Life Sciences Commons^™

Development Of Innovative Flocculation Technologies For Agricultural Water Treatment, Noor Haleem

Electronic Theses and Dissertations

The development of innovative flocculation technologies is essential for addressing the challenges of agricultural water treatment. These technologies play a crucial role in removing contaminants such as suspended solids and nutrients, thereby ensuring safer water for irrigation and livestock consumption. By enhancing water quality and wastewater management, they contribute significantly to environmental sustainability and public health in agricultural communities. This comprehensive thesis extensively explores various dimensions of flocculation, with a focused effort on methodologies and resources aimed at strengthening sustainability and efficiency. A pivotal aspect of the research involves synthesizing cationic starch (CS), a flocculant derived from an underutilized resource, …

Advancing Biological Applications Through Microfluidic-Based Tool Development, K.M. Taufiqur Rahman

Electronic Theses and Dissertations

This research undertook an interdisciplinary approach, integrating bioengineering, microbiology, molecular biology, and systems biology to investigate bacterial dynamics behavior. Specifically, it delved into the development of microfluidic devices for biological applications such as bacterial cell counts, real-time observation of plant roots (here, specialized lectin-coated microbeads are used that mimic root characteristics), and soil microbe interactions. Furthermore, Next-Generation Sequencing and systems biology methodologies were employed to explore the intricate, multifaceted survival mechanisms of Escherichia coli persister population. Studying and quantifying persisters or testing for the existence of VBNC (viable but nonculturable) is challenging. These experiments require precise counts. It has been …

The Relationship Of Macronutrient Intake With Growth In Children With Type 1 Diabetes Mellitus, Jessica L. Freeling

Electronic Theses and Dissertations

Child growth, a sensitive metric of overall health, results from the intricate interplay of nature and nurture. While the importance of nutrition in child growth is well established, growth trajectories exhibit substantial individual variability, influenced by sex and age, and often characterized by nonlinear patterns. Inadequate nutrition or disease can hinder growth, with potential for recovery upon proper nutrition or acute disease resolution. However, chronic disease or persistent malnutrition may lead to permanent growth perturbation. Notably, before the advent of insulin, chronic stunting and wasting were hallmarks of Type 1 diabetes mellitus (T1DM), though the specific impacts under modern standard …

Plant Available Water Drives Semi-Arid Forage Quality And Quantity In A Common Garden Greenhouse Experiment, Parker J. Witt

Electronic Theses and Dissertations

Rangeland forage nutrition and biomass production are integral components of sustainable livestock grazing systems and are controlled by soil quality and precipitation. I examined the effects of precipitation on growth and nutrition of three forage species in four different soils that span the longitudinal moisture gradient in South Dakota. I grew little bluestem (Schizachyrum scoparium), western wheatgrass (Pascopyrum smithii), and smooth brome (Bromus inermis) in soils representing the eastern tallgrass/mid-grass prairie (Brookings, 700 mm avg. precipitation.), an eastern mid-grass prairie (Highmore, 550 mm avg. precipitation.), a western mid-grass prairie (Cottonwood, 450 mm avg. precipitation.), and a western mid-grass/short-grass prairie (Sturgis, …

The Influence Of By-O-Reg+ Beef, An Oregano-Based Essential Oil Supplement, On Growth Performance, Carcass Traits And Meat Quality Of Finishing Beef Steers, Bergin Mackenzie Debruin

Electronic Theses and Dissertations

The objective of this thesis was to determine the influence of an oregano-based essential oil (OEO; By-O-Reg+ Beef), on growth performance, carcass traits, and meat quality of beef steers finished in an all-natural program. Yearling steers were allotted to 16 pens (n = 8 pens per treatment, 8 steers per pen). Treatments included: 1) control (CON) fed no oregano-based essential oil and 2) group fed 4 g/steer daily of By-O-Reg+ Beef. Steers were harvested on day 149 of the feeding period. Standard carcass data was collected and instrumental color (L*, a*, b*) was recorded. Strip loins were collected from a …

Spf 50: Safe And Prosperous Futures Preparing For The Mid-Century Climate Reality, Michele Romolini, Mary Hillemeier, Dustin Herrmann, Miriam Bar-Zemer

