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Behavioral Response Of Pacific Lamprey (Entosphenus Tridentatus) To Predator Odors, Laurie L. Porter 2015 Central Washington University

Behavioral Response Of Pacific Lamprey (Entosphenus Tridentatus) To Predator Odors, Laurie L. Porter

All Master's Theses

Pacific lamprey (Entosphenus tridentatus), a species facing serious threats to their existence, experience a number of challenges in reaching their desired spawning grounds during the adult migratory phase, and predators are suspected to be one of these challenges. Understanding if Pacific lamprey respond to predator odorants may provide a management tool for use in conjunction with attractants in guiding lamprey to suitable spawning habitat and deterring them from poor habitat. Previous research has failed to explore Pacific lamprey response to predator odorants, although much research exists on attractant odorants. In our study, we tested Pacific lamprey response to …


Carbon Storage And Preservation In Seagrass Meadows, Mohammad Rozaimi Jamaludin 2015 Edith Cowan University

Carbon Storage And Preservation In Seagrass Meadows, Mohammad Rozaimi Jamaludin

Theses: Doctorates and Masters

Seagrass meadows are important ‘Blue Carbon’ sinks but many questions remain unaddressed in regards to the organic carbon (OC) sequestration capacity and processes leading to retention and persistence of OC in seagrass sediments. The research summarised in this dissertation examined 37 sediment cores from twelve Australian seagrass meadows (Posidonia australis and Halophila ovalis) in order to improve our understanding of OC storage and preservation in seagrass sediments. The research: quantified the OC storage in seagrass meadows and the reduction in stores after ecosystem degradation; the rates of OC accumulation; the roles of species composition and the depositional nature …


River Report. State Of The Lower St. Johns River Basin, Florida: Water Quality, Fisheries, Aquatic Life, Contaminants, 2015, Environmental Protection Board, City of Jacksonville, University of North Florida, Jacksonville University, Lucy Sonnenberg, Gerry Pinto, Nisse Goldberg, Anthony Ouellette, Gretchen Bielmyer-Fraser, Stuart J. Chalk, Peter Bacopoulos, Brian P. Zoellner 2015 Jacksonville University

River Report. State Of The Lower St. Johns River Basin, Florida: Water Quality, Fisheries, Aquatic Life, Contaminants, 2015, Environmental Protection Board, City Of Jacksonville, University Of North Florida, Jacksonville University, Lucy Sonnenberg, Gerry Pinto, Nisse Goldberg, Anthony Ouellette, Gretchen Bielmyer-Fraser, Stuart J. Chalk, Peter Bacopoulos, Brian P. Zoellner

State of the River Report

No abstract provided.


Empirical Modelling Of Solid-Blocking Effect In A Blazka Respirometer For Gag, A Large Demersal Reef Fish, Richard J. Kline, Daryl C. Parkyn, Debra J. Murie 2015 The University of Texas Rio Grande Valley

Empirical Modelling Of Solid-Blocking Effect In A Blazka Respirometer For Gag, A Large Demersal Reef Fish, Richard J. Kline, Daryl C. Parkyn, Debra J. Murie

School of Earth, Environmental, & Marine Sciences Faculty Publications

The effect of solid-body blocking in a large (257 l) Blazka-style respirometer was examined in gag Mycteroperca microlepis. Gag ranging from 376-690 mm total length were tested at velocities from 10 to 91 cm s-1 . The solid blocking effect (SBE) due to fish size, swimming speed, and water temperature was investigated by direct measurement of flow velocity at the area of the fish’s maximum girth as compared to measurements at the rear (center) of the swimming chamber. Three models were compared as corrections for the SBE: the standard Bell and Terhune (BT), a novel modification of the Bell and …


Octocoral Mitochondrial Genomes Provide Insights Into The Phylogenetic History Of Gene Order Rearrangements, Order Reversals, And Cnidarian Phylogenetics, Diego F. Figueroa, Amy R. Baco 2015 The University of Texas Rio Grande Valley

