Macroalgae Decrease Growth And Alter Microbial Community Structure Of The Reef-Building Coral, Porites Astreoides, 2012 Department of Biological Sciences, Florida International University; Oregon State University
Macroalgae Decrease Growth And Alter Microbial Community Structure Of The Reef-Building Coral, Porites Astreoides, Rebecca Vega Thurber, Deron E. Burkepile, Adrienne M.S. Correa, Andrew R. Thurber, Andrew A. Schantz, Rory Welsh, Catharin Pritchard
Department of Biological Sciences
With the continued and unprecedented decline of coral reefs worldwide, evaluating the factors that contribute to coral demise is of critical importance. As coral cover declines, macroalgae are becoming more common on tropical reefs. Interactions between these macroalgae and corals may alter the coral microbiome, which is thought to play an important role in colony health and survival. Together, such changes in benthic macroalgae and in the coral microbiome may result in a feedback mechanism that contributes to additional coral cover loss. To determine if macroalgae alter the coral microbiome, we conducted a field-based experiment in which the coral Porites …
Sequencing And Analysis Of The Gastrula Transcriptome Of The Brittle Star Ophiocoma Wendtii, 2012 University of South Florida
Sequencing And Analysis Of The Gastrula Transcriptome Of The Brittle Star Ophiocoma Wendtii, Roy Vaughn, Nancy Garnhart, James R. Garey, W. Kelley Thomas, Brian T. Livingston
Hubbard Center for Genome Studies (HCGS)
Background
The gastrula stage represents the point in development at which the three primary germ layers diverge. At this point the gene regulatory networks that specify the germ layers are established and the genes that define the differentiated states of the tissues have begun to be activated. These networks have been well-characterized in sea urchins, but not in other echinoderms. Embryos of the brittle star Ophiocoma wendtii share a number of developmental features with sea urchin embryos, including the ingression of mesenchyme cells that give rise to an embryonic skeleton. Notable differences are that no micromeres are formed during cleavage …
A New Us Polar Research Vessel For The Twenty-First Century, 2012 Stanford University
A New Us Polar Research Vessel For The Twenty-First Century, Robert B. Dunbar, Jon Alberts, Carin Ashjian, Vernon Asper, Dale Chayes, Eugene Domack, Hugh Ducklow, Bruce Huber, Lawrence Lawver, Daniel Oliver, Doug Russell, Craig R. Smith, Maria Vernet
Faculty Publications
Scientific and political interests at the poles are significant and rapidly increasing, driven in part by the effects of climate change and emerging geopolitical realities. The polar regions provide important services to global ecosystems and humankind, ranging from food and energy to freshwater and biodiversity. Yet the poles are experiencing changes at rates that far outpace the rest of the planet. Coastal Arctic communities are impacted by climate change through coastal erosion, sea level rise, ice loss, and altered marine food webs, threatening the future of their subsistence lifestyle. Climate change has dramatically increased the melt rate of ice sheets …
Small-Scale Mapping Of Indeterminate Arborescent Acroporid Coral (Acropora Cervicornis) Patches, 2012 Nova Southeastern University
Small-Scale Mapping Of Indeterminate Arborescent Acroporid Coral (Acropora Cervicornis) Patches, Brian K. Walker, E. A. Larson, Alison L. Moulding, David S. Gilliam
Marine & Environmental Sciences Faculty Articles
Western Atlantic populations of the staghorn coral Acropora cervicornis have drastically declined over the past few decades. Hence, interest in its ecology and spatial extent has increased. Acroporid corals with indeterminate arborescent growth like A.cervicornis primarily reproduce asexually by fragmentation, which can lead to extensive monotypic patches. Since fragmentation is a major component in indeterminate acroporid reproduction, these patches may expand or move over time. Periodic perimeter mapping facilitates comparison of patch areas to determine movement or expansion. A repeatable, low-cost method using a differential GPS carried by a snorkeler was employed to map the perimeter of A.cervicornis …
Prioritizing Key Resilience Indicators To Support Coral Reef Management In A Changing Climate, 2012 Florida Institute of Technology
Prioritizing Key Resilience Indicators To Support Coral Reef Management In A Changing Climate, Tim R. Mcclanahan, Simon D. Donner, Jeffrey Allen Maynard, M. Aaron Macneil, Nicholas Anthony James Graham, Joseph M. Maina, Andrew C. Baker, Jahson Berhane Alemu I, Maria Beger, Robert Van Woesik
Ocean Engineering and Marine Sciences Faculty Publications
Managing coral reefs for resilience to climate change is a popular concept but has been difficult to implement because the empirical scientific evidence has either not been evaluated or is sometimes unsupportive of theory, which leads to uncertainty when considering methods and identifying priority reefs. We asked experts and reviewed the scientific literature for guidance on the multiple physical and biological factors that affect the ability of coral reefs to resist and recover from climate disturbance. Eleven key factors to inform decisions based on scaling scientific evidence and the achievability of quantifying the factors were identified. Factors important to resistance …
Ocean Governance: The New Zealand Dimension Full Report, 2012 Victoria University of Wellington
Ocean Governance: The New Zealand Dimension Full Report, Michael Vincent Mcginnis
Working Papers
The primary goal of this report is to provide interested members of the public and policymakers with a general overview and a description of the types of principles, planning tools, and policy instruments that can be used to strengthen and improve marine governance in New Zealand. As extractive uses (hydrocarbons and minerals, in particular) ramp up and others are explored and brought on line in the marine areas of New Zealand, the need will increase for a more integrative, ecosystem-based approach to marine governance.
