Engineering Commons^™

Assessment Of Dobhoff Tube Malposition On Radiographs Using Deep Learning, Kevin George, Paras Lakhani, Md

Phase 1

Introduction: Dobhoff tubes (DHT) are narrow-bore flexible devices that deliver enteral nutrition for critically ill patients. Tracheobronchial insertion of DHTs presents a significant risk for pulmonary complications. Thus, DHT insertion requires radiologist confirmation of correct placement with chest x-ray (CXR), increasing clinical delays. To address this, we demonstrate the novel application of Deep Convolutional Neural Networks (DCNNs) to automatically and accurately identify DHTs in CXRs in real time.

Methods: 141 de-identified HIPAA compliant frontal view chest radiographs containing DHTs in various positions were obtained. The DHTs were first manually segmented and verified by a board certified radiologist. Images were split …

3d Convolutional Neural Networks For The Diagnosis Of 6 Unique Pathologies On Head Ct, Travis Clarke, Paras Lakhani, Md

Phase 1

Introduction: Head CT scans are a standard first-line tool used by physicians in the diagnosis of neurological pathologies. Recently, the development of deep learning models such as convolutional neural networks (CNNs) has allowed the rapid identification of bleeds and other pathologies on CT scans. This study aims to show that by training 3D CNNs with a larger, curated dataset, a more comprehensive list of potential diagnoses can be included in the detailed model.

Methods: A retrospective study was performed using a dataset of 66,000 head CT studies from the Thomas Jefferson University health system. Studies were acquired using a natural …

Indoor Navigation For Visually Impaired Person Using Inertial And Geomagnetic Information, Jayanth Ammanabrolu

All Graduate Theses, Dissertations, and Other Capstone Projects

Motivated by the need for assistance of indoor guidance for visually impaired persons (VIPs), a sensing system using inertial and geo-magnetic information has been developed to navigate a VIP person indoor. Orientation estimation, which is critical for indoor localization, is conducted using the information of the angular velocity, acceleration and geomagnetic field. By analyzing the characters of human gait, a method to eliminate the accumulated drift introduced by double integrations is introduced. By attaching the inertial sensor to the foot, the periodic stationary state will facilitate the drift correction. Also, the distinctive distortion of the geomagnetic field, which contains spatial …

On The Chirp Function, The Chirplet Transform And The Optimal Communication Of Information, Jonathan Blackledge

Articles

—The purpose of this extended paper is to provide a review of the chirp function and the chirplet transform and to investigate the application of chirplet modulation for digital communications, in particular, the transmission of binary strings. The significance of the chirp function in the solution to a range of fundamental problems in physics is revisited to provide a background to the case and to present the context in which the chirp function plays a central role, the material presented being designed to show a variety of problems with solutions and applications that are characterized by a chirp function in …

Investigating Multidimensional Characteristics Of Noise Signals With Tones From Building Mechanical Systems And Their Effects On Annoyance, Joonhee Lee, Lily M. Wang

Durham School of Architectural Engineering and Construction: Faculty Publications

This paper investigates multidimensional characteristics of tonal noise from heating, ventilation, and air-conditioning systems, besides loudness and tonality, to improve prediction of annoyance. Two studies were conducted: multidimensional scaling (MDS) analysis to determine what other perceptual signal characteristics are important and perceptual weight analysis (PWA) to understand the impact of multiple tones in a signal. In the MDS study, paired comparison tasks were conducted to gather similarity and annoyance data. Results show that the latent perceptual dimensions are related to the signal’s tonality, loudness, sharpness, and roughness. Including metrics for these perceptions, except roughness, improves the performance of earlier annoyance …

A Novel Structural Health Monitoring Method For Reinforced Concrete Bridge Decks Using Ultrasonic Guided Waves, Ece Erdogmus, Eric Garcia, Ahmad Shoaib Amiri, Michael Schuller

Durham School of Architectural Engineering and Construction: Faculty Publications

This article presents the latest improvements in a recently developed nondestructive testing (NDT) approach for early detection of various flaws (corrosion, delamination, and concrete cracking) in reinforced concrete (RC) bridge decks. The proposed method involves the use of internal steel reinforcement as a wave guide for transmitting ultrasonic waves through the system and the measurement of leaked energy from the surface of the concrete. This paper builds upon the progress made in the previously published phases of the project and aims to further explore the capabilities and practicality of the proposed NDT method. Specifically, the limits of propagation distance, effect …

Diffraction Efficiency Measurement Instrument: Demi, Usu Department Of Mechanical And Aerospace Engineering

Mechanical and Aerospace Engineering

• We designed an automated system to do help QC technicians who currently check the efficiency of VPHGs by hand.

