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Saving The Last Unicorns: The Genetic Rescue Of Florida’S Pillar Corals, Karen L. Neely, Cynthia L. Lewis, Keri O’Neil, Cheryl M. Woodley, Jennifer Moore, Zach Ransom, Amelia Moura, Ken Nedimyer, David Vaughan 2021 Nova Southeastern University

Saving The Last Unicorns: The Genetic Rescue Of Florida’S Pillar Corals, Karen L. Neely, Cynthia L. Lewis, Keri O’Neil, Cheryl M. Woodley, Jennifer Moore, Zach Ransom, Amelia Moura, Ken Nedimyer, David Vaughan

Marine & Environmental Sciences Faculty Articles

As stony coral tissue loss disease (SCTLD) swept through the Florida Reef Tract, one of the most severely impacted species was the iconic pillar coral, Dendrogyra cylindrus. As the species’ population experienced a precipitous decline, a collaborative rescue project collected colony fragments for safekeeping at onshore and offshore nursery facilities. Between 2015 and 2019, a total of 574 fragments representing 128 genotypes were collected. These are currently dispersed among five facilities where they continue to provide opportunities to (1) refine best husbandry practices for D. cylindrus, (2) develop treatment options for SCTLD that have been adapted for use …


A Large-Scale Experiment Finds No Evidence That A Seismic Survey Impacts A Demersal Fish Fauna, Mark G. Meekan, Conrad W. Speed, Robert D. McCauley, Rebecca Fisher, Matthew J. Birt, Leanne M. Currey-Randall, Jayson M. Semmens, Stephen J. Newman, Katherine Cure, Marcus Stowar, Brigit Vaughan, Miles J G Parsons 2021 University of Western Australia

A Large-Scale Experiment Finds No Evidence That A Seismic Survey Impacts A Demersal Fish Fauna, Mark G. Meekan, Conrad W. Speed, Robert D. Mccauley, Rebecca Fisher, Matthew J. Birt, Leanne M. Currey-Randall, Jayson M. Semmens, Stephen J. Newman, Katherine Cure, Marcus Stowar, Brigit Vaughan, Miles J G Parsons

Fisheries Research Articles

Seismic surveys are used to locate oil and gas reserves below the seabed and can be a major source of noise in marine environments. Their effects on commercial fisheries are a subject of debate, with experimental studies often producing results that are difficult to interpret. We overcame these issues in a large-scale experiment that quantified the impacts of exposure to a commercial seismic source on an assemblage of tropical demersal fishes targeted by commercial fisheries on the North West Shelf of Western Australia. We show that there were no short-term (days) or long-term (months) effects of exposure on the composition, …


Seasonal Variation In The Feeding Ecology Of Yellowfin Tuna (Thunnus Albacares) From The Northern Gulf Of Mexico, Mitchell Shay Lovell 2021 Louisiana State University and Agricultural and Mechanical College

Seasonal Variation In The Feeding Ecology Of Yellowfin Tuna (Thunnus Albacares) From The Northern Gulf Of Mexico, Mitchell Shay Lovell

LSU Master's Theses

Highly migratory fishes (e.g., tunas, billfishes, and sharks) play a significant role in the structure and function of open-ocean ecosystems and a better understanding of the food web dynamics that support their populations is essential to improve management and conservation. Here, I use complementary approaches (stomach contents, DNA barcoding, & stable isotopes) to examine seasonal variability in the feeding ecology of sub-adult (70 – 100 cm; n = 371) and adult (100 – 160 cm; n = 206) yellowfin tuna (Thunnus albacares) from the northern Gulf of Mexico over a one-year period (April 2019 – March 2020). Stomach …


Protistan Grazing Impacts Microbial Communities And Carbon Cycling At Deep-Sea Hydrothermal Vents, Sarah K. Hu, Erica L. Herrera, Amy R. Smith, Maria G. Pachiadaki, Virginia P. Edgcomb, Sean P. Sylva, Eric W. Chan, Jeffrey S. Seewald, Christopher R. German, Julie A. Huber 2021 The University of Texas Rio Grande Valley

Protistan Grazing Impacts Microbial Communities And Carbon Cycling At Deep-Sea Hydrothermal Vents, Sarah K. Hu, Erica L. Herrera, Amy R. Smith, Maria G. Pachiadaki, Virginia P. Edgcomb, Sean P. Sylva, Eric W. Chan, Jeffrey S. Seewald, Christopher R. German, Julie A. Huber