Center for Urban Resilience Reports

The Safe and Prosperous Futures Project, SPF 50, is the third and final phase of a multi-year project led by TreePeople entitled Cooler and Healthier: Reducing Heat-Health Risk Using Urban Forestry & Stakeholder Engagement. The overall project aim is to address heat exposure by 1) developing a model analysis and processes to assess heatrelated mortality and morbidity, 2) creating strategies to address heat effects by canopy increase and albedo changes in the built environment, and 3) conducting stakeholder engagement to develop culturally relevant climate adaptation responses. Earlier phases of the project resulted in the publications RX for Hot Cities 2 …

Considerations And Applications Of Environmental Dna In Biodiversity Studies, Sarah Tomke

Theses and Dissertations--Forestry and Natural Resources

Environmental DNA (eDNA) sampling—the detection of species through genetic material shed into the environment—has become an efficient and reliable method for biodiversity assessments. The method has grown in popularity due to its non-invasive and non-destructive nature, and has revolutionized monitoring efforts for rare, elusive, and cryptic species for which traditional sampling approaches are often costly and ineffective. Hundreds of studies have utilized this technique to study species occupancy, delineate distributions, and assess relative community composition. Although eDNA sampling is an effective strategy for many conservation and ecological studies, recently, light has been shed on some of its potential drawbacks and …

Ua94/6/18 Stephen Flora Student / Alumni Papers, Wku Archives

WKU Archives Collection Inventories

Records created by and about Stephen Flora during his years as a student at Western Kentucky University.

Aspen Forest Condition Assessment And Restoration Guidance, Paul C. Rogers

Aspen Bibliography

This preliminary report is the first installment of an ongoing aspen assessment at Bryce Canyon National Park (BCNP). Over a 1.5-year period beginning in 2021, I assembled available BCNP and conducted a preliminary field survey to gain a better understanding of the quaking aspen (Populus tremuloides) resource within the Park. Findings suggest a long history of vegetation mapping with mixed results in terms of highlighting aspen presence a notable species of overall low coverage as well as aspen importance, at BCNP. In brief, though this species has limited presence, it is of high biodiversity conservation value. According to …

Capfish Project Report : Phase 1 Outcomes And Summer Academy For The Mediterranean, World Maritime University

Reports

Illegal, unreported and unregulated (IUU) fishing is a complex and multifaceted problem, with disastrous consequences for aquatic ecosystems, coastal communities, fishers and fish workers, and economic and national security. Over the past three years, the CAPFISH Project has strengthened capacity to fight IUU fishing by providing training and educational materials to developing country administrations around the world, most recently with a two-week regional Summer Academy for the Mediterranean. The Academy ran for two weeks and targeted delegates from fisheries administrations in developing countries in North Africa, the Middle East, and Southeast Europe, as a way to promote inter-regional learning and …

The Effects Of Alcohol On Crash Avoidance Reaction Time In A Driving Simulator Task In Humans, Aishwarya Vasudevan

Wayne State University Theses

AIM 1: Alcohol-impaired driving continues to be a significant cause of car crash injuries and deaths. The blood alcohol concentration (BAC) cut-off level for drunk driving is 0.08% in Michigan, and is estimated that lowering this cut-off to 0.05%would save 500–800 lives every year in the US alone. We used a portable virtual reality (VR)-based driving simulator to demonstrate the effects of alcohol at BAC concentrations 0.02-0.08%, grouped into 0.01% increments, on driving performance, specifically Crash Avoidance Reaction Time (CART), i.e., the time (in msec) required to initiate a steering avoidance response. We found that BAC concentrations as low as …

High-Throughput Screening Of Fda-Approved Drugs For Protecting Retinal Pigment Epithelial Cells Against Er Stress Induced Cell Death: Implications For Age-Related Macular Degeneration, Shaima Ali Jawarneh

Wayne State University Theses

Purpose: Age-related macular degeneration (AMD) is a leading cause of blindness in the elderly population, characterized by the degeneration of the retinal pigment epithelium (RPE). The link between endoplasmic reticulum (ER) stress and AMD is well established, however FDA-approved medications for the treatment of AMD caused by unregulated ER stress are limited and have potential side effects. The purpose of this study was to conduct a comprehensive screening of the FDA-approved drug library in order to identify potential candidates that could be repurposed in order to protect against the degeneration and death of RPE cells due to ER stress.

