Biodiversity Commons^™

Red Snapper Distribution On Natural Habitats And Artificial Structures In The Northern Gulf Of Mexico, Mandy Karnauskas, John F. Walter Iii, Matthew D. Campbell, Adam G. Pollack, J. Marcus Drymon, Sean P. Powers

University Faculty and Staff Publications

In 2011, an intensive, multiple-gear, fishery-independent survey was carried out in the northern Gulf of Mexico (GOM) to collect comprehensive age and length information on Red Snapper Lutjanus campechanus. Based on this synoptic survey, we produced a spatial map of Red Snapper relative abundance that integrates both gear selectivity effects and ontogenetically varying habitat usage. Our methodology generated a spatial map of Red Snapper at a 10-km2 grid resolution that is consistent with existing knowledge of the species: Red Snapper occurred in relatively high abundances at depths of 50–90 m along the coasts of Texas and Louisiana and in smaller, …

Pseudopecoelus Mccauleyi N. Sp. And Podocotyle Sp. (Digenea: Opecoelidae) From The Deep Waters Off Oregon And British Columbia With An Updated Key To The Species Of Pseudopecoelus Von Wicklen, 1946 And Checklist Of Parasites From Lycodes Cortezianus (Perciformes: Zoarcidae), Charles K. Blend, Norman O. Dronen, Gábor R. Rácz, Scott Lyell Gardner

Scott L. Gardner Publications

Pseudopecoelus mccauleyi n. sp. (Opecoelidae: Opecoelinae) is described from the intestine of the bigfin eelpout, Lycodes cortezianus (Gilbert, 1890) (Perciformes: Zoarcidae), collected at 200–800 m depths in the northeastern Pacific Ocean off Oregon and Vancouver Island, British Columbia. The new species is distinguished by possessing a unique combination of the following diagnostic characters: vitelline fields that extend to the posterior margin of the ventral sucker; a slender, tubular and sinuous seminal vesicle that extends some distance into the hindbody; an unspecialized, protuberant ventral sucker; a genital pore at pharynx level; lobed to deeply multilobed testes; a lobed ovary; and an …

A New Species Of Catenotaenia (Cestoda: Catenotaeniidae) From Pygeretmus Pumilio Kerr, 1792 From The Gobi Of Mongolia, Altangerel Tsogtsaikhan Dursahinhan, Batsaikhan Nyamsuren, Danielle Marie Tufts, Scott Lyell Gardner

Scott L. Gardner Publications

From 1999 through 2012, a total of 541 individual rodents (jerboas of the family Dipodidae) were collected from several habitat types, primarily from the Gobi region of Mongolia, and were examined for helminth and protistan parasites. Of those rodents, 25 were identified as Pygeretmus pumilio Kerr, 1792 (Rodentia: Dipodidae), whereas 516 were other species of jerboa from the provinces of Dornogobi, Dundgobi, Omnogobi, Ovorhangai, Bayanhongor, Gobi Altai, and Hovd. During our field work, we collected several cestodes; some of which represented undescribed species, and these new species occurred in 40% of P. pumilio from four separate collecting localities. We designate …

A Serosurvey Of Diseases Of Free-Ranging Gray Wolves (Canis Lupus) In Minnesota, Usa, Michelle Carstensen, John H. Giudice, Erik C. Hildebrand, J. P. Dubey, John Erb, Dan Stark, John Hart, Shannon M. Barber-Meyer, L. David Mech, Steve K. Windels, Andrew J. Edwards

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

We tested serum samples from 387 free-ranging wolves (Canis lupus) from 2007 to 2013 for exposure to eight canid pathogens to establish baseline data on disease prevalence and spatial distribution in Minnesota’s wolf population. We found high exposure to canine adenoviruses 1 and 2 (88% adults, 45% pups), canine parvovirus (82% adults, 24% pups), and Lyme disease (76% adults, 39% pups). Sixty-six percent of adults and 36% of pups exhibited exposure to the protozoan parasite Neospora caninum. Exposure to arboviruses was confirmed, including West Nile virus (37% adults, 18% pups) and eastern equine encephalitis (3% adults). Exposure rates …

