Physical Sciences and Mathematics Commons^™

Human Serum Albumin Interaction With Organochlorine Pesticides, D. S. Sanford, R. Yadav, A. Mishra

Journal of the Arkansas Academy of Science

Human serum albumin (HSA) is the most abundant blood plasma protein and plays a crucial role in drug transport and physiological homeostasis. HSA has a highly flexible structure consisting of three domains, each with multiple binding sites lined with hydrophobic and hydrophilic residues. The structural properties of HSA make it a robust reservoir and receptor for various endogenous and exogenous compounds, including therapeutic drugs. Organochlorine pesticides (OCPs) are a subclass of pesticides characterized by their chlorine content. Once widely used, these compounds remain persistent in the environment and biological systems despite regulatory restrictions in many developed countries. The strong ligand-binding …

Comparison Of Machine Learning Models For Colon Cancer Survival: Predictive Modeling Approach, Reuben Adatorwovor, Motolani E. Ogunsanya, Bin Huang, Richard Charnigo, Olufunmilola Abraham

Biostatistics Faculty Publications

Background: Colon cancer is a leading cause of cancer-related deaths worldwide, with survival influenced by risk factors, treatment type, and patient characteristics. Traditional statistical models, such as Kaplan-Meier curves, have been widely used to estimate survival probabilities. However, these models often have difficulty handling complex interactions, covariates, and nonlinear relationships between risk factors. Recently, machine learning (ML) techniques have emerged as promising tools for improving survival prediction by handling large covariates and capturing complex patterns.

Objective: This study compares several ML models to accurately estimate colon cancer survival by leveraging data from the Kentucky Cancer Registry. By identifying key risk …

Disentangling The Inverse Relationship Between Cancer And Alzheimer’S Or Parkinson’S Disease: A Systematic Review On Mendelian Randomization Studies, Khine Zin Aung, Su Su Zin, Xian Wu, Zin W. Myint, Shama D. Karanth, Steven Estus, Christopher M. Norris, Peter T. Nelson, David W. Fardo, Erin L. Abner, Yuriko Katsumata

Biostatistics Faculty Publications

Introduction

Although studies have reported an inverse relationship between cancer and neurodegenerative diseases such as Alzheimer's disease (AD) and Parkinson's disease (PD), findings remain inconsistent. Observational studies are limited by survival bias and reverse causation. To better understand the relationship, we conducted a systematic review of Mendelian randomization (MR) studies examining both directions—assessing cancer as a risk factor for AD or PD, as well as AD or PD as exposures influencing cancer risk.

Methods

We systematically reviewed MR studies investigating the causal relation between cancer and either AD or PD. Cancer could be specified as either an exposure or an …

Incident Atherosclerotic Cardiovascular Disease Among Veterans By Gender Identity: A Cohort Study, Carl G. Streed Jr., Meredith S. Duncan, Kory R. Heier, T. Elizabeth Workman, Lauren B. Beach, Guneet K. Jasuja, Hill L. Wolfe, Landon D. Hughes, John R. O’Leary, Melissa Skanderson, Joseph L. Goulet

Biostatistics Faculty Publications

Background: Transgender and gender diverse (trans) populations are at elevated risk for atherosclerotic cardiovascular disease (ASCVD).

Objective: Measure the association of gender identity and gender-affirming hormone therapy (GAHT) with ASCVD outcomes.

Design: Cohort study.

Participants: Over 1 million veterans receiving care in the Veterans Health Administration.

Main Measures: Gender identity was identified via a validated natural language processing (NLP) algorithm. Incident ASCVD (acute myocardial infarction, ischemic stroke, or revascularization after the baseline date) was identified via International Classification of Diseases diagnosis codes among veterans without prevalent ASCVD. We calculated sample statistics stratified by gender identity and used Cox proportional hazard …

The Lotus At Dawn: Rethinking Climate Resilience In An Archipelago, Marie Franchesca M. Borras

English Faculty Publications

Super Typhoon Rai, locally called Odette, hit the Philippines on December 16, 2021, devastating General Luna, a municipality in Surigao del Norte. Due to this natural disaster, this study—originally written as a pre-pandemic autoethnographic account via flâneuserie—endeavors to understand how the mobility of city dwellers contributes to the anthropogenic climate by exploring the ethics of care. Additionally, it seeks to posit inquiries on what it means to be climate-resilient in an archipelagic country such as the Philippines. Beyond economic methodologies, it is pivotal to examine issues of care that deal with our relationship with nature by understanding how, for example, …

Evaluating The Evaluators: The Role Of Benchmarks In Legal Ai, Jonathan A. Franklin, Sean Harrington, Christine Hye Won Park

Other Faculty Publications

No abstract provided.

