Physical Sciences and Mathematics Commons^™

Metabolic Profiling Of Genetically Modified Potato Periderm Tissues, Liqing Jin

Dissertations, Theses, and Capstone Projects

Potato tubers are protected from dehydration and pathogens by a covering peel (periderm) impregnated with suberin, a complex cross-linked biopolymer that contains both polyaliphatic and lignin-like aromatic domains. Current models describing the macromolecular structure of suberin assume that ferulic acid cross-links both domains as it may form carboxyl ester bonds with aliphatic monomers and non-ester radical-coupled bonds with phenolics. Ferulic acid also links by ester bonds to glycans and acts in cross-linking polysaccharides and lignin. Fatty alcohol/ω-hydroxyacid hydroxycinnamoyl transferase (FHT) is a BADH acyltransferase responsible for the synthesis of akyl-ferulates that is necessary for suberin biosynthesis. Periderm from FHT-RNAi …

Fundamental Parameters Of The Lowest Mass Stars To The Highest Mass Planets, Joseph C. Filippazzo

Dissertations, Theses, and Capstone Projects

The physical and atmospheric properties of ultracool dwarfs are deeply entangled due to the degenerate effects of mass, age, metallicity, clouds and dust, activity, rotation, and possibly formation mechanism on their observed properties. Accurate fundamental parameters for a wide range of substellar objects are crucial to testing stellar and planetary formation theories. To determine these quantities, we construct flux-calibrated spectral energy distributions (SEDs) for 234 M, L, T, and Y dwarfs and calculate bolometric luminosity (L_bol), effective temperature (T_eff), mass, surface gravity, radius, spectral indexes, synthetic photometry, and bolometric corrections (BCs) for each object. We use …

Estimation Of P(X > Y) When X And Y Are Dependent Random Variables Using Different Bivariate Sampling Schemes, Hani M. Samawi, Amal Helu, Haresh Rochani, Jingjing Yin, Daniel Linder

Biostatistics: Faculty Publications

The stress-strength models have been intensively investigated in the literature in regards of estimating the reliability θ = P (X > Y) using parametric and nonparametric approaches under different sampling schemes when X and Y are independent random variables. In this paper, we consider the problem of estimating θ when (X, Y) are dependent random variables with a bivariate underlying distribution. The empirical and kernel estimates of θ = P (X > Y), based on bivariate ranked set sampling (BVRSS) are considered, when (X, Y) are paired dependent continuous random variables. The estimators obtained are compared to their counterpart, bivariate simple random …

Table Of Contents

Journal of Digital Forensics, Security and Law

No abstract provided.

Special Issue On Cyberharassment Investigation: Advances And Trends, Joanne Bryce, Virginia N. L. Franqueira, Andrew Marrington

Journal of Digital Forensics, Security and Law

Empirical and anecdotal evidence indicates that cyberharassment is more prevalent as the use of social media becomes increasingly widespread, making geography and physical proximity irrelevant. Cyberharassment can take different forms (e.g., cyberbullying, cyberstalking, cybertrolling), and be motivated by the objectives of inflicting distress, exercising control, impersonation, and defamation. Little is currently known about the modus operandi of offenders and their psychological characteristics. Investigation of these behaviours is particularly challenging because it involves digital evidence distributed across the devices of both alleged offenders and victims, as well as online service providers, sometimes over an extended period of time. This special issue …

Masthead

Journal of Digital Forensics, Security and Law

No abstract provided.

Differentiating Cyberbullies And Internet Trolls By Personality Characteristics And Self-Esteem, Lauren A. Zezulka, Kathryn C. Seigfried-Spellar

Journal of Digital Forensics, Security and Law

Cyberbullying and internet trolling are both forms of online aggression or cyberharassment; however, research has yet to assess the prevalence of these behaviors in relationship to one another. In addition, the current study was the first to investigate whether individual differences and self-esteem discerned between self-reported cyberbullies and/or internet trolls (i.e., Never engaged in either, Cyberbully-only, Troll-only, Both Cyberbully and Troll). Of 308 respondents solicited from Mechanical Turk, 70 engaged in cyberbullying behaviors, 20 engaged in only trolling behaviors, 129 self-reported both behaviors, and 89 self-reported neither behavior. Results yielded low self-esteem, low conscientiousness, and low internal moral values for …

Back Matter

Journal of Digital Forensics, Security and Law

No abstract provided.

