Engineering Commons^™

Improving Fairness On Semantic Segmentation Using Large Language Models, Samuel E. Burggraf

Electrical & Computer Engineering Projects for D. Eng. Degree

As machine learning systems are increasingly integrated into critical decision-making processes, ensuring fairness in their design and implementation has become a significant concern. While fairness research has primarily focused on specific protected attributes, less attention has been given to spatial fairness, which can affect individuals at specific locations. If fairness is not addressed, models may systematically underperform in certain regions or across populations which can lead to unequal access to accurate predictions and potentially biased decision-making. Fairness considerations should extend across all machine learning applications to align with the National Institute of Standards and Technology (NIST) guidelines of fair and …

Landscaping Of Mcp: An Overview Of Mcp Mitigations And Tools, Arden Michel

Cybersecurity Undergraduate Research Showcase

The Model Context Protocol (MCP) has quickly become the standard for enabling agentic AI systems to interact with external tools, data sources, and services. Since its debut in 2024, MCP has been adopted by companies such as Google, Apple, Meta, and IBM. While this integration greatly improves the capabilities of large language models (LLMs), it also creates a new attack surface that the security community is only beginning to understand systematically.

A key architectural challenge is MCP's fundamental reliance on implicit trust: servers often run locally with high privileges, tool descriptions are accepted without question, and external servers are presumed …

Limitations Of Signature-Based Network Intrusion Detection Under Modern Traffic Conditions, Henry Guidry

Cybersecurity Undergraduate Research Showcase

Network Intrusion Detection Systems are tools used to monitor network traffic and alert to suspicious or harmful activity before it can cause harm. Signature-based versions of these systems are a foundation for intrusion detection, operating by finding common patterns and forming malicious signatures. However, three developments in modern network environments have greatly impacted the significance of Network Intrusion Detection Systems. These three developments are the near-complete adoption of end-to-end encryption, the use of sophisticated packet fragmentation techniques, and the processing demands of high-throughput networks. Encryption makes deep packet inspection practically infeasible by transforming inspectable payloads into ciphertext, forcing NIDS to …

Escaping Isolation: An Analysis Of Virtual Machine And Container Breakout Vulnerabilities, Felix Iov

Cybersecurity Undergraduate Research Showcase

Cloud computing providers rely on multi-tenant architectures to maximize resource efficiency. This infrastructure depends on virtualization, which provides isolation between clients. This comes primarily in the form of Virtual Machines (VMs) and Containers. However, “breakout attacks” or “escapes” are a critical threat where attackers bypass these isolation layers to gain unauthorized access to the host system and neighboring environments. This paper surveys virtualization escape threats and analyzes three case studies: a runc container escape (Leaky Vessels), a VMware ESXi VM escape (VSOCKPuppet), and an NVIDIA GPU container escape (NVIDIAScape). Each demonstrates different attack surfaces, including file descriptor misuse, kernel driver …

Security Risks Of Ai-Generated Code In Software Development, Maame Agyekum

Cybersecurity Undergraduate Research Showcase

Artificial Intelligence(AI) has recently forced change globally, public Institutions and as well as national security. Advancement in machine learning, mixed datasets have enabled significantly powerful systems while being capable of operating at a large scale. As innovation and technological advancement increases at rapid pace, issues like a regulation gap where scientific development far exceeds the government’s ability to regulate and establish an effective oversight. As a result, Artificial Intelligence has been controlled by private companies, leading to an industry where speed and profit often outweigh safety and ethical responsibility.

The Psychology Behind Ai-Generated Phishing And Social Engineering Attacks, A’Shya Reynolds

School of Cybersecurity Master's Level Projects and Papers

Cybercrime has evolved significantly with the integration of artificial intelligence (AI), transforming traditional phishing and social engineering attacks into highly sophisticated and personalized threats. While early phishing attempts relied on generic messaging and low success rates, modern AI-driven attacks leverage advanced data analytics, natural language processing, and behavioral prediction to manipulate victims more effectively.