School of Earth, Environmental, & Marine Sciences Faculty Publications

Microbial eukaryotes (or protists) in marine ecosystems are a link between primary producers and all higher trophic levels, and the rate at which heterotrophic protistan grazers consume microbial prey is a key mechanism for carbon transport and recycling in microbial food webs. At deep-sea hydrothermal vents, chemosynthetic bacteria and archaea form the base of a food web that functions in the absence of sunlight, but the role of protistan grazers in these highly productive ecosystems is largely unexplored. Here, we pair grazing experiments with a molecular survey to quantify protistan grazing and to characterize the composition of vent-associated protists in …


Impact Of Seawall Type On Mollusc Size And Diversity In South Water Caye Belize: A Case Study, Morgan O. Orand, Ginger R. Fisher 2021 University of Northern Colorado

Impact Of Seawall Type On Mollusc Size And Diversity In South Water Caye Belize: A Case Study, Morgan O. Orand, Ginger R. Fisher

Ursidae: The Undergraduate Research Journal at the University of Northern Colorado

The size and diversity of molluscs on and in front of artificial and natural sea walls in the tropical rocky intertidal of South Water Caye, Belize were investigated with the intent of determining the suitability of artificial surfaces to replace natural seawalls. Four seawalls, three artificial and one natural, were observed over a period of eight days. Mollusc size did not change based on distance from the wall for any of the walls. However, there were some significant differences in the species and number of molluscs in front of each wall as well as on the walls themselves. Measures of …


Comparative Study Of Leachate Characterization: Implication For Sustainable Environmental Management, Osakpolor Marvellous Omorogieva, Victory Itua Igberase 2021 The University of Texas Rio Grande Valley

Comparative Study Of Leachate Characterization: Implication For Sustainable Environmental Management, Osakpolor Marvellous Omorogieva, Victory Itua Igberase

School of Earth, Environmental, & Marine Sciences Faculty Publications

Understanding the sources of environmental stressors, the role of geology, climate and technology would provide a guide to solving the problems posed by such stressor. The study examine the sources of wastes in Ikhueniro open dumpsite located in Benin city, Nigeria and characterize the leachate emanating from it. This will assist in adequate design of managerial scheme to tackle the menace posed by it while putting into consideration the role of geology, climate and technology. The key objectives are to carry out field study, characterize wastes in the dumpsite and collect raw leachate emanating from the wastes heap in order …


Comparative Genomics Methods And Applications, Emily N. Alden 2021 University of new mexico

Comparative Genomics Methods And Applications, Emily N. Alden

Biomedical Sciences ETDs

Virtually all fields of biology have benefited from the advancements in comparative genomics technologies, specifically in the study of evolution. In this dissertation I develop and use comparative genomic technologies to investigate the novel SARS-CoV-2 virus, assembly the first genome of the black lace domestic angelfish and identify germline genetic variants associated with altered breast cancer-specific survival. Our genome tiling array for the novel coronavirus presents a rapid and cost-effective method to sequence the entire viral genome and can be used to track the rapid evolution of viral variants in the population. The domestic angelfish is a member of the …


Leveraging Multiple Data Sources: How Catch Data, Metadata, And Genetic Samples Can Aid The Recovery Of Endangered Smalltooth Sawfish (Pristis Pectinata), Kelcee Smith 2021 Louisiana State University and Agricultural and Mechanical College

Leveraging Multiple Data Sources: How Catch Data, Metadata, And Genetic Samples Can Aid The Recovery Of Endangered Smalltooth Sawfish (Pristis Pectinata), Kelcee Smith

LSU Doctoral Dissertations

The small population sizes characteristic of many imperiled species means that they are vulnerable to both demographic and genetic extinction threats. Responses to these threats (e.g., population trends, genetic diversity estimates) are often difficult to obtain, but critical for conservation. Thus, researchers studying imperiled species may have to consult multiple data sources, collaborate with a wide variety of stakeholders, or ask new questions about previously collected data. I used this approach to understand more about the United States (U.S.) population of Pristis pectinata, an endangered elasmobranch that has declined up to 95% due to habitat loss and bycatch in …


