Ecology and Evolutionary Biology Commons^™

Variation In Mainland Northwest Territories Late-Winter Muskox (Ovibos Moschatus) Density Estimations And Habitat Associations Above And Below Treeline., Charlotte Rentmeister

Theses and Dissertations (Comprehensive)

The Arctic and Sub-Arctic ecosystems are seeing accelerated changes in temperature, landcover, and consequently species abundance and distributions. Reliable distributions, and associated population density estimates, are essential for effective conservation and management efforts. Growing concerns from northern communities regarding the relationship between muskox and declining caribou populations strengthens the need for updated information on muskox populations within mainland Northwest Territories (NWT). The first objective for my research was to quantify and map updated winter estimates of abundance, density, and distribution of muskoxen within three recent survey regions located in mainland NWT, using a multiple covariate distance sampling method (MCDS), paired …

Mitochondrial Metabolism In Blood More Reliably Predicts Whole-Animal Energy Needs Compared To Other Tissues, Stefania Casagrande, Maciej Dzialo, Lisa Trost, Kasja Malkoc, Edyta T. Sadowska, Michaela Hau, Barbara J. Pierce, Scott R. Mcwilliams, Ulf Bauchinger

Biology Faculty Publications

Understanding energy metabolism in free-ranging animals is crucial for ecological studies. In birds, red blood cells (RBCs) offer a minimally invasive method to estimate metabolic rate (MR). In this study with European starlings Sturnus vulgaris, we examined how RBC oxygen consumption relates to oxygen use in key tissues (brain, liver, heart, and pectoral muscle) and versus the whole-organism measured at basal levels. The pectoral muscle accounted for 34-42% of organismal MR, while the heart and liver, despite their high mass-specific metabolic rate, each contributed 2.5-3.0% to organismal MR. Despite its low contribution to organismal MR (0.03-0.04%), RBC MR best predicted …

Edaphic And Climatic Regulation Of Microbial Carbon-Use Efficiency In Managed Semi-Arid Systems, Kirsten R. Butcher

All Graduate Theses and Dissertations, Fall 2023 to Present

In agricultural systems, an increasingly prevalent goal is to promote carbon sequestration into stable, mineral-associated soil organic matter, as increases in soil organic matter have been linked to increases in soil water-holding capacity and increases in nutrient availability. Because microbially-produced compounds are the foundation of soil organic matter, understanding interactions between management strategies and abiotic controls on microbial activity can prove invaluable for producers and ranchers interested in building soil organic matter and safeguarding production systems under a changing climate. The ability of microorganisms to contribute to growing soil organic matter stocks is dictated by their carbon-use efficiency, which is …

Balsam Woolly Adelgid And Host Forest Characteristics: Impacts And Interactions In Recently Invaded Areas Of Northern Utah And Southeastern Idaho, Grayson B. Jordan

All Graduate Theses and Dissertations, Fall 2023 to Present

The balsam woolly adelgid (BWA), is an invasive forest insect native to central and southern Europe. In 2017, it was detected in Utah for the first time. While BWA had limited impact as a pest in its native European range, it has caused considerable damage to true fir populations in North America. In the Intermountain region, subalpine fir has been identified as the tree species most at risk of BWA infestation. Subalpine fir provides a variety of ecosystem services and is a critical component of the spruce-fir alpine forests of the area. With an expected increase in the severity and …

Specialized Recreation, Spatial Behavior, And Ecological Implications In The Nature Reserve Of Orange County, Ca, Jake Van Deursen

All Graduate Theses and Dissertations, Fall 2023 to Present

A widespread surge in park and protected area (PPA) visitation strikes managers with the imminent challenge of preserving ecological conditions and maintaining accessibility in the open spaces that are a fundamental component to the health and wellness needs of society. In the field of recreation resource management, recreation specialization, the selective channeling of interests and abilities into a specific recreational activity, has contributed to comprehensive understandings of recreation behavior, site preference, management perceptions and conservation support. Contributing to historical understandings of specialization can inform recreation planning on the diversity of uses occurring in urban-proximate PPAs. Survey data providing information on …