Front Matter

Journal of Digital Forensics, Security and Law

No abstract provided.

Toward Online Linguistic Surveillance Of Threatening Messages, Brian H. Spitzberg, Jean Mark Gawron

Journal of Digital Forensics, Security and Law

Threats are communicative acts, but it is not always obvious what they communicate or when they communicate imminent credible and serious risk. This paper proposes a research- and theory-based set of over 20 potential linguistic risk indicators that may discriminate credible from non-credible threats within online threat message corpora. Two prongs are proposed: (1) Using expert and layperson ratings to validate subjective scales in relation to annotated known risk messages, and (2) Using the resulting annotated corpora for automated machine learning with computational linguistic analyses to classify non-threats, false threats, and credible threats. Rating scales are proposed, existing threat corpora …

Control Of Spontanous Emission From Quantum Emitters Using Hyperbolic Metamaterial Substrates, Tal Galfsky

Dissertations, Theses, and Capstone Projects

Hyperbolic metamaterials (HMMs) are so named for possessing a hyperboloid-shaped dispersion which gives rise to a large photonic density of states. Quantum emitters placed inside or in the near-field of a HMM have been shown to exhibit strong enhancement of spontaneous emission due to the increase in available states. This thesis focuses on enhancing spontaneous emission of quantum emitters in optical frequencies by utilizing multilayered metal/dielectric composites that form these highly anisotropic metamaterials. In conjunction with the enhanced decay rate we experimentally demonstrate two methods for shaping and directing radiation trapped in the HMM into free space by employing a …

Status Of Scientific Knowledge, Recovery Progress, And Future Research Directions For The Gulf Sturgeon, Acipenser Oxyrinchus Desotoi Vladykov, 1955, K.J. Sulak, F. Parauka, W. T. Slack, R. T. Ruth, M. T. Randall, K. Luke, M. E. Price

United States Geological Survey: Staff Publications

The Gulf Sturgeon, Acipenser oxyrinchus desotoi, is an anadromous species of Acipenseridae and native to North America. It currently inhabits and spawns in the upper reaches of seven natal rivers along the northern coast of the Gulf of Mexico from the Suwannee River, Florida, to the Pearl River, Louisiana, during spring to autumn. Next to the Alligator Gar (Atractosteus spatula), the Gulf Sturgeon is currently the largest fish species occurring in U.S. Gulf Coast rivers, attaining a length of 2.35 m and weights exceeding 135 kg, but historically attained a substantially larger size. Historically, the spawning populations existed in additional …

On The Derivative Of 2-Holonomy For A Non-Abelian Gerbe, Cheyne J. Miller

Dissertations, Theses, and Capstone Projects

The local 2-holonomy for a non abelian gerbe with connection is first studied via a local zig-zag Hochschild complex. Next, by locally integrating the cocycle data for our gerbe with connection, and then glueing this data together, an explicit definition is offered for a global version of 2-holonomy. After showing this definition satisfies the desired properties for 2-holonomy, its derivative is calculated whereby the only interior information added is the integration of the 3-curvature. Finally, for the case when the surface being mapped into the manifold is a sphere, the derivative of 2-holonomy is extended to an equivariant closed form …

Computerized Classification Of Surface Spikes In Three-Dimensional Electron Microscopic Reconstructions Of Viruses, Younes Benkarroum

Dissertations, Theses, and Capstone Projects

The purpose of this research is to develop computer techniques for improved three-dimensional (3D) reconstruction of viruses from electron microscopic images of them and for the subsequent improved classification of the surface spikes in the resulting reconstruction. The broader impact of such work is the following.

