Genomic Signatures Of Local Adaptation Reveal Source-Sink Dynamics In A High Gene Flow Fish Species,
2017
University of Western Australia
Genomic Signatures Of Local Adaptation Reveal Source-Sink Dynamics In A High Gene Flow Fish Species, Katherine Cure, Luke Thomas, Jean-Paul A. Hobbs, David V. Fairclough, Winn Jason Kennington
Fisheries Research Articles
Understanding source-sink dynamics is important for conservation management, particularly when climatic events alter species’ distributions. Following a 2011 ‘marine heatwave’ in Western Australia, we observed high recruitment of the endemic fisheries target species Choerodon rubescens, towards the cooler (southern) end of its distribution. Here, we use a genome wide set of 14 559 single-nucleotide polymorphisms (SNPs) to identify the likely source population for this recruitment event. Most loci (76%) showed low genetic divergence across the species’ range, indicating high levels of gene flow and confirming previous findings using neutral microsatellite markers. However, a small proportion of loci showed strong …
Impacts Of Coastal Acidification On Louisiana Plankton,
2017
Louisiana State University and Agricultural and Mechanical College
Impacts Of Coastal Acidification On Louisiana Plankton, Amy Mallozzi
LSU Master's Theses
Anthropogenic input of carbon dioxide (CO2) has an increasingly acidifying effect on the world’s oceans with the potential to impact biogeochemical cycles and food web dynamics. Coastal Louisiana is an area highly vulnerable to changing climate, but the unique local water chemistry created by input from the Mississippi and Atchafalaya Rivers makes the manifestation of elevated CO2 and its biological implications difficult to predict. Louisiana estuaries are highly productive and support a large commercial market for the eastern oyster, Crassostrea virginica. This study explores the use of experimental microcosms to expose natural phytoplankton assemblages and larval …
Avoidance Responses Of Minke Whales To 1–4 Khz Naval Sonar,
2017
Norwegian Defence Research Establishment
Avoidance Responses Of Minke Whales To 1–4 Khz Naval Sonar, Petter H. Kvadsheim, Stacy L. Deruiter, Lise D. Sivle, Jeremy A. Goldbogen
University Faculty Publications and Creative Works
Minke whales are difficult to study and little information exists regarding their responses to anthropogenic sound. This study pools data from behavioural response studies off California and Norway. Data are derived from four tagged animals, of which one from each location was exposed to naval sonar signals. Statistical analyses were conducted using Mahalanobis distance to compare overall changes in parameters summarising dive behaviour, avoidance behaviour, and potential energetic costs of disturbance. Our quantitative analysis showed that both animals initiated avoidance behaviour, but responses were not associated with unusual dive behaviour. In one exposed animal the avoidance of the sonar source …
Landsat Based Sargassum Coverage In The Northern Gulf Of Mexico, 2010,
2017
University of South Florida
Landsat Based Sargassum Coverage In The Northern Gulf Of Mexico, 2010, Chuanmin Hu, Lian Feng
C-IMAGE data
This dataset contains the sargassum coverage in the northeastern Gulf of Mexico detected using both Landsat remote sensing images and airborne AVIRIS data. The mean Sargassum coverage during the four quarters of 2010 for the study region are also provided. Dataset results are provided in Excel format and correspond to the the publication: Hu, C.; Hardy, R.; Ruder, E.; Geggel, A.; Feng, L.; Powers, S.; Hernandez, F.; Graettinger, G.; Bodnar, J.; McDonald, T. (2016). Sargassum coverage in the northeastern Gulf of Mexico during 2010 from Landsat and airborne observations: Implications for the Deepwater Horizon oil spill impact assessment. Marine Pollution …
Ecopath With Ecosim Model Of The West Florida Shelf Representing 1980 For Harmful Algal Bloom Simulations,
2017
University of South Florida
Ecopath With Ecosim Model Of The West Florida Shelf Representing 1980 For Harmful Algal Bloom Simulations, Cameron Ainsworth, Alisha Gray
C-IMAGE data
This is an Ecopath with Ecosim model of the West Florida Shelf. It is based on a model constructed by Mahmoudi (unpublished data) (see Okey et al. 2004 for an application) and later modified Gray et al. 2013 to incorporate additional exploited and non-exploited species and life stages known to be sensitive to harmful algal blooms (HABs). To incorporate HABs an additional (pseudo) fishing fleet is added into the model to provide a red tide mortality driver on adult fish and invertebrates. Biomass caught by this fleet is immediately cycled into the detritus pool, and thus nutrients from killed fish …
