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Articles 1 - 30 of 1038
Full-Text Articles in Life Sciences
New Westernmost Record Of Jansen’S Goatfish, Parupeneus Jansenii (Mulli-Dae) From Indian Coastal Waters, Yosuva Mariasingarayan, Gopalan Mahadevan, Jeyapragash Danaraj, Mohanchander Ponnuvel
New Westernmost Record Of Jansen’S Goatfish, Parupeneus Jansenii (Mulli-Dae) From Indian Coastal Waters, Yosuva Mariasingarayan, Gopalan Mahadevan, Jeyapragash Danaraj, Mohanchander Ponnuvel
Makara Journal of Science
In July 2023, five individuals of Parupeneus jansenii were collected from the Parangipettai landing center, south-eastern India (Bay of Bengal). The standard length ranged from 140 to 150 mm, and two females and three males were recorded. This study confirms the first distributional record and the westernmost valid occurrence of this species in Indian coastal waters. P. jansenii significantly differs from P. heptacanthus in having fewer pectoral fin rays, more gill rakers on the upper limb, and 27 lateral line scales. Compared with P. angulatus, P. jansenii has a shallower body, a shallower caudal peduncle, a shorter snout, a …
Genomic Analysis Reveals New Subspecies Of Cercyonis Scudder, 1875 (Nymphalidae: Satyrinae: Satyrini), Jing Zhang, Qian Cong, Jinhui Shen, Leina Song, Todd L. Stout, Michael S. Fisher, Robb Hannawacker, Nick V. Grishin
Genomic Analysis Reveals New Subspecies Of Cercyonis Scudder, 1875 (Nymphalidae: Satyrinae: Satyrini), Jing Zhang, Qian Cong, Jinhui Shen, Leina Song, Todd L. Stout, Michael S. Fisher, Robb Hannawacker, Nick V. Grishin
The Taxonomic Report of the International Lepidoptera Survey
Genomic analysis of Cercyonis (Cercyonis) Scudder, 1875 (Nymphalidae Rafinesque, 1815) partitions the subgenus into three species groups and reveals five new subspecies from the USA (type localities in parentheses): Cercyonis (Cercyonis) pegala koosharem Stout and Grishin, ssp. n. (Utah, Sevier Co.), Cercyonis (Cercyonis) pegala lasala Grishin, M. Fisher, and Hannawacker ssp. n. (Utah, Grand Co.), Cercyonis (Cercyonis) pegala hortoni Grishin, ssp. n. (Arizona, Gila Co.), Cercyonis (Cercyonis) meadii maculana Grishin, ssp. n. (Colorado, Montezuma Co.), and Cercyonis (Cercyonis) meadii rimana Grishin, ssp. n. (Arizona, Yavapai Co.). A neotype is designated for Satyrus boopis Behr, 1864 (USA, California, Contra Costa Co.). …
Genomic Investigation Of Population Structure In A Secretive, Semi‐Fossorial Snake (Colubridae: Tropidoclonion Lineatum) Across The Great Plains, Taylor Probst, Cameron D. Siler, Drew R. Davis
Genomic Investigation Of Population Structure In A Secretive, Semi‐Fossorial Snake (Colubridae: Tropidoclonion Lineatum) Across The Great Plains, Taylor Probst, Cameron D. Siler, Drew R. Davis
School of Integrative Biological & Chemical Sciences Faculty Publications
With advances in genomic technologies, it has become increasingly feasible to generate large numbers of loci to address population genetic and phylogeographic questions. Nevertheless, many widespread and relatively abundant species remain unsampled using molecular approaches. The lined snake ( Tropidoclonion lineatum ), a semi‐fossorial snake distributed across the Great Plains, is one such example. Despite the historical recognition of multiple subspecies based on noted variation in morphological characters, no formal molecular investigation of population structure has been conducted to date due to a paucity of vouchered genetic samples. Here, we present the first genomic assessment of range‐wide population structure in …
Integrative Taxonomic Analysis Of Cryptic Species Diversity In The Spiny Witch-Hazel Gall Aphid, Hamamelistes Spinosus (Hemiptera: Aphididae: Hormaphidini) In Eastern North America, Gavin Andrew Powell Munson
Integrative Taxonomic Analysis Of Cryptic Species Diversity In The Spiny Witch-Hazel Gall Aphid, Hamamelistes Spinosus (Hemiptera: Aphididae: Hormaphidini) In Eastern North America, Gavin Andrew Powell Munson
All Graduate Theses and Dissertations, Fall 2023 to Present