Methods: …

Lead Bioaccessibility And Commonly Measured Soil Characteristics (Detroit, Mi, Usa) – Phase 1, Sabrina R. Good, Allison R. Harris, Patrick Crouch, Conor T. Gowan, William D. Shuster, Shawn P. Mcelmurry

Open Data at Wayne State

Contaminated urban soil is one of the major contributors to child Pb exposure. To gain a better understanding of Pb risk in urban areas, composite samples were collected from 142 residential, privately owned, parcels in Detroit, Hamtramck, and Highland Park, Michigan, with approval from the property owners. The proximity of soil sampling and former smelter locations were also reported. Sample were collected from areas covered with turf grass. Four samples were collected, one from each cardinal direction (north, south, east, and west), 20 cm from an aluminum tent stake driven into the center of the sampling site. Soils were collected …

Design, Synthesis, And Evaluation Of Class Iia Histone Deacetylase (Hdac) Inhibitors, Lauren Nicole Kotsull

Wayne State University Dissertations

Histone deacetylase (HDAC) proteins are linked to disease states, including cancer, and have become important targets for therapeutic development. Many inhibitors have been developed to target HDAC proteins, including FDA-approved inhibitors Vorinostat (SAHA), Belinostat, Romidepsin, and Panobinostat. These inhibitors non-specifically influence most of the 11 metal-dependent HDAC isoforms, which might contribute to the side effects that patients experience during treatment. The lack of selectivity also diminishes the use of HDAC inhibitors as biomedical research tools. To address these drawbacks, the development of selective inhibitors has been heavily studied. Yet, reported inhibitors are predominantly selective for class I HDAC isoforms (HDACs …

Africa’S Overlooked Top Predator: Towards A Better Understanding Of Martial Eagle Feeding Ecology In The Maasai Mara, Kenya, Richard Stratton Hatfield, Allison G. Davis, Ralph Buij, John J. Cox, Shiv Kapila, Lemein Parmuntoro, Simon Thomsett, Munir Z. Virani, Peter Njoroge, Frank Van Langevelde

Forestry and Natural Resources Faculty Publications

Raptors exert top-down influences on ecosystems via their effects on prey population dynamics and community composition. Most raptors are sympatric with other predators, thus complicating our understanding of their relative influence in these systems. Estimates of kill rates and prey biomass recycling have been used as predation metrics that allow quantitative comparison among species and assessment of the relative role of single species within complex food webs. Few studies have produced findings of kill rates or prey biomass recycling for raptors. We used a supervised machine learning algorithm to behaviourally classify high resolution accelerometer informed GPS locations of tagged adult …

Exploring The Role Of Uncharacterized Gene Yjbe In Bacterial Persistence, Isaac Kovash

Schultz-Werth Award Papers

Antibiotic resistance has become a major global health concern as it decreases antibiotic efficacy and continues to emerge each year. A major driving force behind antibiotic resistance is a small subset of the bacterial population (known as persisters) that enter a metabolically repressed state in response to antibiotics, allowing them to survive long-term antibiotic treatments. After the antibiotic treatment period is over persisters can reestablish and reoccur the infection. However, the central mechanism behind persister formation remains debated and unclear. Our previous transcriptomic analysis of the persister population of Escherichia coli Dh5αZ1 showed that several genes are upregulated during persister …

13 C-Stable Isotope Resolved Metabolomics Uncovers Dynamic Biochemical Landscape Of Gut Microbiome-Host Organ Communications In Mice, Xia Xiao, Yixuan Zhou, Xinwei Li, Jing Jin, Jerika Durham, Zifan Ye, Yipeng Wang, Bernhard Hennig, Pan Deng

Animal and Food Sciences Faculty Publications

ackground Gut microbiome metabolites are important modulators of host health and disease. However, the overall metabolic potential of the gut microbiome and interactions with the host organs have been underexplored. Results Using stable isotope resolved metabolomics (SIRM) in mice orally gavaged with 13 C-inulin (a tracer), we first observed dynamic enrichment of 13 C-metabolites in cecum contents in the amino acids and short-chain fatty acid metabolism pathways. 13 C labeled metabolites were subsequently profiled comparatively in plasma, liver, brain, and skeletal muscle collected at 6, 12, and 24 h after the tracer administration. Organ-specific and time-dependent 13 C metabolite enrichments …

A Cooperative Study Assessing The Effects Of A Second Iron Injection Administered Before Weaning On Growth Performance, Hematological Status, And Tissue Mineral Concentrations Of Nursery Pigs*, Tyler Chevalier, O. Adeola, S. D. Carter, C. R. Dove, M. J. Estienne, C. L. Levesque, C. V. Maxwell, T. Tsai, Merlin D. Lindemann

Animal and Food Sciences Faculty Publications

Objective: A study involving 7 experiment stations evaluated the effects of a second iron injection administered before weaning on growth and hematological measures of pigs.

