Physical Sciences and Mathematics Commons^™

Soil Resilience And Arbuscular Mycorrhizal Fungi: How Fungi Can Inform Climate Change Mitigation And Adaptation In Maya Milpa Management, Courtney Mathers

Electronic Theses and Dissertations

In Mexico’s state of Yucatán, climate change impacts like prolonged and less predictable dry season length are manifesting as threats to agricultural production and food security. Nearly two thirds of Yucatán’s population is indigenous, many of whom live in rural communities that rely on rainfed subsistence agriculture (INEGI 2015). Ensuring sufficient food production in the face of climate change relies on the quality of agricultural soils. With both mismanagement of agricultural soils and climate change posing as threats to food production in Mexico, soil management practices that increase a soil quality should be identified and promoted. The primary objective of …

Investigating Spatiotemporal Kinetics, Dynamics, And Mechanism Of Exosome Release, Anarkali Mahmood

Electronic Theses and Dissertations

Exosomes are small lipid-based vesicles that can carry biomolecules from one cell to another. While exosomes are crucial to maintain homeostasis in healthy cells, they are exploited by unhealthy cells to aid disease progression. Exosomes likely facilitate disease progression via the transfer of disease-causing biomolecules from unhealthy to healthy cells. Exosomes are generated in Multivesicular endosomes (MVEs) and are then secreted into the extracellular space to travel to other cells. Despite being a crucial step, very little is known about exosomes release mechanism and dynamics. To further our understanding of exosomes, specifically their secretion, my work has focused on investigating …

Automatic Transformation Of Natural To Unified Modeling Language: A Systematic Review, Sharif Ahmed, Arif Ahmed, Nasir U. Eisty

Computer Science Faculty Publications and Presentations

Context: Processing Software Requirement Specifications (SRS) manually takes a much longer time for requirement analysts in software engineering. Researchers have been working on making an automatic approach to ease this task. Most of the existing approaches require some intervention from an analyst or are challenging to use. Some automatic and semi-automatic approaches were developed based on heuristic rules or machine learning algorithms. However, there are various constraints to the existing approaches to UML generation, such as restrictions on ambiguity, length or structure, anaphora, incompleteness, atomicity of input text, requirements of domain ontology, etc. Objective: This study aims to better understand …

The De Rham Decomposition Theorem, Ian M. Anderson, Charles G. Torre

Tutorials on... in 1 hour or less

In this worksheet we show how the DG software provides for a local implementation of the de Rham decomposition theorem for Riemannian manifolds.

Measurement Of B (Bs →Dsx) With Bs Semileptonic Tagging, B. Wang, K. Kinoshita, H. Aihara, D. M. Asner, T. Aushev, R. Ayad, V. Babu, I. Badhrees, A. M. Bakich, P. Behera, C. Beleño, J. Bennett, M. Bessner, V. Bhardwaj, T. Bilka, J. Biswal, A. Bobrov, G. Bonvicini, A. Bozek

Faculty and Student Publications

We report the first direct measurement of the inclusive branching fraction B(Bs→DsX) via Bs tagging in e+e-→ (5S) events. Tagging is accomplished through a partial reconstruction of semileptonic decays Bs→DsXℓν, where X denotes unreconstructed additional hadrons or photons and ℓ is an electron or muon. With 121.4 fb-1 of data collected at the (5S) resonance by the Belle detector at the KEKB asymmetric-energy e+e- collider, we obtain B(Bs→DsX)=(60.2±5.8±2.3)%, where the first uncertainty is statistical and the second is systematic.