Taxonomy is the practice of identifying, classifying and categorizing species, providing structure for the vast diversity of life. Aphids are an ecologically important group of soft-bodied insects, but they can be difficult to identify because of their tiny anatomical size, reduced or simplified morphological features, and morphological variation within a single species across different generations. In this study, the taxonomy of the spiny witch-hazel gall aphid, Hamamelistes spinosus, is revised. The complex multi-generational life cycle of the aphids, which alternates between witch-hazel and birch trees, has led to confusion regarding past descriptions. Scientists in the late 1800s who were …
Unveiling The Diversity Within Salvia Caespitosa Sensu Lato (Lamiaceae): Three New “Hidden” Endemic Species From Türkiye, Ferhat Celep, Musa Doğan, Gali̇p Akaydin, Ahmet Kahraman, Ersi̇n Karabacak, Ömer Çeçen, Meti̇n Armağan, Chun-Lei Xiang, Bryan T. Drew
Unveiling The Diversity Within Salvia Caespitosa Sensu Lato (Lamiaceae): Three New “Hidden” Endemic Species From Türkiye, Ferhat Celep, Musa Doğan, Gali̇p Akaydin, Ahmet Kahraman, Ersi̇n Karabacak, Ömer Çeçen, Meti̇n Armağan, Chun-Lei Xiang, Bryan T. Drew
Turkish Journal of Botany
Documenting species, particularly those that are threatened or endangered, is fundamental to biodiversity conservation. However, many taxa remain scientifically unrecognized, being either undiscovered or unpublished. While some plants can be easily recognized as new species, other identifications are obscured by morphological, taxonomic, and nomenclatural complexity. Detecting cryptic or “hidden” species is therefore essential to understanding biodiversity and plant evolution. Our revisionary studies on Salvia demonstrate that the morphologically complex Salvia caespitosa is not a single species but instead comprises at least four distinct species, three with narrow distributions. This conclusion is supported by integrative evidence from extensive field studies, herbarium …
A New Species Of The Genus Heracleum From Türkiye: H. Papilionaceum (Apiaceae: Tordyliaea), Mehmet Sağiroğlu, Mardiya Sabdani̇, Bariş Bani̇, Hayri̇ Duman
A New Species Of The Genus Heracleum From Türkiye: H. Papilionaceum (Apiaceae: Tordyliaea), Mehmet Sağiroğlu, Mardiya Sabdani̇, Bariş Bani̇, Hayri̇ Duman
Turkish Journal of Botany
A new species, Heracleumpapilionaceum (Apiaceae: Tordylieae), is described and illustrated from the Elmacık Mountains, Bolu Province, northwestern Türkiye. Morphological studies and phylogenetic analyses based on nuclear ribosomal (nr)DNA Internal Transcribed Spacer sequences placed the new species close to H. apiifolium and H. munzurense. Comparative morphological and fruit anatomical data, images, and a distribution map are provided. An International Union for Conservation of Nature Red List assessment is also presented, supporting its classification as Critically Endangered.
Integrative Data Inform The Taxonomy Of Salix: A Case Study Of S. Purpurea L. Subsp. Leucodermis Yalt. (Salicaceae) From Türkiye, Peli̇n Acar, Yasi̇n Kaya, Dudu Özlem Mavi̇ İdman, Irina V. Belyaeva
Integrative Data Inform The Taxonomy Of Salix: A Case Study Of S. Purpurea L. Subsp. Leucodermis Yalt. (Salicaceae) From Türkiye, Peli̇n Acar, Yasi̇n Kaya, Dudu Özlem Mavi̇ İdman, Irina V. Belyaeva
Turkish Journal of Botany
The study of endemic species provides valuable perspectives on evolutionary history and future targets for their conservation. Salix purpurea L. subsp. leucodermis Yalt., which is endemic to Sandras Mountain in Türkiye, was analysed using morphological, anatomical, and genomic methods. This study presents the first draft short-read sequence of S. purpurea subsp. leucodermis, providing preliminary genomic evidence of differentiation from related taxa. This study also revealed a specific combination of anatomical features (prominent calcium oxalate crystals and amphistomatous leaves) and morphological characteristics (striated wood, glabrous buds, absence of stipules) that differentiate the taxon in question from the closely related species S. …