This research examines how cybercriminals utilize AI to enhance psychological manipulation techniques in phishing and social engineering attacks, increasing victim susceptibility. Drawing from interdisciplinary literature in cybersecurity and psychology, this study explores key psychological mechanisms, including cognitive biases, emotional triggers, and decision-making processes that influence victim …

An Integrated Bayesian Network-Based Zero Trust Model To Quantify Cyber Risk In Small-Medium Businesses, Ahmed Abdelmagid

Engineering Management & Systems Engineering Theses & Dissertations

Small-medium businesses (SMBs) play a pivotal role in the worldwide economy as they constitute the most considerable portion of businesses in developed countries like the UK and the US. As such, SMBs are likely targets of cybercrimes by malicious agents because of their vulnerable IT systems. The digital infrastructure of SMBs is more likely to be hit by cyberattacks than large businesses due to many factors that facilitate hackers’ missions. These factors include a limited financial budget devoted to cybersecurity, a lack of knowledge, an underrating of how dangerous cyber threats are, and a shortage of IT expertise. The enormous …

Development Of A Benchmark Building Condition Index Utilizing Discrete Facility Subsets For Use In Risk Prioritization Analysis, Christopher A. May

Engineering Management & Systems Engineering Theses & Dissertations

Within the healthcare facilities management arena, key performance-based condition indices such as a calculated Building Condition Index (BCI) are currently utilized as a governing indicator of facility health and performance. However, BCI alone does not adequately support enterprise-level risk prioritization and fails to provide a validated facility-to-facility risk prioritization model. Assets within the same enterprise receiving similar sustainment funding experience different rates of degradation depending on asset type and construction age thus impairing the BCI rating scale. Statistical analysis of facility metrics indicates a strong correlation between facility degradation drivers and prediction of a subset-based benchmark BCI. The research validates …

Electromyography, Prosthetic Properties, And Running Biomechanics In Recreationally Active Persons With Lower Extremity Amputation, Paige M. Agnew

Rehabilitation Sciences Theses & Dissertations

Lower extremity loss affects nearly 150,000 individuals in the United States yearly yielding extreme health care costs annually. Typically, prosthetic devices are prescribed for 5-8 years despite known changes to an individual’s gait as time progresses. Patients can expect to undergo approximately 8-12 weeks of gait retraining to improve their comfort and efficiency. Biomechanical changes occur when running with a specific running prosthetic including considerable biomechanical and neuromuscular interlimb asymmetries and alterations in loading patterns. The purpose of this dissertation was to investigate the biomechanical demands for lower extremity prosthesis users during running. The first study synthesized peer reviewed evidence …

Fabrication Of Flexible Laser-Induced Graphene-Based Non-Enzymatic Glucose Sensor For Diabetes Management, Reagan Aviha

Electrical & Computer Engineering Theses & Dissertations

This research focuses on developing a flexible non-enzymatic glucose sensor to address the issues of cost, stability, and limited sensitivity associated with enzymatic glucose sensors. Regular monitoring of glucose levels is required to manage the global health challenge of diabetes. The sensor is built on a cost-effective, durable, flexible, conductive, and high-surface-area substrate acting as a scaffold for modification with easily tunable and electroactive species to enhance glucose detection. The electroactive materials used are zinc oxide (ZnO), palladium (Pd) and platinum (Pt). Laser-induced graphene (LIG) is created by laser engraving. ZnO, Pd and Pt are electrochemically deposited and optimized based …

A Theoretical Framework For Recursion In Complex System Governance, Gilbert Goddin

Engineering Management & Systems Engineering Theses & Dissertations

The purpose of this research was to construct an original theoretical framework for understanding recursion in Complex System Governance (CSG), grounded in the propositions and axioms of systems theory and management cybernetics. This framework addresses a research gap for cybernetic recursion relating to the governance of complex systems. Leveraging the CSG framework (Keating & Katina, 2019; Keating, 2022), holonic principles (Koestler, 1970; Mella, 2009), management cybernetics (Beer, 1979; Beer, 1984; Beer, 1995), and metacybernetics (Yolles, 2021; Yolles & Fink, 2015c; Yolles & Frieden, 2021), recursion is theorized as a governable capability, whereby metasystemic governance anticipates emerging complexity and purposefully regulates …

