Marine Biology Commons^™

Prey Naïveté And Predator-Prey Interactions Between Pterois Volitans, Pomacentridae, And Tetraodontidae In Two Reefs In The Guna Yala Archipelago, Panama, Jesse Garrett-Larsen

Independent Study Project (ISP) Collection

The invasion of Pterois volitans along the Atlantic coast of the Americas is one of the top marine conservation issues of the century. Prey naïveté has been suggested as a mechanism for the success of P. volitans, but conclusive field observations have not been completed. This study tested for prey naïveté in situ by comparing time spent by Pomacentridae and Tetraodontidae in close proximity to P. volitans and a native predator, Cephalopholis cruentata. Difference in time spent by Pomacentridae and Tetraodontidae in the presence of the two predators was observed. The predators P. volitans and C. cruentata were sequentially observed …

A Novel Diffuse Fraction-Based Two-Leaf Light Use Efficiency Model: An Application Quantifying Photosynthetic Seasonality Across 20 Ameriflux Flux Tower Sites, Hao Yan, Shao-Qiang Wang, Kai-Liang Yu, Bin Wang, Qin Yu, Gil Bohrer, Dave Billesbach, Rosvel Bracho, Abdullah F. Rahman, Herman H. Shugart

School of Earth, Environmental, & Marine Sciences Faculty Publications

Diffuse radiation can increase canopy light use efficiency (LUE). This creates the need to differentiate the effects of direct and diffuse radiation when simulating terrestrial gross primary production (GPP). Here, we present a novel GPP model, the diffuse-fraction-based two-leaf model (DTEC), which includes the leaf response to direct and diffuse radiation, and treats maximum LUE for shaded leaves (ɛmsh defined as a power function of the diffuse fraction (Df)) and sunlit leaves (ɛmsu defined as a constant) separately. An Amazonian rainforest site (KM67) was used to calibrate the model by simulating the linear relationship …

Life History And Management Methods For Blueline Tilefish (Caulolatilus Microps) From The United States Mid-Atlantic Region, Michael A. Schmidtke

OES Theses and Dissertations

Blueline tilefish (Caulolatilus microps) have recently undergone an increase in landings from waters off the US Mid-Atlantic region (Virginia-Massachusetts). Currently, life history characteristics of blueline tilefish in this area are undescribed. Additionally, appropriate indices of population abundance are not available for this region, necessitating the use of data-limited management methods to set restrictions for harvest of blueline tilefish in this area. This dissertation describes growth and reproductive characteristics of blueline tilefish caught off the coast of Virginia and explores improvements of data-limited management methods that have been applied to blueline tilefish in the US Mid-Atlantic. Blueline tilefish from …

Linear And Nonlinear Effects Of Temperature And Precipitation On Ecosystem Properties In Tidal Saline Wetlands, Laura C. Feher, Michael J. Osland, Kereen T. Griffith, James B. Grace, Rebecca J. Howard, Camille L. Stagg, Nicholas M. Enwright, Ken W. Krauss, Christopher A. Gabler, Richard H. Day, Kerrylee Rogers

School of Earth, Environmental, & Marine Sciences Faculty Publications

Climate greatly influences the structure and functioning of tidal saline wetland ecosystems. However, there is a need to better quantify the effects of climatic drivers on ecosystem properties, particularly near climate-sensitive ecological transition zones. Here, we used climate- and literature-derived ecological data from tidal saline wetlands to test hypotheses regarding the influence of climatic drivers (i.e., temperature and precipitation regimes) on the following six ecosystem properties: canopy height, biomass, productivity, decomposition, soil carbon density, and soil carbon accumulation. Our analyses quantify and elucidate linear and nonlinear effects of climatic drivers. We quantified positive linear relationships between temperature and above-ground productivity …

You, Me And Life In The Sea Ocg 106g, Joanna Burkhardt

Library Impact Statements

No abstract provided.

Additive Negative Effects Of Anthropogenic Sedimentation And Warming On The Survival Of Coral Recruits, Francesca Fourney, Joana Figueiredo

Marine & Environmental Sciences Faculty Articles

Corals worldwide are facing population declines due to global climate change and local anthropogenic impacts. Global climate change effects are hard to tackle but recent studies show that some coral species can better handle climate change stress when provided with additional energy resources. The local stressor that most undermines energy acquisition is sedimentation because it impedes coral heterotrophic feeding and their ability to photosynthesize. To investigate if reducing local sedimentation will enable corals to better endure ocean warming, we quantitatively assessed the combined effects of increased temperature and sedimentation (concentration and turbidity) on the survival of coral recruits of the …

Gulf Of Mexico Benthic And Planktic Foraminifera Carbon Isotopes, 2015, Patrick Schwing, Jeff Chanton

C-IMAGE data

This dataset consists of benthic and planktic foraminiferal carbon isotope (C-13, C-14) measurements from sediment cores taken throughout the northern Gulf of Mexico with relation to the Deepwater Horizon. Stable isotope measurements were performed on Cibicidoides spp., Uvigerina spp. and Globigerinoides ruber (white).