Liner Sailing Speed Optimization Considering Wind And Waves, Zhaokun Wei, Xinlian Xie, Tiantian Bao 2021 College of Transportation, Shandong University of Science and Technology, Qingdao, China

Liner Sailing Speed Optimization Considering Wind And Waves, Zhaokun Wei, Xinlian Xie, Tiantian Bao

Journal of Marine Science and Technology–Taiwan

This paper proposes a new sailing speed optimization problem considering sea conditions such as wind and waves for a container shipping company. Since wind and waves, as exterior factors, can reduce speed, more power is employed as compensation to maintain regular service frequency and avoid delay, resulting in additional bunker consumption and higher cost. Hence, it is necessary to optimize the sailing speed according to the wind and waves. A power model was built to determine the reduced speed caused by the wind and waves for quantifying the speed reduction. On the basis of the proposed model, we developed a …


A Bilevel Mathematical Approach For The Empty Container Repositioning Proble With A Sharing And Exchanging Strategy In Liner Shipping, Dung-Ying Lin, Chieh-Ju Juan 2021 Department of Industrial Engineering and Engineering Management, National Tsing Hua University, Hsinchu City, Taiwan

A Bilevel Mathematical Approach For The Empty Container Repositioning Proble With A Sharing And Exchanging Strategy In Liner Shipping, Dung-Ying Lin, Chieh-Ju Juan

Journal of Marine Science and Technology–Taiwan

In the maritime industry, the management of empty containers is a significant issue whose costs account for a large proportion of the total world fleet running costs. To reduce repositioning activities and increase cost effectiveness, this paper proposes a solution framework considering empty container sharing and exchanging strategies to coordinate the shipping lines in a maritime transportation network. The proposed solution framework considers an empty container matching platform company and a group of shipping lines in a given shipping network. Because of the interactive relationship between the two parties, the proposed problem is formulated as a bilevel programming problem, and …


Investigating Model Solution Correctness For Parameter Uncertainty In Both Objective Function And Constraints, Shangyao Yan, Sin-Siang Wang, Chun-Yi Wang 2021 Department of Civil Engineering, National Central University, Taoyuan, Taiwan, R.O.C.

Investigating Model Solution Correctness For Parameter Uncertainty In Both Objective Function And Constraints, Shangyao Yan, Sin-Siang Wang, Chun-Yi Wang

Journal of Marine Science and Technology–Taiwan

To resolve engineering management problems encountered in the real world, optimization models are usually formulated with some parameter assumptions. Parameter uncertainty, which may arise due to changes in the environment or human error, may thus be incorporated into the objective function and the constraints. However, to simplify the modeling, the values of these parameters are usually set or projected as deterministic values. It is no wonder that the modelling results based on these inaccurate parameters are neither correct nor reliable. Thus, it is important to examine the correctness of the model results in relation to parameter uncertainty. This study aims …


Modular Design And Implementation Of An Automatic Power Factor Regulator For Energy Savings On Fishing Vessels, Chien-Hsing Lee, Shih-Hsien Hsu, Joe-Air Jiang 2021 Department of Systems and Naval Mechatronic Engineering, National Cheng Kung University, Tainan, Taiwan

Modular Design And Implementation Of An Automatic Power Factor Regulator For Energy Savings On Fishing Vessels, Chien-Hsing Lee, Shih-Hsien Hsu, Joe-Air Jiang

Journal of Marine Science and Technology–Taiwan

This study describes the experiences of modular design and implementation of an automatic power factor regulator for improving energy efficiency on Taiwanese longline fishing vessels. The load capacities of such vessels are typically divided into three categories, depending on the gross tonnage or fish carrying capacity: less than 100 kW, from 100 kW to less than 250 kW, and larger than 250 kW. For attaining proper power factor improvement, a compensation unit with a total of 30 kVar, 60 kVar and 90 kVar was sized and assembled with capacitors of 10, 15 and 20 kVar to enable control within 12 …


Key Risk Factors Influencing Harbor Tugboat Operations For Kaohsiung Port, Wen-Jui Tseng, Ji-Feng Ding, Chia-Ming Liu, Liou-Yuan Li 2021 Department of Shipping and Transportation Management, National Kaohsiung University of Science and Technology, Kaohsiung, Taiwan, R.O.C.

