Life Sciences Commons^™

Machine Learning-Enabled Chemical Ecology For Integrated Pest Management: From Volatiles To Field Applications, Steve B.S. Baleba, Victor O. Omondi, Pascal Aigbedion-Atalor, Emmanuel Peter, Souleymane Diallo, Komi Mensah Agboka

All Peer-Reviewed Publications

Machine learning is transforming chemical ecology by accelerating the discovery and deployment of semiochemical-based tools for precision pest management. These advances are particularly important in the face of climate change, pesticide resistance, and the growing need for sustainable agricultural intensification. This review synthesizes how machine learning can be applied across the semiochemical discovery and implementation pipeline, from chemical signal detection to field deployment and decision support for integrated pest management. We review major machine learning approaches and demonstrate how they extract biologically relevant information from high-dimensional chemical, electrophysiological, behavioral, sensor, and field datasets. These methods accelerate semiochemical discovery, prioritize candidate …

Bees In The Trap: Leveraging Bumble Bee (Hymenoptera: Apidae: Bombus) Bycatch For Ecological And Genetic Insights, Tori L. Strausser

All Graduate Theses and Dissertations, Fall 2023 to Present

Managers rely on insect monitoring traps to detect insect pests that harm crops and protect food and other agricultural production. However, these traps also capture non-target insects, including bumble bees, raising concerns about whether repeated trapping could harm pollinator populations. This thesis explores whether bees caught as non-targets, also called bycatch, in routine pest monitoring traps can be used to better understand bumble bee populations, and whether traps pose risks to their long-term persistence. Using bumble bees collected from pest surveillance traps placed in crop fields across Utah, this research examined seasonal patterns in body size, timing of capture, and …

A Genetic Analysis Of The Rare Endemic Astragalus Ripleyi Barneby, Juan Antonio Jaramillo-Chico

Master's Theses

Astragalus ripleyi Barneby is a rare endemic species found in the San Luis Valley of the southern portions of the Rocky Mountains in Colorado and New Mexico. Though not federally listed as endangered, the species is on the Bureau of Land Management’s Sensitive Species List, warranting protection and continued management. This study aims to provide information about the genetic health of the species to inform conservation efforts and provide updated management recommendations. A genetic health analysis was conducted investigating the levels of diversity present in the species, how genetic diversity is structured across the known range of the species and …

Land Condition Standards For The Western Australian Nullarbor Pastoral Region, Peter-Jon A. Waddell, Wayne J. Fletcher

Natural resources published reports

This report outlines the quantitative land condition standards that define acceptable pastoral land condition for the Western Australian part of the Nullarbor, to meet the regulatory requirements of the Land Administration Act 1997 and the Soil and Land Conservation Act 1945.

The Department of Primary Industries and Regional Development is developing regional-level pastoral land condition standards for Western Australia as a critical component of the Framework for sustainable pastoral management – revised edition (Fletcher 2022), the purpose of which is to address the Office of the Auditor General’s recommendations to improve the management of pastoral lands in WA …

Effects Of Urbanization On Barrier Island Bobcats, Meghan P. Keating

All Dissertations

Urbanization is a leading driver of ecological change and presents unique challenges for carnivores by altering habitat availability, prey communities, and exposure to anthropogenic threats. Although many carnivore species persist in developed landscapes, the ecological and demographic consequences of urbanization often remain poorly understood, particularly over long timescales. Using one of the longest-running studies of a free-ranging carnivore population, I evaluated the effects of urbanization on the behavior, resource use, exposure risk, and population dynamics of bobcats (Lynx rufus) inhabiting a residentially developed barrier island in coastal South Carolina, USA. I first examined temporal and spatial responses to …

1 Billion Birds Lost: Mechanisms Of Window Collisions And Possible Mitigation Strategies At Lawrence University, Shoshana Schmit

Lawrence University Honors Projects

Windows are currently the largest killer of birds on the planet, with an estimated 1 billion birds dying from collisions annually. If birds that hit windows do not die on impact, they may either die elsewhere shortly afterwards, resulting in the number of carcasses at collision sites being a conservative estimate of the actual number of fatalities. During the day, proximity to foraging sites and reflectivity play crucial roles in the danger of windows, and during the night, artificial illumination emitting from windows disorients and inhibits navigational cues. To explore this topic on campus, I documented bird collisions at Lawrence …

Synergies Of Microecology And Macroecology Elicit Insights For Creation Care, David Warners, John T. Wertz

University Faculty Publications and Creative Works

This article reports on a collection of microecological and macroecological insights that emerged from extended conversations between Calvin University professors David Warners, a botanist concentrating in restoration ecology, and John Wertz, a micro-biologist specializing in microbial ecology. Classic descriptions of ecology identify biological interactions as happening at the ecosystem, community, or population level. And yet, ecological interactions are very much occurring at the microbial level as well. Furthermore, microbial-level interactions frequently influence the quality and character of macroecological relationships and vice versa. Allowing ecological principles to be applied across all life forms broadens our comprehension of interactions that are happening …

