Biodiversity Commons^™

Recurrent Evolution Of Melanism In South American Felids, Alexsandra Schneider, Corneliu Henegar, Kenneth Day, Devin Absher, Constanza Napolitano, Leandro Silveira, Victor A. David, Stephen J. O'Brien, Marilyn Menotti-Raymond, Gregory S. Barsh, Eduardo Eizirik

Biology Faculty Articles

Morphological variation in natural populations is a genomic test bed for studying the interface between molecular evolution and population genetics, but some of the most interesting questions involve non-model organisms that lack well annotated reference genomes. Many felid species exhibit polymorphism for melanism but the relative roles played by genetic drift, natural selection, and interspecies hybridization remain uncertain. We identify mutations of Agouti signaling protein (ASIP) or the Melanocortin 1 receptor (MC1R) as independent causes of melanism in three closely related South American species: the pampas cat (Leopardus colocolo), the kodkod (Leopardus guigna), and Geoffroy’s cat …

Agenda: Seeds Of Change: Responding To Global Change In A Bottom-Up World, University Of Colorado Boulder. Getches-Wilkinson Center For Natural Resources, Energy, And The Environment, University Of Colorado Boulder. School Of Law, Posner Center For International Development, Resolve (Firm), Newmont Mining Corporation

Seeds of Change: Responding to Global Change in a Bottom-Up World (Martz Winter Symposium, February 12-13)

Sponsors: Posner Center for International Development, RESOLVE, Inc., Newmont Mining Corporation, and Getches-Wilkinson Center for Natural Resources, Energy, and the Environment.

Conference moderators, panelists and speakers included University of Colorado Law School professors Phil Weiser, Sarah Krakoff, Britt Banks, and Lakshman Guruswamy.

This conference is made possible through the generous support of donors who sponsored this year’s Martz Sustainability Symposium (including Newmont Mining Corporation) and those who have invested in our Clyde O. Martz Endowed Fund for Natural Resources Management (including Brian Dolan and Davis Graham and Stubbs LLP). The Martz Natural Resources Management Fund was established in the memory …

On The Analysis Of Phylogenetically Paired Designs, Jennifer L. Funk, Cyril Rakovski, J. Michael Macpherson

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

As phylogenetically controlled experimental designs become increasingly common in ecology, the need arises for a standardized statistical treatment of these datasets. Phylogenetically paired designs circumvent the need for resolved phylogenies and have been used to compare species groups, particularly in the areas of invasion biology and adaptation. Despite the widespread use of this approach, the statistical analysis of paired designs has not been critically evaluated. We propose a mixed model approach that includes random effects for pair and species. These random effects introduce a “two-layer” compound symmetry variance structure that captures both the correlations between observations on related species within …

Fishes Of The Choctawhatchee River System In Southeastern Alabama And Northcentral Florida, Thomas P. Simon, Charles C. Morris, Bernard R. Kuhajda, Carter R. Gilbert, Henry L. Bart Jr., Nelson Rios, Paul M. Stewart, Thomas P. Simon Iv, Mitt Denney

Southeastern Fishes Council Proceedings

The diversity and distribution of fish species occurring in the Choctawhatchee River drainage in southeastern Alabama and northcentral Florida were surveyed to obtain historical baseline information. Three hundred seventy-four sites were evaluated for species diversity and distribution in the drainage, including compilation of unpublished records from southeastern natural history museums. The greatest diversity at any single site was 37 species. Sixty-eight sites were represented by 15 species or more, and 26 sites were represented by a single species. The most frequently encountered species includes Gambusia holbrooki, Percina nigrofasciata, Esox americanus, Notropis texanus, Lepomis macrochirus, Cyprinella n. sp. cf venusta, …

Lineage Sorting In Multihost Parasites: Eidmanniella Albescens And Fregatiella Aurifasciata On Seabirds From The Galapagos Islands, Jose Rivera-Parra, Iris Levin, Kevin Johnson, Patricia Parker

Biology Department Faculty Works

Parasites comprise a significant percentage of the biodiversity of the planet and are useful systems to test evolutionary and ecological hypotheses. In this study, we analyze the effect of host species identity and the immediate local species assemblage within mixed species colonies of nesting seabirds on patterns of genetic clustering within two species of multihost ectoparasitic lice. We use three genetic markers (one mitochondrial, COI, and two nuclear, EF1‐α and wingless) and maximum likelihood phylogenetic trees to test whether (1) parasites show lineage sorting based on their host species; and (2) switching of lineages to the alternate host species depends …

A Comparison Of Survey Methods For Documenting Presence Of Myotis Leibii (Eastern Small-Footed Bats) At Roosting Areas In Western Virginia, John K. Huth, Alexander Silvis, Paul R. Moosman Jr., W. Mark Ford, Sara Sweeten