• Why should your reader be interested?

VPHGs are used in lab equipment and medical instruments and more. The largest VPHGs (like the ones the DEMI tests) are used in giant telescopes and other astronomical applications.

Biological Agent Dispersal And Containment, Austin Williams, Ryker Hacking, Weston Craig

Mechanical and Aerospace Engineering

Purpose

• Model the flow of airborne anthrax surrogate particles through a training facility

• Design a training facility that will safely contain all the released particles

• Determine final location of the particles within the testing facility

• Determine most influential factors for particle containment

Importance

• Training for a bio-terrorist threat

• Researching airborne flow of particles is necessary to prepare for a potential threat

• Response plans depend on timely determination of the containment zone

Ganging Multiple Mechanical Sun Trackers, Katie Clark, Ben Hansen, Ben Hill, Cody Kelley, Chris Twede

Mechanical and Aerospace Engineering

The scope of this project was to design a mechanical solar tracker that implemented the algorithm/patent developed by Dr. Nicholas Flann. The solar tracker needed to be able to gang with other units using a single motor. The designed tracking unit is intended to:

• Rotate 350 degrees

• Use 3 seasonal tracks to follow the sun

• Be adjustable for wind and snow loads

• Be constructed from readily available materials

Autonomous Fixed Wing Drone, Glen Wright, Case Haws, Duke Madson, Chandler Oaks, Cory Christensen, Ryan Mears, Mike Wells

Mechanical and Aerospace Engineering

Design an autonomous system for a fixed wing drone in order to fly a repeatable pattern for testing of RF communication equipment.

• Requirements:

– Fly a repeatable pattern

– 2 km range

– Transmit Telemetry points

– Switch between manual and autonomous

• Goals:

– Create a platform compatible with the second phase of the project

– Allow for autonomous takeoff and landing procedures

– Create a platform compatible with a host of airframes

Direct Pedal Actuation, Tyler Fallentine, Mitch Peterson, Bryce Fisher, Sam Hartvigsen, Alexander Bird

Mechanical and Aerospace Engineering

Problem Description:

• The Team shall deliver a working prototype for direct pedal actuation of the brake and throttle for use in remote control of a vehicle.

• The delivered design shall:

• Measure 15 in. by 9 in. by 13 in.

• Fit in 90% of tested vehicles.

• Meet force, speed, back drive force, etc.

• Install in under 10 minutes.

Mini Rad-Dx Product Update, Tyler Child, Bradly Payne, Colton Smart, Morgan Ward

Mechanical and Aerospace Engineering

Improve Current model by:

• Redesigning case to accommodate 3 – AA batteries

• Improve ingress protection to IP67

• Make device look more Rugged

• Eliminate one of the two LCD screens

• Design for injection molding production

• Develop a mobile app

Design, Build, Fly 2019-2020 Banner Towing Bush Plane, Brayden Barton, Carlton Collet, Talon Gamble, Daniel Gardner, Hayden Harmon, Daniel Scribner, Ryley Shingleton, Trevor Smith, Sabrina Snow

Mechanical and Aerospace Engineering

• Design: A bush plane capable of deploying and towing a banner in flight, carrying passengers, and taking off within 20 ft. Create simple systems capable of restraining the passengers and stowing, deploying, and releasing the banner.

• Build: The plane, passenger subsystem, and banner subsystem using durable and lightweight materials. Select a propulsion system with the necessary power and endurance to complete the missions.

• Fly: Three missions with the fastest lap times to achieve the highest score.