Accelerated Evolution Of Sars-Cov-2 In Free-Ranging White-Tailed Deer, Dillon S. Mcbride, Sofya K. Garushyants, John Franks, Andrew F. Magee, Steven H. Overend, Devra Huey, Amanda M. Williams, Seth A. Faith, Ahmed Kandeil, Sanja Trifkovic, Lance Miller, Trushar Jeevan, Anami Patel, Jacqueline M. Nolting, Michael J. Tonkovich, J. Tyler Genders, Andrew J. Montoney, Kevin Kasnyik, Timothy J. Linder, Sarah N. Bevins, Julianna B. Lenoch, Jeffrey C. Chandler, Thomas J. Deliberto, Eugene V. Koonin, Marc A. Suchard, Philippe Lemey, Richard J. Webby, Martha I. Nelson, Andrew S. Bowman

USDA Wildlife Services: Staff Publications

The zoonotic origin of the COVID-19 pandemic virus highlights the need to fill the vast gaps in our knowledge of SARS-CoV-2 ecology and evolution in non-human hosts. Here, we detected that SARS-CoV-2 was introduced from humans into white-tailed deer more than 30 times in Ohio, USA during November 2021-March 2022. Subsequently, deer-to-deer transmission persisted for 2–8 months, disseminating across hundreds of kilometers. Newly developed Bayesian phylogenetic methods quantified how SARS-CoV-2 evolution is not only three-times faster in white-tailed deer compared to the rate observed in humans but also driven by different mutational biases and selection pressures. The long-term effect of …

Rapid Evolution Of A(H5n1) Influenza Viruses After Intercontinental Spread To North America, Ahmed Kandeil, Christopher Patton, Jeremy C. Jones, Trushar Jeevan, Walter N. Harrington, Sanja Trifkovic, Jon P. Seiler, Thomas Fabrizio, Karlie Woodard, Jasmine C. Turner, Jeri Carol Crumpton, Lance Miller, Adam Rubrum, Jennifer Debeauchamp, Charles J. Russell, Elena A. Govorkova, Peter Vogel, Mia Kim-Torchetti, Yohannes Berhane, David Stallknecht, Rebecca Poulson, Lisa Kercher, Richard J. Webby

USDA Wildlife Services: Staff Publications

Highly pathogenic avian influenza A(H5N1) viruses of clade 2.3.4.4b underwent an explosive geographic expansion in 2021 among wild birds and domestic poultry across Asia, Europe, and Africa. By the end of 2021, 2.3.4.4b viruses were detected in North America, signifying further intercontinental spread. Here we show that the western movement of clade 2.3.4.4b was quickly followed by reassortment with viruses circulating in wild birds in North America, resulting in the acquisition of different combinations of ribonucleoprotein genes. These reassortant A(H5N1) viruses are genotypically and phenotypically diverse, with many causing severe disease with dramatic neurologic involvement in mammals. The proclivity of …

Interactions Between Sediment Mechanical Structure And Infaunal Community Structure Following Physical Disturbance, William Cyrus Roger Clemo

Theses and Dissertations

Shallow, river-influenced coastal sediments are important for global carbon storage and nutrient cycling and provide a habitat for diverse communities of invertebrates (infauna). Elevated bed shear stress from extreme storms can resuspend, transport, and deposit sediments, disrupting the cohesive structure of muds, and sorting and depositing sand eroded from beaches. These physical disruptions can also resuspend or smother infauna, decreasing abundances and changing community structure. Infaunal activities such as burrowing, tube construction, and feeding can impact sediment structure and stability. However, little is known about how physical disturbance impacts short and long-term sediment habitat suitability and whether disturbance-tolerant infauna influence …

How Beavers (Castor Canadensis) Affect Habitat Availability For Two Native Oregon Turtles: Actinemys Marmorata And Chrysemys Picta Bellii, Rodé N. Krige