Octocoral Mitochondrial Genomes Provide Insights Into The Phylogenetic History Of Gene Order Rearrangements, Order Reversals, And Cnidarian Phylogenetics, Diego F. Figueroa, Amy R. Baco

School of Earth, Environmental, & Marine Sciences Faculty Publications

We use full mitochondrial genomes to test the robustness of the phylogeny of the Octocorallia, to determine the evolutionary pathway for the five known mitochondrial gene rearrangements in octocorals, and to test the suitability of using mitochondrial genomes for higher taxonomic-level phylogenetic reconstructions. Our phylogeny supports three major divisions within the Octocorallia and show that Paragorgiidae is paraphyletic, with Sibogagorgia forming a sister branch to the Coralliidae. Furthermore, Sibogagorgia cauliflora has what is presumed to be the ancestral gene order in octocorals, but the presence of a pair of inverted repeat sequences suggest that this gene order was not conserved …


An Examination Of El Niño's And Agricultural Runoff's Effect On Harmful Algal Blooms And California Sea Lion (Zalophus Californianus) Health In Monterey Bay, Nadine Lafeber 2015 Scripps College

An Examination Of El Niño's And Agricultural Runoff's Effect On Harmful Algal Blooms And California Sea Lion (Zalophus Californianus) Health In Monterey Bay, Nadine Lafeber

Scripps Senior Theses

An increase in marine mammal stranding and die-off events has been observed along the California coast. The exact cause to explain for these recent events is unknown, but El Niño and harmful algal blooms are established sources for temporary decreases in marine mammal health. To determine whether El Niño could be causing and amplifying harmful algal blooms, particularly in Monterey Bay where they occur frequently, data was analyzed from the Marine Mammal Center in Sausalito, California. Data analysis focused on California sea lions (Zalophus californianus), because they have the largest data set and are directly affected by harmful …


Induction Of Larval Settlement In The Reef Coral Porites Astreoides By A Cultivated Marine Roseobacter Strain, Koty H. Sharp 2015 Roger Williams University

Induction Of Larval Settlement In The Reef Coral Porites Astreoides By A Cultivated Marine Roseobacter Strain, Koty H. Sharp

Arts & Sciences Faculty Publications

Successful larval settlement and recruitment by corals is critical for the survival of coral reef ecosystems. Several closely related strains of γ-proteobacteria have been identified as cues for coral larval settlement, but the inductive properties of other bacterial taxa naturally occurring in reef ecosystems have not yet been explored. In this study, we assayed bacterial strains representing taxonomic groups consistently detected in corals for their ability to influence larval settlement in the coral Porites astreoides. We identified one α-proteobacterial strain, Roseivivax sp. 46E8, which significantly increased larval settlement in P. astreoides. Logarithmic growth phase (log phase) cell cultures of Roseivivax …


Dissolved And Particulate Phosphorus Distributions And Elemental Stoichiometry Throughout The Chukchi Sea, Meryssa Piper 2015 University of South Carolina

Dissolved And Particulate Phosphorus Distributions And Elemental Stoichiometry Throughout The Chukchi Sea, Meryssa Piper

Theses and Dissertations

As the only gateway of material, particularly nutrients, from the Pacific to the Arctic Ocean, the biological and chemical transformations that occur within the Chukchi Sea are critical for understanding Arctic ecosystems. This study examines the biogeochemical cycling of the macronutrient phosphorus (P) relative to carbon and nitrogen in the eastern Chukchi Sea during the ICESCAPE’s mission. Sea ice and water column dissolved and particulate phosphorus samples were collected during two summer expeditions in 2010 (n=593) and 2011 (n=989). Despite being a landlocked marginal sea, the P pool present within the Chukchi Sea was substantially modified by biological processes with …


Factors Contributing To Interannual Variability In The Abundance Of Bay Anchovy (Anchoa Mitchilli) Larvae, Steven B. Vega Jr. 2015 University of South Carolina

Factors Contributing To Interannual Variability In The Abundance Of Bay Anchovy (Anchoa Mitchilli) Larvae, Steven B. Vega Jr.

