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Articles 2521 - 2550 of 294507

Full-Text Articles in Physical Sciences and Mathematics

Using Low-Frequency Vibrational Spectroscopy To Develop Analytical Profiles For Polymorphic Organic Molecular Crystals, Salvatore Zarrella Jun 2026

Using Low-Frequency Vibrational Spectroscopy To Develop Analytical Profiles For Polymorphic Organic Molecular Crystals, Salvatore Zarrella

Dissertations - ALL

Low-frequency vibrational spectroscopy provides a sensitive approach for characterizing polymorphism and intermolecular dynamics in organic molecular crystals. Terahertz time-domain spectroscopy (THz-TDS) and low-frequency Raman spectroscopy probe collective lattice vibrations arising from weak intermolecular interactions, offering direct insight into crystal packing, phase stability, and structural organization that is often inaccessible to conventional diffraction and mid-infrared techniques. To interpret these modes, experimental measurements are combined with periodic solid-state density functional theory (ss-DFT), which enables vibrational assignments to specific intermolecular motions, and crystal structure prediction (CSP), which maps accessible polymorphic energy landscapes. Together, these methods form a unified experimental–computational framework for understanding molecular …

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(R2138) Analytical Approaches To Integral Equations In The Dynamics Of The Oblate Spheroidal: Earth-Sun-Satellite System, Kumari Ranjana, M. Shahbaz Ullah, M. Javed Idrisi Jun 2026

(R2138) Analytical Approaches To Integral Equations In The Dynamics Of The Oblate Spheroidal: Earth-Sun-Satellite System, Kumari Ranjana, M. Shahbaz Ullah, M. Javed Idrisi

Applications and Applied Mathematics: An International Journal (AAM)

The deployment of artificial satellites in different gravitational environments has significantly impacted space exploration. We have introduced the study of artificial satellites under the influence of gravitational forces from oblate spheroids. To confront complex obstacles the myriads of both numerical and analytical techniques have been formulated. Among these methods, a new approach involving the integration of integral equations has been introduced. This innovative approach has been applied to study the trajectories of artificial satellites as they navigate the gravitational influence of oblate spheroids. Suitable kernels have been carefully chosen to solve the integral equations. The solutions have been found and …

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(R2129) Layer Resolving Classical Scheme For A System Of N Time-Dependent Singularly Perturbed Problems With Spatial Delay And Robin Initial Conditions, K. Ramiya Bharathi, G. E. Chatzarakis, M. Joseph Paramasivam Jun 2026

(R2129) Layer Resolving Classical Scheme For A System Of N Time-Dependent Singularly Perturbed Problems With Spatial Delay And Robin Initial Conditions, K. Ramiya Bharathi, G. E. Chatzarakis, M. Joseph Paramasivam

Applications and Applied Mathematics: An International Journal (AAM)

This article deals with solving a system of n time-dependent singularly perturbed problems with spatial delay and robin initial conditions. Each equation’s leading term is multiplied by a distinct small positive parameter, inducing overlapping initial layers. Due to presence of these parameters and delay terms, intricate layers occur at interior regions of the domain. To capture the behavior of these layers the solution is decomposed into two components and layer functions are also formulated. The formulation of the layer resolving numerical scheme involves temporal and spatial discretization on uniform and piecewise uniform Shishkin meshes respectively. The proposed framework is found …

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An Overlooked Terrestrial Archive: Freshwater Cements And Hydroclimate Signals In Quaternary Glaciogenic Deposits, Owen F. Mccaffrey, Ian Z. Winkelstern, Tara A. Kneeshaw, Melinda C. Higley Jun 2026

An Overlooked Terrestrial Archive: Freshwater Cements And Hydroclimate Signals In Quaternary Glaciogenic Deposits, Owen F. Mccaffrey, Ian Z. Winkelstern, Tara A. Kneeshaw, Melinda C. Higley