University Honors Theses

Oregon is home to two native freshwater turtle species: the northwestern pond turtle and the western painted turtle. Both turtles are Oregon conservation strategy species with a status rating of sensitive, indicating declining populations. Oregon’s decline in these turtle’s populations is thought to be predominantly due to loss and degradation of habitat that results from development and urbanization. Beavers’ ability to dam streams and create ponds may be creating habitat usable by turtles, but the relationship is under-studied. This study assessed water temperature, basking habitat, and overall turtle habitat suitability at beaver-dammed and control ponds in Portland, Oregon. Average basking …

Species Richness Of Moths In Parks Surrounded By Varying Levels Of ​Urbanization Around Nashville, Tennessee, Maxwell Stone, Allie Bennett

Science University Research Symposium (SURS)

Moths can act as indicators of environmental wellness due to their pollution sensitivity and the complexity of biodiversity required to support their life cycles. Urbanization can impact the occurrence of moths in protected green spaces. Higher moth species richness was hypothesized to occur in parks surrounded by more rural areas. Three metropolitan parks were chosen in the Nashville area: downtown, within a suburban neighborhood, and in a rural area. Tree canopy cover and degree of impervious surfaces were assessed for each park and surrounding area using iTreeCanopy. Moths were attracted to a white sheet using a mercury vapor bulb, UV …

Assessment Of Green Spaces In Metro Nashville Public High Schools, Webster G. Andrews, Anna Lennon, Darlene Panvini

Science University Research Symposium (SURS)

Green spaces on and near school property have been correlated to student mental health and academic achievement. However, there is a gap in the literature investigating how quality and quantity of green space is related to socioeconomic status and school economic metrics in public high schools and the surrounding neighborhoods. Nashville public high schools located in higher socioeconomic areas and having greater financial resources were predicted to provide larger, higher quality green spaces. This study combined a quantitative analysis of neighborhood socioeconomic metrics, school socioeconomic metrics, and quantity of green space (assessed using iTree Canopy) with a qualitative field assessment …

Trees In Our City How A Tree And A Small Patch Of Dirt Inspired A Classroom, Zuleika Hines

Occasional Paper Series

As a new Director in a new school, I knew that I wanted the children to have a curiosity for nature. But to lead the children to a place of discovery, they would need the opportunity to observe, play, and engage in elements of nature that would support hands-on activities both in the classroom and outside. When the opportunity came for me to build my own early childhood program, I knew that I had a unique opportunity to incorporate elements of nature in the design of the classroom. But I wanted nature to be local and the trees of our …

Quantifying The Role Of Water Quality On Nitrogen Cycling In A Trophic Estuary, Kayla Gonzalez-Boy

Symposium of Student Scholars

Jobos Bay Estuary is an intertidal, tropical estuary located in southern Puerto Rico. The estuary covers about 12 km² and has a variety of habitats, such as seagrass beds, mangroves, mud flats, and coral reefs, which play important roles in sediment trapping and water quality maintenance. Seagrasses also serve as nursery and feeding grounds and provide shelter for macrofauna. Currently, the role of seagrasses and water quality on nitrogen (N) cycling in trophic estuaries is not well constrained. Understanding variations in sediment-based effects on N cycling rates and transformations, and how they are associated with water quality, is an …

Culled Lionfish Sexual Maturity Over A Four-Year Timespan​, Christina Bland, Jurgen Hauer, Bilal Saleem, Noelle James

Symposium of Student Scholars

Lionfish are invasive in the Atlantic and the Caribbean. Like many other invasive species, they do not have any natural predators in these areas, so their population can grow unchecked. This can decrease the population of native fish species due to lionfish eating to excess. Because of their impact on native species, resource managers have incentivized lionfish hunting. Hunters were paid $6 USD for every pound of lionfish they brought in, so they possibly favored larger lionfish to increase their reward which would lead to an adaptive advantage for fish of smaller sizes. We hypothesized that the lionfish bounty program …