Anthropogenic Effects On The Fouling Community: Impacts Of Biological Invasions And Anthropogenic Structures On Community Structure,
2017
Portland State University
Anthropogenic Effects On The Fouling Community: Impacts Of Biological Invasions And Anthropogenic Structures On Community Structure, Whitney Elizabeth Mcclees
Dissertations and Theses
Coastal anthropogenic infrastructure has significantly modified nearshore environments. Because these structures often have a strong association with shipping as would be found in ports and harbors, they have been identified as invasion hotspots. Due to propagule pressure from shipping and recreational boating and suitable uncolonized substrate that provides a refuge from native predators, a greater number of non-native species have been found on these structures compared to nearby natural substrate. The mechanisms that limit the spread of non-native species from anthropogenic structures to natural substrate have been explored for several taxa at a species-specific level, but less so from an …
Species Specific Metabolic Capacity Of Naphthalene And Phenanthrene In Three Species Of Marine Teleosts Exposed To Deepwater Horizon Crude Oil,
2017
University of South Florida
Species Specific Metabolic Capacity Of Naphthalene And Phenanthrene In Three Species Of Marine Teleosts Exposed To Deepwater Horizon Crude Oil, Erin Pulster
C-IMAGE data
Select monohydroxylated polycyclic aromatic hydrocarbons (PAHs) metabolites were measured in three marine teleosts, red drum (Sciaenops ocellatus), Florida pompano (Trachinotus carolinus) and southern flounder (Paralichthys lethostigma) to evaluate species specific metabolic differences. Fish were exposed to DWH crude oil by intraperitoneal (i.p.) injections at time 0 and 48 hours with bile sampling events at 24 and 72 hours post injection. Biliary levels of monohydroxylated naphthalene and phenanthrene metabolites were confirmed and quantified using gas chromatography triple quadrapole mass spectrometry.
How Strongly Do Oysters Stick?,
2017
Universidad de Los Andes - Colombia
How Strongly Do Oysters Stick?, Nicolás M. Morato, Andrés M. Tibabuzo, Jonathan J. Wilker
The Summer Undergraduate Research Fellowship (SURF) Symposium
Biological adhesives are a type of interfacial material that has incredible potential to generate new biomimetic compounds that can replace current strong, but toxic, adhesives. Therefore, a study of the chemical composition and mechanical properties of those bio-adhesives is necessary. However, in the case of oysters, despite known chemical characterization of the adult’s adhesive, there are almost no studies on its mechanical properties. Furthermore, there is no available information on the adhesive properties of spat (oysters in their larvae state). Herein, we present the first mechanical characterization of the spat adhesive, measuring its adhesion strength by hydrodynamic determination using a …
The Trophic Role Of A Large Marine Predator, The Tiger Shark Galeocerdo Cuvier,
2017
University of Western Australia - Crawley
The Trophic Role Of A Large Marine Predator, The Tiger Shark Galeocerdo Cuvier, Luciana C. Ferreira, Michele Thums, Michael R. Heithaus, Adam Barnett, Katya G. Abrantes, Bonnie J. Holmes, Lara M. Zamora, Ashley J. Frisch, Julian G. Pepperell, Derek Burkholder, Jeremy Vaudo, Robert Nowicki, Jessica Meeuwig, Mark G. Meekan
Marine & Environmental Sciences Faculty Articles
Tiger sharks were sampled off the western (Ningaloo Reef, Shark Bay) and eastern (the Great Barrier Reef; GBR, Queensland and New South Wales; NSW) coastlines of Australia. Multiple tissues were collected from each shark to investigate the effects of location, size and sex of sharks on δ13C and δ15N stable isotopes among these locations. Isotopic composition of sharks sampled in reef and seagrass habitats (Shark Bay, GBR) reflected seagrass-based food-webs, whereas at Ningaloo Reef analysis revealed a dietary transition between pelagic and seagrass food-webs. In temperate habitats off southern Queensland and NSW coasts, shark diets relied on pelagic food-webs. Tiger …
New Genera And Species Of Fossil Marine Amioid Fishes (Actinopterygii, Holostei) From The Late Cretaceous Agoult Locality In Southeastern Morocco,
2017
University of Alberta
New Genera And Species Of Fossil Marine Amioid Fishes (Actinopterygii, Holostei) From The Late Cretaceous Agoult Locality In Southeastern Morocco, Mark V. Wilson, Alison M. Murray, Terry C. Grande
Biology: Faculty Publications and Other Works
The document is Terry C. Grande's (et al.) abstract in the Society of Vertebrate Paleontology 77th Annual Meeting Program and Abstracts.
