion: An Arithmetic Deep Model For Temporal Remote Sensing Image Fusion, Md Reshad Ul Hoque, Jian Wu, Chiman Kwan, Krzysztof Koperski, Jiang Li
Electrical & Computer Engineering Faculty Publications
Different satellite images may consist of variable numbers of channels which have different resolutions, and each satellite has a unique revisit period. For example, the Landsat-8 satellite images have 30 m resolution in their multispectral channels, the Sentinel-2 satellite images have 10 m resolution in the pan-sharp channel, and the National Agriculture Imagery Program (NAIP) aerial images have 1 m resolution. In this study, we propose a simple yet effective arithmetic deep model for multimodal temporal remote sensing image fusion. The proposed model takes both low- and high-resolution remote sensing images at t1 together with low-resolution images at a …
Beyond The Green Iron Cage: Exploring The Macro And Micro-Level Influences On Executive Decisions About Sustainability Investments In Small And Medium Size Firms, Igor Estraykh
Theses and Dissertations
Although research on corporate environmental sustainability has shed light on different aspects of organizational and individual level factors that influence corporate decisions, it does not fully account for how individual executives within firms react to these forces and make decisions, specifically within small to medium size enterprises (SMEs). This study used a grounded theory approach to interview 19 SME executives from 13 different industries to explore how organizational and individual level factors influence their ability to evaluate and make decisions related to sustainability initiatives. The study found that SME executives faced isomorphic pressures for sustainability, individual agency pressures, significant resource …
Minimum Dataset And Metadata Guidelines For Soil-Test Correlation And Calibration Research, Nathan A. Slaton, Sarah E. Lyons, Deanna L. Osmond, Sylvie M. Brouder, Steve W. Culman, Gerson L. Drescher, Luciano C. Gatiboni, John Hoben, Peter J.A. Kleinman, Joshua M. Mcgrath, Robert O. Miller, Austin Pearce, Amy L. Shober, John T. Spargo, Jeff J. Volenec
Minimum Dataset And Metadata Guidelines For Soil-Test Correlation And Calibration Research, Nathan A. Slaton, Sarah E. Lyons, Deanna L. Osmond, Sylvie M. Brouder, Steve W. Culman, Gerson L. Drescher, Luciano C. Gatiboni, John Hoben, Peter J.A. Kleinman, Joshua M. Mcgrath, Robert O. Miller, Austin Pearce, Amy L. Shober, John T. Spargo, Jeff J. Volenec
Crop, Soil and Environmental Sciences Faculty Publications and Presentations
Soil-test correlation and calibration data are essential to modern agriculture, and their continued relevance is underscored by the expansion of precision farming and the persistence of sustainable soil management priorities. In support of transparent, science-based fertilizer recommendations, we seek to establish a core set of required and recommended information for soil-test P and K correlation and calibration studies, a minimum dataset, building on previous research. The Fertilizer Recommendation Support Tool (FRST) project team and collaborators are developing a national database that will support a soil-test-based nutrient management decision aid tool. The FRST team includes over 80 scientists from 37 land-grant …
Role Of Imine Isomerization In The Stereocontrol Of The Staudinger Reaction Between Ketenes And Imines, Fernando P. Cossío, Abel De Cózar, Miguel A. Sierra, Luis Casarrubios, Jaime G. Muntaner, Bimal K. Banik, Debasish Bandyopadhyay
Role Of Imine Isomerization In The Stereocontrol Of The Staudinger Reaction Between Ketenes And Imines, Fernando P. Cossío, Abel De Cózar, Miguel A. Sierra, Luis Casarrubios, Jaime G. Muntaner, Bimal K. Banik, Debasish Bandyopadhyay
School of Integrative Biological & Chemical Sciences (Formerly Dept. of Chemistry)
Computational–experimental analysis has allowed determining that the stereochemistry of the Staudinger reaction between ketenes and imines is strongly associated with the nature of the imine, which affects the two steps of the reaction. The first step, namely the nucleophilic attack of the sp2-hybridized nitrogen atom of the imine on the sp-hybridized carbon atom of the ketene, is affected by the energetically accessible in situ isomerization patterns of the imine. The second step consists of a conrotatory electrocyclization of the zwitterionic intermediate formed in the previous step. This latter pericyclic step depends on the inward/outward torquoelectronic effects generated by the substituents …
Boundedness Of Some Multi-Parameter Fiber-Wise Multiplier Operators, Frédéric Bernicot, Polona Durcik
Boundedness Of Some Multi-Parameter Fiber-Wise Multiplier Operators, Frédéric Bernicot, Polona Durcik
Mathematics, Physics, and Computer Science Faculty Articles and Research
We prove Lp estimates for various multi-parameter bi- and trilinear operators with symbols acting on fibers of the two-dimensional functions. In particular, this yields estimates for the general bi-parameter form of the twisted paraproduct studied in [V. Kovač, Boundedness of the twisted paraproduct. Rev. Mat. Iberoam. 28 (2012), no. 4, 1143–1164.].