Systematic Implications Of Seed Morphology In Oxytropis (Galegeae: Fabaceae) From Pakistan, Amjad Khan, Amir Sultan, Raees Khan, Rozina Rozina, Shahab Ali, Ali Bagheri, Rifat Ullah Khan, Abdul Samad Mumtaz, Tariq Ullah, Ghalia Saleem Aljeddani, Hasil Khan
Systematic Implications Of Seed Morphology In Oxytropis (Galegeae: Fabaceae) From Pakistan, Amjad Khan, Amir Sultan, Raees Khan, Rozina Rozina, Shahab Ali, Ali Bagheri, Rifat Ullah Khan, Abdul Samad Mumtaz, Tariq Ullah, Ghalia Saleem Aljeddani, Hasil Khan
Turkish Journal of Botany
Oxytropis is a taxonomically challenging genus within the tribe Galegeae of the family Fabaceae. Despite its systematic importance, the seed morphology of Oxytropis has been poorly investigated. In the present study, we examined the seed morphology of 18 Oxytropis species representing 10 sections from the Pakistan, with the aim of evaluating the diagnostic value of seed traits using both light and scanning electron microscopy. The current investigation revealed two distinct seed shapes, namely cordiform and prolonged reniform, across the studied taxa. Seed length ranged from 1.75 mm in O. crassiuscula to 2.3 mm in O. duthieana, while seed width varied …
Butterfly Taxa Discovery Via Genomic Analysis, Jing Zhang, Qian Cong, Jinhui Shen, Leina Song, Nick V. Grishin
Butterfly Taxa Discovery Via Genomic Analysis, Jing Zhang, Qian Cong, Jinhui Shen, Leina Song, Nick V. Grishin
The Taxonomic Report of the International Lepidoptera Survey
Expanding a genomics-guided assessment of butterfly taxonomy, we integrate phylogenetic evidence from all protein-coding genes with morphological considerations to refine our understanding of butterfly systematics and discover new taxa. As a result, 2 subgenera, 39 species, and 5 subspecies are proposed as new (type species in original combinations or type localities are listed in parentheses): Erebia (Magda) magdalena uintana Grishin, ssp. n. (USA: Utah, Uintah Co.) in Nymphalidae Rafinesque, 1815; Myselasia rondea Grishin, sp. n. (Brazil: Rondônia), Myselasia pseudocrinon Grishin, sp. n. (Ecuador: Pastaza), Myselasia paramatuta Grishin, sp. n. (Ecuador: Morona-Santiago), Euselasia anapellos Grishin, sp. n. (Peru: Loreto), …
Investigating The Taxonomic Uncertainties Of Potentilla Rupincola, Natalie Elizabeth Hieber
Investigating The Taxonomic Uncertainties Of Potentilla Rupincola, Natalie Elizabeth Hieber
Master's Theses
Landscape stewardship is an integral role for land managers that becomes more important when rare or endangered species occur within managed areas. Conservation across the landscape is a primary concern for land managers, but resources allocated for conservation can be limited due to many competing goals. Taxonomic uncertainty surrounding rare and endangered taxa, particularly plant taxa, that have historically been classified solely using morphological features further complicates conservation planning. One such taxon is Potentilla rupincola, a rare plant endemic to the eastern Rocky Mountains in Colorado. For over a century, botanists have debated whether P. rupincola is a distinct species …
Leveraging Historic Collections: Investigating Morphometric Differentiation In Members Of The Arisaema Triphyllum (L.) Schott (Araceae) Species Complex, Morgan Bradley Russell
Leveraging Historic Collections: Investigating Morphometric Differentiation In Members Of The Arisaema Triphyllum (L.) Schott (Araceae) Species Complex, Morgan Bradley Russell
Graduate Theses and Dissertations
The Jack-in-the-pulpit (Arisaema triphyllum (L.) Schott) is an herbaceous perennial herb of North America, and its taxonomic history is full of confusion and rank shifts. Now split into six species, the A. triphyllum species complex consists of morphologically similar taxa that have differing ploidy levels. In Chapter I, I compiled a detailed introduction and history for these taxa, focusing on their taxonomic complexity and morphological ambiguity in herbarium specimens and immature plants. I also presented their ploidy distinctions and how the implications of polyploidy may hold answers to parsing them apart, especially in dried herbarium specimens where defining characteristics are …