University Faculty Publications and Creative Works

Quaternary glaciogenic deposits, which serve as vital groundwater aquifers, are often partially cemented with carbonate minerals, but the timing of emplacement of these cements and their geochemical conditions of formation remain understudied. Here, we integrated petrography, δ18O, Mg/Ca, and clumped isotope (Δ47) data from two calcitecemented outcrops in western Michigan (USA) to investigate the origin of glacial sediment cements. The two sites have contrasting topographic and textural settings reflecting distinct formation conditions. The elevated Wabasis Lake deposit records sequential phreatic-to-vadose cementation, while the Cherry Valley Sands site, very close to the modern water table, shows a …

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From Detection To Segmentation: A Foundation Model Approach To Organoid Brightfield Image Analysis Using Sam 3, Hiren Manani Jun 2026

From Detection To Segmentation: A Foundation Model Approach To Organoid Brightfield Image Analysis Using Sam 3, Hiren Manani

Theses - ALL

This thesis presents the first systematic application of SAM 3, a unified foundation model for promptable segmentation, to mouse small intestinal organoid brightfield microscopy image analysis. The work spans the complete pipeline from zero-shot baseline evaluation through domain-specific fine-tuning on a GPU cluster, and documents the full engineering process required to adapt a state-of-the-art foundation model to a novel biomedical imaging domain. A comprehensive literature review of over 20 papers spanning detection-based, classical segmentation, foundation model, and morphological analysis approaches identified a clear research gap that this thesis addresses. Five critical compatibility patches were developed to deploy SAM 3 on …

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Atomistic Simulations Of Crystallographic Anisotropy And Defects In Shock Loading, Benjamin P. Helman, Andre Archer, Logan Nagy, Samuel C. Wagers, Douglas E. Spearot, Adib J. Samin Jun 2026

Atomistic Simulations Of Crystallographic Anisotropy And Defects In Shock Loading, Benjamin P. Helman, Andre Archer, Logan Nagy, Samuel C. Wagers, Douglas E. Spearot, Adib J. Samin

Faculty Publications

The impact of crystallographic orientation, select grain boundaries, and vacancies on the shock response of aluminum was investigated using molecular dynamics simulations. Shock loading in the [001], [011], and [111] directions was explored, revealing anisotropic behavior in shock speed, generated dislocation density, and melting. The Hugoniot elastic limit (HEL) in the [100], [110], and [111] directions were calculated as 18.7 GPa, 17.8 GPa, and 22.5 GPa, respectively. These results were found to be an order of magnitude larger than the uniaxial compressive yield strengths computed at high strain rate using an affine loading scheme. Metastable melting in the [011] and …

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Constrained Neural Intelligence: Investigations Into Deep Multi-Objective Optimization, Naveed Tahir Jun 2026

Constrained Neural Intelligence: Investigations Into Deep Multi-Objective Optimization, Naveed Tahir

Dissertations - ALL

Neural intelligence is identified with complex learning problems optimized over the high-dimensional, non-convex parameter spaces of deep neural networks. Solving such problems generally requires handling competing objectives and conflicting constraints. This is traditionally dealt with using heuristic methods that collapse such complexity into unconstrained, singular objectives. While computationally convenient, this invites a tradeoff against the precision and stability afforded by non-heuristic, geometry-aware approaches. This dissertation explores constrained multi-objective learning in various applied and theoretical contexts and highlights the feasibility of approximate methods as well as the necessity of exact methods. We propose a framework for equality-constrained deep learning via approximate …

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Thermal Aberrations And Optical Design For Current And Future Gravitational Wave Detectors, Matthew Richard Todd Jun 2026

Thermal Aberrations And Optical Design For Current And Future Gravitational Wave Detectors, Matthew Richard Todd

Dissertations - ALL

Since the first detection of gravitational waves in 2015, the LIGO-Virgo-KAGRA collabo- ration has detected over 300 gravitational-wave events. Planned upgrades to each detector will further improve gravitational wave sensitivity limits, pushing the frontier of multi- messenger astronomy and paving the way for next-generation detectors, like Cosmic Ex- plorer and Einstein Telescope. Though many challenges to reach sensitivity goals are being addressed, there are still cru- cial aspects of the detectors that are poorly understood and will inhibit gravitational wave detection commissioners from bringing future detectors to their design sensitivity. In par- ticular, increased circulating arm power targets will exacerbate …