Influenza is an infectious disease caused by rapidly-changing viruses that appear seasonally in the human population. New strains of influenza viruses appear every year, with the potential to cause a serious global pandemic. Two kinds of spikes – hemagglutinin (HA) and neuraminidase (NA) – decorate the surface of the virus particles and these proteins …

Metabolic Profiling And Polymer Formation Of Gene Silenced Potato Periderms, Qing Cai

Dissertations, Theses, and Capstone Projects

Suberin is a biopolyester constituent of specialized plant periderm tissues formed within the phellem cell walls. Suberin and waxes of the periderm layer act to prevent water diffusion, mechanical breakdown and pathogenic invasion in plants. Ferulic esters, ω-hydroxyacids and α,ω-fatty diacids are considered to be the most important linkage between aliphatic and aromatic suberin domains and also linked with cell-wall polysaccharides. The potato gene FHT (fatty ω- hydroxyacid/fatty alcohol hydroxycinnamoyl transferase) esterifies ferulic acid to suberin. Diminished levels of feruloyl transferase activity have been associated with lowered amounts of feruloyl esters of fatty acids in both suberin-associated waxes and suberin …

Lessons From The Past: Unfolding The Dynamics Among Climate, Balkan Landscapes, And Humans Over The Past Millennium, Charuta J. Kulkarni

Dissertations, Theses, and Capstone Projects

The primary objective of this doctoral dissertation is to reconstruct the environmental history of the Central Balkans (Serbia) over the past millennium utilizing biological proxies (pollen, spores, and charcoal), geochemical signals through X-ray fluorescence (XRF), statistical analyses, and atomic mass spectrometry (AMS) ¹⁴C chronology. This dissertation establishes the first chronological framework for vegetation-landscape changes in Serbia and discusses the role of humans and climate as underlying processes.

Chapter 1 discusses the background and the nature of the research problem followed by the extensive literature review on the topic of the Holocene climate and paleoecology. The state of Holocene paleoecology …

On The Free And G-Saturated Weight Monoids Of Smooth Affine Spherical Varieties For G=Sl(N), Won Geun Kim

Dissertations, Theses, and Capstone Projects

Let $X$ be an affine algebraic variety over $\mathbb{C}$ equipped with an action of a connected reductive group $G$. The weight monoid $\Gamma(X)$ of $X$ is the set of isomorphism classes of irreducible representations of $G$ that occur in the coordinate ring $\mathbb{C}[X]$ of $X$. Losev has shown that if $X$ is a smooth affine spherical variety, that is, if $X$ is smooth and $\mathbb{C}[X]$ is multiplicity-free as a representation of $G$, then $\Gamma(X)$ determines $X$ up to equivariant automorphism.

Pezzini and Van Steirteghem have recently obtained a combinatorial characterization of the weight monoids of smooth affine spherical varieties, using …

A Study Of The Impact Of Interaction Mechanisms And Population Diversity In Evolutionary Multiagent Systems, Sadat U. Chowdhury

Dissertations, Theses, and Capstone Projects

In the Evolutionary Computation (EC) research community, a major concern is maintaining optimal levels of population diversity. In the Multiagent Systems (MAS) research community, a major concern is implementing effective agent coordination through various interaction mechanisms. These two concerns coincide when one is faced with Evolutionary Multiagent Systems (EMAS).

This thesis demonstrates a methodology to study the relationship between interaction mechanisms, population diversity, and performance of an evolving multiagent system in a dynamic, real-time, and asynchronous environment. An open sourced extensible experimentation platform is developed that allows plug-ins for evolutionary models, interaction mechanisms, and genotypical encoding schemes beyond the one …

Transforming Schools Using Project-Based Learning, Performance Assessment, And Common Core Standards, D. Mark Weiss, Brian R. Belland

Interdisciplinary Journal of Problem-Based Learning

No abstract provided.