A Simple And Robust Alternative To Bland-Altman Method Of Assessing Clinical Agreement, Abhaya Indrayan Prof
A Simple And Robust Alternative To Bland-Altman Method Of Assessing Clinical Agreement, Abhaya Indrayan Prof
COBRA Preprint Series
Clinical agreement between two quantitative measurements on a group of subjects is generally assessed with the help of the Bland-Altman (B-A) limits. These limits only describe the dispersion of disagreements in 95% cases and do not measure the degree of agreement. The interpretation regarding the presence or absence of agreement by this method is based on whether B-A limits are within the pre-specified externally determined clinical tolerance limits. Thus, clinical tolerance limits are necessary for this method. We argue in this communication that the direct use of clinical tolerance limits for assessing agreement without the B-A limits is more effective …
Studying Spread Patterns Of Covid-19 Based On Spatiotemporal Data, Beiyu Lin, Xiaowei Jia, Zhiqian Chen
Studying Spread Patterns Of Covid-19 Based On Spatiotemporal Data, Beiyu Lin, Xiaowei Jia, Zhiqian Chen
Computer Science Faculty Publications
The current COVID-19 epidemic have transformed every aspect of our lives, especially our behavior and routines. These changes have been drastically impacting the economy in each region, such as local restaurants and transportation systems. With massive amounts of ambient data being collected everywhere, we now can develop innovative algorithms to have a much greater understanding of epidemic spread patterns of COVID-19 based on spatiotemporal data. The findings will open up the possibility to design adaptive planning or scheduling systems that will help preventing the spread of COVID-19 and other infectious diseases.
In this tutorial, we will review the trending state-of-theart …
Machine Learning Land Cover And Land Use Classification Of 4-Band Satellite Imagery, Lorelei Turner, Torrey J. Wagner, Paul Auclair, Brent T. Langhals
Machine Learning Land Cover And Land Use Classification Of 4-Band Satellite Imagery, Lorelei Turner, Torrey J. Wagner, Paul Auclair, Brent T. Langhals
Faculty Publications
Land-cover and land-use classification generates categories of terrestrial features, such as water or trees, which can be used to track how land is used. This work applies classical, ensemble and neural network machine learning algorithms to a multispectral remote sensing dataset containing 405,000 28x28 pixel image patches in 4 electromagnetic frequency bands. For each algorithm, model metrics and prediction execution time were evaluated, resulting in two families of models; fast and precise. The prediction time for an 81,000-patch group of predictions wasmodels, and >5s for the precise models, and there was not a significant change in prediction time when a …
Microsoft Defender Will Be Defended: Memoryranger Prevents Blinding Windows Av, Denis Pogonin, Igor Korkin, Phd
Microsoft Defender Will Be Defended: Memoryranger Prevents Blinding Windows Av, Denis Pogonin, Igor Korkin, Phd
Annual ADFSL Conference on Digital Forensics, Security and Law
Windows OS is facing a huge rise in kernel attacks. An overview of popular techniques that result in loading kernel drivers will be presented. One of the key targets of modern threats is disabling and blinding Microsoft Defender, a default Windows AV. The analysis of recent driver-based attacks will be given, the challenge is to block them. The survey of user- and kernel-level attacks on Microsoft Defender will be given. One of the recently published attackers’ techniques abuses Mandatory Integrity Control (MIC) and Security Reference Monitor (SRM) by modifying Integrity Level and Debug Privileges for the Microsoft Defender via syscalls. …
