Marine Biology Commons^™

Simulated Response Of St. Joseph Bay, Florida, Seagrass Meadows And Their Belowground Carbon To Anthropogenic And Climate Impacts, Marie Cindy Lebrasse, Blake A. Schaeffer, Richard C. Zimmerman, Victoria J. Hill, Megan M. Coffer, Peter J. Whitman, Wilson B. Salls, David D. Graybill, Christopher L. Osburn

OES Faculty Publications

Seagrass meadows are degraded globally and continue to decline in areal extent due to human pressures and climate change. This study used the bio-optical model GrassLight to explore the impact of climate change and anthropogenic stressors on seagrass extent, leaf area index (LAI) and belowground organic carbon (BGC) in St. Joseph Bay, Florida, using water quality data and remotely-sensed sea surface temperature (SST) from 2002 to 2020. Model predictions were compared with satellite-derived measurements of seagrass extent and shoot density from the Landsat images for the same period. The GrassLight-derived area of potential seagrass habitat ranged from 36.2 km2 …

Biofilm Harvesters In Coastal Settings Of The Early Palaeozoic, Nora Noffke, M. Gabriela Mángano, Luis A. Buatois

OES Faculty Publications

The ichnogenera Syringomorpha and Daedalus are here interpreted as products of infaunal biofilm harvesters. This study investigated: (1) Syringomorpha nilssoni and Syringomorpha isp. from the Cambrian Series 2‐Miaolingian Campanario Formation, northwest Argentina; and (2) Daedalus halli from the Floian Grès et Schistes de la Cluse de l’Orb Formation, Montagne Noire, France. Syringomorpha nilssoni occurs in sandy to mixed intertidal to lower shoreface deposits, whereas Syringomorpha isp. in the lower intertidal zone. Daedalus halli occurs in a lagoon and intertidal to lower shoreface sands of a barrier island. Syringomorpha and Daedalus comprise a vertical J‐shaped causative burrow and deep spreite. These …

Examining Ecological Succession Of Diatoms In California Current System Cyclonic Mesoscale Eddies, Zuzanna M. Abdala, Sophie Clayton, Sveinn V. Einarsson, Kimberly Powell, Claire P. Till, Tyler H. Coale, P. Dreux Chappell

OES Faculty Publications

The California Current System is a diatom-dominated region characterized by seasonal coastal upwelling and additional elevated mesoscale activity. Cyclonic mesoscale eddies in the region trap productive coastal waters with their planktonic communities and transport them offshore with limited interaction with surrounding waters, effectively acting as natural mesocosms, where phytoplankton populations undergo ecological succession as eddies age. This study examines diatom community composition within two mesoscale cyclonic eddies that formed in the same region of the California Current System 2 months apart and in the California Current waters surrounding them. The diatom communities were analyzed in the context of shifting environmental …

A Subsurface Eddy Associated With A Submarine Canyon Increases Availability And Delivery Of Simulated Antarctic Krill To Penguin Foraging Regions, K. Hudson, M. J. Oliver, J. Kohut, Michael S. Dinniman, John M. Klinck, M. A. Cimino, K. S. Bernard, H. Statscewich, W. Fraser

OES Faculty Publications

The distribution of marine zooplankton depends on both ocean currents and swimming behavior. Many zooplankton perform diel vertical migration (DVM) between the surface and subsurface, which can have different current regimes. If concentration mechanisms, such as fronts or eddies, are present in the subsurface, they may impact zooplankton near-surface distributions when they migrate to near-surface waters. A subsurface, retentive eddy within Palmer Deep Canyon (PDC), a submarine canyon along the West Antarctic Peninsula (WAP), retains diurnal vertically migrating zooplankton in previous model simulations. Here, we tested the hypothesis that the presence of the PDC and its associated subsurface eddy increases …

Photorespiration In Eelgrass (Zostera Marina L.): A Photoprotection Mechanism For Survival In A Co₂-Limited World, Billur Celebi-Ergin, Richard C. Zimmerman, Victoria J. Hill

OES Faculty Publications

Photorespiration, commonly viewed as a loss in photosynthetic productivity of C3 plants, is expected to decline with increasing atmospheric CO₂, even though photorespiration plays an important role in the oxidative stress responses. This study aimed to quantify the role of photorespiration and alternative photoprotection mechanisms in Zostera marina L. (eelgrass), a carbon-limited marine C3 plant, in response to ocean acidification. Plants were grown in controlled outdoor aquaria at different [CO₂]aq ranging from ~55 (ambient) to ~2121 μM for 13 months and compared for differences in leaf photochemistry by simultaneous measurements of O₂ flux and …