Lead, Cadmium, And Mercury Concentration Levels In Some Commercial Fish From The Arabian Sea And The Gulf Of Aden During The Years 2020–2022, Khaled Awadh Al-Rabaki, Salem Rabie Bazar, Ahmed Ali Balqadi, Nabil Shayif Al-Hudaifi, Marwan Ahmed Al-Habashi, Nadia Ahmed Balasuad, Muhammad Abdurrahman Ba-Omer

Hadhramout University Journal of Natural & Applied Sciences

This study was conducted to determine and evaluate the heavy metal concentrations levels: lead (Pb), cadmium (Cd), and mercury (Hg) in the meat of some commercial fish species: Grouper (Epinephelus areolatus), Emperor (Lethrinus nebulosus) and Cuttlefish (Sepia Pharaonis). A total of 84 fish samples were caught and collected from different sites in the Gulf of Aden and the Arabian Sea between January 2020 and December 2022. Some of them were sold in the cities markets of Hadhramout governorate- Yemen, and some of them were exported abroad. All samples were analyzed at the laboratories of the Faculty of Environmental Sciences and …

Twelve Wallace Myths, Charles H. Smith

Faculty/Staff Personal Papers

Alfred Russel Wallace’s (1823-1913) bicentennial year is a good time to take stock. In this presentation I discuss twelve Wallace-related issues that I feel have been poorly taken up. These range from the biological to the biographical, including subjects such as social criticism, human evolution, autobiographical memory, natural selection, national affinities, spiritualism, and wokeism.

Fusion Of Pectinal Teeth In Scorpio Kruglovi Birula, 1910 (Scorpiones: Scorpionidae), Ersen A. Yağmur, Gülhanım Yağmur

Euscorpius

A rare teratological anomaly of pecten is described and illustrated: a case of fusion in pectinal teeth in the scorpion Scorpio kruglovi Birula, 1910). It was observed that 7th and 8th teeth are fused in the right pecten. The resulting fused tooth is larger than other teeth. A smaller fulcrum located inside of the large, fused tooth whereas other fulcra are located between normally developed teeth.

Incorporating Biodiversity-Ecosystem Function Relationships Into Models And Conservation Planning, Sarah R. Weiskopf

Doctoral Dissertations

Unsustainable use of nature and climate change are leading to unprecedented biodiversity declines. These declines have cascading impacts on ecosystem function and ecosystem services, and ultimately on human well-being. International agreements have been adopted that aim to address both crises. The Paris Agreement, adopted in 2015, set global emission reductions targets. In 2022, most countries agreed to the Kunming-Montreal Global Biodiversity Framework (GBF). The GBF sets 23 ambitious targets for 2030 ranging from reducing threats to biodiversity, meeting people’s needs through sustainable use and benefit sharing, and solutions for implementation.

Although adopting global goals and targets is an important first …

The Discovery Of A Novel Bacteria From A Large Co-Assembly Of Metagenomes, Matthew Finkelberg

Masters Theses

In the summer of 2022, a co-assembly of metagenome was created using the microbes found at Barres Woods in Harvard Forest. 14 samples were taken, and sample was split into the organic and mineral layer, which totals 28 Bulk MAGs. Within this Co-assembly, 4 different genomes were found which were designated with the phylum of FCPU426. Three of which were considered medium quality and one being assigned high quality. The novel phyla first appeared in NCBI and GTDB databases in June 2018. The name FCPU426 dates to 2010 and was named based on the 16s amplicon sequencing.

The novel phylum …

Climate Change Attitudes Of United States Family Forest Owners And Their Influence On Forest Management Practices, Logan Miller

Masters Theses

Understanding family forest owners’ (FFOs’) attitudes and behaviors towards climate change will allow for more sustainable forest management practices to be implemented, helping to combat climate change and its impacts. The goals for this research are (1) to begin measuring U.S. FFO attitudes toward climate change, (2) to determine what factors impact these attitudes, and (3) to determine how they influence the FFO’s management practices using the Responsible Environmental Behavior (REB) framework (Hines et al. 1987). Chapter 1 explores the different facets of my thesis project focusing on forests and forests’ ecosystem services, forest ownership in the United States, and …