Human-Controlled Fuzzing With Afl, Maxim Grishin, Igor Korkin, Phd
Human-Controlled Fuzzing With Afl, Maxim Grishin, Igor Korkin, Phd
Annual ADFSL Conference on Digital Forensics, Security and Law
Fuzzing techniques are applied to reveal different types of bugs and vulnerabilities. American Fuzzy Lop (AFL) is a free most popular software fuzzer used by many other fuzzing frameworks. AFL supports autonomous mode of operation that uses the previous step output into the next step, as a result fuzzer spends a lot of time analyzing minor code sections. By making fuzzing process more focused and human controlled security expert can save time and find more bugs in less time. We designed a new module that can fuzz only the specified functions. As a result, the chosen ones will be inspected …
Application Of Artificial Intelligence To Plasma Metabolomics Profiles To Predict Response To Neoadjuvant Chemotherapy In Triple-Negative Breast Cancer, Ehsan Irajizad, Ranran Wu, Jody Vykoukal, Eunice Murage, Rachelle Spencer, Stacy Moulder, Bora Lim, Jennifer Litton, Debu Tripathym, Vicente Valero, Senthil Damodaran, Gaiane M Rauch, Beatriz Adrada, Rosalind Candelaria, Jason B White, Abenaa Brewster, Banu Arun, James P Long, Kim Anh Do, Sam Hanash, Johannes F Fahrmann
Application Of Artificial Intelligence To Plasma Metabolomics Profiles To Predict Response To Neoadjuvant Chemotherapy In Triple-Negative Breast Cancer, Ehsan Irajizad, Ranran Wu, Jody Vykoukal, Eunice Murage, Rachelle Spencer, Stacy Moulder, Bora Lim, Jennifer Litton, Debu Tripathym, Vicente Valero, Senthil Damodaran, Gaiane M Rauch, Beatriz Adrada, Rosalind Candelaria, Jason B White, Abenaa Brewster, Banu Arun, James P Long, Kim Anh Do, Sam Hanash, Johannes F Fahrmann
Faculty, Staff and Student Publications
There is a need to identify biomarkers predictive of response to neoadjuvant chemotherapy (NACT) in triple-negative breast cancer (TNBC). We previously obtained evidence that a polyamine signature in the blood is associated with TNBC development and progression. In this study, we evaluated whether plasma polyamines and other metabolites may identify TNBC patients who are less likely to respond to NACT. Pre-treatment plasma levels of acetylated polyamines were elevated in TNBC patients that had moderate to extensive tumor burden (RCB-II/III) following NACT compared to those that achieved a complete pathological response (pCR/RCB-0) or had minimal residual disease (RCB-I). We further applied …
An Autoencoder-Based Deep Learning Method For Genotype Imputation, Meng Song, Jonathan Greenbaum, Joseph Luttrell, Weihua Zhou, Chong Wu, Chuan Qiu, Kuan-Jui Su, Qing Tian, Hui Shen, Huixiao Hong, Ping Gong, Xinghua Shi, Hong-Wen Deng, Chaoyang Zhang
An Autoencoder-Based Deep Learning Method For Genotype Imputation, Meng Song, Jonathan Greenbaum, Joseph Luttrell, Weihua Zhou, Chong Wu, Chuan Qiu, Kuan-Jui Su, Qing Tian, Hui Shen, Huixiao Hong, Ping Gong, Xinghua Shi, Hong-Wen Deng, Chaoyang Zhang
Faculty, Staff and Student Publications
Genotype imputation has a wide range of applications in genome-wide association study (GWAS), including increasing the statistical power of association tests, discovering trait-associated loci in meta-analyses, and prioritizing causal variants with fine-mapping. In recent years, deep learning (DL) based methods, such as sparse convolutional denoising autoencoder (SCDA), have been developed for genotype imputation. However, it remains a challenging task to optimize the learning process in DL-based methods to achieve high imputation accuracy. To address this challenge, we have developed a convolutional autoencoder (AE) model for genotype imputation and implemented a customized training loop by modifying the training process with a …