Materials and Methods: Pigs (n = 514) were given an iron injection (100–200 mg) on the first day of life. Piglets were then allotted to pairs of similar-weight, samesex siblings 3 to 5 d before weaning (on d 18–24) with one piglet from each pair receiving a second iron injection. All pigs received common station-specific postweaning diets. Data were subjected to ANOVA with the model containing the terms treatment, station, pair within station, and treatment …

Conceptualizing The Real And Perceived Risk Factors For Household Solar Pv Investment On Energy Transition Agenda, Syed Quaid Ali Shah, Lai Fong Woon, Ariff Bahruddin, Muhammad Kashif Shad

ASEAN Journal on Science and Technology for Development

The value of electricity produced via solar technologies has increased rapidly over the past decade. This brings along an enormous possibility to generate a substantial share of the world’s energy demand, in tandem with pushing aggressive efforts to cut down carbon emissions. Distributed solar technology, such as the residential solar photovoltaic (PV) system has been acknowledged to be of significant potential. Nevertheless, realizing this potential will require overcoming economic and social barriers to get private individuals to invest in their households. As such, this paper aims to discuss the role of residential investors’ real risk and perceived risk toward investors’ …

The Genetic Diversity Of An Endangered Buttercup, Ranunculus Triternatus, Ryan Garcia

All Graduate Projects

Ranunculus triternatus, a rare endemic species of the Columbia River Gorge, faces conservation challenges due to its limited range and fragmented populations. This study assesses the genetic diversity of R. triternatus and compares it with its widespread congener, Ranunculus glaberrimus, using inter-primer binding site (iPBS) markers. Genetic data from 80 individuals across eight populations were analyzed using Nei’s genetic diversity, Shannon’s diversity index, and AMOVA. Results showed R. triternatus had higher genetic diversity than western populations of R. glaberrimus, with eastern populations of R. glaberrimus displaying greater diversity than western ones. PCA, UPGMA, and STRUCTURE analysis revealed …

Differences In Urine Creatinine And Osmolality Between Black And White Americans After Accounting For Age, Moisture Intake, Urine Volume, And Socioeconomic Status, Patrick B. Wilson, Ian P. Winter, Josie Burdin

Exercise Science Faculty Publications

Urine osmolality is used throughout research to determine hydration levels. Prior studies have found black individuals to have elevated urine creatinine and osmolality, but it remains unclear which factors explain these findings. This cross-sectional, observational study sought to understand the relationship of self-reported race to urine creatinine and urine osmolality after accounting for age, socioeconomic status, and fluid intake. Data from 1,386 participants of the 2009–2012 National Health and Nutrition Examination Survey were utilized. Age, poverty-to-income ratio (PIR), urine flow rate (UFR), fluid intake, estimated lean body mass (LBM), urine creatinine, and urine osmolality were measured. In a sex-specific manner, …

Maxent Ecological Niche Models For Alternanthera Philoxeroides, Amynothrips Andersoni, And Agasicles Hygrophila, Samuel A. Schmid, Andrés F. Sánchez-Restrepo, Alejandro J. Sosa, Gray Turnage, Gary N. Ervin

CAS Publications

Alternanthera philoxeroides is an aquatic invasive weed from South America with a long history of biological control. The well-studied Agasicles hygrophila (alligatorweed flea beetle) successfully controls Al. philoxeroides in some parts of its invaded range, but Ag. hygrophila is unsuitable in other areas due to its intolerance to cold temperatures. An understudied biological control agent, Amynothrips andersoni (alligatorweed thrips) has shown greater tolerance to cold temperatures, but no research has been conducted to determine its ecological niche with respect to Al. philoxeroides. Additionally, climate change is predicted to shift the ecological niches of species globally, and these changes must be …

Strategic Nutritional Interventions With Probiotics And Their Relationship To Performance, Feeding Behavior, And Reticulorumen Environment In Cows And Calves Under Subacute Ruminal Acidosis Risk, Gustavo Mazon Correa Alves