Extending The Job Demands-Resource Model In Classified Work Environments: A Longitudinal Analysis Of Job Demands, Resources, Job Satisfaction, And Retention Among Engineers, Gregory Gooden

Engineering Management & Systems Engineering Theses & Dissertations

The Job Demands–Resources (JD-R) model is a widely used framework for understanding how work conditions influence employee attitudes and retention-related outcomes. However, empirical evidence testing JD-R dynamics in classified technical work environments remains limited, particularly using longitudinal designs that account for structural constraints, nonrandom participation, and outcome-specific measurement challenges. Classified work is characterized by persistent demands, restricted flexibility, and security-driven limitations on available resources, raising questions about whether and how JD-R processes generalize to this context.

This study examines whether job demands and job resources predict subsequent job satisfaction and retention intent in a classified technical workforce using multi-wave longitudinal …

Engineering Cryogenic Thermal Links And Transport Systems For Conduction-Cooled Superconducting Cavities, Jacob B. Lewis

Mechanical & Aerospace Engineering Theses & Dissertations

The Thomas Jefferson National Accelerator Facility (Jefferson Lab) is currently developing a prototype conduction-cooled 915 MHz SRF cryomodule proposed for industrial use, capable of increasing the energy of an electron beam with 5 mA current by ~ 4 MeV. Two Nb3Sn resonant cavities are under development for this project, in which cryogenic cooling is provided by closed cycle refrigerators (cryocoolers). One cavity utilizes high-purity electroformed copper on the outer surface to provide heat extraction from the cavity, the other relies on high-purity aluminum thermal links. This thesis investigated the thermal conduction pathways between the cavities and cryocooler cold heads, with …

Mechanisms Of Synergy Between Nanosecond Pulsed Electric Field (Nspef) And Cold Atmospheric Pressure Plasma Discharge (Cap) In Pancreatic Cancer: The Role Of Ros-Mediated Oxidative Stress And Apoptosis, Zobia Minhas

Theses and Dissertations in Biomedical Sciences

Pancreatic ductal adenocarcinoma is a highly lethal malignancy characterized by poor prognosis and resistance to conventional therapies. Novel treatment strategies are needed to overcome this resistance. Non-thermal physical modalities, including nanosecond pulsed electric field (nsPEF) and cold atmospheric pressure plasma discharge (CAP), have emerged as potential anticancer approaches; however, the mechanisms underlying their combined effects remain unclear.

This study evaluated whether nsPEF enhances CAP-induced cytotoxicity and investigated the associated molecular mechanisms using the murine Pan02 pancreatic cancer cell line. Cell viability was assessed by WST-1 metabolic activity assays and electric cell–substrate impedance sensing (ECIS). Intracellular reactive oxygen species (ROS) were …

Enhancing Nasa Sounding Rocket Capabilities Through Composite Material Adoption, Robert Burth

Mechanical & Aerospace Engineering Theses & Dissertations

Sounding rockets are a suborbital research platform employed by NASA for heliophysics, astrophysics, geospace science investigations, and for technology development. They follow semi-parabolic trajectories and are launched using surplus military, and commercial, solid-propellant rocket motors. NASA sounding rocket payloads are comprised of standard, modular subassemblies, designed to perform specific functions critical to achieving specific mission success criteria.

Since the program’s inception, payload length and mass have trended upwards, limiting the capability of the platform to reach exospheric apogees and decreasing the time above critical altitudes to observe solar and celestial targets. To offset this trend, composite materials may be of …

Cavitation-Aware Design Of Hydrofoil Sections For Marine Propeller Blade Development, Samuel G. Bacon

Mechanical & Aerospace Engineering Theses & Dissertations

Cavitation is a major design constraint for marine propeller blade sections because it can reduce hydrodynamic performance, increase vibration and noise, and contribute to surface damage. This thesis develops and applies an exploratory computational framework for cavitation-aware hydrofoil-section design relevant to marine propeller blade development. The framework combines section-level CFD validation, CST-based geometry parameterization, pressure-based pre-screening, matched-load comparison, and focused predicted inception envelope or cavitation-bucket analysis.