Antifungal Genome Mining And Genetics In Filamentous Actinomycete Bacteria Isolated From Local Soils, Jacob Alex, Kevin Lou, Bilal Makhdoom

Undergraduate Research Symposium Posters

Actinomycetes are gram positive, filamentous bacteria that produce useful antibiotics, antitumor agents, and agricultural products. A series of enrichments were undertaken to isolate actinomycetes from local soils, varying enrichment media, antibacterials, and soil treatments (including heat and CaCO3). Isolates were characterized by 16S rDNA sequencing, phenotypic and morphological observations, and antibiotic production. The genetic tractability of select isolates was analyzed using a panel of integrating vectors derived from ɸC31, ɸBT1, and OzzyJ phage using intergeneric conjugation. Further, a semi-degenerate multiplex PCR assay to detect ɸBT1 genomic integrants was designed and tested for the first time. Finally, PCR screens were used …

¬Multilocus Phylogeny Of The Lichen Family Megasporaceae, Tim B. Wheeler

Graduate Student Theses, Dissertations, & Professional Papers

The lichen symbiosis is one of the oldest studied mutualisms; in fact, Frank and De Bary coined the term "symbiosis" while studying lichens (Frank, 1877; De Bary 1879). The widespread, stable association between the mycobiont and photobiont in lichens offers an ideal system for the study of co-evolution. The recent application of molecular data to lichens has begun to unveil the complexities involved in these associations (Upreti et al. 2015, Spribille et al. 2016). Lichenized fungi make up a huge fraction of fungal diversity (Nash 2008), yet very little is known of their genetic diversity. Fungal taxonomy is notoriously difficult …

Response Of Amphibian And Invertebrate Communities To Wetland Mitigation In The Greater Yellowstone Ecosystem, Leah K. Swartz

Graduate Student Theses, Dissertations, & Professional Papers

Wetlands play a critical role in supporting freshwater biodiversity and ecosystem services, but human activities have resulted in large-scale loss and degradation of these habitats across the globe. To offset the decline of wetland area, mitigation wetlands are now frequently constructed, but their ability to replace the functions of natural habitats, including providing habitat for native fauna, remains uncertain. A recent highway reconstruction project in northwestern Wyoming caused impacts to and the destruction of multiple natural wetlands. To mitigate this loss, new wetlands were constructed along the highway corridor. To evaluate the performance of these created wetlands relative to reference …

The Bee Fauna Of The Horse Mountain And Grouse Mountain Region, Humboldt County, California, Carrie Lopez

Cal Poly Humboldt theses and projects

Recent concerns about the ecological well-being of bee communities in California and elsewhere have increased the need for monitoring programs and studies that evaluate the impact of habitat loss and alteration on bee diversity and abundance. Such studies depend critically on the expertise of people trained in taxonomy, but their numbers have declined in recent years. My primary goal was to gain a comprehensive first-hand experience with bee identification by documenting the fauna of a previously unstudied area in the mountains of northwestern California and by writing an identification key, intended for dedicated non-specialists, to the area’s 35 species of …

Neutral And Adaptive Genetic Variation In North American Hardwood Tree Species, Sudhir Khodwekar

Dissertations, Master's Theses and Master's Reports

'Northern Hardwoods,’ are a characteristic composition of multiple tree species and a part of the rich and diverse northeastern forests. Hardwoods e.g. oaks (Quercus: Fagaceae and Sugar maple), serve as foundation species and offer ecological and economical gains to wildlife and humans. Most of the forest trees go through many biotic and abiotic stresses, for example climate change in their long life span. To overcome these threats and to adapt to changing conditions, tree species need to maintain variation especially in adaptive genes. Therefore, it is necessary to analyze genetic diversity within forest tree populations and take appropriate …