Toi-2257 B: A Highly Eccentric Long-Period Sub-Neptune Transiting A Nearby M Dwarf, N. Schanche, F. J. Pozuelos, M. N. Günther, R. D. Wells, A. J. Burgasser, P. Chinchilla, L. Delrez, E. Ducrot, L. J. Garcia, Y. Gómez Maqueo Chew, E. Jofré, B. V. Rackham, D. Sebastian, K. G. Stassun, D. Stern, M. Timmermans, K. Barkaoui, A. Belinski, Z. Benkhaldoun, W. Benz, A. Bieryla, F. Bouchy, A. Burdanov, D. Charbonneau, J. L. Christiansen, K. A. Collins, B.-O. Demory, M. Dévora-Pajares, J. De Wit, D. Dragomir, G. Dransfield, E. Furlan, M. Ghachoui, M. Gillon, C. Gnilka, M. A. Gómez-Muñoz, N. Guerrero, M. Harris, K. Heng, C. E. Henze, K. Hesse, S. B. Howell, E. Jehin, J. Jenkins, Eric L.N. Jensen, M. Kunimoto, D. W. Latham, K. Lester, K. K. Mcleod, I. Mireles, C. A. Murray, P. Niraula, P. P. Pedersen, D. Queloz, E. V. Quintana, G. Ricker, A. Rudat, L. Sabin, B. Safonov, U. Schroffenegger, N. Scott, S. Seager, I. Strakhov, A. H. M. J. Triaud, R. Vanderspek, M. Vezie, J. Winn

Physics & Astronomy Faculty Works

Context. Thanks to the relative ease of finding and characterizing small planets around M-dwarf stars, these objects have become cornerstones in the field of exoplanet studies. The current paucity of planets in long-period orbits around M dwarfs makes such objects particularly compelling as they provide clues about the formation and evolution of these systems. Aims. In this study we present the discovery of TOI-2257 b (TIC 198485881), a long-period (35 d) sub-Neptune orbiting an M3 star at 57.8 pc. Its transit depth is about 0.4%, large enough to be detected with medium-size, ground-based telescopes. The long transit duration …

Modulation Of Human Gut Microbiota Through Dietary Associations, Sumudu Sasanka Rajakaruna

Browse all Theses and Dissertations

Study of human gut microbiota is becoming widely popular in recent years, especially due to numerous beneficial aspects attributed to this diverse and complex microbial communities. Followingly, there is a keen interest in understanding the dynamics and subsequent modulation of human gut microbiota, from a health perspective. Diet is considered significant in shaping gut microbiota community and functions, predominantly due to dietary macro and micronutrient content. Subsequently, a plethora of research is carried out on the effects of dietary nutrients on gut microbiota. Dietary patterns, quality of the diet, differences in food preparation methods, physiological and chemical changes occurred during …

Virtual Reality-Based Serious Role-Playing Games As Digital Experiential Learning Tools To Deliver Healthcare Skills Through Mobile Devices, Dixit Bharatkumar Patel

Browse all Theses and Dissertations

Inadequate professional training and practices related to health care may result in severe complications to care experiences and outcomes. Moreover, healthcare professionals are as susceptible to the possibility of implicit biases as any other group. Importantly, the health care training is critical and challenging as minor prejudicial beliefs have an adverse influence or serious consequences on patients' health outcomes. Thus, facilitating serious role-playing virtual care practices along with raising awareness of healthcare professionals about the enduring impact of implicit/explicit biases and Social Determinants of Health (SDH) on health outcomes assist to advance the patient-provider relation, care experiences (e.g., healthcare experience …

Benzothiazole-Substituted Boron Difluoride Formazanate Dyes, Francis L. Buguis, Paul D. Boyle, Joe B. Gilroy

Chemistry Publications

The incorporation of benzothiazole heterocycles into existing molecular frameworks has resulted in the production of a wide range of multifunctional molecular materials. However, this strategy has not yet been explored for an emerging class of boron difluoride dyes, derived from formazanate ligands, which often exhibit tuneable redox and optical properties. Here, we address this gap in the literature and describe the synthesis and characterization of a series of benzothiazole-substituted BF­₂ formazanates. The incorporation of benzothiazole resulted in absorption profiles that were shifted to lower energies and reduction events that were shifted to more positive potentials when compared to those …

Understanding The Enumerated World: Making Sense Of Data As An Information Source, Kristi Thompson, Elizabeth Hill, Alexandra Cooper

Western Libraries Publications

Chapter in ACRL publication The Data Literacy Cookbook.