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Peptide And Peptide Bioconjugate Based Drug Development For The Treatment Of Metabolic Diseases, Nancy Cham Jun 2026

Peptide And Peptide Bioconjugate Based Drug Development For The Treatment Of Metabolic Diseases, Nancy Cham

Dissertations - ALL

The Doyle group has coined the term ‘corrination’ to describe the conjugate modification of a peptide, protein, small molecule, or radionuclide with a corrin ring-containing molecule such as cobalamin, also known as vitamin B12 (B12), or cobinamides. By exploiting the innate chemico-physical properties of corrin ring-containing compounds, both in general and specifically via the innate dietary B12 uptake pathway in mammals, corrination has been explored for drug development and targeted/localized delivery of probes and therapeutics. Most recently, it is in the field of peptide-based therapeutics that corrination is generating significant interest, no doubt driven in part by the recent successes …

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Image Restoration Regularized By Structured Sparsity Promoting Functions: Theory, Algorithms, And Applications, Jianchen Wei Jun 2026

Image Restoration Regularized By Structured Sparsity Promoting Functions: Theory, Algorithms, And Applications, Jianchen Wei

Dissertations - ALL

Image restoration aims to recover an unknown clean image from observations degraded by blur, subsampling, missing pixels, or noise. This dissertation develops and analyzes variational image restoration models based on structured sparsity promoting functions (SSPFs) and their Moreau-enveloped regularization. The main objective is to design nonconvex regularization models that promote structured sparsity in transformed image representations while remaining analytically tractable and computationally effective. The first part of the dissertation studies an SSPF regularized image restoration model. Under the identifiability condition $\ker(A)\cap \ker(B)=\{\bm0\}$, where $A$ is a linear forward degradation operator and $B$ is a transform operator used to extract image …

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Examining Nitrate Concentrations In Rainwater In The Marine Boundary Layer In St. Petersburg, Sam Irvine, Anson Kirsch, Ben Lloyd '25, Yasin Elshorbany, James Ivey Jun 2026

Examining Nitrate Concentrations In Rainwater In The Marine Boundary Layer In St. Petersburg, Sam Irvine, Anson Kirsch, Ben Lloyd '25, Yasin Elshorbany, James Ivey

Student Research

Harmful algae blooms (HABs) are a common, natural phenomenon that occur in bodies of water. Karenia brevis is an algae species where, in excess, it can result in red tide events which deplete nutrients in the area, impacting aquatic life and releasing toxic gasses. Past research shows that K. brevis can grow through nutrient absorption in response to excess nitrate in water. This project sought to examine whether nitrates from rainfall are responsible for creating an increase in nitrogen concentrations in the water surrounding St. Petersburg which can lead to algae bloom growth. Results showed that rainwater has higher concentrations …

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Binding Energy Of Muonic Beryllium: Perturbative Versus All-Order Calculations, Shikha Rathi, Ulrich D. Jentschura, Paul Indelicato, Ben Ohayon Jun 2026

Binding Energy Of Muonic Beryllium: Perturbative Versus All-Order Calculations, Shikha Rathi, Ulrich D. Jentschura, Paul Indelicato, Ben Ohayon

Physics Faculty Research & Creative Works

We compute the ground-state binding energy of muonic (Formula presented) (Formula presented) Be in two ways: first, the fully perturbative treatment of the nuclear-size effect often employed in light systems, and second, an approach that accounts for the finite-nuclear-size to all orders (and is inspired by calculations otherwise employed for heavy muonic ions). The results are compared term by term and show that both approaches agree to better than one part-per-million of the total energy. The objective of this work is twofold. The first is practical: to provide a parameterization that allows the extraction of the (Formula presented) (Formula presented) …

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Multi-Modal Survival Prediction On Breast Cancer Mammograms And Enabling Multi-Institutional Collaborations With Federated Learning, Nikolas Koutsoubis Jun 2026