This study is based on the following types of analysis:
• a review of the literature …
The Role Of Individual Behavior Type In Mediating Indirect Interactions, 2012 University of South Carolina - Columbia
The Role Of Individual Behavior Type In Mediating Indirect Interactions, Blaine D. Griffen, Benjamin J. Toscano, John Gatto
Faculty Publications
Trait-mediated indirect interactions (TMII) play an important role in structuring natural communities, and numerous studies have experimentally demonstrated their presence in a variety of systems. However, these studies have largely examined the presence or absence of traits that are responsible for these interactions, without considering natural variation between individuals in the extent to which these traits are manifested. We used a well-documented TMII to investigate the importance of individual behavior type for determining the strength of the TMII. The toadfish Opsanus tau has an indirect positive influence on bivalve survival because the mud crab Panopeus herbstii, a consumer of bivalves, …
Determining Distribution And Size Of Larval Pacific Geoduck Clams (Panopea Generosa Gould 1850) In Quartermaster Harbor (Washington, Usa) Using A Novel Sampling Approach, 2012 University of Washington Tacoma
Determining Distribution And Size Of Larval Pacific Geoduck Clams (Panopea Generosa Gould 1850) In Quartermaster Harbor (Washington, Usa) Using A Novel Sampling Approach, Bonnie Becker, Michael D. Behrens, Yvonne A. Shevalier, Christine M. Henzler, Elizabeth A. Hoaglund, Brenda K. Lemay
SIAS Faculty Publications
Realistic species-specific information about larval life history is necessary for effective management of shellfish and parameterization of larval connectivity models. The patchiness of dispersing larvae, and the resources needed for sorting and identifying them, has limited many studies of larval distribution in the field, especially for species that are less common. In particular, little is known about in situ larval distribution of Pacific geoduck clams (Panopea generosa Gould 1850), a commercially important species found in Puget Sound, WA. A novel approach-time-integrating larval tube traps paired with molecular identification and sorting (FISH-CS)-was used to determine the distribution of geoduck larvae over …
Nutritional Content Of Rhinoceros Auklet (Cerorhinca Monocerata) Bill Loads, 2012 SUNY Cortland
Nutritional Content Of Rhinoceros Auklet (Cerorhinca Monocerata) Bill Loads, Dustin Taylor, Ron Heintz
STAR Program Research Presentations
Nutritional Content of Rhinoceros Auklet Bill Loads
Dustin E Taylor
Abstract
An adult Rhinoceros Auklet (Cerorhinca monocerata) can only catch and carry a limited amount of prey to their nestlings after a foraging trip. The auklets therefore must maximize their efficiency by bringing back the most proportionally nutritious prey items to their nestlings. The prey carried back to the nesting sites (known as a ‘bill load’) can contain whole fish, as well as parts, most commonly fish heads. This study is aimed to determine whether returning with just heads to the nestlings was proportionally more nutritious than bringing …
A Genetic Survey Of English Sole Populations In The Salish Sea, 2012 California State University - East Bay
A Genetic Survey Of English Sole Populations In The Salish Sea, Elizabeth S. Gutierrez, Gary A. Winans, Jon Baker, Amanda Cope
STAR Program Research Presentations
This summer I interned at the Northwest Fisheries Science Center in Seattle, WA and participated in NOAA’s Salish Sea Project. The Salish Sea Project’s goal is to identify genetically distinctive groups of species in the Salish Sea that may have unique evolutionary and/or adaptive backgrounds. These findings will allow NOAA to promote and monitor the natural production of species in the Salish Sea, to select representative populations for experimental work regarding pollution, ocean acidification and climate change, to contribute to managing the ecosystem for intra- and inter-species diversity, and to help make informed decisions about adaptive management and marine protected …
Using Stable Isotope Analysis To Study Zooplankton Trophic Ecology In San Francisco Estuary, 2012 California State University - Chico
Using Stable Isotope Analysis To Study Zooplankton Trophic Ecology In San Francisco Estuary, Steven C. Westbrook, Julien Moderan, Wim Kimmerer