Exploring The Durability Of Marine Picocyanobacterial Microcolonies, Erik Swanson

University Honors Theses

Picocyanobacteria of the genus Synechococcus are widespread aquatic photoautotrophs that play essential roles in primary production and carbon cycling. Some Synechococcus strains form multicellular microcolonies, but the mechanisms of cell-to-cell attachments and structural durability of these microcolonies remain poorly understood. This research investigated the physical durability of microcolonies in two marine Synechococcus strains (CC9605 and CC9311) using physical disruption treatments. Cultures were subjected to vortexing and sonication treatments, and populations of single cells and microcolonies were quantified using flow cytometry based on differences in measures of size. Results indicated that strain CC9605 showed no significant treatment effect, whereas CC9311 displayed …

Productivity And Botanical Composition Response Of A Stabilized Pasture To Different Utilization Patterns, E Riveros, A Olivares

IGC Proceedings (1977-2023)

The effect of three different utilization patterns upon the productivity and botanical composition of typical natural pasture was studied during a year of growth. The trial consisted of cutting the swards of three plots of a natural pasture in a humid zone in the south of Chile when they reached an average height of 20 cm, leaving only a height of 5 cm. This process was carried out in three plots of 20 x 20 musing the following methods: plot 1, harvesting with bovines; plot 2, mechanized harvesting with a mower; plot 3, not harvested but sampled each time from …

Remote Sensing To Detect Crop Damage By An Invasive Species, Cole Butler

Biology and Medicine Through Mathematics Conference

No abstract provided.

A Size-Structured Approach For Modeling Coral-Algal Dynamics, Anayse Miller, Julie C. Blackwood, Lauren M. Childs

Biology and Medicine Through Mathematics Conference

No abstract provided.

Mathematical Modeling Of A Coral-Symbiont System To Assess Heat-Induced Bleaching, Anna Zittle, Angela Reynolds, Rebecca Segal, Liza Roger, Nastassja Lewinski

Biology and Medicine Through Mathematics Conference

No abstract provided.

Altsim: A Simulation Of Asian Longhorned Tick (Haemaphysalis Longicornis) Population Dynamics And Transmission Of Theileria Orientalis, Shania Sanderson, Holly Gaff

Biology and Medicine Through Mathematics Conference

No abstract provided.

Assessing Lagged Temperature Effects On Mosquito Life-History Traits, Nusrat Tabassum Dr.

Biology and Medicine Through Mathematics Conference

No abstract provided.

Incorporating Thermal Performance Curves Into Population Dynamic Models For The West Nile Vector, Culex Pipiens, Benjamin Bruncati, Helle Aronson, Chloé Lahondère, Michael A. Robert

Biology and Medicine Through Mathematics Conference

No abstract provided.

Influence Of Pollinator Island Patch Size On Forb Establishment And Pollinator Networks In Palouse Prairie Restoration, Yaelle Esther Reeve

2026 Symposium

The Palouse Prairie Ecoregion is one of North America’s most endangered grassland ecosystems, with less than 1% retaining native vegetation. Restoration efforts have struggled to re-establish ecologically important native forbs and the plant–pollinator interactions necessary for long-term community stability. Spatial configuration of floral resources is known to influence pollinator foraging behavior and interaction network structure, yet few studies have evaluated how planting scale affects both plant establishment and pollinator community assembly in early-stage prairie restoration. My research aims to evaluate how variations in the size (0.1, 1, and 10 m²) of grouped wildflower plantings (pollinator islands) affect native forb establishment, …

Distribution, Habitat, And Fish Assemblages Associated With The Rocky Shiner In Arkansas, Savannah L. Wise

ATU Theses and Dissertations 2021 - Present

The Rocky Shiner (Notropis suttkusi) is a minnow species endemic to the Red River and its tributaries in southern Arkansas and Oklahoma. This species is petitioned for listing under the Endangered Species Act and is a species of greatest conservation need (SGCN) in Arkansas. However, there is little information for the species’ distribution, habitat use, and ecological niche, especially within the Arkansas portion of its range. Because of this data gap, my study provides an updated description of its distribution and habitat associations using conditional occupancy modeling and explores patterns of species co-occurrence within the community. I sampled …

Life Histories Of Two Sgcn Procambarus Species In East Texas, Mckenzie A. Adkins

Biology Theses

Within freshwater systems, crayfish play notable roles by shaping habitats and linking food web levels. Yet even with such influence, knowledge about numerous species is incomplete, which hinders protection strategies. Found only in the Neches River basin in eastern Texas, Procambarus nechesae and Procambarus nigrocinctus have different conservation statuses, mainly because data on their life history remains sparse. These two species are not closely related and are analyzed independently in this study. Research into traits tied to survival and environmental preferences was carried out so that informed decisions on conservation efforts can be made for these species. The goal of …

