Biodiversity Commons^™

Defining Biodiversity: A Local Assessment Of The Tahuayo River, Peru Using Self-Directed Photography, Rozsika D. Steele

All Master's Theses

The Área de Conservación Regional Comunal Tamshiyacu Tahuayo (ACRCTT), located in Loreto, Peru, protects 420,000 hectares of the Amazon basin. In 2009, the ACRCTT received formal government recognition after three decades of advocacy and conservation work by resident communities. Local resource users who live a subsistence lifestyle possess sophisticated Traditional Ecological Knowledge (TEK) that can be used to identify which constituents of biodiversity are culturally relevant. This information can help resource managers develop an operational definition of biodiversity. Self-directed photography is a research method that allows participants the opportunity to direct data collection and empowers them to visually communicate their …

Madagascar’S Mangroves: Quantifying Nation-Wide And Ecosystem Specific Dynamics, And Detailed Contemporary Mapping Of Distinct Ecosystems, Trevor G. Jones, Leah Glass, Samir Gandhi, Lalao Ravaoarinorotsihoarana, Aude Carro, Lisa Benson, Harifidy Rakoto Ratsimba, Chandra Giri, Dannick Randriamanatena, Garth Cripps

Environmental Science and Management Faculty Publications and Presentations

Mangrove ecosystems help mitigate climate change, are highly biodiverse, and provide critical goods and services to coastal communities. Despite their importance, anthropogenic activities are rapidly degrading and deforesting mangroves world-wide. Madagascar contains 2% of the world’s mangroves, many of which have undergone or are starting to exhibit signs of widespread degradation and deforestation. Remotely sensed data can be used to quantify mangrove loss and characterize remaining distributions, providing detailed, accurate, timely and updateable information. We use USGS maps produced from Landsat data to calculate nation-wide dynamics for Madagascar’s mangroves from 1990 to 2010, and examine change more closely by partitioning …

Proof Of Acacia Nilotica Stand Expansion In Bekol Savanna, Baluran National Park, East Java, Indonesia Through Remote Sensing And Field Observations, Sutomo, Eddie Van Etten, Luthfi Wahab

Research outputs 2014 to 2021

One of woody species that is known to inhabit certain savanna ecosystems is Acacia nilotica. The Acacia nilotica tree is widespread in the northern savannah regions, and its range extends from Mali to Sudan and Egypt. Acacia nilotica was first introduced to Java Island in 1850. It then spread to Bali, East Nusa Tenggara, Timor and Papua. Found in grasslands, savanna is reported as important colonizer at Baluran National Park in East Java and Wasur National Park Papua. We conducted Vegetation analysis in three areas of the Baluran Savanna namely: Grazed, burned and unburnt. Our observation result analysis showed that …

Pollinator Sharing Between Mimulus Ringens And Coflowering Plant Species In Northeastern Ohio, Andrew M. Wuellner

Williams Honors College, Honors Research Projects

Competition between plants for pollinators can have serious impacts on plant reproduction; these impacts depend on many factors, such as plant abundance, plant diversity, floral abundance, pollinator abundance, and pollinator preference. The way pollinators move among and between coflowering species can tell us more about how these factors affect competition. In this study, we examine the movement patterns of flower visitors to Mimulus ringens and coflowering species in Northeastern Ohio through several types of observations. In addition, we measured the density and diversity of floral units with 20-30 meter transects across each study site. There were six total study sites, …

Wetland Condition Matters: Amphibian Richness And Abundance Change Across Wetland Condition Gradient, Kari Dupler

Online Theses and Dissertations

In the past century, Kentucky has lost more than 80% of its wetlands, and because state-wide monitoring was historically minimal, this number is likely underestimated. The Kentucky Division of Water, with Eastern Kentucky University and a technical working group, developed a rapid wetland assessment method (i.e. KY-WRAM) to assess wetland quality and aid in establishing mitigation levels and long-term monitoring. Validation of the KY-WRAM’s ability to reflect wetland condition requires comparison to intensive biotic assessments of amphibian, plant, and bird communities. Wetland and amphibian surveys for the 2014 and 2015 seasons were conducted at 42 riverine wetlands in the Kentucky …

Territoriality And Inter-Pack Aggression In Gray Wolves: Shaping A Social Carnivore's Life History Rudyard Kipling's Law Of The Jungle Meets Yellowstone's Law Of The Mountains, Kira A. Cassidy, Douglas W. Smith, L. David Mech, Daniel R. Macnulty, Daniel R. Stahler, Matthew C. Metz

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

When Rudyard Kipling wrote The Jungle Book in 1894 and included the famous line "For the strength of the Wolf is the Pack, and the strength of the Pack is the Wolf," he would have had no idea that over a century later, scientific research would back up his poetic phrase. Recent studies in Yellowstone have found that both the individual wolf and the collective pack rely on each other and play important roles in territoriality. At a time when most fairy tales and fables were portraying wolves as demonic killers or, at best, slapstick gluttons, Kipling seemed to have …

Wolf (Canis Lupus) Generation Time And Proportion Of Current Breeding Females By Age, L. David Mech, Shannon M. Barber-Meyer, John Erb