Virginia Journal of Science

Many aspects of foraging and roosting habitat of Myotis leibii (Eastern Small-Footed Bat), an emergent rock roosting-obligate, are poorly described. Previous comparisons of effectiveness of acoustic sampling and mist-net captures have not included Eastern Small-Footed Bat. Habitat requirements of this species differ from congeners in the region, and it is unclear whether survey protocols developed for other species are applicable. Using data from three overlapping studies at two sampling sites in western Virginia’s central Appalachian Mountains, detection probabilities were examined for three survey methods (acoustic surveys with automated identification of calls, visual searches of rock crevices, and mist-netting) for use …

Sampling Considerations For Amphibian Surveys: Evaluating Risks Of Committing Type I And Type Ii Errors, Kelli Marie Herrick

Theses, Dissertations and Capstones

Global amphibian declines pose a major threat to the world’s biodiversity. We examined the observation bias associated with volunteer based anuran surveys, such as the North American Amphibian Monitoring Protocol (NAAMP). We followed NAAMP protocol to examine if variation in the persons (1-3) in an observer unit affected observer error. We hypothesized that observation units with multiple observers have less observer bias and would better report anuran assemblages compared to single observers. Larger observer units had fewer incidences of false positive observations. Additionally, we attempted to determine which sampling method for the eastern hellbender (Cryptobranchus a. alleganiensis) had the highest …

Tree Inventory Analysis: A Comparison Of Park Species Richness To The Surrounding Neighborhoods In Rock Island, Illinois, Kevin Root

Urban Forest Project

Urban forests (parks, right-of-way trees, yards, and remnant woodlots and semi-natural areas) are critical sources such diversity in urban areas. Diversity of urban forest is often related to the socioeconomic status, housing age, and elevation of the neighborhood. With the invasion of the Emerald Ash Borer (EAB) in the last decade, conserving and enhancing the diversity of urban forests has become an important tool in increasing the resilience of such ecosystems to such devastating invasion. We assessed the diversity and composition of the forests of 17 parks in Rock Island, Illinois and examined the relationship between such diversity and the …

Global Information Systems Analysis Of Changes In Temporal Flowers Distribution, By Species, Across The Biology Trail System Of Southern Adventist University In Collegedale, Tennessee, Lien Turley

Capstone Research Projects

The White Oak Mountain Biology Trails, located in Collegedale, Tennessee, is a recreational site for hiking and mountain biking. The impact of trail usage on native wildflower species is not known. The goal of this research is to begin a longitudinal study of the impact of trail usage on the diversity and abundance of wildflower. The wildflowers diversity were determined by students walking the Biology Trails System and reporting the different species of flowers that they see. Ten permanent quadrants were established to document the wildflowers abundance. Flowers in each of ten permanent quadrants were identified and counted. Additional data …

White-Tailed Deer (Odocoileus Virginianus) Fawn Risk From Gray Wolf (Canis Lupus) Predation During Summer, L. David Mech, Aaron Morris, Shannon M. Barber-Meyer

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

Little is known about how often various prey animals are at risk of predation by Gray Wolves (Canis lupus). We used a system to monitor the presence during the day of two radio-collared Gray Wolves within 2 km of a radio-collared White-tailed Deer (Odocoileus virginianus) with a fawn or fawns in August 2013 in the Superior National Forest of northeastern Minnesota. We concluded that the fawn or fawns were at risk of predation by at least one wolf at least daily.

Navigating A Pathway Toward Colorado's Water Future: A Review And Recommendations On Colorado's Draft Water Plan, Lawrence J. Macdonnell, Colorado Water Working Group

Books, Reports, and Studies

40 pages (includes color illustrations).

Likelihood Of Marine Pest Introduction To The Indian Ocean Territories, Justin I. Mcdonald, Samantha D. Bridgwood, Mathew Hourston

Fisheries Research Reports

The introduction of new species to environments in which they did not evolve has been widely recognised as one of the top five threats to marine ecosystem function and to biodiversity (Millennium Ecosystem Assessment, 2005).

2015 Academic Program Review School Of Natural Resources University Of Nebraska–Lincoln

School of Natural Resources: Documents and Reviews

No abstract provided.

Riqueza De Helmintos Parásitos De Vertebrados Silvestres Del Estado De Hidalgo, México, Jorge Falcón-Ordaz, Scott Monks, Griselda Pulido-Flores, Luis García-Prieto, Georgina Lira-Guerrero

Estudios en Biodiversidad

La diversidad de helmintos parásitos de vertebrados del estado de Hidalgo, en México es poco conocida, a pesar de que su estudio se inició desde 1937. Asimismo, mucha de la información generada se ha publicado de manera dispersa, lo que dificulta aún más el establecer con precisión los valores actuales. Por ello, el objetivo de este trabajo fue determinar la riqueza de la fauna helmintológica asociada a vertebrados silvestres de Hidalgo. Para alcanzar dicho objetivo, se realizaron tres acciones: 1) recopilación bibliográfica retrospectiva de información; 2) consulta al acervo de diversas colecciones científicas nacionales e internacionales, e 3) incorporación de …