Multi-Modal Survival Prediction On Breast Cancer Mammograms And Enabling Multi-Institutional Collaborations With Federated Learning, Nikolas Koutsoubis

USF Tampa Graduate Theses and Dissertations

Cancer remains one of the leading causes of mortality worldwide, and machine learning is well positioned to leverage the large volumes of routinely collected clinical and imaging data to improve patient outcomes. Realizing this potential at scale requires three capabilities that current practice does not yet deliver in combination: models that integrate the multiple data modalities clinicians use, training procedures that respect institutional data-sharing constraints, and tooling that enables sharing of de-identified data when federated approaches are not sufficient. This dissertation develops methods and infrastructure addressing each of these capabilities in the context of breast cancer and oncology more broadly. …

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Anisotropic Second-Harmonic Generation In Superconducting Nanostructures, Sara Memarzadeh, Maciej Krawczyk, Armen Gulian, Jarosław W. Kłos Jun 2026

Anisotropic Second-Harmonic Generation In Superconducting Nanostructures, Sara Memarzadeh, Maciej Krawczyk, Armen Gulian, Jarosław W. Kłos

Mathematics, Physics, and Computer Science Faculty Articles and Research

Circuits based on superconducting nanostructures are among the most promising platforms for quantum computing. Understanding how device geometry governs nonlinear electrodynamics is crucial for implementing superconducting quantum technologies. However, to date, research has largely been limited to superconducting nanostructures with collinearly aligned static and dynamic applied magnetic fields. Here, we analyze the dynamics of Meissner currents and Abrikosov vortices in a superconducting nanocube exposed to combined static and microwave magnetic fields, extending the analysis to a more general excitation geometry. We demonstrate that, in a noncollinear configuration, the magnetization component parallel to the static field develops a dominant second-harmonic response …

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Molecular Identification Of Cryptococcus Albidus Isolated From A Gingivitis Infection In A Male From Karbala City, Iraq, Maysaa Taqi Al-Khazali, Zahraa Raheem Murshidy, Sarah Kadhim Al-Rahimy, Sura Abd Ali Kadhim Mohammed, Dhuha Ali Hussein Jun 2026

Molecular Identification Of Cryptococcus Albidus Isolated From A Gingivitis Infection In A Male From Karbala City, Iraq, Maysaa Taqi Al-Khazali, Zahraa Raheem Murshidy, Sarah Kadhim Al-Rahimy, Sura Abd Ali Kadhim Mohammed, Dhuha Ali Hussein

Karbala International Journal of Modern Science

The current study presents a case of gingivitis caused by Cryptococcus albidus in a 35-year-old male from the city of Karbala in Iraq. This fungal species was identified via morphology, microscopy, additionally to the VITEK system. C. albidus was further confirmed using the polymerase chain reaction (PCR) technique by amplifying the 18S rRNA gene as a universal primer and sequencing. Sequences analysis revealed that this strain of C. albidus had not been previously documented in the NCBI database. Hence, the newly obtained sequences were submitted to the GenBank repository and assigned the accession number OQ975882.1, marking the first report of …

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Instructions To Authors, Academy Editors Jun 2026

Instructions To Authors, Academy Editors

Journal of the Arkansas Academy of Science

No abstract provided.

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Journal Acknowledgements And Editorial Board, Academy Editors Jun 2026

Journal Acknowledgements And Editorial Board, Academy Editors

Journal of the Arkansas Academy of Science

No abstract provided.

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Keynote Address And Meeting Program, Academy Editors Jun 2026

Keynote Address And Meeting Program, Academy Editors

Journal of the Arkansas Academy of Science

No abstract provided.

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Business Meeting Report (Secretary's And Treasurer's Report), Academy Editors Jun 2026

Business Meeting Report (Secretary's And Treasurer's Report), Academy Editors

Journal of the Arkansas Academy of Science

No abstract provided.