• Mission 1: Fly 3 laps within 5 minutes; take off in less than 20 ft.

• Mission …

Portable Leak Test System, Tyler Pulli, Joseph Arnell, Luke Osterhout, Dustyn Roberts

Mechanical and Aerospace Engineering

Idaho National Laboratories requires an airtight seal on transportation casks to ship radioactive material. To ensure that the cask is air-tight, a system needs to be designed to measure whether air is leaking out of the seal and determines if the cask passes or fails.

Human Behavior Understanding For Worker-Centered Intelligent Manufacturing, Wenjin Tao

Doctoral Dissertations

“In a worker-centered intelligent manufacturing system, sensing and understanding of the worker’s behavior are the primary tasks, which are essential for automatic performance evaluation & optimization, intelligent training & assistance, and human-robot collaboration. In this study, a worker-centered training & assistant system is proposed for intelligent manufacturing, which is featured with self-awareness and active-guidance. To understand the hand behavior, a method is proposed for complex hand gesture recognition using Convolutional Neural Networks (CNN) with multiview augmentation and inference fusion, from depth images captured by Microsoft Kinect. To sense and understand the worker in a more comprehensive way, a multi-modal approach …

Development Of Lightweight Materials By Meso- And Microstructure Control, Myranda Shea Spratt

Doctoral Dissertations

”In this work, two lightweight structures – lattice structures and metal matrix syntactic foams (MMSF) – were studied. Honeycomb lattices were manufactured by powder bed selective laser melting (SLM) from 304L stainless steel. The wall thicknesses of these structures ranged from 0.2 to 0.5 mm. Surface roughness was the primary cause of dimensional mismatch between the expected and as-built structures with an average wall thickness increase of 0.12 mm. The strength of the honeycombs increased with increasing wall thickness. A feature of the SLM microstructure, the melt pool boundary, was also studied as a part of this work. 3D models …

Dynamics Within A Tunable Harmonic/Quartic Waveguide, Rudolph N. Kohn Jr., James A. Stickney

Space Dynamics Laboratory Publications

We present an analytical solution to the dynamics of a noninteracting cloud of thermal atoms in a cigar-shaped harmonic trap with a quartic perturbation along the axial direction. We calculate the first and second moments of position, which are sufficient to characterize the trap. The dynamics of the thermal cloud differ notably from those of a single particle, with an offset to the oscillation frequency that persists even as the oscillation amplitude approaches zero. We also present some numerical results that describe the effects of time-of-flight on the behavior of the cloud in order to better understand the results of …

Dry Canyon Well In Smithfield City, Utah, Colby Bench, Zachary Benson, Tyler Daniels, Steven Fuhr, Timothy Price, Sammie Stubbs

Civil and Environmental Engineering

The purpose of the Dry Canyon Well project is to provide an additional water supply to Smithfield City. Smithfield City anticipates a 100% increase in population over the next 40 years. To accommodate the future demand, Smithfield City hired T&S Engineers to design a well. T&S Engineers designed the chlorination system, pump house, pipeline to a nearby storage tank, and gravel road to access the well.

Pirate Rover, Joshua Wooten

Electrical and Computer Engineering

The overall objective was to create a rover that can:

• Drive on its own
• Sense objects in its path and avoid them
• Detect metallic objects
• Alert the User where these objects are located

Field Assessment Of Interreplicate Variability From Eight Electromagnetic Soil Moisture Sensors, Tsz Him Lo, Daran Rudnick, Jasreman Singh, Hope Njuki Nakabuye, Abia Katimbo, Derek M. Heeren, Yufeng Ge

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Interreplicate variability—the spread in output values among units of the same sensor subjected to essentially the same condition—can be a major source of uncertainty in sensor data. To investigate the interreplicate variability among eight electromagnetic soil moisture sensors through a field study, eight units of TDR315, CS616, CS655, HydraProbe2, EC5, 5TE, and Teros12 were installed at a depth of 0.30 m within 3 m of each other, whereas three units of AquaSpy Vector Probe were installed within 3 m of each other. The magnitude of interreplicate variability in volumetric water content (θ_v) was generally similar between a static …