Public Perception Of Environmental Programs In The Sierra Gorda Biosphere Reserve, Landa De Matamoros, Queretaro, Mexico, Danielle Marie Salisbury

Bard Center for Environmental Policy

Biological or ecological corridors have recently been sought out as a solution to biodiversity loss due to habitat fragmentation. In eastern Mexico, the Mexican and German governments are collaborating to connect fragmented landscapes and Natural Protected Areas (NPAs) over five states across a Madrean Pine-Oak biodiversity hotspot through the implementation of the Ecological Corridor of the Sierra Madre Oriental (CESMO). One of the ways the CESMO is accomplishing its conservation goals is by extending environmental programs that are currently in place within NPAs to other areas within the corridor, but outside of NPA borders. However, the success of the corridor …

Daily Distance Moved And Home Range Analysis Of Female Cheetahs On Namibia's Commercial Farmland, Elisabeth Nicole Wise

Honors Theses and Capstones

Fewer then 10,000 cheetahs remain in Sub-Saharan Africa. Namibia has the largest population, estimated to be 4,000. Habitat fragmentation and prey depletion from human expansion for agriculture has pushed 90% of cheetahs to reside on commercial farmland where there is an absence of larger predators. Radio telemetry was used to investigate the seasonal variation in home range size among nine female cheetahs on commercial farmlands on or near the Cheetah Conservation Fund in Otjiwarongo, Namibia. ArcGIS 10.3 and Geospatial Modeling Environment were used to calculate the overall and core home range size. This was estimated for the overall, annual, monthly, …

Influence Of Topography And Moisture And Nutrient Availability On Green Alder Function On The Low Arctic Tundra, Nt, Katherine Louise Black Ms., Jennifer Lynn Baltzer Dr.

Theses and Dissertations (Comprehensive)

The Arctic has warmed by at least 3^°C over the past 50 years and this rapid warming is expected to continue. Climate warming is driving the proliferation of shrubs across the tundra biome with implications for energy balance, climate, hydrology, nutrient cycling, and biodiversity. Changes in tundra plant water use attributable to shrub expansion are predicted to increase evapotranspirative water loss which may amplify local warming and reduce run-off. However, little is known about the extent to which shrubs will enhance evapotranspirative water loss in these systems. Direct measures of shrub water use are needed to accurately predict …

Diversity And Evolution Of Fruits In Cuscuta (Dodders; Convolvulaceae), Anna Ho

Theses and Dissertations (Comprehensive)

Cuscuta (dodder) is a genus of roughly 200 species of obligate stem parasites with sub-cosmopolitan distribution. The fruit, generally regarded as a capsule, has a thin pericarp containing one to four seeds and opening at the base (circumscissile dehiscence; DE), or remaining closed (indehiscent; IN). IN has evolved multiple times in Cuscuta from DE, and is most common in the North American clades of subgenus Grammica. In addition, some species produce fruits that open irregularly. Characteristics pertaining to the fruits of Cuscuta are important as their seeds contribute most to their distribution and prevalence across the globe, and their reduced …

Recent Diatoms Reported From The Central United States: Register Of Taxa And Synonyms, Mark E. Eberle

Biological Sciences Faculty Publications

This list of diatoms summarizes information for more than 1000 taxa and synonyms reported in published accounts of collections made in the central United States, principally within the states of Kansas, Nebraska, and Oklahoma, but also including adjacent areas in eastern Colorado and western Missouri. The objective was to provide people working on diatom projects in this region with a base reference to help them assess the results of their research. Records from Master’s theses and references focused on fossil diatoms were not incorporated into this list. Specimens were not examined, so taxa presented here are those reported in the …

Flight Of The Freshwater Fish, Michael H. Wilson

Capstones

Michael H. Wilson

Capstone Abstract

December 27, 2016

Flight of the Freshwater Fish

The Hudson River provides for millions of people as a path for commercial and private transportation, a source of food and energy, and perhaps most importantly for many living in the tri-state area as a destination for recreation and relaxation. The most overlooked feature of the river is how the wildlife shows clear signs of a changing climate and rapid environmental response to the impacts of global warming on the river.