Modeling Recreational Risk Factors On The Landscape: A Predictive Gis Analysis Of Recreation Accident Response Near North Bend, Washington., Naomi S.J. Van Roon

All Master's Theses

Search and Rescue (SAR) teams in Washington respond to approximately 900 incidents annually, many stemming from outdoor recreation near Interstate 90 surrounding North Bend. This study utilized predictive GIS analysis to identify areas of concern within state lands, including Mount Si and Middle Fork Snoqualmie Natural Resource Conservation Areas, Raging River State Forest, and Rattlesnake Mountain Scenic Area. The predictive model was calibrated using SAR responses to hiking-related incidents between March and November from 2020 to 2023, and incorporated an analysis of risk factors influencing recreationalist incident probability. This research then developed a decision support system to aid land managers …

Teaching Agroecology Through Play: A Board Game On Companion Planting Using Agroecological Principles, Ashmita Das, Julie Capito-Hernandez, Estelí Jiménez-Soto

School of Geosciences Faculty and Staff Publications

Board games themed around environmental topics are promising tools for promoting awareness of complex sustainability issues, as the materiality, sociality, and multidimensionality of gameplay can help overcome some of the inherent limitations of more traditional learning formats. To explore the potential relevance of board games for communicating about agrifood system topics in particular, we designed and tested a game called Companion: An Agroecological Adventure, in which players take on the role of community gardeners who must apply both social and ecological principles of agroecology to cultivate a thriving garden plot. In this paper, we present the results of a study …

Food Sovereignty Among Migrant Farmworkers: The Role Of Agrobiodiversity For Autonomy And Resistance In A Mexican Coffee Plantation, Estelí Jiménez-Soto, Sanya Cowal, April Lopez

School of Geosciences Faculty and Staff Publications

Coffee agroecosystems represent the economic base for thousands of small growers and agricultural workers, as well as a significant proportion of many regional economies in Latin America. Every year, the production of coffee in this region attracts a great number of laborers and their families, particularly during the harvest season. Despite being essential workers in the food system, agricultural workers continue to be one of the most marginalized actors in the coffee production chain. Even with an environment of precarity, agricultural workers exercise their autonomy and food sovereignty—the process by which agricultural workers, in this case, define their food system …

Match Accuracy Of Burned Teeth: A Pilot Study Of Allied Dental Professionals, Brenda T. Bradshaw, Marsha A. Voelker, Samantha C. Vest, Sinjini Sikdar

Dental Hygiene Faculty Publications

Purpose: The purpose of this pilot study was to assess allied dental professionals' match accuracy of burned teeth; a skill required by disaster victim identification (DVI) team members.

Methods: This cross-sectional study used a convenience sample of registered dental hygienists (RDH) (n=15) and dental assistants (DA) (n=15) to assess their match accuracy of burned teeth with simulated antemortem (AM) and postmortem (PM) images. Fifteen human teeth were heated at 400°C for 15 minutes. Prior to and following heat alteration, each tooth was photographed and radiographed. Images were presented to participants in randomized order, and they were instructed to correctly match …

Estimating The Carbon Footprint Of Sheep Production In Western Australia, Tafesse Estifanos, Christophe D'Abbadie, Johnny Machon, Amir Abadi Abadi Ghadim, Gus Manatsa, Paul Mattingley, Ross Kingwell, Kevin Foster

Farm Systems and Economics published reports

Western Australia’s broadacre mixed farming systems combine cropping and sheep production and are the largest component of the state’s agricultural sector. The south west Western Australia (WA) agricultural area hosts about 98% of the state's sheep flock. The sheep industry contributed $1.5 billion to the state’s economy in 2021-22 and accounts for about a quarter of on-farm greenhouse gas (GHG) emissions. Most sheep industry emissions (over 80%) come from methane produced by the sheep. Despite this environmental impact, only 9.9% of Australian sheep producers have estimated their emissions, which limits the industry's ability to monitor and manage carbon footprints effectively. …

Stream Response To A Dam Removal: Mill Creek, Davenport, Ca, Jessica J. Williamson

Master's Theses

Dams have many effects on stream morphology and ecology, including a loss of sediment supply downstream, reduced access to the entire stream for aquatic fauna, and a flooded area upstream of the dam. Dams are a hurdle for migrating organisms such as anadromous fish, which is a group of concern. An over 100-year-old dam on Mill Creek, a stream draining a coastal watershed in central California, was removed in the fall of 2021. The site is in the Santa Cruz Mountains, where endangered salmonids such as steelhead, Oncorhynchus mykiss, have historically lived. To study the change in the stream from …