Development And Application Of A Performance And Operational Feasibility Guide To Facilitate Adoption Of Soil Moisture Sensors, Meetpal S. Kukal, Suat Irmak, Kiran Sharma

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Soil moisture sensors can be effective and promising decision-making tools for diverse applications and audiences, including agricultural managers, irrigation practitioners, and researchers. Nevertheless, there exists immense adoption potential in the United States, with only 1.2 in 10 farms nationally using soil moisture sensors to decide when to irrigate. This number is much lower in the global scale. Increased adoption is likely hindered by lack of scientific support in need assessment, selection, suitability and use of these sensors. Here, through extensive field research, we address the operational feasibility of soil moisture sensors, an aspect which has been overlooked in the past, …

Prediction Of Neighbor-Dependent Microbial Interactions From Limited Population Data, Joon-Yong Lee, Shin Haruta, Souichiro Kato, Hans C. Bernstein, Stephen R. Lindemann, Dong-Yup Lee, Jim K. Fredrickson, Hyun-Seob Song

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Modulation of interspecies interactions by the presence of neighbor species is a key ecological factor that governs dynamics and function of microbial communities, yet the development of theoretical frameworks explicit for understanding context-dependent interactions are still nascent. In a recent study, we proposed a novel rule-based inference method termed the Minimal Interspecies Interaction Adjustment (MIIA) that predicts the reorganization of interaction networks in response to the addition of new species such that the modulation in interaction coefficients caused by additional members is minimal. While the theoretical basis of MIIA was established through the previous work by assuming the full availability …

Soil Structure And Texture Effects On The Precision Of Soil Water Content Measurements With A Capacitance-Based Electromagnetic Sensor, Jasreman Singh, Derek M. Heeren, Daran Rudnick, Wayne Woldt, Geng Bai, Yufeng Ge, Joe D. Luck

Department of Agricultural and Biological Systems Engineering: Faculty Publications

The physical properties of soil, such as structure and texture, can affect the performance of an electromagnetic sensor in measuring soil water content. Historically, calibrations have been performed on repacked samples in the laboratory and on in situ soils in the field, but little research has been done on laboratory calibrations with intact (undisturbed) soil cores. In this study, three replications each of disturbed and undisturbed soil samples were collected from two soil texture classes (Yutan silty clay loam and Fillmore silt loam) at a field site in eastern Nebraska to investigate the effects of soil structure and texture on …

Effects Of Farrowing Stall Layout And Number Of Heat Lamps On Sow And Piglet Production Performance, Suzanne M. Leonard, Hongwei Xin, Tami M. Brown-Bandl, Brett C. Ramirez, Somak Dutta, Gary A. Rohrer

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Most farrowing facilities in the United States use stalls and heat lamps to improve sow and piglet productivity. This study investigated these factors by comparing production outcomes for three different farrowing stall layouts (traditional, expanded creep area, expanded sow area) and use of one or two heat lamps. Data were collected on 427 sows and their litters over one year. Results showed no statistical differences due to experimental treatment for any of the production metrics recorded, excluding percent stillborn. Parity one sows had fewer piglets born alive (p < 0.001), lower percent mortality (p = 0.001) and over-lay (p = 0.003), and a …

Influence Of Watershed Characteristics On Streambed Hydraulic Conductivity Across Multiple Stream Orders, Olufemi P. Abimbola, Aaron R. Mittelstet, Troy E. Gilmore, Jesse T. Korus

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Streambeds are critical hydrological interfaces: their physical properties regulate the rate, timing, and location of fluxes between aquifers and streams. Streambed vertical hydraulic conductivity (K_v) is a key parameter in watershed models, so understanding its spatial variability and uncertainty is essential to accurately predicting how stresses and environmental signals propagate through the hydrologic system. Most distributed modeling studies use generalized K_v estimates from column experiments or grain-size distribution, but K_v may include a wide range of orders of magnitude for a given particle size group. Thus, precisely predicting K_v spatially has remained conceptual, experimental, …