The CFD methodology was validated against published YS-920 hydrofoil water-tunnel data using selected fully wetted, near-inception, and cavitating reference cases. The validation results showed that the adopted framework reproduced the key experimental trends needed …

Downstream Effects Of Post Aerobic Digestion And Divalent Cation Treatment: Dewaterability, Phosphorus Mitigation, And Process Odors, Maya Marisol Quijano Garcia

Civil & Environmental Engineering Theses & Dissertations

This study evaluated post-aerobic digestion (PAD) with aeration, mixing, and divalent cation addition to improve phosphorus capture, dewaterability, and odor control in thermal hydrolysis process (THP)–treated anaerobic digestate at the Hampton Roads Sanitation District’s Atlantic Treatment Plant. A three-day PAD process was operated under constant air flow (5 LPM) and dissolved oxygen (DO)-setpoint (0.2 mg/L) aeration conditions with Ca(OH)₂ or Mg(OH)₂ dosing. Aeration and mixing alone increased polymer demand by 14–46 % relative to untreated influent, indicating enhanced extracellular polymeric substance release. Chemical conditioning partially mitigated this increase but did not restore polymer demand to baseline levels. Dewatered cake total …

Bridging Mission And Execution: Integrating Participatory Design In Early-Phase Mission Engineering For Stakeholder Alignment And Mission Clarity, Rafi Soule

Engineering Management & Systems Engineering Theses & Dissertations

This dissertation develops and evaluates an integration-centered approach to early-phase Mission Engineering that improves mission clarity under ambiguity. Stakeholder interpretations diverge, and interoperability constraints are not surfaced early. These conditions reduce mission clarity and weaken mission-to-system mapping readiness. The dissertation proposes an integration-centered approach that strengthens early mission framing through two complementary mechanisms: (1) a participatory design-inspired, artifact-first workflow that surfaces and repairs interpretation divergence, and (2) closed-corpus, RAG-enabled retrieval that grounds mission-to-system mapping in traceable evidence. The study was organized around a construct spine linking shared understanding, stakeholder alignment, and interoperability feasibility to mission clarity. A three phase mixed-methods …

Microstructural And Thermal Studies Of Niobium On Copper Fabricated By Sputtering And Multicharged Ion Deposition, Md Obidul Islam

Electrical & Computer Engineering Theses & Dissertations

Niobium-coated copper (Nb/Cu) superconducting radiofrequency (SRF) cavities are a promising alternative to bulk niobium cavities for next-generation particle accelerators due to their reduced material cost and superior thermal conductivity of the copper substrate. However, cavity performance is fundamentally limited by the microstructural quality of sputtered Nb films and thermal transport across the Nb/Cu interface. Reduced thermal diffusivity in thin films and high interfacial thermal resistance contribute to localized heating and performance degradation under high RF fields. This dissertation addresses these challenges through a combined experimental and methodological investigation of thermal transport in Nb thin films, focusing on interface engineering using …

Bioengineering The Future Of The Human Species: H+’S Ideological Iterations Of Trans-/Posthumanity As Exemplified By Futurist Literary Texts = (Bio)Technological Solutions For (And/Or) Reification Of Systemic Inequities?, Marjorie E. Bomhower

English Theses & Dissertations

While humanity has, throughout our species’ history, endeavored to dream and create astonishing, and ever-evolving, (bio)technologies with the utopian ideals of bettering our day-to day lives and achieving greater longevity, our endeavors have (thus far) not only produced remarkable, beneficial advances in longevity and quality of life, but have also yielded devastating and dire outcomes; often at the cost and victimization of marginalized communities. This dissertation focuses on select (bio)technologies – particularly, those promoted by H+ (the most current and popular technoutopianist non-profit, “educational,” organization) – with an investigation of current and nascent (bio)technological evolutions, futurist literary texts, and critical/digital …

Biocrude From Organic Waste And Its Conversion To Hard Carbon: Experimental And Modeling Study, Isamu Umeda