Key Risk Factors Influencing Harbor Tugboat Operations For Kaohsiung Port, Wen-Jui Tseng, Ji-Feng Ding, Chia-Ming Liu, Liou-Yuan Li

Journal of Marine Science and Technology–Taiwan

The harbor tugboat operation is a very important business and process of Kaohsiung port. To ensure the safety of harbor tugboat operations and to reduce the occurrence of accidents, it is an important issue to conduct a risk assessment of tugboat operations for Kaohsiung port. Hence, the main purpose of this paper is employ the analytic hierarchy process (AHP) method to evaluate key risk factors influencing the harbor tugboat operations for Kaohsiung port. At first, a total of three evalu-ation dimensions with 14 preliminary risk factors are gener-ated from literature and interviews of tugboat captains. We then applied the steps …


Free Vibration Analysis Of A Free-Free Single-Tapered Beam Carrying Arbitrary Concentrated Elements Using Modified Mode-Superposition Method (Mmsm), Chia-Chin Wu 2021 Department of Mechanical and Energy Engineering, National Chia-Yi University, Chia-Yi, Taiwan

Free Vibration Analysis Of A Free-Free Single-Tapered Beam Carrying Arbitrary Concentrated Elements Using Modified Mode-Superposition Method (Mmsm), Chia-Chin Wu

Journal of Marine Science and Technology–Taiwan

The literature contains scant information on the free vibration analyses of the loaded single-tapered beams (STBs) (i.e., STBs carrying concentrated elements (CEs)) Furthermore, even when such studies have been performed, they generally only consider the case of constrained (e.g., free-clamped (F-C)) beams. In other words, the problem of unconstrained (e.g., free-free (F-F)) loaded STBs has not yet to be addressed. Thus, the present study employs the modified mode-superposition method (MMSM) to investigate the free vibration characteristics of the F-F loaded STB carrying arbitrary various CEs. The investigation focuses particularly on the natural frequencies and mode shapes of the rigid-body motions …


Optimum Design Of The Underwater Discharge System Based On Surrogate Modeling, Jisang Ha, Myung-Il Roh, Seung-Ho Ham, Sung-Jun Lee 2021 Department of Naval Architecture and Ocean Engineering, Seoul National University, Seoul, Republic of Korea

Optimum Design Of The Underwater Discharge System Based On Surrogate Modeling, Jisang Ha, Myung-Il Roh, Seung-Ho Ham, Sung-Jun Lee

Journal of Marine Science and Technology–Taiwan

Underwater vehicles are equipped with a device for discharging projectiles, called the underwater discharge system. Because these vehicles have limited space, many studies have attempted to reduce the volume of the underwater discharge system while improving its performance. However, owing to the characteristics of the system, the occupied volume and performance conflict with each other. Therefore, minimizing the occupied volume while satisfying the required performance criteria is the most significant requirement in the design stage. To address this, an optimization problem for the underwater discharge system was mathematically formulated and solved using multi-objective genetic algorithms. Additionally, we proposed a method …


An Analysis Of Key Influencing Factors On Island Tourism Revisit Intentions – Evidence From The Matsu Islands, Chun-Chieh Wang, Hsiao-Chuan Liu, Hsuan-Shih Lee, Cheng-Chi Chung 2021 Dept. of Shipping and Transportation Management, National Taiwan Ocean University, Taiwan

An Analysis Of Key Influencing Factors On Island Tourism Revisit Intentions – Evidence From The Matsu Islands, Chun-Chieh Wang, Hsiao-Chuan Liu, Hsuan-Shih Lee, Cheng-Chi Chung

Journal of Marine Science and Technology–Taiwan

Sightseeing and tourism not only brings economic benefits to the local community but also drive the development of related industries. In 1992, when the Matsu’s battlefield mission was dissolved, tourism became one of the key development strategies to boom the region. Although the number of visitors to Matsu Islands has risen significantly in recent years, how to increase the island’s willingness to revisit the island has been an important issue. Since local tourism has its own characteristics, island tourism marketing strategies should be different. Many previous studies have quantified the relationship between tourism area satisfaction and willingness to revisit, but …