Unravelling Taxonomic Complexity In Elusive Cetaceans: Mitogenome Insights Into Evolutionary History And Cryptic Diversity Of Bryde's Whales, Dominique Paynee, Paulette Bloomer, Gwenith Penry, Simon Elwen, Ada Natoli, Vaisakh Dhanalakshmy, Thyago Cardoso, Els Vermeulen
Unravelling Taxonomic Complexity In Elusive Cetaceans: Mitogenome Insights Into Evolutionary History And Cryptic Diversity Of Bryde's Whales, Dominique Paynee, Paulette Bloomer, Gwenith Penry, Simon Elwen, Ada Natoli, Vaisakh Dhanalakshmy, Thyago Cardoso, Els Vermeulen
All Works
Cetaceans, despite their ability to cross wide distances, enabling mostly high levels of gene flow, can develop unique genetic lineages driven by variations in life-history traits, diverse migratory routes and local adaptation, complicating taxonomy and delineation of conservation units. Comprehensive genetic data are essential to overcome the challenges of obtaining suitable sample sizes from wild cetaceans while untangling cryptic species diversity. The Bryde's whale (Balaenoptera edeni) has a complicated discovery and taxonomic history that hinders accurate conservation assessments. In southern Africa, two populations are recognised: the inshore (SAi) and the offshore southeast Atlantic population (SEA). This study examines their phylogenetic …
Cryptic Diversity Within Nyctixalus (Anura: Rhacophoridae): A New Species, A Resurrection, And A Redescription, Jennifer Dever, Jimmy A. Mcguire, Djoko T. Iskandar, Amir Hamidy, Lee L. Grismer
Cryptic Diversity Within Nyctixalus (Anura: Rhacophoridae): A New Species, A Resurrection, And A Redescription, Jennifer Dever, Jimmy A. Mcguire, Djoko T. Iskandar, Amir Hamidy, Lee L. Grismer
Biology Faculty Publications
The examination of molecular markers confirms hidden diversity and reveals a new species within the Nyctixalus pictus (Peters, 1871) complex. Three genetically distinct clades were recovered: one from the Thai-Malay Peninsula; one from Sumatra, Indonesia; and one from Sarawak, Borneo, East Malaysia. Voucher specimens from each region were compared, and significantly different mean values were found through morphological analyses. The populations also differ significantly in morphospace, as determined by PCA, DAPC, and MFA analyses. The Thai-Malay Peninsula individuals have a distinct, rounded and slightly elongated snout shape compared to the other two clades. Based on these combined data, these three …
Three Butterfly Genera Across The Central Texas Suture Zone, Qian Cong, Jing Zhang, Jinhui Shen, Leina Song, Nick V. Grishin
Three Butterfly Genera Across The Central Texas Suture Zone, Qian Cong, Jing Zhang, Jinhui Shen, Leina Song, Nick V. Grishin
The Taxonomic Report of the International Lepidoptera Survey
Genome-scale analyses of butterfly specimens across the Central Texas Suture Zone revealed that several taxa currently treated as subspecies exhibit genomic differentiation similar to that observed between species. Further investigation and genomic sequencing of additional specimens from across the ranges of these taxa support this conclusion and result in the following changes to nomenclature and taxonomy. Two new subspecies of Nymphalidae Rafinesque, 1815 are described: Asterocampa louisa monterra Grishin, ssp. n. (type locality in Mexico: Nuevo León) and Asterocampa clyton plana Grishin, ssp. n. (type locality in USA: Texas, Denton Co.). The following taxa are recognized as species, not subspecies: …
A Taxonomic Overview Of The Apodemia Mormo Complex From A Genomic Perspective, Jing Zhang, Qian Cong, Jinhui Shen, Leina Song, Nick V. Grishin
A Taxonomic Overview Of The Apodemia Mormo Complex From A Genomic Perspective, Jing Zhang, Qian Cong, Jinhui Shen, Leina Song, Nick V. Grishin
The Taxonomic Report of the International Lepidoptera Survey