This recipe is a guide to preparing an instructional session aimed at postsecondary students in the social or health sciences or related disciplines on locating, evaluating, and using secondary data sources as information resources. Who collects data? Where can you access them? Why are data available on some topics and not others? Why are some statistics available at a detailed level of geography and others only nationally? What are some key limitations of official statistics, and where can information be found to fill in the gaps? This recipe uses these questions to …

What Braiding Reveals About River Morphology, Bedload And Channel Change, Peter Ashmore

Geography & Environment Presentations

Braided rivers can appear to be outliers in the range of river morphological types with unique dynamics and processes. Analysis shows that they have systematic structure, dynamics and response to external change that have properties relevant to the continuum of channel morphology. Rapid morphological change in real time creates a system in which bedload transport is strongly morphologically driven, which leads to thinking about bedload thresholds in terms of morphological change rather than grain scale dynamics. Occurrence and complexity of braiding respond to total stream power, and channel pattern is therefore partly an effect of river size. Braided rivers have …

What Braiding Reveals About River Morphology, Bedload And Channel Change, Peter Ashmore

Geography & Environment Publications

Braided rivers can appear to be outliers in the range of river morphological types with unique dynamics and processes. Analysis shows that they have systematic structure, dynamics and response to external change that have properties relevant to the continuum of channel morphology. Rapid morphological change in real time creates a system in which bedload transport is strongly morphologically driven, which leads to thinking about bedload thresholds in terms of morphological change rather than grain scale dynamics. Occurrence and complexity of braiding respond to total stream power, and channel pattern is therefore partly an effect of river size. Braided rivers have …

Braiding, Peter Ashmore

Geography & Environment Publications

Braided rivers have multiple, unstable channels and ephemeral bars formed by intense bed-load transport, and active channel processes. They occur in a range of environments associated with high-energy, coarse bedded rivers with limited riparian vegetation, and relatively high sediment supply. The occurrence in some regions is strongly modified by human activity. Empirical and rational analysis of regime conditions and in-channel process mechanisms can predict occurrence of braiding, considering by the problem of gradual transitions between channel pattern types, transient flood influence and vegetation effects. Braided rivers have hydraulic geometry relations similar to those of single-thread channels as well as systematic …

What Uae Software Students Think About Software Testing: A Replicated Study, Luiz Fernando Capretz, Saad Harous, Ali Bou Nassif

Electrical and Computer Engineering Publications

Software testing is vital to improve software quality. However, software tester role is stigmatized, partly due to misperception and partly due to the treatment of the testing process within the software industry. The present study analyses this situation aiming to explore what might inhibit an individual from taking up a software testing career. In order to investigate this issue, we surveyed 132 senior students pursuing degrees in information systems, information and communication technology, computer science, computer engineering, software engineering, and other closely-related disciplines at three universities in the United Arab Emirates: two publicly funded and one top-notch private university. The …

Games For One, Games For Two: Computationally Complex Fun For Polynomial-Hierarchical Families, Kye Shi

HMC Senior Theses

In the first half of this thesis, we explore the polynomial-time hierarchy, emphasizing an intuitive perspective that associates decision problems in the polynomial hierarchy to combinatorial games with fixed numbers of turns. Specifically, problems in �� are thought of as 0-turn games, ���� as 1-turn “puzzle” games, and in general ��ₖ�� as ��-turn games, in which decision problems answer the binary question, “can the starting player guarantee a win?” We introduce the formalisms of the polynomial hierarchy through this perspective, alongside definitions of ��-turn CIRCUIT SATISFIABILITY games, whose ��ₖ��-completeness is assumed from prior work (we briefly justify this assumption …

Accuracy And Practical Considerations For Doubly Labeled Water Analysis In Nutrition Studies Using A Laser-Based Isotope Instrument (Off-Axis Integrated Cavity Output Spectroscopy), Linda M. Reynard, William W. Wong, Noreen Tuross

Geosciences Faculty Publications and Presentations

Background: Given the utility of the doubly labeled water (DLW) method for determination of energy expenditure, additional techniques for isotope analysis of the samples are welcome. Laser-based instruments are one such new analytical tool, but their accuracy and feasibility for DLW studies are grossly understudied.