Impacts Of Plastic Pollution On A Pelagic Marine Mammal, The Northern Elephant Seal, Lauren M. Kashiwabara

University of the Pacific Theses and Dissertations

As plastic pollution increases, top marine predators such as marine mammals are becoming increasingly susceptible to plastic particles and their additives. Plastic particles have been found in gastrointestinal tracts and scat of many marine mammals, and quantifying plastic pollution in those that are pelagic can provide insight into plastic pollution in mesopelagic ecosystems that are just beginning to be analyzed. Adapting well-developed laboratory techniques for microplastic (MP) isolation (i.e. density separation and chemical digestion), I isolated MPs from the scat of the deepest diving pinniped, the northern elephant seal (NES), and found that100% of scat samples (n=11) contained high counts …

Beyond Cortisol: Indicators Of Stress And Negative Feedback In Plasma And Blubber Of Marine Mammals, Jessica Avalos

University of the Pacific Theses and Dissertations

Marine mammals play an important role in ecosystem stability. However, anthropogenic activity is compounding pressure on many already vulnerable populations. A potential consequence of anthropogenic disturbance is physiological stress, which can impact metabolism, immunity, and reproduction, especially if it occurs repeatedly. Previous studies on marine mammals have focused on acute stress, but the impacts of repeated stress are poorly understood. Due to its accessibility on land during haul-outs, the northern elephant seal (Mirounga angustirostris) is a good system in which to study the effects of stress in marine mammals. Stress stimulates the release of glucocorticoid hormones, primarily cortisol. Elevated cortisol …

How Do They Do It? Using Omics Approaches To Explore Metabolic Responses Associated With Hypoxia And Exercise Tolerance In The Deepest Diving Pinniped, Elizabeth R. Piotrowski

University of the Pacific Theses and Dissertations

Marine mammals such as northern elephant seals (NES) routinely experience hypoxemia and ischemia-reperfusion events to many tissues during deep dives with no apparent adverse effects. Adaptations to diving include increased antioxidants and elevated oxygen storage capacity associated with high hemoprotein content in blood and muscle. Despite experiencing decreased oxygen tensions during diving, NES likely rely on the mobilization of large lipids stores and catabolism of fatty acids to provide energy to exercising muscle while diving. To identify potential regulatory mechanisms that may underly hypoxia and exercise tolerance in diving mammals, this study used system-wide approaches to characterize changes in genes …

Population Dynamics, Relative Abundance, And Habitat Suitability Of Adult Red Drum (Sciaenops Ocellatus) In Nearshore Waters Of The North-Central Gulf Of Mexico, Crystal Hightower, J. Marcus Drymon, Amanda E. Jefferson, Matthew B. Jargowsky, Emily A. Seubert, Simon Dedman, John Mareska, Sean P. Powers

University Faculty and Staff Publications

In the Gulf of Mexico, the red drum (Sciaenops ocellatus) is an immensely popular sportfish, yet the Gulf of Mexico stock is currently managed as data-limited in federal waters. The results of the federal stock assessment conducted in 2016 for Gulf of Mexico red drum were not recommended for providing management advice. Consequently, we sought to address data gaps highlighted in the assessment by producing up-to- date overall and sex-specific growth models, standardized indices of relative abundance, and predictions of habitat suitability and by updating estimates of natural mortality. Using a time series for the period of 2006–2018, we assigned …

A Trait‐Based Framework For Assessing The Vulnerability Of Marine Species To Human Impacts, Nathalie Butt, Benjamin S. Halpern, Casey S. O'Hara, A. Louise Allcock, Beth Polidoro, Samantha Sherman, Maria Byrne, Charles Birkeland, Ross G. Dwyer, Melanie Frazier, Bradley K. Woodworth, Claudia P. Arango, Michael J. Kingsford, Vinay Udyawer, Pat Hutchings, Elliot Scanes, Emily Jane Mcclaren, Sara M. Maxwell, Guillermo Diaz-Pulido, Emma Dugan, Blake Alexander Simmons, Amelia S. Wenger, Christi Linardich, Carissa J. Klein