Entire populations of fish species in the lower Hudson have been forced to leave the river …

Salvinia Molesta: An Assessment Of The Effects And Methods Of Eradication, Arti Lal

Master's Projects and Capstones

Salvinia molesta is an invasive aquatic fern. It is now the second worse aquatic invader in the world. Since the 1930s, it has invaded most tropical and some temperate countries. S. molesta plants grow vegetatively and can increase in size rapidly. S. molesta can form thick mats of up to 1-meter-thick. There are a number of ways these thick mats negatively affect the environment: 1) reduce light to benthic organisms, 2) reduce oxygen in the water column for other organisms, 3) accumulate as organic matter at the bottom of the water column, 4) decrease nutrients for other organisms, and 5) …

Review Of Northwestern African Buthacus, With Description Of Buthacus Stockmanni Sp. N. From Morocco And Western Sahara (Scorpiones, Buthidae), František Kovařík, Graeme Lowe, František Šťáhlavský

Euscorpius

Northwestern African Buthacus species are revised. Buthacus stockmanni sp. n. from Morocco and Western Sahara is described and fully complemented with color photos of live and preserved specimens, as well as their habitat. The hemispermatophore of B. stockmanni sp. n. is illustrated and described. In addition to morphology and hemi-spermatophores, we also describe the karyotypes of B. stockmanni sp. n. (2n=20). B. stockmanni sp. n. is compared with B. occidentalis Vachon, 1953 and B. ziegleri Lourenço, 2000. Both these species are differentiated from B. stockmanni sp. n. geographically and morphologically. The male of B. stockmanni sp. n. has fingers of …

First Report Of Lissothus Occidentalis Vachon, 1950 (Scorpiones: Buthidae) From Morocco And Western Sahara, With Notes On Ecology And Captive Breeding, Mark Stockmann, Carlos Turiel, Felix Althoff, Graeme Lowe, František Kovařík

Euscorpius

Genus Lissothus Vachon, 1948 represented by L. occidentalis Vachon, 1950 is reported for the first time from four localities in Morocco and the Western Sahara. We provide a revised diagnosis of L. occidentalis, fully complemented with color photos of live and preserved specimens. Hemispermatophore is also illustrated and described in detail. Furthermore, we describe aspects of the ecology of this species, and provide photos of collection sites and habitats. We also report on the reproductive biology of this species based on captive breeding and rearing. and provide the first envenomation report for the species.

The Impact Of Organic Farms: Biodiversity And Climate Change Resilience In The Southeast, Josie Newton

Earth and Environmental Sciences Presentations

Resilience to climate change serves as an indicator of the effectiveness of organic farming practices. Resilience means that an area is able to return to a stable state after a disturbance. In this context, it means that the area is able to function regularly even in the face of climate change, an instance that affects species health and biodiversity. By mapping the locations of organic farms across the southeastern United States along with the resilience scores of areas as evaluated by The Nature Conservancy and comparing this map to farm locations and biodiversity measures, we are able to determine the …

Effects Of Non-Consumptive Recreation And Environmental Factors On Arkansas State Park Biodiversity, Bennett P. Grooms

Theses and Dissertations from 2016

State parks serve a dual conservation role by offering protected habitat to many species while also promoting recreational use of natural resources. Non-consumptive recreation activities, however, have long-term negative effects on the behavior, physiology, and reproductive success of state park biotic communities. The purpose of my research was to investigate the possible synergistic effects of non-consumptive trail use, environmental factors, and trail design factors on avian, mesocarnivore, and woody vegetation communities in Arkansas state parks. During 18 May – 7 August 2015, I conducted avian point counts, trail user counts, set camera traps, and sampled vegetation at 227 points on …