Calidad Del Agua En La Subcuenca Fluvial La Garita, Acapulco, Guerrero Por Monitoreo Con Insectos, Ana Yolanda Rosas-Acevedo, Audel Sánchez-Infante, José Luis Rosas-Acevedo

Estudios en Biodiversidad

La subcuenca La Garita (Región Hidrológica: Rh19Ac) ha sufrido la influencia del hombre, presenta escorrentía y momentos de estiaje, además de puntos aislados de contaminación por basura y descargas. Se realizó un monitoreo de insectos. Se exploró la posibilidad del uso del índice BMWP (Biological Monitoring Working Party), para arroyos y ríos, en la determinación de la calidad del agua y del ecosistema. En la parte alta o cabecera (BMWP=122) correspondió a excelente (ecosistema no impactado), en la zona media o de transferencia (BMWP-CR=118) fue buena (ecosistema no alterado de manera sensible) y en la parte baja o zona de …

Problemática De Contaminación En La Zona Agrícola De La Reserva De La Biosfera Barranca De Metztitlán, Hidalgo, México, Maritza López-Herrera, Leticia Romero-Bautista, Nahara Ayala-Sánchez, Irma E. Soria-Mercado, Amelia Portillo-López

Estudios en Biodiversidad

El presente trabajo se generó con el objetivo de dar a conocer la problemática que existe actualmente en una zona agrícola de gran importancia en el estado de Hidalgo, la “Vega de Metztitlán”, zona que forma parte de la Reserva de la Biosfera Barranca de Metztitlán, sitio declarado como reserva federal. El aporte de agua residual que se hace a través de los acuíferos que irrigan a la zona, ha generado que este sitio se vea expuesto a un gran riesgo de contaminación por metales pesados, hidrocarburos y demás contaminantes, los cuáles quedan biodisponibles para las plantas e indirectamente existe …

Los Hongos Poliporoides De La Subcuenca Del Río Metztitlán, Hidalgo, México, Leticia Romero-Bautista, Miguel Ángel Islas-Santillán, Maritza López-Herrera, Nahara Ayala-Sánchez, Irma Estela Soria-Mercado, Amelia Portillo-López, Tania Raymundo-Ojeda, Ricardo Valenzuela-Garza

Estudios en Biodiversidad

Los hongos poliporoides son excelentes descomponedores de la madera, aunque también hay ectomicorrizógenos; su importancia ecológica radica en que ayudan a mantener el equilibrio del ciclo del carbono en la naturaleza. Además presentan potencial biotecnológico dadas sus características nutrimentales, medicinales y degradadoras, por su capacidad de producir metabolitos secundarios y ser potencialmente cultivables. Se analiza la importancia del impacto ambiental en los ecosistemas de la subcuenca del río Metztitlán y la diversidad de este grupo de hongos asociados a ellos. Se revisaron ejemplares de herbario y se realizaron exploraciones micológicas en 13 comunidades vegetales de 11 municipios, y 37 localidades …

Estudios En Biodiversidad, Volumen I: Presentación, Contribuciones, Y Contribuidores

Estudios en Biodiversidad

No abstract provided.

Indicadores Bióticos De Calidad Ambiental Del Sur Del Estado De Tamaulipas, México. Caso De Estudio: Aves, René Bernardo Elías Cabrera-Cruz, Marco Antonio González-González, Julio César Rolón-Aguilar, Juan Carlos Gaytán-Oyarzún

Estudios en Biodiversidad

Este trabajo plantea una evaluación de prioridad biológica para la conservación de aves en la región sur de Tamaulipas, México. La metodología empleada fue la técnica Evaluación Rápida de Prioridad Biológica (ERPBIO). Esta permite determinar las principales zonas y grupos a conservar en flora y fauna para amplias zonas de estudio de manera rápida y precisa. La región sur de Tamaulipas comprende los municipios de Aldama, Altamira, Ciudad Madero, González y Tampico, con una superficie total de 8,969.05 km2. Dentro de los resultados obtenidos se elaboró una base de datos por municipio, encontrando una amplia cantidad de estudios con un …

La Biodiversidad De Los Hongos Ectomicorrízicos Y Su Importancia Para La Conservación Del Bosque En La Zona Poblana Del Parque Nacional Malintzi, Marco Antonio Marín-Castro, Virginia Silva-Díaz, Gladys Linares-Fleites, Ana María Castagnino, José Antonio Ticante-Roldán

Estudios en Biodiversidad

El Parque Nacional Malintzi comprende una superficie de 45,852 hectáreas, de las cuales corresponden 14,544 al estado de Puebla. El deterioro a su riqueza forestal tiene sus inicios desde la época colonial y hasta nuestros días la presión sobre los recursos de este parque nacional aumenta debido a que los pobladores de la zona, tradicionalmente ven en la montaña su fuente de sustento mediante la agricultura y la extracción de madera, que aunadas a la tala clandestina inmoderada, han influido drásticamente en la pérdida de biodiversidad y cambio de uso del suelo. Los objetivos de este trabajo fueron describir la …