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Artificial Food Colors Are Not Needed To Attract Ruby-Throated Hummingbirds (Archilochus Colubris) To Feeders, A. Siddiqui, R. Kannan Jun 2026

Artificial Food Colors Are Not Needed To Attract Ruby-Throated Hummingbirds (Archilochus Colubris) To Feeders, A. Siddiqui, R. Kannan

Journal of the Arkansas Academy of Science

No abstract provided.

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Noteworthy Natural History Notes From The Neotropics, R. Kannan Jun 2026

Noteworthy Natural History Notes From The Neotropics, R. Kannan

Journal of the Arkansas Academy of Science

I report some rarely observed, infrequently reported, or hitherto unrecorded ecological interactions from the neotropics. These anecdotal observations were made opportunistically during nature tours or tropical biology classes in Belize, Panama, Costa Rica, and Trinidad & Tobago, between 2014 and 2024.

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Sperm Morphology In The Eastern Narrow-Mouthed Frog, Gastrophryne Carolinensis (Anura: Microhylidae), S. E. Trauth Jun 2026

Sperm Morphology In The Eastern Narrow-Mouthed Frog, Gastrophryne Carolinensis (Anura: Microhylidae), S. E. Trauth

Journal of the Arkansas Academy of Science

Studies by Scheltinga et al. (2002) and Scheltinga and Jamieson (2003) provide the most comprehensive analysis and only review of sperm morphology in Narrow-Mouthed Frogs (family Microhylidae). Of the 490+ species known to occur in this anuran family (Vitt and Caldwell 2014), only 3 are distributed in the United States (Powell et al. 2016), and 2 of these occur in Arkansas (Trauth et al. 2004). Surprisingly, sperm studies on only 12 microhylid species have been conducted (Scheltinga and Jamieson 2003), and no sperm studies are available on any North American species.

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A Review Of Herpetofaunal Distributions In Arkansas With Special Emphasis On Contributions From Citizen Science: Part Ii – Turtles, Lizards, And Alligators, L. Hobbs, E. Kelley, J. Jackson, J.D. Willson, K. G. Roberts, R. Kannan Jun 2026

A Review Of Herpetofaunal Distributions In Arkansas With Special Emphasis On Contributions From Citizen Science: Part Ii – Turtles, Lizards, And Alligators, L. Hobbs, E. Kelley, J. Jackson, J.D. Willson, K. G. Roberts, R. Kannan

Journal of the Arkansas Academy of Science

We update and present a comprehensive review of the distributions of the species of lizards (14), alligators (1), and turtles (16) in Arkansas. We compare historical and current distributions with citizen science data uploaded and verified in iNaturalist, a leading online citizen science biodiversity monitoring database. The Arkansas Herpetological Atlas, an online resource maintaining species occurrence records, is also used and compared. We highlight the role played by iNaturalist in enhancing our knowledge of the distributions of these species in Arkansas. As of 13 February 2025, verified and vetted Research Grade (RG) iNaturalist observations from Arkansas include 7,462 observations of …

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History And Distribution Of The Dark Ibises (Glossy Ibis Plegadis Falcinellus And White-Faced Ibis P. Chihi) In Arkansas, R. Tumlison, P. D. Rodriguez Jun 2026

History And Distribution Of The Dark Ibises (Glossy Ibis Plegadis Falcinellus And White-Faced Ibis P. Chihi) In Arkansas, R. Tumlison, P. D. Rodriguez

Journal of the Arkansas Academy of Science

The Glossy Ibis (Plegadis falcinellus) and White-faced Ibis (P. chihi) sometimes are reported simply as Dark Ibises due to difficulty in identifying them when mature characters are not clearly visible. We evaluated reports verified on citizen science websites to examine the origins and distributions of these migratory species in Arkansas. The Glossy Ibis was first documented in Arkansas in 1956, has been reported in 21 of our 75 counties, and is found more commonly in eastern Arkansas. The White-faced Ibis was first reported in Arkansas in 1971, has been reported in 41 of our 75 counties, …

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History And Distribution Of Great-Tailed Grackles (Quiscalus Mexicanus) In Arkansas, R. Tumlison, V. Andersen Jun 2026