Theses and Dissertations

Coastal ecosystems have been subject to increasing stressors over recent decades due to coastal development, human population growth, and climate change. Improving scientific understanding of the environmental factors which influence the productivity of fish populations in coastal ecosystems is vital to their prudent management, especially as the potential influence of anthropogenic climate change grows. Estuaries serve as critical habitats for many fishes of primary ecological, economic, and recreational importance. One such fish, the planktivorous Bay Anchovy (Anchoa mitchilli), is abundant along the Atlantic and Gulf coasts of the US and is a key prey resource for many estuarine and coastal …


The Effects Of Chanellization And Channel Restoration On Aquatic Habitat And Biota Of The Pecos River, New Mexico, Darrel J. Mecham 2015 South Dakota State University

The Effects Of Chanellization And Channel Restoration On Aquatic Habitat And Biota Of The Pecos River, New Mexico, Darrel J. Mecham

Electronic Theses and Dissertations

River channelization has been shown to negatively impact riverine ecosystems by degrading aquatic habitat conditions, decreasing diversity of both fish and aquatic invertebrate assemblages and impairing fish recruitment. As knowledge of the negative impacts of channelization has increased, so have channel restoration efforts. We evaluated a recent channel restoration project on the Pecos River, New Mexico by comparing abiotic and biotic conditions among five reaches of river, including the restored reach, an unchannelized reach and a channelized reach all prone to streamflow intermittence and an unchannelized reach and channelized reach more perennial in nature. Our first objective was to assess …


Effects Of The Deepwater Horizon Oil Spill On Deep Sea Fishes, Arianne Ella Leary 2015 University of North Florida

Effects Of The Deepwater Horizon Oil Spill On Deep Sea Fishes, Arianne Ella Leary

UNF Graduate Theses and Dissertations

The Deepwater Horizon Oil Spill (DWH) released about 4.4 million barrels of crude oil into the Gulf of Mexico (GOM), making it one of the largest oil spills in U.S. history. Additionally, the depth of the spill (i.e., 1500 meters) created a unique research opportunity because most oil spills occur at the surface and affect coastal rather than deepwater habitats. Polycyclic aromatic hydrocarbons (PAHs) are the most toxic components of oil, and are often the focus of oil exposure studies. PAHs are quickly metabolized by vertebrates; therefore, indicators of biological responses to PAH exposure (PAH “biomarkers”) such as the levels …


The Reproductive Biology Of The Finetooth Shark, Carcharhinus Isodon, In The Northwest Atlantic Ocean, Amanda N. Brown 2015 University of North Florida

The Reproductive Biology Of The Finetooth Shark, Carcharhinus Isodon, In The Northwest Atlantic Ocean, Amanda N. Brown

UNF Graduate Theses and Dissertations

Shark fisheries are a multimillion dollar industry in the United States and have significant contributions both recreationally and commercially. In order to maintain this industry, fisheries must be properly managed. An understanding of life history and reproduction is crucial in order to adequately manage shark fisheries. The finetooth shark, Carcharhinus isodon, is a member of the small coastal shark (SCS) fishery complex. It is found in Atlantic waters from South Carolina to Florida and throughout the Gulf of Mexico. This species has recently come under increased fishing pressure and has previously been overfished. New data is needed in order …


Habitat Value Of Restored Intertidal Shoreline For Fish And Macrobenthic Communities In Northeast Florida, Shannon K. Dunnigan 2015 University of North Florida

Habitat Value Of Restored Intertidal Shoreline For Fish And Macrobenthic Communities In Northeast Florida, Shannon K. Dunnigan

UNF Graduate Theses and Dissertations

Oyster reefs are declining worldwide, as well as the economic and ecological value of oysters to their respective systems. Numerous restoration efforts have been undertaken in hopes of re-establishing these shellfish populations. This study evaluated a restoration project within the Guana Tolomato Matanzas estuary in northeast Florida, U.S.A., to investigate community structure as well as seasonal patterns in species abundance and diversity of juvenile fish and benthic macrofauna within restored and unrestored intertidal habitats along the Guana Peninsula. The first objective was to determine whether the artificially created reefs provided similar quantity and diversity of benthic macrofauna as adjacent unrestored …