Civil & Environmental Engineering Theses & Dissertations

This study establishes a technical and theoretical foundation for the efficient conversion of organic waste into biocrude and high-value carbon materials, aiming to facilitate the industrialization of hydrothermal and solvothermal liquefaction. The dissertation research is structured as follows:

Chapter 2 developed a novel chemical kinetic model for the HTL of corn stover based on elemental balances (C, H, N, and O). By incorporating temperature, residence time, solid loading as an independent variable, the model successfully predicted product yields and properties, revealing that there was non-pseudo-first-order reaction pathways in the conversion of water soluble organics in aqueous phase (AP) to hydrochar. …

Ultra-High Vacuum Outgassing Characterization Of Thermally Processed Low-Carbon Steel For Advanced Particle Accelerator And Gravitational Wave Detector Applications, Aiman H. Al-Allaq

Mechanical & Aerospace Engineering Theses & Dissertations

This dissertation investigated AISI 1020 low-carbon steel as an alternative vacuum chamber material to conventional stainless steel for ultra-high vacuum (UHV) and extreme-high vacuum (XHV) applications. After a 400 °C/48 h bake, AISI 1020 tube chambers achieved a hydrogen outgassing rate of 2.4 × 10⁻¹⁶ Torr·L·s⁻¹·cm⁻², approximately 2,300 times lower than the prebaked 316L stainless-steel comparator, among the lowest hydrogen outgassing rates ever reported for an uncoated metallic vacuum chamber. Bare and magnetite-coated AISI 1020 chambers were then compared using throughput and rate-of-rise methods. The magnetite coating yielded 5× lower water outgassing at room temperature, but this advantage disappeared after …

Observations Of An Oscillatory Mechanochemical Reaction Between Tetrathiafulvalene And Chloranilic Acid, Alastair Deans

Physics Theses & Dissertations

Mechanochemistry is the study of chemical reactions driven by the input of mechanical en ergy in addition to thermal activation. Mechanochemical reactions from powders are carried out by manual grinding or milling using various types of ball mills, or in twin extruders. While mechanochemistry has great potential affording economically and environmentally advantageous “green” synthetic methods, a drawback is that its chemical mechanisms are not well understood. One example of such a reaction currently under study involves tetrathiafulvalene, an organic elec tron donor with two polymorphs (orange and brown), and chloranilic acid, an electron acceptor. Previous results show that neat grinding …

Optimization Of Niobium Film For Particle Accelerators And Quantum Applications, Bektur Abdisatarov

Electrical & Computer Engineering Theses & Dissertations

Niobium (Nb) films play a central role in superconducting technologies used in particle accelerators and superconducting quantum circuits. Optimizing the physical properties of Nb films is therefore critical for improving both radiofrequency (RF) performance in superconducting radiofrequency (SRF) cavities and coherence in superconducting qubits. This thesis investigates the relationship between Nb film microstructure, impurity content, and electromagnetic response across these two application domains.

For particle accelerator applications, we studied Nb films deposited using high-power impulse magnetron sputtering (HiPIMS) with DC bias onto a 1.3 GHz elliptical SRF cavity. Nb film cavities exhibit a pronounced medium-field Q-slope, limiting their achievable accelerating …

Recombinant Gelonin: Purification And Functional Validation For Electroporation-Assisted Delivery, Eleni Zivla, Giedrė Šilkūnienė, Andrei G. Pakhomov, Mantas Šilkūnas, Olga N. Pakhomova

Knowledge and Creativity Expo

Type I ribosome-inactivating proteins, such as gelonin, are enzymatically potent toxins but are effectively non-toxic under physiological conditions because they are unable to cross the plasma membrane[1]. Pulsed electric fields (PEF) overcome this delivery barrier by transiently permeabilizing the plasma membrane, allowing direct cytosolic entry. This enhances gelonin cytotoxicity by several thousand-fold, highlighting gelonin’s potential as an electrochemotherapy candidate[2]. Here, we present a recombinant gelonin (rGel) expression platform in E. coli with HPLC-based purification that enables reproducible protein production and structure-guided engineering.