Genomic analysis of the Apodemia mormo group (Riodinidae Grote, 1895 (1827)) specimens across the range from southwestern Canada through much of the western USA and northwestern Mexico, complemented by phenotypic examination and photographs of live individuals to inspect eye color, partitions the complex into eight species, one of which is proposed as new: Apodemia (Apodemia) apache Grishin, sp. n. (type locality in USA: Arizona, Apache Co.), and three elevated from subspecies of A. mejicanus: Apodemia (Apodemia) maxima (Weeks, 1891), stat. rest., Apodemia (Apodemia) deserti W. Barnes & McDunnough, 1918, stat. nov., and Apodemia ( …
Taxonomic Significance Of Stem And Leaf Anatomy And Pollen And Seed Micromorphological Characters In The Papaver (Poppy) Sect. Rhoeadium From Türkiye, Esengül Özkaymakoğlu, Osman Tugay, Yavuz Bülent Köse, Deni̇z Ulukuş, Bayram Atasagun, Meti̇n Armağan, Ferhat Celep
Taxonomic Significance Of Stem And Leaf Anatomy And Pollen And Seed Micromorphological Characters In The Papaver (Poppy) Sect. Rhoeadium From Türkiye, Esengül Özkaymakoğlu, Osman Tugay, Yavuz Bülent Köse, Deni̇z Ulukuş, Bayram Atasagun, Meti̇n Armağan, Ferhat Celep
Turkish Journal of Botany
The poppy (Papaver) has beautiful flowers that attract the attention of not only taxonomists but also the public. However, it also presents several taxonomic problems. This study examines 13 taxa of Papaver sect. Rhoeadium, including the following species native to Türkiye: P. purpureomarginatum, P. dubium subsp. dubium, P. dubium subsp. laevigatum, P. arachnoideum, P. arenarium, P. commutatum subsp. euxinum, P. guerlekense, P. rhopalothece, P. stylatum, P. clavatum, P. syriacum, P. rhoeas, and P. postii. Plant specimens were collected from natural populations, and anatomical investigations were carried out on stem and leaf cross-sections. Pollen and seed features were examined using both …
Update To: New Butterfly Taxa And Findings From Genomic Analyses, Jing Zhang, Qian Cong, Jinhui Shen, Leina Song, Nick V. Grishin
Update To: New Butterfly Taxa And Findings From Genomic Analyses, Jing Zhang, Qian Cong, Jinhui Shen, Leina Song, Nick V. Grishin
The Taxonomic Report of the International Lepidoptera Survey
Due to the United States government shutdown, GenBank services were unavailable, and accession numbers could not be obtained for the sequences reported in the original publication. This update provides the GenBank accession numbers for these sequences, together with additional taxonomic findings accumulated since the initial study. One genus, 16 species and four subspecies are proposed as new (type species or localities in parentheses): Madaga Grishin, gen. n. (Artitropa alaotrana Oberthür, 1916), Udranomia eurianus Grishin, sp. n. (Ecuador: Napo), Entheus dalina Grishin, sp. n. (Brazil: Pará), Entheus ambo Grishin, sp. n. (Colombia: Cauca), Entheus pico Grishin, sp. n. (Colombia: Valle …
An Update On Novel Taxa And Revised Taxonomic Status Of Bacteria Isolated From Human Clinical Specimens Described In 2024, Arianna Carella, Karen C. Carroll, Erik Munson
An Update On Novel Taxa And Revised Taxonomic Status Of Bacteria Isolated From Human Clinical Specimens Described In 2024, Arianna Carella, Karen C. Carroll, Erik Munson
Clinical Lab Sciences Faculty Research and Publications
Knowledge of novel and revised bacterial taxonomy facilitates routine operations in the medical microbiology laboratory and communication with important stakeholders. Notable new gram-positive taxa accepted in 2024 include the clinically significant Staphylococcus brunensis sp. nov., as well as Streptococcus suis subsp. hashimotonensis subsp. nov., which can be delineated from other Streptococcus suis subsp. by possession of the Lancefield group A antigen. Four novel Enterobacterales species are discussed, plus a novel eighth family Gallaecimonadaceae. One of these, Providencia huashanensis sp. nov. is clinically significant and harbors multiple genetic determinants that encode antimicrobial resistance mechanisms. Stenotrophomonas forensis sp. nov., derived from …
Addressing Controversy In Fusobacterium Nomenclature: What Exactly Does “F Nucleatum” Refer To?, Martha A Zepeda-Rivera, Floyd E Dewhirst, Susan Bullman, Christopher D Johnston
Addressing Controversy In Fusobacterium Nomenclature: What Exactly Does “F Nucleatum” Refer To?, Martha A Zepeda-Rivera, Floyd E Dewhirst, Susan Bullman, Christopher D Johnston