Cruises R/V Endeavor (En505) And R/V Weatherbird Ii (Wb1205) Gulf Of Mexico Water Chemistry (Spring 2012), Patrick Schwing, Jeff Chanton

C-IMAGE data

This dataset contains water column measurements made onboard the R/V Endeavor and R/V Weatherbird in May 2012 including temperature, salinity, dissolved oxygen, methane concentrations, del13C, and 14C of dissolved inorganic carbon (DIC).

Northern Gulf Of Mexico Benthic And Planktic Foraminifera Taxonomy, 2011-2015, Patrick Schwing

C-IMAGE data

This dataset consists of species-level benthic and planktic foraminiferal assemblages identified from sediment cores taken throughout the northern Gulf of Mexico with relation to the Deepwater Horizon and the Southern Gulf of Mexico in relation to the Ixtoc 1 platform.

Ecosystem Biomonitoring With Edna: Metabarcoding Across The Tree Of Life In A Tropical Marine Environment, Michael Stat, Megan J. Huggett, Rachele Bernasconi, Joseph D. Dibattista, Tina Berry, Stephen J. Newman, Euan S. Harvey, Michael Bunce

Fisheries Research Articles

Effective marine management requires comprehensive data on the status of marine biodiversity. However, efficient methods that can document biodiversity in our oceans are currently lacking. Environmental DNA (eDNA) sourced from seawater offers a new avenue for investigating the biota in marine ecosystems. Here, we investigated the potential of eDNA to inform on the breadth of biodiversity present in a tropical marine environment. Directly sequencing eDNA from seawater using a shotgun approach resulted in only 0.34% of 22.3 million reads assigning to eukaryotes, highlighting the inefficiency of this method for assessing eukaryotic diversity. In contrast, using ‘tree of life’ (ToL) metabarcoding …

Inventory Of Gulf Of Mexico Oceanic Fauna Data Including Species, Weight, And Measurements From R/V Point Sur (Cruises Dp03 And Dp04) May-August, 2016, April Cook, Tracey Sutton

DEEPEND Datasets

This data set includes the biological and environmental data for all of the species collected during the DP03 (May 2016) and DP04 cruises (August 2016). The main gear type used was a 10-m2 Multiple Opening Closing Net and Environmental Sensing System (MOCNESS). The MOCNESS was fitted with 6 nets which were opened according to the following depth scheme: net 0 from the surface to 1500m, net 1 from 1500-1200m, net 2 from 200-1000m, net 3 from 1000-600m, net 4 from 600-200m, and net 5 from 200m to the surface. Two trawls were conducted at each station sampled to capture diel …

Using The Oxford Nanopore Minion (A Portable Dna Sequencer) For Microbial Ecology, Lee Kerkhof

Sustainability Seminar Series

An approach utilizing the MinIon to sequence bacterial ribosomal operons within natural samples has been developed. Bacterial rRNA operons were amplified from 6 samples employing a mixture of farm soil and bioreactor DNA in known concentrations. Replicate extraction/amplifications (n=4) yielded over 10,000 2D sequences which were analyzed using a simplified data analysis pipeline based on NCBI Blast and assembly with Geneious software. The method could detect over 1000 operational taxonomic units in a quantitative manner. An iterative assembly scheme was developed to re- construct those rRNA operons with > 30x coverage from 30 OTUs among the Proteobacteria, Actinobacteria, Acidobacteria, Firmicutes, and …

Review Of Seagrassnet Monitoring Photographs In Great Bay, New Hampshire, Usa 2007 - 2014, Frederick T. Short

PREP Reports & Publications

SeagrassNet is a global monitoring program begun in 2001 and designed to scientifically detect and document seagrass habitat change (Short et al. 2006a, 2014). Monitoring of eelgrass (Zostera marina L.) in the Great Bay Estuary using SeagrassNet was conducted in Portsmouth Harbor between 2001 and 2009 (Short et al 2006b, Rivers and Short 2007), and is ongoing in Great Bay itself, from 2007 (Short 2009) to the present. In this report, July quadrat photos taken along the three Great Bay SeagrassNet transects from 2007 – 2014 are presented and discussed. They provide useful documentation of field percent cover measurements of …

Climate Controls Over The Net Carbon Uptake Period And Amplitude Of Net Ecosystem Production In Temperate And Boreal Ecosystems, Zheng Fu, Paul C. Stoy, Yiqi Luo, Jiquan Chen, Jian Sun, Leonardo Montagnani, Georg Wohlfahrt, Abdullah F. Rahman, Serge Rambal, Christian Bernhofer

School of Earth, Environmental, & Marine Sciences Faculty Publications

Highlights

• The start of net C uptake was determined by spring temperature in DBF and EF.

• Summer precipitation determined NEPmax anomalies in DBF and GRA.

• Climate controls annual NEP variability by regulating CUP and NEPmax.