Biological Sciences Faculty Publications

Marine species and ecosystems are widely affected by anthropogenic stressors, ranging from pollution and fishing to climate change. Comprehensive assessments of how species and ecosystems are impacted by anthropogenic stressors are critical for guiding conservation and management investments. Previous global risk or vulnerability assessments have focused on marine habitats, or on limited taxa or specific regions. However, information about the susceptibility of marine species across a range of taxa to different stressors everywhere is required to predict how marine biodiversity will respond to human pressures. We present a novel framework that uses life-history traits to assess species’ vulnerability to a …

Mismatches In Scale Between Highly Mobile Marine Megafauna And Marine Protected Areas, Melinda G. Conners, Nicholas B. Sisson, Pierre D. Agamboue, Philip W. Atkinson, Alastair M.M. Baylis, Scott R. Benson, Barbara A. Block, Steven J. Bograd, Pablo Bordino, W. D. Bowen, Paul Brickle, Ignacio M. Bruno, Victoria González Carman, Cory D. Champagne, Daniel E. Crocker, Daniel P. Costa, Tiffany M. Dawson, Tomohiro Deguchi, Heidi Dewar, Philip D. Doherty, Tomo Eguchi, Angela Formia, Brendan J. Godley, Rachel T. Graham, Christian Gredzens, Kristen M. Hart, Lucy A. Hawkes, Suzanne Henderson, Robert William Henry Iii, Luis A. Hückstädt, Ladd M. Irvine, Sarah S. Kienle, Carey E. Kuhn, Damian Lidgard, Stephanie A. Loredo, Bruce R. Mate, Kristian Metcalfe, Jacob Nzegoue, Carmen K. Kouerey Oliwina, Rachel A. Orben, Kiyoaki Ozaki, Richard Parnell, Elizabeth P. Pike, Patrick W. Robinson, Howard C. Rosenbaum, Fumio Sato, Scott A. Shaffer, Donna J. Shaver, Samantha E. Simmons, Brian J. Smith, Guy-Philippe Sounguet, Robert M. Suryan, David R. Thompson, Megan Tierney, Dominic Tilley, Hillary S. Young, Victoria Warwick-Evans, Michael J. Weise, Randall S. Wells, Bradley P. Wilkinson, Matthew J. Witt, Sarah M. Maxwell

Biological Sciences Faculty Publications

Marine protected areas (MPAs), particularly large MPAs, are increasing in number and size around the globe in part to facilitate the conservation of marine megafauna under the assumption that large-scale MPAs better align with vagile life histories; however, this alignment is not well established. Using a global tracking dataset from 36 species across five taxa, chosen to reflect the span of home range size in highly mobile marine megafauna, we show most MPAs are too small to encompass complete home ranges of most species. Based on size alone, 40% of existing MPAs could encompass the home ranges of the smallest …

It's A Small World After All: Insights, Interferences, And Implications Of In Situ Chlorophyll Fluorescence Monitoring In Estuaries, James Silas Tanner

UNF Graduate Theses and Dissertations

Concentrations of the photosynthetic pigment chlorophyll a are used as a proxy for phytoplankton biomass by estuarine scientists to study eutrophication, food web dynamics, and harmful algal blooms. Coastal managers use chlorophyll as an indicator of nutrient pollution and for assessments to meet Clean Water Act standards. Chlorophyll a, as measured in the laboratory by extraction from monthly discrete water samples, is a core component of the National Estuarine Research Reserve (NERR) System-Wide Monitoring Program (SWMP). Field-deployable sensors based on the excitation and emission spectra of in situ chlorophyll have not been incorporated into SWMP to date because past …

The Effect Of Visitor Density And Interaction On The Behavior Of Four Ray Species (Hypanus Sabina, Hypanus Say, Pseudobatos Lentiginosus, And Rhinoptera Bonasus) Housed In An Aquatic Touch Pool, Aimee Marie Little

UNF Graduate Theses and Dissertations

Human-Animal Interactions (HAI) in zoological institutions are thought to be important in helping visitors to establish a connection with animals and thus making them more likely to contribute to conservation efforts. However, animals can respond to visitor interaction in both negative and positive ways. The growing focus on animal welfare in zoological institutions emphasizes the need for assessing different environmental inputs, including visitor interaction, and how these inputs influence behavioral outputs associated with welfare. A touch pool exhibit presents a novel interactive experience that allows visitors to directly interact with various aquatic species, including elasmobranchs, whose conservation has important implications …