Faculty, Staff and Student Publications
The F. nucleatum group (sensu lato) is historically composed of four subspecies (F. nucleatum subsp. animalis, F. nucleatum subsp. nucleatum, F. nucleatum subsp. polymorphum, F. nucleatum subsp. vincentii). Although F. nucleatum sensu lato members are typically associated with oral disease, they have recently been shown to disseminate to the gastrointestinal tract and are associated with adverse health conditions such as inflammatory bowel disease and colorectal cancer (CRC). A growing debate over the nomenclature applied to Fusobacterium taxonomy has resulted in different names for these lineages, shifting them from their historic subspecies designations to …
Nepenthes Megastoma (Nepenthaceae), A Micro-Endemic Pitcher Plant From Puerto Princesa Subterranean River National Park, Palawan, Philippines, John Charles A. Altomonte, John Paul R. Collantes, Vernaluz Mangussad, Rene Alfred Anton Bustamante, Alastair S. Robinson
Nepenthes Megastoma (Nepenthaceae), A Micro-Endemic Pitcher Plant From Puerto Princesa Subterranean River National Park, Palawan, Philippines, John Charles A. Altomonte, John Paul R. Collantes, Vernaluz Mangussad, Rene Alfred Anton Bustamante, Alastair S. Robinson
Environmental Science Faculty Publications
Nepenthes megastoma is described and illustrated as a new species from the Puerto Princesa Subterranean River National Park, a UNESCO World Heritage Site in Palawan Philippines. This carnivorous tropical pitcher plant is currently known from just three locations in the Mount Saint Paul karst formation, where it grows on vertical limestone walls. Morphologically, N. megastoma is characterised by its highly branched stems, campanulate pitchers, peltate tendril exsertion, dimorphic upper pitchers, and unidirectionally upturned female flowers. It is assessed as Critically Endangered under the IUCN Red List criteria, based on its restriction to three subpopulations comprising few total individuals. Pitcher morphology …
New Butterfly Taxa And Findings From Genomic Analyses, Jing Zhang, Qian Cong, Jinhui Shen, Leina Song, Nick V. Grishin
New Butterfly Taxa And Findings From Genomic Analyses, Jing Zhang, Qian Cong, Jinhui Shen, Leina Song, Nick V. Grishin
The Taxonomic Report of the International Lepidoptera Survey
Continuing our genomics-driven exploration of butterfly taxonomy, we integrate phylogenetic trees from all protein-coding genes with existing taxonomic and phenotypic knowledge and uncover further insights into butterfly systematics. As a result, one subgenus, 44 species, and 11 subspecies are proposed as new (type species in original combinations or type localities are listed in parentheses): Porphaurea Grishin, subgen. n. (Phoenicops porphyropis Meyrick & Lower, 1902) of Chaetocneme C. Felder, 1860 in Hesperiidae Latreille, 1809; Dione (Agraulis) lamasi Grishin, sp. n. (Peru: Cuzco) in Nymphalidae Rafinesque, 1815; Lasaia (Lasaia) chiapis Grishin, sp. n. (Mexico: Chiapas), Lasaia …
A Standard-Based Taxonomy Of Features That Affect User Response To Clinical Decision Support Alerts, Siru Liu, Allison B Mccoy, Dean F Sittig, Josh F Peterson, Thomas A Lasko, Adam Wright
A Standard-Based Taxonomy Of Features That Affect User Response To Clinical Decision Support Alerts, Siru Liu, Allison B Mccoy, Dean F Sittig, Josh F Peterson, Thomas A Lasko, Adam Wright
Faculty, Staff and Student Publications
Objective: The objective of this work is to develop a standard-based taxonomy of features that might affect user response to alerts using evidence from literature and public alert logic repositories.
Methods: We developed a taxonomy of features using multiple sources: (1) the Agency for Healthcare Research and Quality (AHRQ) CDS Connect Repository, (2) alert logic from commercial electronic health record (EHR) customers, and (3) published literature. Three categories (patient, provider, environment/context) were used a priori to develop the taxonomy. The final taxonomy was mapped to the Fast Healthcare Interoperability Resources (FHIR) standard for development of standardized CDS services.