Abstract

The seasonal and interannual variability of the terrestrial carbon cycle is regulated by the interactions of climate and ecosystem function. However, the key factors and processes determining the interannual variability of net ecosystem productivity (NEP) in different biomes are far from clear. Here, we quantified yearly anomalies of seasonal and annual NEP, net carbon uptake period (CUP), and the maximum daily NEP (NEPmax) …

Understanding The Transition From Benthic Egg To Dispersive Larvae: Observations On The Intra-Capsular Growth And Development Of A Marine Snail (Kelletia Kelletii), Megan N. Wilson

Biological Sciences

It has long been understood that the larval life stage is responsible for the dispersion of many marine organisms across their biogeographic range. Such organisms have a bipartite life cycle, existing in the water column and subject to oceanographic processes as planktonic larvae before settling to suitable habitat along the benthos where they grow and mature. Previous studies have demonstrated that larval growth rate and behavior in the water column can alter larval position in relation to ocean currents and affects their dispersal pathway. However, there is a paucity of information regarding the growth rate of the earliest larval stage …

Non‐Linear Thresholds Characterize The Relationship Between Reef Fishes And Mangrove Habitat, Geoffrey S. Shideler, Rafael J. Araujo, Brian K. Walker, Jeremiah Blondeau, Joseph E. Serafy

Marine & Environmental Sciences Faculty Articles

A significant obstacle to evaluating the importance of mangrove habitat to coral reef fishes has been the difficulty of disentangling its effects from other subtidal/nearshore habitats or human population pressures. Florida's seascape, unlike most others, has been extensively surveyed and mapped, and there are reliable estimates of human population density. Despite many studies that have correlated reef fish abundance with nearby mangrove habitat, some researchers continue to question the importance of mangroves to reef fishes. Previous studies that have investigated the mangrove–reef fish subsidy effect have applied methods that either compared averages or examined linear relationships; yet there is a …

Predicting The Consequence Of Natural And Chemical Dispersion For Oil Slick Size Over Time, Marieke Zeinstra-Helfrich, Wierd Koops, Albertinka Murk

C-IMAGE Publications

Application of dispersants aims to enhance the natural dispersion process in order to reduce the size of the slick and the amount of oil at the surface. This study presents an approach for modeling the development of the surface oil slick as a function of the wind speed, oil viscosity, and dispersant application. We modeled the oil slick mass distribution across a transect through the slick over time taking into account the continuous entrainment of oil, resurfacing process of the different oil droplet size classes and horizontal transport. Outcomes show distinctively different oil slick features, depending on how favorable conditions …

Behavioral Responses To Pulses Of Light In The Longfin Inshore Squid, Doryteuthis Pealeii (Lesueur, 1821), Stavros P. Hadjisolomou

Dissertations, Theses, and Capstone Projects

The coleoid cephalopods (octopus, squid, and cuttlefish) are masters of rapid, adaptive camouflage. Unlike the slower hormonal chromatophore control of flatfish and chameleons, coleoid mollusks can change body patterns in milliseconds. Visual camouflage in coleoids is driven by a sensorimotor system consisting of visual input of their surroundings, a sophisticated central nervous system for information processing, and a neuromuscular control for body patterning. Motor neurons selectively activate millions of muscles, alternately expanding and reducing the pigmented chromatophores to generate visible brown, red, orange and yellow patterns on the skin. Below the chromatophore-layered skin are two types of reflecting cells, iridophores …

Understanding And Optimizing Growth And Development Of California Yellowtail (Seriola Dorsalis) In Aquaculture Using Physiological Tools, Laura Schwebel

Theses

Physical fitness metrics were used to assess the health and development of California Yellowtail, Seriola dorsalis, in an aquaculture environment during two grow-out experiments. The first experiment sought to evaluate the effects of a common aquaculture deformity (an improperly inflated swim bladder) that has been hypothesized to impact energy allocation, growth, and development. Metrics including metabolic rate, critical swimming speed, feed conversion ratio, and growth rate, were monitored over a 32-week period in three groups of California Yellowtail: wild-caught (“wild”), healthy hatchery-reared (“inflated”), and hatchery-reared with uninflated swim bladders (“uninflated”). At the start of the grow-out period, wild fish …

Vertical And Cross-Shore Distributions Of Barnacle Larvae In La Jolla, Ca Nearshore Waters: Implications For Larval Transport Processes, Malloree Lynn Hagerty

Theses

Many marine organisms begin their lives as tiny larvae that are at the mercy of ocean currents. Understanding the transport and subsequent dispersal of larvae is crucial, as it drives population connectivity in the ocean. Larval transport is a complex process involving both physical motions of the water and larval behavior. Vertical positioning is especially important because currents vary throughout the water column, and larvae at different depths will be advected differently. With swimming speeds insufficient to swim against currents, marine larvae can mediate cross-shore transport by controlling their depth distributions. Thus, the overall objective of this study was to …