Implementation Of Project-Based Instruction In Statistics Higher Education Courses, Jennifer A. Daddysman

Theses and Dissertations--Education Sciences

Project-based instruction is an instructional methodology based in constructivism that aligns with recommendations from the American Statistical Association for teaching statistics, including incorporating real-world data and examples, collaboration, and scaffolding (GAISE College Report ASA Revision Committee, 2016; GAISE Steering Committee, 2024; Krajcik & Blumenfeld, 2005; Tishkovskaya & Lancaster, 2012). This study examined current use of project-based instruction in United States higher education courses in statistics and the supports for and challenges to implementing this type of instruction.

This study used qualitative research methodology in the integrative pedagogy and diffusion of innovation frameworks. Voluntary response surveys were distributed via two sections …

Consumption Pressure In Estuaries Peaks At Intermediate Salinities, Catherine E. De Rivera, Amy A. Larson, Benjamin G. Rubinoff, Luna R. Soto, Seth L. Wright, Edwin D. Grosholz, Gregory M. Ruiz, Andrew L. Chang

Environmental Science and Management Faculty Publications and Presentations

The nature and strength of biotic interactions change along stress gradients, but the importance of these interactions across estuarine gradients is under studied. Here, we examined how consumption varies across estuarine salinity gradients by deploying standardized baits (‘squidpops’) to measure consumption pressure along the gradients of five estuaries in Oregon, USA. The relationship between consumption and stress was nonlinear: consumption pressure peaked slightly at mid salinity and decreased at low salinity, especially as temperature increased, in the five estuaries studied. This finding does not support either of two existing models for consumption across gradients, including the Consumer Stress Model and …

Fueling Adaptation: Collaborative Wildfire Governance In The Colorado Front Range Landscape, Mahmood Muttaqee, Cody Evers, Lindsay K. Campbell, Max Nielsen-Pincus, Olivia Awbrey, Kathryn Hixson, Michelle Johnson, Erika Svendsen

Environmental Science and Management Faculty Publications and Presentations

Collaborative governance plays a critical role in wildfire risk mitigation efforts. This study examines collaborative wildfire governance networks within the Colorado Front Range, a landscape that was designated under the USDA Forest Service's Wildfire Crisis Strategy (WCS). Collaborative governance networks in the Colorado Front Range leverage partnerships across multiple organizational actors including federal, state, and local agencies, non-profits, fire districts, and research institutions. Through survey data collected from 281 respondents revealing a collaborative network of 401 organizations, the study aimed to identify the structure, capacity, and gaps in governance networks addressing wildfire risk in the Colorado Front Range. Survey results …

Urban Heterogeneity Drives Dissolved Organic Matter Sources, Transport, And Transformation From Local To Macro Scales, Rebecca L. Hale, Kristina G. Hopkins, Krista A. Capps, John S. Kominoski, Jennifer L. Morse, Allison H. Roy, Shuo Chen, Annika Quick, Andrew J. Blinn, Liz Ortiz Muñoz, Gwendolynn Folk

Environmental Science and Management Faculty Publications and Presentations

Urbanization reshapes dissolved organic matter (DOM) sources, transport, and transformations through changes in vegetation, hydrology, and management of waste and water. Yet the impacts of urbanization on DOM are variable within and among cities. Predicting heterogeneous responses to urbanization is challenged by diverse human activities and underlying biophysical variation along stream networks. Using data from the 486 largest urban areas in the continental United States and seven focal cities, we identified macro and local scale urban gradients in social, built, and biophysical factors that are expected to shape DOM. We used these gradients and the literature to develop hypotheses about …

Citizen’S Rare Plant Watch, Nora Dunkirk, Gabriel Campbell, Kris Freitag

Rae Selling Berry Seed Bank and Plant Conservation Program

Rare species data for plants is lacking, hindering land management decisions and conservation outcomes. With Citizen's Rare Plant Watch, we empower citizen scientists to provide the “eyes on the ground” and collect data needed for conservation decision making in Oregon.

Aquatic Invasive Species Survey And Treatment On Lake Umatilla And Lake Celilo 2023-2024 Report, Garbiel E. Campbell, Jacob Rose

Center for Lakes and Reservoirs Publications and Presentations

Flowering Rush (Butomus umbellatus) is an invasive aquatic plant in the Pacific Northwest that threatens salmon habitat. The Center for Lakes and Reservoirs staff surveyed for this and other aquatic species from 2023 and 2024 in the Columbia River in Lake Umatilla and Lake Celilo. This document summarizes their survey efforts including their protocols, data, and small-scale removal efforts.