Histological Comparison Of Shark Dermis Across Various Ecomorphologies, Olivia Schuitema

UNF Graduate Theses and Dissertations

The integument plays essential roles in the structural support, protection, and hydrodynamic capability among fishes. Most shark skin research has been done on the external epidermal layer containing the dermal denticles, while the larger dermis layer has been mostly ignored. The dermis layer in sharks is composed of two layers, the upper stratum laxum and the lower stratum compactum, holding supportive collagen and elastin fibers. There may be morphological and compositional differences in the dermis layers across various species of sharks, although the extent of such is unknown. These potential differences may be represented by various dermal thicknesses and different …

นิเวศวิทยาการกินอาหารของกุ้งเคย Acetes Spp. บริเวณชายฝั่งทะเลอ่าวไทยและทะเลอันดามัน ประเทศไทย, บุญวัฒน์ ผ่อนย่อง

Chulalongkorn University Theses and Dissertations (Chula ETD)

กุ้งเคยสกุล Acetes เป็นแพลงก์ตอนสัตว์ที่มีความสำคัญต่อเศรษฐกิจ การประมง และระบบนิเวศทางทะเล อย่างไรก็ตามการศึกษาทางด้านนิเวศวิทยาการกินอาหารของ Acetes spp. ยังคงมีอยู่จำกัด การศึกษานี้จึงมีวัตถุประสงค์ในการศึกษาองค์ประกอบในกระเพาะอาหาร แหล่งคาร์บอน และลำดับการกินอาหารของ Acetes spp. บริเวณปากแม่น้ำเจ้าพระยา จังหวัดสมุทรปราการ และป่าชายเลน เกาะเหลา จังหวัดระนอง ใน 4 ฤดูกาล ได้แก่ ช่วงเปลี่ยนมรสุมครั้งที่ 1 มรสุมตะวันตกเฉียงใต้ ช่วงเปลี่ยนมรสุมครั้งที่ 2 และมรสุมตะวันออกเฉียงเหนือ โดยสุ่มตัวอย่างจากเรือประมงเพื่อนำมาวิเคราะห์องค์ประกอบในกระเพาะอาหาร δ13C และ δ15N ผลการศึกษาพบ Acetes spp. 4 ชนิด ได้แก่ A. japonicus A. indicus A. vulgaris และ A. sibogae sibogae โดยทั้งหมดดำรงชีวิตเป็นผู้บริโภคทั้งพืชและสัตว์ ซึ่งมี amorphous material เป็นองค์ประกอบหลักในกระเพาะอาหารและมีลำดับการกินอาหารอยู่ระหว่าง 2 ถึง 3 องค์ประกอบในกระเพาะอาหารขึ้นกับ 4 ปัจจัย คือ ประชาคมแพลงก์ตอนในธรรมชาติ ขนาดของ Acetes spp. ขนาดและชนิดของอาหาร และพฤติกรรมการเลือกกินอาหาร ปริมาณอาหารในกระเพาะอาหารมีความสัมพันธ์เชิงบวกกับอุณหภูมิของน้ำ แต่มีความสัมพันธ์เชิงลบกับช่วงเวลาในการเก็บตัวอย่าง δ13C แสดงให้เห็นว่า A. japonicus ได้รับแหล่งคาร์บอนหลักมาจากแพลงก์ตอนบริเวณไกลชายฝั่ง ขณะที่ A. indicus A. vulgaris และ A. sibogae sibogae ได้รับแหล่งคาร์บอนหลักจากแพลงก์ตอนบริเวณใกล้ชายฝั่ง การศึกษาครั้งนี้ทำให้ทราบแหล่งอาหารของ Acetes spp. ซึ่งจะมีประโยชน์ต่อการจัดการทรัพยากร Acetes spp. และแหล่งอาหารต่อไป

Phylogenetic And Geographic Relationships Of Cheilostome Bryozoans In The Eastern Pacific, Hannah E. Lee