Molecular Identification And Functional Characteristics Of Peptide Transporter 1 (Pept1) In The Bonnethead Shark (Sphyrna Tiburo), Hannah Hart 2015 University of North Florida

Molecular Identification And Functional Characteristics Of Peptide Transporter 1 (Pept1) In The Bonnethead Shark (Sphyrna Tiburo), Hannah Hart

UNF Graduate Theses and Dissertations

Many elasmobranchs are considered top predators with worldwide distribution, and in general these fish play an important role in the transfer of energy from the lower to the upper trophic levels within the marine ecosystem. Despite this, little research has been done regarding the rates of prey ingestion, digestion, and the processes of energy and nutrient absorption. Specifically understudied is enzymatic digestion within the intestinal brush border, which functions to break down macromolecules into smaller subunits for luminal absorption across the gastrointestinal epithelium. Given their carnivorous diet, the present study sought to expand knowledge on nutrient intake in elasmobranchs by …


Fate And Behavior Of Silver Nanoparticles To The Estuarine Organisms, Prorocentrum Minimum And Crassostrea Virginica, Shelby Victoria Butz 2015 University of South Carolina

Fate And Behavior Of Silver Nanoparticles To The Estuarine Organisms, Prorocentrum Minimum And Crassostrea Virginica, Shelby Victoria Butz

Theses and Dissertations

Nanoparticles are known to be entering the environment and are shown to have adverse effects on aquatic organisms (Fabrega et.al. 2011, Lapresta-Fernandez et.al. 2012, Matranga and Corsi 2012, Moore 2006). The purpose of this study was to quantify the uptake of AgNPs by two estuarine organisms and determine the associated toxic effects of accumulation. There are multiple procedures for nanoparticle (NP) synthesis that involve various core and surface materials, which result in various characteristics such as size, shape, and surface coating. In this study silver nanoparticles (AgNPs) were synthesized by a chemical reduction of silver salts and characterized in stock …


Shortfalls And Solutions For Meeting National And Global Conservation Area Targets, Stuart H. M. Butchart, Martin Clarke, Robert J. Smith, Rachel E. Sykes, Jorn P. W. Scharlemann, Mike Harfoot, Graeme M. Buchanan, Ariadne Angulo, Andrew Balmford, Bastian Bertzky, Thomas M. Brooks, Kent E. Carpenter, 28 Others 2015 Old Dominion University

Shortfalls And Solutions For Meeting National And Global Conservation Area Targets, Stuart H. M. Butchart, Martin Clarke, Robert J. Smith, Rachel E. Sykes, Jorn P. W. Scharlemann, Mike Harfoot, Graeme M. Buchanan, Ariadne Angulo, Andrew Balmford, Bastian Bertzky, Thomas M. Brooks, Kent E. Carpenter, 28 Others

Biological Sciences Faculty Publications

Governments have committed to conserving greater than or equal to 17% of terrestrial and greater than or equal to 10% of marine environments globally, especially "areas of particular importance for biodiversity" through "ecologically representative" Protected Area (PA) systems or other "area-based conservation measures", while individual countries have committed to conserve 3-50% of their land area. We estimate that PAs currently cover 14.6% of terrestrial and 2.8% of marine extent, but 59-68% of ecoregions, 77-78% of important sites for biodiversity, and 57% of 25,380 species have inadequate coverage. The existing 19.7 million km super(2) terrestrial PA network needs only 3.3 million …


Quantifying Florida Bay Habitat Suitability For Fishes And Invertebrates Under Climate Change Scenarios, Kelly A. Kearney, Mark J. Butler IV, Robert Glazer, Christopner R. Kelble, Joseph E. Serafy, Erik Stabenau 2015 Old Dominion University