Results: Aggregating …
Update On Novel, Validly Published, And Included Bacterial Taxa Derived From Nondomestic Animals And Taxonomic Revisions Published In 2024, Claire R. Burbick, Sara D. Lawhon, Trinity Krueger, Elena Ruiz-Reyes, Mallory Lenmark, Ayden Wisney-Leonard, Erik Munson
Update On Novel, Validly Published, And Included Bacterial Taxa Derived From Nondomestic Animals And Taxonomic Revisions Published In 2024, Claire R. Burbick, Sara D. Lawhon, Trinity Krueger, Elena Ruiz-Reyes, Mallory Lenmark, Ayden Wisney-Leonard, Erik Munson
Clinical Lab Sciences Faculty Research and Publications
Description of new and revised taxa originating from non-domestic animal species continues to be pursued. The majority are bacteria isolated from the alimentary system of a variety of healthy wildlife, adding to our understanding of microbial flora present in the normal state. A few new and revised taxa are associated with disease, including a novel Erysipelothrix species associated with sepsis in albatross and a revised species, Allocoenonia anatina comb. nov., associated with Riemerella anatipestifera-like disease in ducks and geese. Representative bacteria from genera that are additionally under study for the remediation of pollutants and bacteria that are related to …
Valid And Accepted Novel Bacterial Taxa Isolated From Domestic Companion And Agricultural Animals Described In 2024, Sara D. Lawhon, Claire R. Burbick, Trinity Krueger, Elena Ruiz-Reyes, Ayden Wisney-Leonard, Mallory Lenmark, Erik Munson
Valid And Accepted Novel Bacterial Taxa Isolated From Domestic Companion And Agricultural Animals Described In 2024, Sara D. Lawhon, Claire R. Burbick, Trinity Krueger, Elena Ruiz-Reyes, Ayden Wisney-Leonard, Mallory Lenmark, Erik Munson
Clinical Lab Sciences Faculty Research and Publications
Recognizing and updating bacterial names is key to communication between the veterinary clinical microbiology laboratory, veterinarians, and clients. Moraxella oculi sp. nov., distinct from Moraxella bovis and Moraxella bovoculi, was isolated from a cow with infectious bovine keratoconjunctivitis. Several respiratory pathogens were recognized, including Neisseria leonii sp. nov. described from rabbits, Mannheimia indoligenes sp. nov. described from cattle in Europe, and Moraxella haemolytica sp. nov. described from a goat in China. Stenotrophomonas forensis sp. nov. is a novel designation within the Stenotrophomonas maltophilia complex associated with isolates derived from horses. New additions to the Campylobacter genus included Campylobacter californiensis …
Comparative Pollen Morphology Of The Genus Rhaponticoides Vaill. (Asteraceae) In Türkiye: Implications For Taxonomy And Phylogeny, Foroogh Tavakoli, Gürkan Semi̇z, Batikan Günal, Meryem Bozkurt, Tuna Uysal
Comparative Pollen Morphology Of The Genus Rhaponticoides Vaill. (Asteraceae) In Türkiye: Implications For Taxonomy And Phylogeny, Foroogh Tavakoli, Gürkan Semi̇z, Batikan Günal, Meryem Bozkurt, Tuna Uysal
Turkish Journal of Botany
The main focus of this research is the palynological investigation of Rhaponticoides Vaill. species naturally occurring in Türkiye. Light microscopy and scanning electron microscopy (SEM) were employed to examine the pollen morphology of nine Rhaponticoides species in detail. Hierarchical cluster analysis (HCA) was also conducted to identify closely related species and distinguish the investigated taxa based on palynological traits. The study found that the pollen grains were tricolporate, isopolar, monad, and radially symmetric, with an oblate-spheroidal shape as indicated by the polar/equatorial (P/E) ratio. The pollen measurements derived from the P/E ratio ranged between 0.85 and 1, values associated with …
Culturally Responsive Teaching: Identifying Conifers Through Science And Tradition, Madhav P. Nepal
Culturally Responsive Teaching: Identifying Conifers Through Science And Tradition, Madhav P. Nepal
iLEARN Teaching Resources
This lesson on plant taxonomy introduces students to the scientific system used to name, classify, and identify plant species, with a focus on conifer trees found in local environments. Students explore how observable traits—such as needle shape, cone structure, and bark texture—are used to group plants into categories that reflect their evolutionary relationships. Through a hands-on tree-walk activity, students use a simplified dichotomous key to identify at least five conifer species on or near school grounds. They then use digital plant ID tools to confirm their findings and compare traditional and modern identification methods. The lesson also emphasizes the hierarchical …