The mature gelonin sequence (residues 47–297) was cloned into pET-32a(+) with an N-terminally fused Trx-6×His tag and TEV …

Influence Of Gender-Specific Data Imbalance On Scgpt Fine-Tuning For Single-Cell Genomics, Mohammad Aman Ullah Al Amin, Daniil Filienko, Hong Qin

Knowledge and Creativity Expo

The transformer-based foundation model scGPT has demonstrated strong capabilities in analyzing high-dimensional single-cell RNA sequencing data. However, the impact of demographic factors, particularly gender, on model performance remains insufficiently understood. Gender is known to influence cell-type compositions in the immune system. Here, using the gender-sensitive cell-type composition in immune system, we comprehensively evaluated how the gender-sensitive imbalance of training data influences the performance of scGPT in cell-type predictions. We fine-tuned scGPT on male-only, female-only, and mixed-gender subsets from two large-scale datasets containing immune cells. We used a logit difference to measure the confidence gap between the true label and the …

A Causal Inference Methodology For Root-Cause Diagnosis In Nonstationary Industrial Time Series, Cansu Yalim

Knowledge and Creativity Expo

Industrial fault diagnosis lacks a procedure that learns time-varying causal structure from observational time series, makes identifiability limits explicit, and uses intervention-based reasoning to support root-cause assessment under industrial constraints. Although predictive maintenance can reduce downtime, diagnosis is often expert-rule-based or association-driven; pipelines may elevate downstream symptoms alongside true drivers and provide limited guidance on which feasible action would change a fault trajectory under current operating conditions. Because operating phases and fault progression create regime shifts, industrial systems rarely follow a single stable mechanism. This study develops and evaluates a three-stage, regime-aware causal diagnostic protocol based on a time-varying Dynamic …

A. Vs. I In Ai: Is There A Threshold To "Engineered" Intelligence?, Joshit Mohanty

Engineering Management & Systems Engineering Faculty Publications

Despite artificial intelligence reshaping the world, its development generates uncertainties regarding future capabilities. AI simultaneously exists as an artifact of engineering design and as autonomous intelligence, creating an observer-participant feedback loop. This paper proposes that embodied AI faces a bandwidth-limited intelligence threshold T_h that it arises from B = min(C_sens,C_Act). However, Shannon capacity measures bits while intelligence operates on concepts, necessitating a dual-channel model separating physical bandwidth B_io from representational capacity B_rep. Intelligence emerges as multi-dimensional rather than scalar, with components exhibiting different bandwidth dependencies. Surpassing T_h requires either new sensing methods expanding B, enhanced representational frameworks, or reconceptualization within …

Part Ii: Industrial Information Integration Review 2020-2025, Jinzhi Li

Information Technology & Decision Sciences Faculty Publications

Industrial Information Integration Engineering (IIIE) has become increasingly essential for improving operational efficiency and harmonizing heterogeneous industrial systems through advanced digital integration approaches. Fueled by rapid advancements in Industry 4.0 technologies—including digital twins, artificial intelligence, immersive interfaces, and IoT infrastructures—IIIE is substantially transforming traditional enterprise architecture and integration frameworks. This systematic review synthesizes recent developments and emerging trends, with particular attention to the accelerating adoption of digital twins and the deepening convergence between operational technologies (OT) and information technologies (IT) across multiple sectors. While notable progress has been made, significant challenges persist, especially in developing resilient integration architectures and fully …

Fill The Void - An Introductory Guide For Learning Medical Imaging, Reid Faith, Peter Gahan, Adam Trusty, Aleksandr Zyskin, Chukwuka Ukekwe, Denise Nchinda, Amanda K. Burbage, Alberto E. Musto

EVMS School of Health Professions Faculty Publications

No standardized, comprehensive approach for radiological image interpretation exists among medical schools in the United States of America. In order to rectify this, we outline a model aimed to help improve how medical imaging can be taught in medical schools. The VOID (Visualization, Orientation/Observation, Identification, Description) guide is a proposed universal, stepwise approach to medical image identification, interpretation, and communication. This structured guideline is aimed at building a foundation for students in early medical education. The VOID was applied to CT (Computed Tomography), MRI (Magnetic Resonance Imaging), and x-ray modalities as integrated sessions for medical students during human anatomy laboratory. …