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

Information is sparse about aspects of female wolf (Canis lupus) breeding in the wild, including age of first reproduction, mean age of primiparity, generation time, and proportion of each age that breeds in any given year. We studied these subjects in 86 wolves (113 captures) in the Superior National Forest (SNF), Minnesota (MN), during 1972–2013 where wolves were legally protected for most of the period, and in 159 harvested wolves from throughout MN wolf range during 2012–2014. Breeding status of SNF wolves were assessed via nipple measurements, and wolves from throughout MN wolf range, by placental scars. In …

Trematode Diversity In Freshwater Fishes Of The Globe Ii: “New World”, Anindo Choudhury, M. Leopoldina Aguirre-Macedo, Stephen S. Curran, Margarita Ostrowski De Núñez, Robin M. Overstreet, Gerardo Pérez-Ponce De León, Cláudia Portes Santos

Harold W. Manter Laboratory of Parasitology: Faculty Publications

We provide a summary overview of the diversity of trematode parasites in freshwater fishes of the “New World,” i.e. the Americas, with emphasis on adult forms. The trematode fauna of three regions, South America, Middle America, and USA and Canada (North America north of Mexico), are considered separately. In total, 462 trematode species have been reported as adults from the Americas. The proportion of host species examined for parasites varies widely across the Americas, from a high of 45% in the Mexican region of Middle America to less than 5% in South America. North and South America share no adult …

The Small Mammals Of Southeastern Virginia As Revealed By Pitfall Trapping, Robert K. Rose

Biological Sciences Faculty Publications

Pitfall trapping is a poor method to catch small mammals but the only way to catch and study the Southeastern Shrew (Sorex longirostris), the primary mammal of interest in the field studies reported here. While learning much about its distribution and abundance, still more was learned about the other small mammals present in forests and fields of eastern Virginia. A total of 15 species was captured at 19 locations during the 1990-2013 period, including five shrews, two moles, and eight rodents, representing all but one of the common small mammals in eastern Virginia.

Genome Wide Epigenetic Analyses Of Araptus Attenuatus, A Bark Beetle, Chitra Seshadri

Theses and Dissertations

Phylogeographic studies have relied on surveying neutral genetic variation in natural populations as a way of gaining better insights into the evolutionary processes shaping present day population demography. Recent emphasis on understanding putative adaptive variation have brought to light the role of epigenetic variation in influencing phenotypes and the mechanisms underlying local adaptation. While much is known about how methylation acts at specific loci to influence known phenotypes, there is little information on the spatial genetic structure of genome-wide patterns of methylation and the extent to which it can extend our understanding of both neutral and putatively adaptive processes. This …

From Seed To Sky: Impacts Of Explosive Compounds On Vegetation Across Spatial And Developmental Scales, Stephen M. Via

Theses and Dissertations

Explosive compounds are broadly distributed across the globe as a result of nearly two centuries of munitions use in warfare and military activities. Two explosive compounds have seen disproportionate use; RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine) and TNT (2-methyl- 1,3,5-trinitrobenzene), being the most commonly found explosives in the environment. The effects of explosives on biota have been studied in great detail; however, there is a general lack of understanding with regard to broader ecological impacts of these contaminants. My dissertation objective was to follow the impacts of explosive compounds on vegetation across scales. Impacts on vegetation at the species scale alter community composition via …

Multiple Records Of Monoecy In Dioecious Taxa Of Hawaiian Coprosma Spp. (Rubiaceae)., Jason T. Cantley, Danielle Frohlich, Chris Martine

Faculty Journal Articles

The breeding systems of the 110+ species of Coprosma J.R. Forst. & G. Forst. across the Pacific are largely considered dioecious, with male and female flowers occurring on separate plants (oliver 1935). However, for many species, particularly of New Zealand, the dioecious breeding system is leaky. Coprosma species exhibiting leaky dioecy are primarily dioecious, with male and female flowers on separate plants, but individuals occasionally develop apparently functional bisexual flowers, which sporadically occur among an abundance of unisexual flowers. A putative monoecious Coprosma taxon was once reported for the Macquarie Island individuals of C. perpusilla Colenso (= C. pumila Hook.f.), …

Evidence Of Rock Kangaroo Seed Dispersal Via Faecal Seed Storage In A Tropical Monsoon Community, Chris Martine, Ally Boni, Elizabeth Capaldi, Gemma Lionheart, Ingrid E. Jordon-Thaden

Faculty Journal Articles

While some of the plant species of the ‘Sandstone Country’ along the escarpment of western Arnhem Land produce fleshy fruits and appear to rely on biotic methods of seed dispersal, little is known about the methods by which this is achieved – and few potential dispersers co-occur in the sandstone outcrop communities. For the present study, scat collections were made on outcrops in the northeastern area of Kakadu National Park with the hope of uncovering relationships between local frugivores and fruit-producers, and providing evidence for seasonal storage of mammal-dispersed seeds in scat prior to germination. The goals of the present …

2016 International Symposium On Galliformes (Beijing, China: October 21-23, 2016): Programme And Abstracts, World Pheasant Association, China Ornithological Society