Quantized Conductance Doubling And Hard Gap In A Two-Dimensional Semiconductor–Superconductor Heterostructure, M. Kjaergaard, F. Nichele, H. J. Suominen, M. P. Nowak, M. Wimmer, A. R. Akhmerov, J. A. Folk, K. Flensberg, J. Shabani, C. J. Palmstrom, C. M. Marcus

Publications and Research

Coupling a two-dimensional (2D) semiconductor heterostructure to a superconductor opens new research and technology opportunities, including fundamental problems in mesoscopic superconductivity, scalable superconducting electronics, and new topological states of matter. One route towards topological matter is by coupling a 2D electron gas with strong spin–orbit interaction to an s-wave superconductor. Previous efforts along these lines have been adversely affected by interface disorder and unstable gating. Here we show measurements on a gateable InGaAs/InAs 2DEG with patterned epitaxial Al, yielding devices with atomically pristine interfaces between semiconductor and superconductor. Using surface gates to form a quantum point contact (QPC), we find …

An Iterative Approach To Ground Penetrating Radar At The Maya Site Of Pacbitun, Belize, Sheldon Skaggs, Terry G. Powis, Clara R. Rucker, George Micheletti

Publications and Research

Ground penetrating radar (GPR) surveys provide distinct advantages for archaeological prospection in ancient, complex, urban Maya sites, particularly where dense foliage or modern debris may preclude other remote sensing or geophysical techniques. Unidirectional GPR surveys using a 500 MHz shielded antenna were performed at the Middle Preclassic Maya site of Pacbitun, Belize. The survey in 2012 identified numerous linear and circular anomalies between 1 m and 2 m deep. Based on these anomalies, one 1 m × 4 m unit and three smaller units were excavated in 2013. These test units revealed a curved plaster surface not previously found at …

Weighted-Samgsr: Combining Significance Analysis Of Microarray-Gene Set Reduction Algorithm With Pathway Topology-Based Weights To Select Relevant Genes, Suyan Tian, Howard H. Chang, Chi Wang

Biostatistics Faculty Publications

Background: It has been demonstrated that a pathway-based feature selection method that incorporates biological information within pathways during the process of feature selection usually outperforms a gene-based feature selection algorithm in terms of predictive accuracy and stability. Significance analysis of microarray-gene set reduction algorithm (SAMGSR), an extension to a gene set analysis method with further reduction of the selected pathways to their respective core subsets, can be regarded as a pathway-based feature selection method.

Methods: In SAMGSR, whether a gene is selected is mainly determined by its expression difference between the phenotypes, and partially by the number of pathways to …

Implementing An Mhealth System For Substance Use Disorders In Primary Care: A Mixed Methods Study Of Clinicians’ Initial Expectations And First Year Experiences, Marie-Louise Mares, David H. Gustafson, Joseph E. Glass, Andrew Quanbeck, Helene Mcdowell, Fiona Mctavish, Amy Atwood, Lisa Marsch

Dartmouth Scholarship

Millions of Americans need but don’t receive treatment for substance use, and evidence suggests that addiction-focused interventions on smart phones could support their recovery. There is little research on implementation of addiction-related interventions in primary care, particularly in Federally Qualified Health Centers (FQHCs) that provide primary care to underserved populations. We used mixed methods to examine three FQHCs’ implementation of Seva, a smart-phone app that offers patients online support/discussion, health-tracking, and tools for coping with cravings, and offers clinicians information about patients’ health tracking and relapses. We examined (a) clinicians' initial perspectives about implementing Seva, and (b) the first year …

Comparative Transcriptomic Analysis Of Two Brassica Napus Near-Isogenic Lines Reveals A Network Of Genes That Influences Seed Oil Accumulation, Jingxue Wang, Sanjay Kumar Singh, Chunfang Du, Chen Li, Jianchun Fan, Sitakanta Pattanaik, Ling Yuan

Plant and Soil Sciences Faculty Publications

Rapeseed (Brassica napus) is an important oil seed crop, providing more than 13% of the world’s supply of edible oils. An in-depth knowledge of the gene network involved in biosynthesis and accumulation of seed oil is critical for the improvement of B. napus. Using available genomic and transcriptomic resources, we identified 1,750 acyl-lipid metabolism (ALM) genes that are distributed over 19 chromosomes in the B. napus genome. B. rapa and B. oleracea, two diploid progenitors of B. napus, contributed almost equally to the ALM genes. Genome collinearity analysis demonstrated that the majority of the …

Cartographic Potential Of New Technologies: Hu:Care, William B. Moore

September 29, 2016: Adaptive Structures and Innovative Solutions

No abstract provided.