3d Numerical Simulation Of Kuroshio-Induced Wake Near Green Island, Taiwan, Tien-Hung Hou, Jen-Yi Chang, Chia-Cheng Tsai, Tai-Wen Hsu 2021 epartment of Marine Environmental Engineering, National Kaohsiung University of Science and Technology, Kaohsiung City, Taiwan

3d Numerical Simulation Of Kuroshio-Induced Wake Near Green Island, Taiwan, Tien-Hung Hou, Jen-Yi Chang, Chia-Cheng Tsai, Tai-Wen Hsu

Journal of Marine Science and Technology–Taiwan

In this research, Kuroshio-induced vortex shedding in the lee of Green Island was numerically studied using the three-dimensional Princeton Ocean Model. The temporal and spatial characteristics of the vortex street were analyzed at different tidal levels, wind fields and water depths. The nu-merical results were validated by comparing with in-situ measurements from the Green Island tidal station, shipboard acoustic doppler current profiler (ADCP), conductivi-ty-temperature-depth (CTD) profiler, and moderate resolution imaging spectroradiometer (MODIS) satellite image datasets. Also, the three-dimensional results of velocity, temperature, and salinity fields were compared well with observational data. Furthermore, the influence depths of the wind effect and …


Intelligent Fuzzy Control With State-Derivative Feedback For Takagi-Sugeno Fuzzy Stochastic Singular Systems, Wen-Jer Chang, Kuang-Yow Lian, Cheung-Chieh Ku, Che-Lun Su 2021 Department of Marine Engineering, National Taiwan Ocean University, Keelung, Taiwan, R. O. C.

Intelligent Fuzzy Control With State-Derivative Feedback For Takagi-Sugeno Fuzzy Stochastic Singular Systems, Wen-Jer Chang, Kuang-Yow Lian, Cheung-Chieh Ku, Che-Lun Su

Journal of Marine Science and Technology–Taiwan

This document deals with the problem of passive fuzzy controller design with the state-derivative feedback approach for the nonlinear stochastic singular systems. Recently, the singular systems have a greater focus on literature because they can keep more physical system characteristics than conventional systems. At first, the Takagi-Sugeno fuzzy stochastic singular models are used to represent the nonlinear stochastic singular systems. Then, the state-derivative feedback approach and parallel distributed compensation method are employed to design the passive fuzzy controllers. In the design process, the Lyapunov stability conditions are developed subject to multiple performance constraints, including the passivity constraint and decay rate …


Sea Ice Warning Visualization And Path Planning For Ice Navigation Based On Radar Image Recognition, Tsung-Hsuan Hsieh, Shengzheng Wang, Huijia Gong, Wei Liu, Ning Xu 2021 Merchant Marine College, Shanghai Maritime University, Shanghai, China

Sea Ice Warning Visualization And Path Planning For Ice Navigation Based On Radar Image Recognition, Tsung-Hsuan Hsieh, Shengzheng Wang, Huijia Gong, Wei Liu, Ning Xu

Journal of Marine Science and Technology–Taiwan

Ice navigation is currently one of the important issues in path planning studies. Most studies are using sea ice models or ice charts for large-scale path planning, but the weather and ice conditions in the polar waters usually change quickly and are not easy to predict. Under these conditions, small-scale path planning that can be adjusted in time for sea ice collision avoidance is needed. This study uses marine radar imaging to reconstruct the ice navigation scene, and establishes a visual-ization function of sea ice warning on the radar image. We combine the bidirectional rapidly-exploring random tree (B-RRT) algorithm and …


Enhancing Marine Administrative Management Based On Human Factor Through Safety Criteria, Wen-Cheng Lin, Hsin-Hung Cheng 2021 Department of Business Administration, National Taipei University of Business

Enhancing Marine Administrative Management Based On Human Factor Through Safety Criteria, Wen-Cheng Lin, Hsin-Hung Cheng

Journal of Marine Science and Technology–Taiwan

This study aims to improve maritime safety by enhancing administrative management based on human factors. This study used Fuzzy analytic hierarchy process to analyze the risks and threats regarding safety maritime criteria. Establishing administrative reform is given the highest priority. First, the current model for crew training system is explored. Second, the marine surveyor is examined to determine if it is professional enough for inspection work. Third, the investigation system used by maritime safety investigators should be inspected. The suggestions mentioned expect to establish a maritime administrative reform that could pave the way for the application of maritime safety around …


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