A Global Biogeographic Classification Of The Mesopelagic Zone,
2017
Nova Southeastern University
A Global Biogeographic Classification Of The Mesopelagic Zone, Tracey Sutton, Malcolm R. Clark, Daniel C. Dunn, Patrick N. Halpin, Alex D. Rogers, John Guinotte, Steven J. Bograd, Martin V. Angel, Jose Angel A. Perez, Karen Wishner, Richard L. Haedrich, Dhugal Lindsay, Jeffrey C. Drazen, Alexander Vereshchaka, Uwe Piatkowski, Telmo Morato, Katarzyna Blachowiak-Samolyk, Bruce H. Robison, Kristina Gjerde, Annelies Pierrot-Bults, Patricio Bernal, Gabriel Reygondeau, Mikko Heino
Marine & Environmental Sciences Faculty Articles
We have developed a global biogeographic classification of the mesopelagic zone to reflect the regional scales over which the ocean interior varies in terms of biodiversity and function. An integrated approach was necessary, as global gaps in information and variable sampling methods preclude strictly statistical approaches. A panel combining expertise in oceanography, geospatial mapping, and deep-sea biology convened to collate expert opinion on the distributional patterns of pelagic fauna relative to environmental proxies (temperature, salinity, and dissolved oxygen at mesopelagic depths). An iterative Delphi Method integrating additional biological and physical data was used to classify biogeographic ecoregions and to identify …
Dna Analysis Of Traded Shark Fins And Mobulid Gill Plates Reveals A High Proportion Of Species Of Conservation Concern,
2017
University of Guelph - Canada
Dna Analysis Of Traded Shark Fins And Mobulid Gill Plates Reveals A High Proportion Of Species Of Conservation Concern, Dirk Steinke, Andrea Bernard, Rebekah L. Horn, Paul Hilton, Robert H. Hanner, Mahmood S. Shivji
Marine & Environmental Sciences Faculty Articles
Continuously increasing demand for plant and animal products causes unsustainable depletion of biological resources. It is estimated that one-quarter of sharks and rays are threatened worldwide and although the global fin trade is widely recognized as a major driver, demand for meat, liver oil, and gill plates also represents a significant threat. This study used DNA barcoding and 16 S rRNA sequencing as a method to identify shark and ray species from dried fins and gill plates, obtained in Canada, China, and Sri Lanka. 129 fins and gill plates were analysed and searches on BOLD produced matches to 20 species …
Population Density, Distribution, Richness & Health Of Shallow Water Caribbean Porifera From An Unesco Biosphere Reserve, St. John, Usvi,
2017
Montclair State University
Population Density, Distribution, Richness & Health Of Shallow Water Caribbean Porifera From An Unesco Biosphere Reserve, St. John, Usvi, Patrick Michael Vojnyk
Theses, Dissertations and Culminating Projects
Porifera is an important phylum of organisms in benthic ecosystems that filter water, act as biogenic habitat, and provide 3-dimentional structure. Sponge diversity and abundance are often used as bio-indicators for good or improving water quality in a system. Transects were performed during July 2015, January 2016, and July 2016 to determine species richness, density, and assess necrotic pinacoderm tissue decay of species of poriferans in St. John, USVI. 6,800 individuals and 17 different species were recorded during observation periods in Great and Little Lameshur Bays. Results indicate that the non-cryptic species Amphimedon compressa and Aplysina fiulva had the highest …
Egg Quality Traits And Predictors Of Embryo And Fry Viability In Red Snapper Lutjanus Campechanus,
2017
University of Southern Mississippi
Egg Quality Traits And Predictors Of Embryo And Fry Viability In Red Snapper Lutjanus Campechanus, Agnés Bardon-Albaret, Eric Saillant
Faculty Publications