Calibration Of A Common Shortwave Multispectral Camera System For Quantitative Agricultural Applications, J. Burdette Barker, Wayne Woldt, Brian Wardlow, Christopher Michael Usher Neale, Mitchell S. Maguire, Bryan Leavitt, Derek M. Heeren

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Unmanned aerial systems (UAS) for collecting multispectral imagery of agricultural fields are becoming more affordable and accessible. However, there is need to validate calibration of sensors on these systems when using them for quantitative analyses such as evapotranspiration, and other modeling for agricultural applications. The results of laboratory testing of a MicaSense (Seattle, WA, USA) RedEdge™ 3 multispectral camera and MicaSense Downwelling Light Sensor (irradiance sensor) system using a calibrated integrating sphere were presented. Responses of the camera and irradiance sensor were linear over many light levels and became non-linear at light levels below expected real-world, field conditions. Simple linear …

High-Throughput Screening Of Clinically Approved Drugs That Prime Nonviral Gene Delivery To Human Mesenchymal Stem Cells, Tyler Kozisek, Andrew Hamann, Albert Nguyen, Michael Miller, Sarah Plautz, Angela K. Pannier

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Background: Human mesenchymal stem cells (hMSCs) are intensely researched for applications in cell therapeutics due to their unique properties, however, intrinsic therapeutic properties of hMSCs could be enhanced by genetic modification. Viral transduction is efficient, but suffers from safety issues. Conversely, nonviral gene delivery, while safer compared to viral, suffers from inefficiency and cytotoxicity, especially in hMSCs. To address the shortcomings of nonviral gene delivery to hMSCs, our lab has previously demonstrated that pharmacological ‘priming’ of hMSCs with the glucocorticoid dexamethasone can significantly increase transfection in hMSCs by modulating transfection-induced cytotoxicity. This work seeks to establish a library of transfection …

An Automated Seepage Meter For Streams And Lakes, D. Kip Solomon, Eric Humphrey, Troy E. Gilmore, David P. Genereux, Vitaly Zlotnik

Department of Agricultural and Biological Systems Engineering: Faculty Publications

We describe a new automatic seepage meter for use in soft bottom streams and lakes. The meter utilizes a thin‐walled tube that is inserted into the streambed or lakebed. A hole in the side of the tube is fitted with an electric valve. Prior to the test, the valve is open and the water level inside the tube is the same as the water level outside the tube. The test starts with closure of the valve, and the water level inside the tube changes as it moves toward the equilibrium hydraulic head that exists at the bottom of the tube. …

Deep Learning Predicts Microbial Interactions From Self-Organized Spatiotemporal Patterns, Joon-Yong Lee, Natalie C. Sadler, Robert G. Egbert, Christopher R. Anderton, Kirsten S. Hofmockel, Janet K. Jansson, Hyun-Seob Song

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Microbial communities organize into spatial patterns that are largely governed by interspecies interactions. This phenomenon is an important metric for understanding community functional dynamics, yet the use of spatial patterns for predicting microbial interactions is currently lacking. Here we propose supervised deep learning as a new tool for network inference. An agent-based model was used to simulate the spatiotemporal evolution of two interacting organisms under diverse growth and interaction scenarios, the data of which was subsequently used to train deep neural networks. For small-size domains (100 mm x 100 mm) over which interaction coefficients are assumed to be invariant, we …

Swine Slurry Characteristics As Affected By Selected Additives And Disinfectants, Jon Duerschner, Shannon L. Bartelt-Hunt, Kent Eskridge, John E. Gilley, Xu Li, Amy M. Schmidt, Daniel D. Snow

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Current swine industry practice is to house animals in confinement facilities which capture and store feces and urine as slurry in pits below the production area. Additives and disinfectants may be introduced into the manure pits. This study was conducted to measure the effects of additives and disinfectants on temporal changes in swine slurry characteristics. Slurry from a commercial swine production facility in southeast Nebraska, USA was collected and transferred to 57 L reactors located within a greenhouse. Selected additives and disinfectants were added to the reactors and physical properties, chemical characteristics, and antibiotic concentrations were monitored for 40 days. …