Objectives: We assessed the accuracy of laser-based isotope ratio measurements as part of the DLW method for estimation of carbon dioxide production rate (rCO₂) and total energy expenditure (TEE), in between-group comparison study designs.

Methods: Urine samples from a previous study were analyzed with a laser-based instrument [off-axis integrated cavity output spectroscopy (OA-ICOS)]. …

Long-Read Sequencing Of The Zebrafish Genome Reorganizes Genomic Architecture, Yelena Chernyavskaya, Xiaofei Zhang, Jinze Liu, Jessica Blackburn

Biostatistics Publications

Background

Nanopore sequencing technology has revolutionized the field of genome biology with its ability to generate extra-long reads that can resolve regions of the genome that were previously inaccessible to short-read sequencing platforms. Over 50% of the zebrafish genome consists of difficult to map, highly repetitive, low complexity elements that pose inherent problems for short-read sequencers and assemblers.

Results

We used long-read nanopore sequencing to generate a de novo assembly of the zebrafish genome and compared our assembly to the current reference genome, GRCz11. The new assembly identified 1697 novel insertions and deletions over one kilobase in length and placed …

Selective Reduction Of Nitriles In The Presence Of Aromatic Nitro Groups, Jeffrey D. Amidon, Michael Barbachyn

Summer Research

• Establish proof of concept and define optimal conditions for an aprotic reduction of a nitrile.
• Examine a range of compounds to determine the scope of the optimal conditions.

Great Lakes Paleoclimate Review, Luke Atma, Melinda C. Higley

Summer Research

The picture of Great Lakes Region (GLR) climate since deglaciation (about 14,000 years ago) is unclear, especially in terms of the hydroclimate (how dry, or rainy, or windy it has been). It is important to have information about past environments, and periods of past climate changes, to inform how we think about current/future climate changes, especially at regional scales. Understanding the climate of the past requires proxies for past environmental conditions, such as charcoal, pollen, or microfossils preserved in lake mud. But assessing climate change over geological time scales in the GLR is complicated by a lack of such sedimentary …

Extremely Broad Ly Α Line Emission From The Molecular Intragroup Medium In Stephan's Quintet: Evidence For A Turbulent Cascade In A Highly Clumpy Multiphase Medium?, P. Guillard, P. N. Appleton, F. Boulanger, J. M. Shull, M. D. Lehnert, G. Pineau Des Forets, E. Falgarone, M. E. Cluver, C. K. Xu, Sarah C. Gallagher, P. A. Duc

Physics and Astronomy Publications

We present Hubble Space Telescope Cosmic Origin Spectrograph (COS) UV line spectroscopy and integral-field unit (IFU) observations of the intragroup medium in Stephan's Quintet (SQ). SQ hosts a 30 kpc long shocked ridge triggered by a galaxy collision at a relative velocity of 1000 km s-1, where large amounts of molecular gas coexist with a hot, X-ray-emitting, plasma. COS spectroscopy at five positions sampling the diverse environments of the SQ intragroup medium reveals very broad (≈2000 km s-1) Lyα line emission with complex line shapes. The Lyα line profiles are similar to or much broader than those of Hβ, [C …

Estimating Efforts For Various Activities In Agile Software Development: An Empirical Study, Lan Cao

Information Technology & Decision Sciences Faculty Publications

Effort estimation is an important practice in agile software development. The agile community believes that developers’ estimates get more accurate over time due to the cumulative effect of learning from short and frequent feedback. However, there is no empirical evidence of an improvement in estimation accuracy over time, nor have prior studies examined effort estimation in different development activities, which are associated with substantial costs. This study fills the knowledge gap in the field of software estimation in agile software development by investigating estimations across time and different development activities based on data collected from a large agile project. This …

Realization Of A Micro-Cavity Via The Integration Of Silicon Nitride And Lithium Niobate Using Micro Transfer Printing, Adarsh Ananthachar, Maria V. Kotlyar, Samir Ghosh, Sarvagya Dwivedi, Simone Iadanza, Liam O'Faolain, Shamsul Arafin, Brian Corbett

Conference Papers

We combine Lithium Niobate and Silicon Nitride using transfer printing and realize a micro-cavity with an experimentally measured intrinsic Q-factors of 50,000. We believe this is the first realization of such type of a micro-cavity.