The quality of red snapper eggs is highly variable and unpredictable in aquaculture, leading to high mortality during early larval rearing. In this work, the viability of red snapper eggs was monitored from fertilization until unfed larvae expired because of exhaustion of vitelline reserves to determine egg quality traits in this species. The spawns were obtained via strip spawning wild-caught females following hormonal induction with chorionic gonadotropin. Females were induced immediately after capture (wild group, n = 17) or held captive for the entire maturation period prior to induction (captive group, n = 7). Candidate predictors of egg quality measured …
Distribution And Potential Impact Of Microplastics In The Ribbed Marsh Mussel Geukensia Demissa,
2017
Montclair State University
Distribution And Potential Impact Of Microplastics In The Ribbed Marsh Mussel Geukensia Demissa, Matthew Byron Khan
Theses, Dissertations and Culminating Projects
Human activities have generated large quantities of plastics that are actively dumped or indirectly deposited into oceans. In particular, the use of single-use packaging and microplastics in cosmetics and manufacturing has led to significant increases of these contaminants in coastal waters. These plastics, because of their size, can be ingested by filter-, suspension-, and deposit-feeding organisms who coincidentally consume them as potential food sources. As a result, organisms may experience marked reductions in growth and/or health due to the accumulation of these plastics in their digestive tracts. While research has concentrated on the commercially harvested blue mussel Mytilus edulis, none …
Catalase Is A Determinant Of The Colonization And Transovarial Transmission Of Rickettsia Parkeri In The Gulf Coast Tick Amblyomma Maculatum,
2017
University of Southern Mississippi
Catalase Is A Determinant Of The Colonization And Transovarial Transmission Of Rickettsia Parkeri In The Gulf Coast Tick Amblyomma Maculatum, Khemraj Budachetri, Deepak Kumar, Shahid Karim
Faculty Publications
The Gulf Coast tick (Amblyomma maculatum) has evolved as a competent vector of the spotted‐fever group rickettsia, Rickettsia parkeri. In this study, the functional role of catalase, an enzyme responsible for the degradation of toxic hydrogen peroxide, in the colonization of the tick vector by R. parkeri and transovarial transmission of this pathogen to the next tick generation, was investigated. Catalase gene (CAT) expression in midgut, salivary glands and ovarian tissues exhibited a 2–11‐fold increase in transcription level upon R. parkeri infection. Depletion of CAT transcripts using an RNA‐interference approach significantly reduced R. parkeri infection …
Evidence Of Multidecadal Recruitment In The Ocean Quahog, Arctica Islandica In The Western Atlantic Ocean,
2017
University of Southern Mississippi
Evidence Of Multidecadal Recruitment In The Ocean Quahog, Arctica Islandica In The Western Atlantic Ocean, Sara M. Pace
Master's Theses
Ocean quahogs (Arctica islandica) are the longest-lived, non-colonial animals known today, with a maximum life span exceeding 500 years. Limited information is available regarding recruitment, making the sustainable management of this valuable fishery a challenge. The objective of this research was to describe the age structure and growth rates for four populations of ocean quahogs from the mid-Atlantic stock to evaluate long-term recruitment trends. Clams were sectioned for age estimation to develop population age frequencies. Initial colonization began approximately 175-250 years ago depending upon site. All sites experienced an increase in recruitment beginning in the late 1800’s to …
Impact Of Salinity Change On Water Quality Variables From The Sediment Of An Artificial Lake Under Anaerobic Conditions,
2017
The University of Texas Rio Grande Valley
Impact Of Salinity Change On Water Quality Variables From The Sediment Of An Artificial Lake Under Anaerobic Conditions, Tae-Hoon Kim, James Jihoon Kang, Sang Hyun Kim, I-Song Choi, Kwang-Hyeon Chang, Jong Min Oh, Ki-Hyun Kim
School of Earth, Environmental, & Marine Sciences Faculty Publications