STAR Program Research Presentations
Zooplankton biomasses in estuaries are often high and represent an important food source for fish, like theendangered Delta Smelt. Human interferences (nitrates from crops, freshwater flow alteration, invasive species introduction…) have altered the structure of the San Francisco Estuary (SFE) ecosystem. We use stable isotope analysis to improve our knowledge of the planktonic food web in the SFE and gain insights into its evolution over the past decades. Every living thing has a specific isotopic signature. For example, in the plankton we study exists Carbon 13 and Carbon 12. Carbon 13 is different only because it has one extra neutron, …
Functional Response Of Protected Larval Stage Delta Smelt (Hypomesus Transpacificus), 2012 California State University Stanislaus
Functional Response Of Protected Larval Stage Delta Smelt (Hypomesus Transpacificus), Jorge Ruiz, Lindsay Sullivan, Wim Kimmerer, Joan Lindberg
STAR Program Research Presentations
Delta smelt (Hypomesus transpacificus) is a protected slender-bodied fish endemic to the San Francisco Estuary. Smelt prey upon various zooplankton including the copepods such as Pseudodiaptomus forbesi. This experiment studied the prey maximum feeding rate of 2 larval stages (21 DHP, 35 DPH) of Delta smelt on various concentrations of P. forbesi. The copepod prey was offered at 7 different concentrations (2No./L–120No./L). After feeding was terminated the free prey and ingested prey were counted and analyzed to find the feeding rate of Delta smelt. Maximum feeding rate was found to be at much higher prey densities …
Developing Monitoring Methods For Leptasterias Spp. As Sentinel Species In Detecting Local Environmental Changes, 2012 California Polytechnic State University - San Luis Obispo
Developing Monitoring Methods For Leptasterias Spp. As Sentinel Species In Detecting Local Environmental Changes, Zachary Sturbaum, Kathryn Nuessly, Riley J. Smith, C. Sarah Cohen
STAR Program Research Presentations
Leptasterias spp., a six-rayed sea star, is found in rocky intertidal habitats ranging from Alaska to central California. Leptasterias spp. can be monitored on a broad scale throughout their range by a variety of means using timed counts and random plot censusing in order to detect both large-scale and local-level changes in the environment due to climate change, land-based human activity, or other environmental events. Leptasterias brood their young externally until the embryos grow into fully developed juveniles. These juveniles disperse by crawling away, limiting their dispersal potential. This localized dispersal provides an opportunity to use Leptasterias spp …
Understanding The Success And Failure Of Oyster Populations: Periodicities Of Perkinsus Marinus, And Oyster Recruitment, Mortality, And Size, 2012 Old Dominion University
Understanding The Success And Failure Of Oyster Populations: Periodicities Of Perkinsus Marinus, And Oyster Recruitment, Mortality, And Size, Thomas M. Soniat, John M. Klinck, Eric N. Powell, Eileen E. Hofmann
CCPO Publications
Ten-year time series (1992 to 2002) of salinity, Dermo disease, and size-class structure and mortality measured for an eastern oyster (Crassostrea virginica) population at a reef in Bay Tambour, Terrebonne Parish, LA, were analyzed using wavelet techniques to determine dominant frequencies and correlations. Along the Gulf Coast of the United States, Dermo disease (caused by Perkinsus marinus) responds to the El Nino-Southern Oscillation (ENSO) climate signal through its response to salinity. During the La Nina portion of ENSO, decreased rainfall leads to an increase in salinity, which triggers a rise in Dermo disease prevalence and intensity, producing increased oyster mortality. …
The Breathing Of The Bays, 2012 University of Connecticut - Avery Point
The Breathing Of The Bays, Jamie Vaudrey, Margaret (Peg) A. Van_Patten (Editor)
Wrack Lines
Bays in Long Island Sound and beyond have natural rhythms like breathing. Stress can impact the health of these natural ecosystems. While Long Island Sound has been examined for the extent of hypoxia in the summer, small embayments have not been examined carefully. In this article, two researchers investigate the oxygen, or lack of, in small bays of Long Island Sound.