History And Distribution Of Great-Tailed Grackles (Quiscalus Mexicanus) In Arkansas, R. Tumlison, V. Andersen

Journal of the Arkansas Academy of Science

Great-tailed Grackles (Quiscalus mexicanus) were reported first in southwestern Arkansas in 1969, were nesting there in 1977, and established a resident population by 1980. Nesting was reported in far northwestern Arkansas in 1986. Presently, the species is known from 44 of Arkansas’s 75 counties, those mostly in the western and central counties. Most individuals appear to be migratory, with most reports occurring in April and May. However, breeding and now resident populations have been reported in the southwestern, northwestern, and central counties, particularly in urban areas. Birds are very commonly reported to forage at fast-food establishments and truck …

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Multiple Nuclear Configurations And Microtubular Arrangements In Spermatozoa Of The Western Siren, Siren Nettingi (Caudata: Sirenidae), S. E. Trauth Jun 2026

Multiple Nuclear Configurations And Microtubular Arrangements In Spermatozoa Of The Western Siren, Siren Nettingi (Caudata: Sirenidae), S. E. Trauth

Journal of the Arkansas Academy of Science

I examined the ultrastructure of spermatozoa of the Western Siren, Siren nettingi, using transmission electron microscopy. My primary objective in this study was to elucidate, for the first time, the unique morphological complexity of biflagellated sperm in this species. This study also represents my fifth addition in a series of investigations that highlight the novel nature of all aspects of spermatogenesis in this salamander I show the basic sperm transverse and sagittal design which includes a nucleus, 2 axial fibers supporting 2 undulating membranes which have 2 axonemes residing at their terminal ends, several circular mitochondria, and several electron-dense masses. …

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Binucleation And Seasonal Cycle Of Sertoli Cells In The Western Lesser Siren, Siren Nettingi (Caudata: Sirenidae), S. E. Trauth Jun 2026

Binucleation And Seasonal Cycle Of Sertoli Cells In The Western Lesser Siren, Siren Nettingi (Caudata: Sirenidae), S. E. Trauth

Journal of the Arkansas Academy of Science

I examined binucleation and the seasonal cycle of Sertoli cells in the Western Siren (Siren nettingi) using light microscopy and transmission electron microscopy. My primary objective in this study was to report, for the first time, the presence of double nuclei in Sertoli cells in a salamander. This study also represents the sixth contribution in a series of investigations that highlight the novel nature of all aspects of spermatogenesis in this unique salamander. My findings add to a growing list of extraordinary morphological and reproductive features that distinguish this salamander from all other vertebrates.

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Distal Urogenital Anatomy And Epithelial Morphology In The Male Eastern Narrow-Mouthed Frog, Gastrophryne Carolinensis (Anura: Microhylidae), S. E. Trauth Jun 2026

Distal Urogenital Anatomy And Epithelial Morphology In The Male Eastern Narrow-Mouthed Frog, Gastrophryne Carolinensis (Anura: Microhylidae), S. E. Trauth

Journal of the Arkansas Academy of Science

I investigated the microanatomy of the distal urogenital system in male Eastern Narrow-Mouthed Frogs (Gastrophryne carolinensis) from a small sample (n = 5) collected in central Arkansas in April, May, and July (2021) and May 2022. Specifically, my primary goals were to elucidate the histology of the following: (1) the paired Wolffian (urogenital) ducts caudally from the kidneys to their merging with the urodeum of the cloaca, (2) the structure of seminal vesicles, and (3) the epithelial morphologies among the distal urogenital tract, the posterior alimentary canal, and the cloaca. My histological analysis confirmed the presence of …

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Academy Presidents And Institutional Members, Academy Editors Jun 2026

Academy Presidents And Institutional Members, Academy Editors

Journal of the Arkansas Academy of Science

No abstract provided.

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Table Of Contents, Academy Editors Jun 2026

Table Of Contents, Academy Editors

Journal of the Arkansas Academy of Science

No abstract provided.

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