Artificial reservoirs are created by dike construction in coastal areas to secure the agricultural water supply on the west coast of South Korea. These systems are found to retain brackish characteristics until total desalination is achieved. To evaluate the effects of salinity on the organic substances released from the sediment, a laboratory water-sediment column experiment was conducted to assess associated changes in water quality variables such as the sediment oxygen demand (SOD), chemical oxygen demand (COD), and concentrations of nitrogen (N) and phosphorus (P). Under high salinity conditions, the release of N from the sediment was promoted with the enhancement …
Dna Analysis Of Surfactant-Associated Bacteria In A Natural Sea Slick In The Gulf Of Mexico Observed By Terrasar-X,
2017
Nova Southeastern University
Dna Analysis Of Surfactant-Associated Bacteria In A Natural Sea Slick In The Gulf Of Mexico Observed By Terrasar-X, Kathryn Howe
HCNSO Student Theses and Dissertations
Under low wind speed conditions, surfactants accumulate at the air-sea interface, dampen short-gravity capillary (Bragg) waves, and form natural sea slicks that are detectable visually and in synthetic aperture radar (SAR) imagery. Marine organisms, such as phytoplankton, zooplankton, seaweed, and bacteria, produce and degrade surfactants during various life processes. This study coordinates in situ sampling with TerraSAR-X satellite overpasses in order to help guide microbiological analysis of the sea surface microlayer (SML) and associated subsurface water (SSW). Samples were collected in the Gulf of Mexico during a research cruise (LASER) in February 2016 to determine abundance of surfactant associated bacteria …
Synergistic Use Of Remote Sensing And Modeling To Assess An Anomalously High Chlorophyll-A Event During Summer 2015 In The South Central Red Sea,
2017
Chapman University
Synergistic Use Of Remote Sensing And Modeling To Assess An Anomalously High Chlorophyll-A Event During Summer 2015 In The South Central Red Sea, Wenzhao Li, Hesham El-Askary, K. P. Manikandan, Mohamed A. Qurban, Michael J. Garay, Olga V. Kalishnikova
Mathematics, Physics, and Computer Science Faculty Articles and Research
An anomalously high chlorophyll-a (Chl-a) event (>2 mg/m3) during June 2015 in the South Central Red Sea (17.5° to 22°N, 37° to 42°E) was observed using Moderate Resolution Imaging Spectroradiometer (MODIS) data from the Terra and Aqua satellite platforms. This differs from the low Chl-a values (<0.5 mg/m3) usually encountered over the same region during summertime. To assess this anomaly and possible causes, we used a wide range of oceanographical and meteorological datasets, including Chl-a concentrations, sea surface temperature (SST), sea surface height (SSH), mixed layer depth (MLD), ocean current velocity and aerosol optical depth (AOD) obtained from different sensors and models. Findings confirmed this anomalous behavior in the spatial domain using Hovmöller data analysis techniques, while a time series analysis addressed monthly and daily variability. Our analysis suggests that a combination of factors controlling nutrient supply contributed to the anomalous phytoplankton growth. These factors include horizontal transfer of upwelling water through eddy circulation and possible mineral fertilization from atmospheric dust deposition. Coral reefs might have provided extra nutrient supply, yet this is out of the scope of our analysis. We thought that dust deposition from a coastal dust jet event in late June, coinciding with the phytoplankton blooms in the area under investigation, might have also contributed as shown by our AOD findings. However, a lag cross correlation showed a two- month lag between strong dust outbreak and the high Chl-a anomaly. The high Chl-a concentration at the edge of the eddy emphasizes the importance of horizontal advection in fertilizing oligotrophic (nutrient poor) Red Sea waters.