Heuristic Approaches For Coordination Of Heterogeneous Robotic Systems In Harvesting Automation With Size Constraints, Hyeseon Lee

Dissertations, Master's Theses and Master's Reports

This thesis presents the development of path planning algorithms for the coordination of heterogeneous robotic systems while considering size constraints. The objective is to generate practical and efficient solutions for real-world applications. The use of heterogeneous collaborative robots is beneficial in many applications, such as transportation operations in warehouses or manufacturing environments, surveillance, and monitoring, and task allocation and path planning are critical techniques that need to be addressed to deploy in real-world applications. This research focuses on automating lavender harvesting, where robots with varying capabilities must collaboratively navigate complex field layouts to efficiently complete harvesting tasks.

The problem considers …

Environmental And Silvicultural Factors Associated With Northern White-Cedar (Thuja Occidentalis) Seedling Regeneration In Harvested Lowlands, Victoria J. Hunter

Dissertations, Master's Theses and Master's Reports

Northern white-cedar (Thuja occidentalis) plays a vital ecological and cultural role in North America's eastern hemi-boreal forests, yet its regeneration is often sparse and difficult to manage, especially in lowland conditions. To assess factors influencing cedar seedling densities, we surveyed 430 plots across 135 harvested cedar-dominated lowland stands (1–72 years post-harvest) over a broad geographic region. Most plots (73%) harvested in the last century and 90% of those harvested in the last decade had absent or understocked cedar seedling densities (0–5000/ha). Seedling density increased with time-since-harvesting, density of retained overstory cedar trees, denser canopy closure, and decreased with …

Interactions And Applications Of Optical Angular Momentum In Magneto-Optical Material, Seth R. Nelson

Dissertations, Master's Theses and Master's Reports

This dissertation explores the interactions and applications of optical angular momentum within magneto-optical materials. Beginning with a theoretical and experimental analysis of multiple reflection and refraction phenomena within magneto-optical material. We derive and verify the dependence of refractive indices on optical spin angular momentum and magneto-optical magnetization, resulting in nonreciprocal elliptical and linear polarization beam splitting effects and wavevector discretization. We fabricate a magnetless slab waveguide isolator with minimal optical loss. Extending our study to optical orbital angular momentum, we introduce a perturbation to the electronic transition model in bismuth-substituted iron garnets. We demonstrate that this perturbation leads to nonreciprocal …

Big Tracks, Little Tracks: Following Animal Prints (1999) By Millicent E. Selsam, Maughn Rollins Gregory

Picture Books

Coming up with the most reasonable explanation of the available clues is something we all do on a daily basis. This book describes animal tracks as clues from which children can make inferences about what kind of animal left them and what they were doing when they did.

Depth Of The Lake And The Height Of The Sky (2017) By Kim Jihyun, Megan Jane Laverty

Picture Books

The Depth of the Lake and the Height of the Sky (2017) is KimJihyun’s first picture book; it is composed entirely of pictures. It “tells” the story of a young boy and his dog who spend a day swimming and sunbathing at a lake that is within walking distance from his grandparents' home, whom he is visiting with his parents. At first glance, the story might seem unremarkable, recounting an experience familiar to many. However, Kim’s illustrations challenge this assumption by drawing us into the boy’s encounter with nature. She creates a visual journey that guides us through a perceptual …

Foreign Object Detection System Development Using Edge Devices Integrated With Quadcopter Autonomous Tracking, Chi-Chia Huang, Ching-Hung Lee

Journal of Marine Science and Technology–Taiwan

This study proposes an all-weather autonomous foreign-object detection system capable of operating in low-light environments. We used a highly mobile quadcopter equipped with an edge-computing device as the inspection platform. On the software side, we integrated a low-light image enhancement model, a path-tracking algorithm, and a foreign object detection model to achieve rapid object detection. A lightweight, low-light image-enhancement model reduces the need for additional lighting equipment, thereby enabling reliable detection under low-light conditions. The path-tracking algorithm integrates a lightweight semantic segmentation model with traditional image-processing techniques to establish flight paths efficiently and reliably. The foreign-object detection component employs state-of-the-art …

Optimization Of Underactuated Ship Sliding Mode Controller Based On The Ddpg Algorithm, Lin Ma, Mingzhe Qi, Shicai Chen, Hongwei Bian, Jian Zhang