Oxide Two-Dimensional Electron Gas With High Mobility At Room-Temperature, K. Eom, H. Paik, J. Seo, N. Campbell, Evgeny Y. Tsymbal, S. H. Oh, M. Rzchowski, D. G. Schlom, Chang-Beom Eom

Evgeny Tsymbal Publications

No abstract provided.

Ferroelectric Control Of Magnetic Skyrmions In Two-Dimensional Van Der Waals Heterostructures, K. Huang, Ding-Fu Shao, Evgeny Y. Tsymbal

Evgeny Tsymbal Publications

No abstract provided.

Tilted Spin Current Generated By The Collinear Antiferromagnet Ruo2, A. Bose, N. J. Schreiber, R. Jain, Ding-Fu Shao, H. P. Nair, J. Sun, X. S. Zhang, D. A. Muller, D. A. Muller, Evgeny Y. Tsymbal, D. G. Schlom, D. C. Ralph

Evgeny Tsymbal Publications

No abstract provided.

Decolorization Of Synthetic Textile Dyes By Fungal Endophytes Isolated From The Leaves Of Philippine Mangrove (Avicennia Marina), Steve P. Obanan, Resureccion B. Sadaba, Pamela Alva-Gatchalian, Annabelle V. Cadiz, Evelyn M. Basilio, Dennis B. Bela-Ong

Biology Faculty Publications

Textile dyes in wastewater can be harmful pollutants when released into the environment without treatment. Biodegradation of textile dye effluents by different microbes, including fungi, has become popular as an alternative to physicochemical methods. The mangrove Avicennia marina is known to harbor endophytic fungi which have the potential to carry out dye degradation. Therefore, this study assessed the ability to decolorize synthetic dyes of endophytic fungi isolated from the leaves of A. marina. Of the nine fungal endophytes, Aspergillus niger, Syncephalastrum racemosum and Penicillium citrinum exhibited the highest mycelial growths in solid media, while all endophytes adsorbed Congo red. Through …

2022 Report To The Governor: Utah's Land, Water, And Air, Janet Quinney Lawson Institute For Land, Water, And Air

Reports

This report serves as a 2022 snapshot of key issues and concerns with Utah's shared resources. It highlights gathered data that is available to provide context to these issues, as well as identifies areas where more study is needed. Addressing these challenges will enable Utah policymakers and other statewide leaders to make informed decisions for the future. Under the authorship of 37 researchers and experts and the general guidance of 38 advisory committee members, the report outlines 26 issues and trends to pay attention to in the coming months and years.

What's New In Differentialgeometry Release Dg2022, Ian M. Anderson, Charles G. Torre

Tutorials on... in 1 hour or less

This Maple worksheet demonstrates the salient new features and functionalities of the 2022 release of the DifferentialGeometry software package.

When Is A Linear Connection A Metric Connection?, Ian M. Anderson, Charles G. Torre

Tutorials on... in 1 hour or less

In this worksheet we use the DG software to answer the following question: When is there a metric tensor on M whose Christoffel symbols coincide with the components of a given linear connection?

Future Climate Streamflow Estimation In The Donnelly River Catchment, Justin Hughes, Bill Wang

Natural resources commissioned reports

The Donnelly River is located in the south-west of Western Australia. An irrigation development has been proposed in the catchment that would extract water from the Donnelly River and store this in an off stream reservoir for irrigation use. Given the known issues related to non-stationarity and hydrological prediction, the Department of Primary Industries and Regional Development (DPIRD) contracted CSIRO to review the hydrological model that was used to estimate future climate streamflow in the Donnelly River. This model was owned and operated by the Department of Water and Environmental Regulation (DWER). The CSIRO review of the model, which also …