Agenda, Hampton Roads Sea Level Rise/Flooding Adaptation Forum, Hr Adaptation Forum

September 29, 2016: Adaptive Structures and Innovative Solutions

Agenda for the Hampton Roads Sea Level Rise/Flooding Adaptation Forum on September 29, 2016 at the Hampton University Conference Room 204, the Bemis Laboratories, 713 Orchard Road, Hampton, VA.

Network Recovery After Massive Failures, Novella Bartolini, Stefano Ciavarella, Thomas F.La Porta, Simone Silvestri

Computer Science Faculty Research & Creative Works

This paper addresses the problem of efficiently restoring sufficient resources in a communications network to support the demand of mission critical services after a large-scale disruption. We give a formulation of the problem as a MILP and show that it is NP-hard. We propose a polynomial time heuristic, called Iterative Split and Prune (ISP) that decomposes the original problem recursively into smaller problems, until it determines the set of network components to be restored. We performed extensive simulations by varying the topologies, the demand intensity, the number of critical services, and the disruption model. Compared to several greedy approaches ISPper …

Search For Two Higgs Bosons In Final States Containing Two Photons And Two Bottom Quarks In Proton-Proton Collisions At 8 Tev, V. Khachatryan, A. M. Sirunyan, Marc M. Baarmand, Vallary Bhopatkar, Stefano Colafranceschi, Marcus Hohlmann, H Kalakhety, Daniel Noonan, Tuhin S. Roy, Francisco X. Yumiceva

Aerospace, Physics, and Space Science Faculty Publications

A search is presented for the production of two Higgs bosons in final states containing two photons and two bottom quarks. Both resonant and nonresonant hypotheses are investigated. The analyzed data correspond to an integrated luminosity of 19.7 fb-1 of proton-proton collisions at s=8 TeV collected with the CMS detector. Good agreement is observed between data and predictions of the standard model (SM). Upper limits are set at 95% confidence level on the production cross section of new particles and compared to the prediction for the existence of a warped extra dimension. When the decay to two Higgs bosons is …

Modeling And Methods Of Signal Separations With Applications In Spectroscopic Sensing, Yuanchang Sun

Mathematics Colloquium Series

Spectroscopic sensing is a powerful and a widely used family of techniques for detecting and identifying chemical and biological substances. For example, nuclear magnetic resonance (NMR) relies on the magnetic properties of the atomistic nucleus to determine the molecular structures. Raman spectroscopy (RS) uses laser light scattering and the resulting energy shift of photons to sense the vibrational modes of a sample. In remote sensing, hyperspectral imaging (HSI) makes use of hundreds of contiguous spectral bands to identify nearly invisible objects at subpixel level. Differential optical absorption spectroscopy (DOAS) is based on the light absorption property of matter to identify …

A Novel Qtl Associated With Dwarf Bunt Resistance In Idaho 444 Winter Wheat, Jianli Chen, Mary J. Guttieri, Junli Zhang, David Hole, Edward Souza, Blair Goates

Green Canyon Environmental Research Area, Logan Utah

Dwarf bunt [Tilletia controversa J.G. Kühn [as ‘contraversa’], in Rabenhorst, Hedwigia 13: 188 (1874)] is a destructive disease of wheat (Triticum aestivum L.) that reduces grain yield and quality. A number of distinct genes conferring resistance to dwarf bunt have been used by breeding programs for nearly 100 years. However, few markers were identified that can be used in selection of dwarf bunt resistance. A recombinant inbred line (RIL) population derived from the bunt-resistant germplasm, Idaho 444 (IDO444), and the susceptible cultivar, Rio Blanco, was evaluated for phenotypic reaction to dwarf bunt inoculation in four trials in …