Cal Poly Humboldt theses and projects

The phylum Bryozoa is an incredibly diverse group of marine invertebrates with a widespread global distribution that is well suited for evolutionary studies but whose phylogenetic relationships are still poorly understood. Although recent studies on bryozoan taxonomies and phylogenies have increased, there is still a lack of assessment of species found at shallow water (<1 m) to intertidal depths. In this study, I aimed to expand the taxonomic sampling and assessment of the phylogenetic diversity of cheilostome bryozoans along the California coastline by utilizing mitochondrial DNA as well as inferring potential correlations between species presence and dispersal range both within and between rocky outer coast and sheltered harbor habitats. Illumina high-throughput sequencing was used to produce mitogenomes for cheilostome bryozoan samples collected off rocks from two rocky intertidal sites and off settlement panels from two harbor sites. Phylogenetic analyses generated evolutionary hypotheses of species relationships alongside geographic mapping of their distribution. This study identified 15 distinct species that represent 10 different families to form the first comprehensive phylogeny for multiple bryozoan families in California across a total range of approximately 973 km of coastline. Three genetically distinct species were found at multiple sites that are separated by a combination of rocky shores and sandy beaches, which indicates that the dispersal range of these species are not limited by geographic barriers along the coast of California. These results provide a future opportunity for further integration of this data with the phylogenies generated in this study to examine more robust evolutionary hypotheses for the phylogenetic and geographic relationships of Californian bryozoan species.

Implications Of Salinity Normalization Of Seawater Total Alkalinity In Coral Reef Metabolism Studies, Travis A. Courtney, Tyler Cyronak, Alyssa J. Griffin, Andreas J. Andersson

Marine & Environmental Sciences Faculty Articles

Salinity normalization of total alkalinity (TA) and dissolved inorganic carbon (DIC) data is commonly used to account for conservative mixing processes when inferring net metabolic modification of seawater by coral reefs. Salinity (S), TA, and DIC can be accurately and precisely measured, but salinity normalization of TA (nTA) and DIC (nDIC) can generate considerable and unrecognized uncertainties in coral reef metabolic rate estimates. While salinity normalization errors apply to nTA, nDIC, and other ions of interest in coral reefs, here, we focus on nTA due to its application as a proxy for net coral reef calcification and the importance for …

Effects Of Probiotics Supplementation With Lactobacillus Sp. Bacteria On Growth And Survival Rate Of Cultured Mullet Fish (Mugil Sp.) In Floating Cages, Balqees Saleh Bin Breek, Mohammed Abdullah Al-Dohail, Khaled Salem Yahya

Hadhramout University Journal of Natural & Applied Sciences

This study was conducted to determine the effect of probiotics, Lactobacillus acidophilus on the growth parameters of Mugil sp. fish, their approximate biochemical composition and the environmental conditions of their culture for 12 weeks in floating cages. Six hundreds of fish were randomly distributed in two groups of 100 fish in each floating cages (length of 1 m, width of 1 m, depth of 2 m) with an initial weight of 39.5± 0.2 g. The first group was fed with the control diet and the second group with probiotics diet. The results showed significant differences (P <0.05) between fish fed on probiotics diet and fish fed on control diet in weight gain (WG), relative growth rate (RGR) and food conversion rate (FCR). The weight gain in the probiotics group was 18.3 g, while in the control group was 12.2 g. There was no significant difference (P> 0.05) for the specific …

Removal Of Lead (Ii) From Polluted Seawater In Mukalla Coast, Hadhramout Using Biotechnology Of Dried Biomass Of Macroalgae, Gracilaria Sp And Sargassum Sp, Abdullah Salem Bawazir, Eman Hassan Ba Othman

Hadhramout University Journal of Natural & Applied Sciences

This study aimed to remove lead ions (Pb²⁺) from seawater mixed with wastewater that discharged to Mukalla coast. Water samples were collected from points near the sewage discharging sampling station. Macroalgae samples, Gracilaria sp and Sargassum sp were used for bio-sorption of Pb²⁺ from seawater in the study area. Besides, this study aimed to assess the removal efficiency of lead-heavy metal ions (Pb²⁺) from polluted seawaters in Mukalla coast by Macroalgae biomass. The effect of pH values (4.5 –7.5 ± 0.5) and different adsorbent dosages were used on the adsorption process through Winter and Summer …

Dolphins In Ny? Researchers Turn To Boat Tours For Sightings, Aaron K. Tremper

Capstones

Before 2009, coastal bottlenose dolphins were a rare sight north of New Jersey. According to local researchers, large pods of bottlenose dolphins made their way that spring/summer along Long Island. While dolphin population data by state and federal wildlife regulators are spotty, studies by local scientists suggest more dolphins have been flocking to New York since 2009. Many researchers are turning to whale-watching ventures to learn more about what dolphins are up to in the Big Apple.

https://jkt711.github.io/capstone/