Quantifying Florida Bay Habitat Suitability For Fishes And Invertebrates Under Climate Change Scenarios, Kelly A. Kearney, Mark J. Butler Iv, Robert Glazer, Christopner R. Kelble, Joseph E. Serafy, Erik Stabenau

Biological Sciences Faculty Publications

The Florida Bay ecosystem supports a number of economically important ecosystem services, including several recreational fisheries, which may be affected by changing salinity and temperature due toclimate change. In this paper, we use a combination of physical models and habitat suitability index models to quantify the effects of potential climate change scenarios on a variety of juvenile fish and lobster species in Florida Bay. The climate scenarios include alterations in sea level, evaporation and precipitation rates, coastal runoff, and water temperature. We find that the changes in habitat suitability vary in both magnitude and direction across the scenarios and species, …


A Popular And Potentially Sustainable Fishery Resource Under Pressure-Extinction Risk And Conservation Of Brazilian Sciaenidae (Teleostei: Perciformes), Ning L. Chao, Flávia L. Frédou, Manuel Haimovici, Monica B. Peres, Beth Polidoro, Marcelo Raseira, Rosana Subira, Kent E. Carpenter 2015 Old Dominion University

A Popular And Potentially Sustainable Fishery Resource Under Pressure-Extinction Risk And Conservation Of Brazilian Sciaenidae (Teleostei: Perciformes), Ning L. Chao, Flávia L. Frédou, Manuel Haimovici, Monica B. Peres, Beth Polidoro, Marcelo Raseira, Rosana Subira, Kent E. Carpenter

Biological Sciences Faculty Publications

Croakers (Sciaenidae) are major fishery resource in Brazil; constituting 22% of marine and 9% of freshwater fishery landings. Croakers are subject to heavy fishing pressure throughout Brazil, but habitat alteration is also an important threat to regional populations. In this regional Sciaenidae assessment, each species was analyzed for relative risk of extinction, including the identification and quantification of the impact of major threats and existing conservation measures, based on application of the Categories and Criteria of the IUCN Red List of Threatened Species. Of the 52 species of Sciaenid fishes (34 marine and 18 freshwater) present in Brazilian waters, the …


Casitas: A Location-Dependent Ecological Trap For Juvenile Caribbean Spiny Lobsters, Panulirus Argus, Benjamin C. Gutzler, Mark J. Butler IV, Donald C. Behringer 2015 Old Dominion University

Casitas: A Location-Dependent Ecological Trap For Juvenile Caribbean Spiny Lobsters, Panulirus Argus, Benjamin C. Gutzler, Mark J. Butler Iv, Donald C. Behringer

Biological Sciences Faculty Publications

Casitas are artificial shelters used by fishers to aggregate Caribbean spiny lobsters (Panulirus argus) for ease of capture. However, casitas may function as an ecological trap for juvenile lobsters if they are attracted to casitas and their growth or mortality is poorer compared with natural shelters. We hypothesized that juvenile lobsters may be at particular risk if attracted to casitas because they are less able than larger individuals to defend themselves, and do not forage far from shelter. We compared the nutritional condition, relative mortality, and activity of lobsters of various sizes in casitas and natural shelters in adult and …


Horseshoe Crab Research In Urban Estuaries: Challenges And Opportunities, Jennifer Mattei, Mark L. Botton, Mark Beekey, Christina P. Colón 2015 Sacred Heart University

Horseshoe Crab Research In Urban Estuaries: Challenges And Opportunities, Jennifer Mattei, Mark L. Botton, Mark Beekey, Christina P. ColóN

Biology Faculty Publications

Horseshoe crabs rely on estuaries for food resources, places to spawn and for larvae and juveniles to develop and grow. Many of these estuaries are becoming increasingly urbanized and dominated by human activity. An urban estuary is characterized by armored shorelines, high nutrient loads, large fluctuations in algal and bacteria populations, increased levels of pollutants like heavy metals and pesticides, and seasonally low oxygen levels and pH. While urban estuaries are challenging for horseshoe crab survival and to researchers trying to study them, there are also opportunities for involving the public in research and increasing public awareness of the importance …


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