Phylogenetics And Integrative Taxonomy Of The Lang's Reed Frog Species Complex (Anura: Hyperoliidae: Hyperolius Langi), Dominic Troiani
Phylogenetics And Integrative Taxonomy Of The Lang's Reed Frog Species Complex (Anura: Hyperoliidae: Hyperolius Langi), Dominic Troiani
Open Access Theses & Dissertations
The genus Hyperolius (Rapp, 1842) is the most speciose amphibian genus in sub-Saharan Africa. The genus has a complex taxonomic history because of its extensive intraspecific and interspecific morphological variation, large geographic distribution of many taxa, gaps in sampling, and the discovery of significant cryptic diversity within many species. The goal of this study is to understand the relationships and taxonomy of Hyperolius langi via an integrative taxonomic approach that combines molecular, morphological, and bioacoustics data to clarify the systematics of the geographically widespread species Hyperolius langi. Two mitochondrial (16S and cyt b) and one nuclear (RAG1) gene were used …
Anatomical And Palynological Studies On Turkish Primula Taxa (Primulaceae) And Their Taxonomic And Phylogenetic Significance, Deni̇z Ulukuş, Esengül Özkaymakoğlu, Rebecca Stubbs, Hüseyi̇n Baykal, Kami̇l Coşkunçelebi̇, Osman Tugay, Barbara Keller, Elena Conti, Ferhat Celep
Anatomical And Palynological Studies On Turkish Primula Taxa (Primulaceae) And Their Taxonomic And Phylogenetic Significance, Deni̇z Ulukuş, Esengül Özkaymakoğlu, Rebecca Stubbs, Hüseyi̇n Baykal, Kami̇l Coşkunçelebi̇, Osman Tugay, Barbara Keller, Elena Conti, Ferhat Celep
Turkish Journal of Botany
Anatomical (scape, pedicel, leaf lamina, and leaf midrib) and pollen morphological features of 11 taxa belonging to the genus Primula subgen. Primula (P. vulgaris subsp. vulgaris, P. vulgaris subsp. rubra, and P.megaseifolia, P. meyeri,P. elatior subsp. pallasii, P. pseudoelatior, P. veris subsp. columnae, P. veris subsp. macrocalyx) and subgen. Aleurita (P. longipes, P. algida and P. auriculata) were examined using light and scanning electron microscopy to shed light on the existing taxonomic and phylogenetic relationships. The anatomical and palynological features of the majority of the taxa studied were revealed for the first time in this study. In anatomical studies, the …
Update To: Advancing Butterfly Systematics Through Genomic Analysis, Jing Zhang, Qian Cong, Jinhui Shen, Leina Song, Nick Grishin
Update To: Advancing Butterfly Systematics Through Genomic Analysis, Jing Zhang, Qian Cong, Jinhui Shen, Leina Song, Nick Grishin
The Taxonomic Report of the International Lepidoptera Survey
In this update, we propose (type species or type localities in parentheses): Lochris Grishin, nom. nov. (Lasaia oileus Godman, 1903; Lepidoptera: Riodinidae) as a new substitute name for Locris Grishin, 2025 preoccupied by Locris Stål, 1866 (Cercopis rubra Fabricius, 1794; Hemiptera: Cercopidae), 5 new species, and 5 new subspecies: Emesis (Mandania) mandarina Grishin, sp. n. (Brazil: Santa Catarina) and Emesis (Mandania) mandela Grishin, sp. n. (Venezuela, Carabobo) in Riodinidae Grote, 1895 (1827); others in Hesperiidae Latreille, 1809: Telegonus (Rhabdoides) flavifimbro Grishin, sp. n. (Colombia), Urbanus (Urbanoides) dolus Grishin, sp. n. (Colombia: …
Morphological Observations Of Ophioderma Hybridum (Echinodermata: Ophiuroidea) From Western Of Libya, Najla Mohamed Abushaala, Edris Mansour, Ignazio Sparacio, Abdulfattah Elfituri
Morphological Observations Of Ophioderma Hybridum (Echinodermata: Ophiuroidea) From Western Of Libya, Najla Mohamed Abushaala, Edris Mansour, Ignazio Sparacio, Abdulfattah Elfituri
Journal of King Abdulaziz University: Marine Science
The distribution of the species of Ophioderma in the Mediterranean is still incompletely known. In this paper, Ophioderma hybridum (Ophiuroidea, Ophiodermatidae) is reported for the first time from the coast of Tajura, in the southern Mediterranean Sea, Libya. This recently described species was until now known only from the coast of Tunisia. Description of external appearance and taxonomic characteristics: Specimens had a dark reddish brown body colour on disc and arms, the radial shields not covered by granules. As a result of these morphological observations, O. hybridum is added to the Ophiuroidea fauna of the Libyan coast, southern Mediterranean Sea, …