Journal of Marine Science and Technology–Taiwan

Due to the development of ship intelligence, the demand for precise controllers is increasing day by day. In traditional design, the trial-and-error method often leads to the use of inaccurate controller parameters, causing oscillations when environmental disturbances are present. To address these issues, this study introduces deep learning to optimize the controller parameters, particularly those used for sliding mode controllers in underactuated ships. We adopt the Deep Deterministic Policy Gradient (DDPG) algorithm based on the Actor Critic framework. By freely setting the reward function to match the control objective, the trained model can output more accurate controller parameters, with the …

Experiments On Aluminum Alloy Additive Layer Waam Lamination Using The Arc Current Reduction Technique, Jukkapun Greebmalai, Eakkachai Warinsiriruk, Chao-Hsiang Hsiao, Yin-Tien Wang

Journal of Marine Science and Technology–Taiwan

Recent advancements in additive manufacturing have been propelled by innovations in processes, materials, and fabrication techniques. This study specifically focuses on the optimizing Wire and Arc Additive Manufacturing (WAAM) within the Gas Metal Arc Welding (GMAW) process. The goal is to build laminated layers using aluminum alloy from the five-thousand series. In this research, a novel technique is introduced that employs a reduced arc-current during the additive layer progress for aluminum alloys, along with a double pulse current in the GMAW process to enhance weldability. The material used for addition is ER5356 aluminum wire, which is applied to an Al-5083 …

An Optimization Model For Supporting Bunkering Decisions In Bulk Shipping, Chung-Cheng Lu, Hui-Chieh Li, Hung-Yu Chen

Journal of Marine Science and Technology–Taiwan

This study addresses a bunkering optimization problem for bulk shipping carriers that explores route deviation to find optimal bunkering locations and amounts. A mixed integer linear programming (MILP) model is developed to determine optimal bunkering decisions that minimize total operating costs, including total daily operating costs, bunkering costs, port charges and surcharges, while observing time window constraints at loading/unloading ports. The proposed model is evaluated using instances generated from real data provided by H company with its operational headquarters in Taipei, Taiwan, which operates a fleet of handysize ships in East and South Asia. The results indicate that optimization models …

Assessment Of Coastal Navigation Safety: A Case Study Of Boka Bay With Stakeholder Perspectives, Ivan Mraković, Rino Bošnjak

Journal of Marine Science and Technology–Taiwan

The navigational safety of Boka Bay, i.e., a critical maritime area along the Adriatic coast, is of great importance owing to its ecological sensitivity, diverse marine traffic, and significant economic activity. This study provides a comprehensive assessment by analyzing the perspectives of various stakeholders, including seafarers, local pilots, skippers, regulatory authorities, and others engaged in maritime activities within the bay. Using a structured questionnaire survey, both quantitative and qualitative data were collected in formats such as descriptive responses, Yes/No choices, and Likert scale ratings, ensuring a well-rounded understanding of navigational practices and challenges. The data were analyzed using descriptive statistics, …

A Hybrid Model To Assess Commercial Port Resilience In Taiwan, Po-Hsing Tseng, James J.H. Liou

Journal of Marine Science and Technology–Taiwan

Since 2021, international commercial ports have faced unprecedented challenges (e.g., COVID-19 pandemic, Suez Canal congestion), impacting daily life, work, human well-being, properties, the environment, and socio-economic activities. The adaptation capability resilience of international commercial ports to respond to external changes has become crucial. This study develops an expert knowledge-based hybrid multi-criteria decision-making model integrating Best-Worst Method (BWM), Rough Dombi Aggregator, and Combined Compromise Solution (CoCoSo) to evaluate port resilience capabilities, using Taiwan's international commercial ports as a case study. We propose four evaluation dimensions encompassing 13 indicators: detection capability, resistance capability, resource integration capability, and recovery capability. The BWM determined …

An Evaluation Of The Possibility And Effectiveness Of Renewable Energy In Container Terminal At Jinhae New Port, Min-Seop Sim, Yul-Seong Kim, Chang-Hee Lee

Journal of Marine Science and Technology–Taiwan

The international goals of combating climate change and reducing greenhouse gas emissions are driving container terminal operators to adopt renewable energy solutions. This study evaluated the feasibility and effectiveness of introducing renewable energy and eco-fuels for energy independence at the Jinhae New Port Container Terminal, South Korea. Using portfolio analysis, eight renewable energy technologies (solar power, solar thermal energy, wind energy, hydropower, marine energy, geothermal energy, bioenergy, and waste-to-energy) and seven eco-friendly fuels (electricity, liquefied natural gas, liquefied petroleum gas, hydrogen fuel cells, ammonia fuel cells, bioenergy, and hybrid systems) were assessed. Survey data from stakeholders identified solar, wind, and …