Galliformes Specialist Group and Affiliated Societies: Conference Proceedings

Evolutionary relationships among galliforms using 1000’s of unlinked loci, Rebecca Kimball

Ecology, behaviour and conservation problems in Siberian grouse Falcipennis falcipennis (Hartlaub 1855), Siegfried Klaus

Taxonomy, genetics and evolution in a highly subspecies-rich pheasant Phasianus colchicus, Yang Liu

Survey of the Blyth’s tragopan Tragopan blythii in western Myanmar, Nan Wang

Activity rhythm of green peafowl (Pavo muticus) in Konglonghe Nature Reserve based on camera-trap data, Pengfei Shan

Studies on unusual incubation behavior and embryonic tolerance of hypothermia by the Sichuan partridge (Arborophila rufipectus), Yiqiang Fu

The breeding behavior and nest selection of Sclater’s monal ( …

Spatial Biodiversity Patterns Of Fish Within The Aransas Bay Complex, Texas, Bridgette F. Froeschke, Megan M. Reese Robillard, Gregory W. Stunz

Gulf and Caribbean Research

The goal of this study was to consider the effects of habitat type and environmental conditions on the biodiversity of fishes within the Aransas Bay Complex, Texas and provide a management framework and an ecosystem examination of Essential Fish Habitat (EFH). A stratified, randomized experimental design was used to collect fishes from seagrass, oyster, and non-vegetated habitats within the Aransas Bay Complex from February through May 2010 over large spatial scales at the “bay-complex” level. We developed a biodiversity habitat model using Boosted Regression Trees (BRT). Fitted functions from the “best” fit BRT habitat model indicated that fish biodiversity was …

Parasites From The Red Lionfish, Pterois Volitans From The Gulf Of Mexico, Alexander Q. Fogg, Carlos F. Ruiz, Stephen S. Curran, Stephen A. Bullard

Gulf and Caribbean Research

No abstract provided.

Isolation And Identification Of Bacterial Endosymbionts In The Brooding Brittle Star Amphipholis Squamata, Abbey Rose Tedford

Honors Theses and Capstones

Symbiotic associations with subcuticular bacteria (SCB) have been identified and studied in numerous echinoderms, including the SCB of the brooding brittle star, Amphipholis squamata. These SCB, however, have not been studied using current next generation sequencing technologies. Previous studies on the SCB of A. squamata placed these bacteria in the genus Vibrio (γ-Proteobacteria), but subsequent studies suggested that the SCB are primarily composed of α-Proteobacteria. The present study examines the taxonomic composition of SCB associated with A. squamata from the Northwest Atlantic. DNA was extracted using a CTAB protocol and 16S rRNA sequences were amplified …

Using Linear Mixed Models To Analyze Native And Non-Native Species Abundances In Coastal Sage Scrub, Kaylee Anderson

Scripps Senior Theses

Coastal Sage Scrub (CSS) is a low scrubland plant community native to the coasts of California, housing many threatened and endangered species. Due to the invasion of non-native plants, many areas of CSS have type converted to annual grasslands and the fire frequency has accelerated; fire in turn, may facilitate further invasion, leading to a loss of biodiversity. While many studies document post-fire succession in these communities, pre-fire data are rarely available for comparison, especially data on seedling emergence. I analyzed post-fire recovery of a type-converted grassland community, comparing seedling emergence data for the first and third year after fire …

Taxonomic Review Of The Wingmite Genus Cameronieta (Acari: Spinturnicidae) On Neotropical Bats, With A New Species From Northeastern Brazil, Juliana C. Almeida, Donald D. Gettinger, Scott Lyell Gardner

Scott L. Gardner Publications

The ectoparasitic mite genus Cameronieta (Acari: Mesostigmata: Spinturnicidae) is endemic to the New World and associated exclusively with bats of the family Mormoopidae. The genus consists of 7 species, 4 broadly distributed through the Caribbean and mainland of North and South America, and 3 species limited to the Greater Antilles archipelago. We present a brief review of the taxonomic history, redefine the genus, and consider some questions that remain concerning the biology and systematics of the group. A new species, Cameronieta almaensis n. sp., is described from the wings of Pteronotus parnellii collected from the Serra das Almas Reserve, in …

Phylogeny And Biogeography Of Species Of Syphacia Seurat, 1916 (Nemata : Oxyurida : Oxyuridae) From The Australian Bioregion, Haylee J. Weaver, Scott Monks, Scott Gardner

Scott L. Gardner Publications

Pinworm nematodes of the genus Syphacia (Nemata : Oxyurida : Oxyuridae) have a global distribution, and infect the caecum of rodents. Within the Australian Bioregion, 17 species of Syphacia infect a range of rodent hosts. Pinworms are traditionally thought to have coevolutionary relationships with their hosts, but the evolution and dispersal of Australian rodents and their helminths remains unclear. This combination of factors allowed us to investigate the likely relationships of Australian Syphacia species based on phylogenetic analysis, overlaid with the ecology and relationships of host species. We conducted a phylogenetic analysis using morphological characters of the species of Syphacia …