Theses and Dissertations--Animal and Food Sciences

Subacute ruminal acidosis (SARA) is a digestive disorder in ruminants characterized by extended periods of low reticulorumen pH. This digestive disorder is commonly observed in ruminants fed diets with elevated proportions of non-fibrous carbohydrates. This disorder has been vastly studied in adult dairy cattle and has been associated with losses in milk production, changes in feeding behavior, damage to the gastrointestinal tract, and premature culling. Although vastly studied in adult cattle, there is limited research on the effects of SARA in calves. SARA might be prevented by modifying the reticulorumen environment with probiotic supplements containing lactateutilizing bacteria such as Megasphaera …

Swimming: A Great Decision And An Even Better Journey, Eva M. Hunnius

Emerging Writers

Swimming is loved, feared, and cherished by so many around the world. People love it because it gives them a sense of freedom and peace, while also receiving a great workout. Some may fear it because they do not know how to swim, or they feel like there are many dangers and risks to swimming. Others cherish it because it is the only sport they have ever known. In my case, swimming is one of the only things that has been with me since I was a little kid. This remains true for many athletes. In this discussion, I hope …

Assessing Lipid Composition Of Cell Membrane In Escherichia Coli Under Aerobic And Anaerobic Conditions, Isabelle Johnson

Undergraduate Theses, Professional Papers, and Capstone Artifacts

Escherichia coli is a highly studied model organism that is tightly tied to the mammalian gastrointestinal system. This microorganism has the capability to be a beneficial gut microbe or a life-threatening pathogen. In this study, the lipid membrane of Escherichia coli was investigated using Matrix-Assisted Laser Desorption/Ionization-Time of Flight Mass Spectrometry (MALDI-TOF MS) to observe the change in its composition in aerobic and anaerobic conditions. Evidence of desaturation was discovered in the spectra, though more investigation is needed to understand the metabolic processes and drives that result in this change. Elucidation of these pathways in the future could result in …

Exploring The Impact Of Invasive On Grassland Diversity: A Study In Montana, Ella Gaffney

Undergraduate Theses, Professional Papers, and Capstone Artifacts

For the capstone project with the University of Montana Davidson Honors College, I investigated the diversity index of grassland and rangeland plots across the state of Montana. My study, conducted from June to August 2023, includes data collected by my team. The purpose of this research project was testing the hypothesis that the diversity index decreases in plots containing invasive grass species.

During the summer of 2023, the Spatial Analysis Lab surveyed over 1000 plots in rangelands and grasslands across the state of Montana to locate an invasive grass, Ventenata dubia. Data collected includes species identification, ocular estimates of …

A Road Map For Place Based Collaboration For Conflict Reduction, Joseph L. Zecher

Undergraduate Theses, Professional Papers, and Capstone Artifacts

No abstract provided.

Creation Of A Digital Storage System For Genome Sequencing Metadata, Jacquelin W. Olexa

Undergraduate Theses, Professional Papers, and Capstone Artifacts

As the field of computational genomics continues to expand in both potential and application, it is now more imperative than ever to ensure that massive genetic sequencing datasets are properly stored in an accessible manner. This project sought to establish a practical, user-friendly, secure system for a genomics research lab (the Good Lab; thegoodlab.org) at the University of Montana. A MySQL database and connected web application was ruled the best configuration to maximize utility and accessibility for the lab’s researchers. Building the logical framework for the database, creating the server, and sourcing data occurred over several months. The dataset ranged …

Male Beetle Courtship Dance Analysis By Deeplabcut Technology, Andrea Newbrough

Undergraduate Theses, Professional Papers, and Capstone Artifacts

No abstract provided.

Microbiological Investigation Of Local Native Clays And Samples From The Scripps Ceramic Studio, Kelly Fuller

Scripps Senior Theses

This study explores the relationship between microorganisms and clay using samples currently being utilized in the Lincoln Ceramics Studio at Scripps College. Clay science spans disciplines, from geology and soil science to industrial material development and artistic practices. Although biological processes have been thought to effect clay properties such as plasticity and malleability, the interplay between microorganisms and clay minerals has not been thoroughly investigated in the scientific community. Drawing from diverse disciplines, this research investigates the microbial ecology of clay bodies to unveil potential innovations in ceramics production. In this experiment, colony-forming unit (CFU) assays were performed in both …