Characterization Of Benthic Communities, 2012 National Oceanic and Atmospheric Administration
Characterization Of Benthic Communities, Gregory A. Piniak, Shay Viehman, Christine M. Addison, Nicole D. Fogarty
Marine & Environmental Sciences Faculty Reports
No abstract provided.
The Bathypelagic Biome Of The Atlantic Ocean: Character And Ecological Discreteness Of The Fish Fauna, 2012 Virginia Institute of Marine Science
The Bathypelagic Biome Of The Atlantic Ocean: Character And Ecological Discreteness Of The Fish Fauna, Tracey Sutton, Odd Aksel Bergstad, Ann Bucklin, Scott E. Burghart, April B. Cook, Tone Falkenhaug, T. L. Hopkins, F. M. Porteiro, Sigrid Schiel, Joseph J. Torres, M. Vecchione, Peter Wiebe
Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures
Recent global synthetic analyses have revealed that marine taxonomic inventories are far from complete, nowhere more so than in the deep-pelagic ocean. At over a billion km3, it is the largest biome on Earth, yet only a tiny fraction of the biogeographic records include the bathypelagic fauna. This data gap served as the impetus for recent deepwater surveys, many of which have altered our perceptions of pelagic ecosystems. Here we examine data from four deep-pelagic (0-5000+ m) sampling programs in the Atlantic (60°N-25°S) in order to assess the character of bathypelagic fish communities with respect to faunal distinctiveness and ecological …
The Consumption Of Dha During Embryogenesis As An Indicative Of The Need To Supply Dha During Early Larval Development: A Review, 2012 Florida Institute of Technology
The Consumption Of Dha During Embryogenesis As An Indicative Of The Need To Supply Dha During Early Larval Development: A Review, Joana Figueiredo, Junda Lin, Justin Anto, Luis Narciso
Ocean Engineering and Marine Sciences Faculty Publications
The establishment of an adequate larval diet for crustacean and fish often involves a series of time-consuming and expensive trial and errors. Despite being nutritionally poor, rotifers and Artemia are the most commonly used preys in larviculture. Whether (and to what extent) the prey needs to be enriched with essential fatty acids differs from species to species. We hypothesized that the DHA content of a newly spawned eggs and its consumption through embryogenesis can be a good indicator of the need to enrich the prey with DHA. In order to assess this hypothesis, we performed a search in the scientifc …
Testing The Salinity Tolerance Levels Of Similar Invasive Species Found In The San Francisco Bay, 2012 Romberg Tiburon Center for Environmental Studies, San Francisco State University & California State University - Sacramento
Testing The Salinity Tolerance Levels Of Similar Invasive Species Found In The San Francisco Bay, Julia M. Smith, C. Sarah Cohen, Elizabeth Sheets
STAR Program Research Presentations
Testing the salinity tolerance levels of similar invasive species found in the San Francisco Bay
Julia Smith1,2, Elizabeth Sheets2, and C. Sarah Cohen2
1Department of Teacher Education, California State University, Sacramento 2Department of Biology and Romberg Tiburon Center, San Francisco State University
Three non-indigenous colonial ascidian species, Botrylloides violaceus, Botrylloides diegensis, and Botryllus schlosseri, have become well established in San Francisco Bay. Two species, B. violaceous and B. schlosseri, are globally distributed, and understanding the salinity ranges and tolerances of these successful invaders in their introduced habitats is important for …
Effects Of Pristane On Growth Of Pink Salmon (Oncorhynchus Gorbuscha), 2012 Western Washington University
Effects Of Pristane On Growth Of Pink Salmon (Oncorhynchus Gorbuscha), Brielle D. Kemis, Bonita Nelson
STAR Program Research Presentations
Pristane is a naturally occurring hydrocarbon that is generated by copepods in marine ecosystems. Organisms that eat copepods do not readily metabolize pristane, which causes it to accumulate throughout the marine food web. Understanding how pristane affects marine fish is essential because pristane is often used as a bioindicator in lab studies and may be influencing results in those studies. Also, this hydrocarbon may significantly reduce growth of marine fish in the wild. A previous study indicated that pristane is an appetite suppressant and growth retardant in fish. However, the study implemented a feeding regime with unnaturally high levels of …