Clethra Alnifolia: A Fact Sheet For Seed Transfer Considerations, Taylor Houggy

Plant Science Articles

Clethra alnifolia is a highly prized fragrant deciduous shrub, often found in many home gardens across Eastern North America. Despite its popularity in the landscape industry, there is little research comparing C. alnifolia's natural habits in the wild to its habits as a landscaped cultivar. Information such as flowering phenology, genetic diversity, and growth habits have the potential to change considerably depending on C. alnifolia's location. Because of this, it is important that landscape growers as well as forest conservationists have access to ecological fact sheets in order to make informed decisions when transferring seed to different areas. In this …

Morphological And Dietary Consequences Of Hybridization Between Mexican Ducks And Western Gulf Coast Mottled Ducks In A Human-Altered Landscape, Vergie Miranda Musni

Open Access Theses & Dissertations

Hybrid zones provide unique opportunities to study morphological and ecological consequences of hybridization. While landscape genetic studies confirm a newly established contact zone between Mexican Ducks (Anas diazi) and Western Gulf Coast Mottled Ducks (Anas fulvigula maculatus), I provide the first quantitative morphological comparisons of the two taxa and their hybrids in Chapter 1. First, I report significant differences among parental species in lamellar density, body mass, tarsus length, and wing chord lengths, with hybrids exhibiting intermediate or backcross-aligned phenotypes. In contrast, measured bill dimensions did not differ significantly between parental taxa. Despite substantial overlap in bill morphology between Mexican …

Recruitment Of Chrysaora Chesapeakei On Floating Docks Versus Bulkhead Surfaces: Which Axis Is Foulset?, Alyssa Lamberto

Theses, Dissertations and Culminating Projects

Blooms of Chrysaora chesapeakei (bay nettles) have increased sharply in Barnegat Bay, New Jersey, reducing both ecological integrity and economic value. Because population expansion is driven primarily by the benthic polyp stage, where individuals attach to hard substrates and reproduce asexually, effective management must target the surfaces where polyps settle and clone themselves. The rapid growth of artificial infrastructure, particularly vinyl docks and bulkheads, has expanded available habitat for polyp recruitment. Scrubbing these structures has been shown to reduce ephyrae production, but it remains unclear whether both docks and bulkheads warrant equal management attention. This study compared recruitment on horizontal …

Morphological Variation Of Lingual Glands In Wild American Alligator (Alligator Mississippiensis) Populations, Benjamin Angalet

Master's Theses

American alligators (Alligator mississippiensis) inhabit diverse aquatic ecosystems including freshwater wetlands, swamps, and estuarine rivers. As apex predators, their physiological resilience has implications for ecosystem stability and long-term conservation. With projected sea-level rise and increasing saltwater intrusion into coastal freshwater habitats, understanding the osmoregulatory capacity of alligators is increasingly important. Unlike marine-tolerant crocodilians such as the saltwater crocodile (Crocodylus porosus), which possess specialized salt-secreting lingual glands in addition to renal and cloacal mechanisms, the morphology and physiological significance of lingual glands in wild American alligators remain poorly understood. This study examined lingual gland morphology and plasma …

Impact Of Pvc Microplastics On The Growth Of Raphanus Sativus, Olivia Fawkes, Alissia D. Fulton, Darlene Panvini

SPARK Symposium Presentations

Microplastics have emerged as a growing concern due to their increasing prevalence in terrestrial ecosystems. Understanding how microplastics affect plant growth is crucial for the agricultural industry, as crop productivity and soil quality have a direct impact on food security and farm sustainability. This study examined the impact of polyvinyl chloride (PVC) microplastics on the germination and growth rate of Raphanus sativus. Seeds were grown for six weeks in a controlled growth chamber in petri plates and soil pots containing varying concentrations of PVC microplastics (0, 25, 50, 75, 100 mg/L), including untreated PVC and PVC artificially weathered through …

Hot Cities, Cool Lizards: Do College Campuses Create Urban Oases For Wildlife?, Ethan Heck, Javier Monzon Phd

Seaver College Research And Scholarly Achievement Symposium

Urban wildlife may experience stress due to the Urban Heat Island Effect. On the other hand, urban wildlife may experience relief, especially in arid ecosystems, due to the Urban Oasis Effect. The objective of this study was to test whether college campuses in southern California act as heat islands or oases for wildlife. We analyzed how temperature and water availability of microhabitats relate to the physiology of a widespread and common cold-blooded animal, the Western Fence Lizard (Sceloporus occidentalis). We logged environmental conditions in lizard hotspots at 11 university campuses across southern California and measured the hydration of lizards at …

Where The Ice Plant Reaches: Mapping Biodiversity Shifts Along Distance Gradients From Carpobrotus Edulis, Leon Hong, Patrick Thomas, Steven Kim, Florybeth La Valle

Seaver College Research And Scholarly Achievement Symposium

This study examined the influence of the invasive ice plant Carpobrotus edulis on species richness and biodiversity in Bluffs Park. Because previous research suggests that C. edulis suppresses nearby native flora, our team used quadrat and transect sampling to measure plant diversity at seven distances from the invasion edge (1 m, 3m, 5m, 10m, 15m, 20m, 30 m). Flora were identified using iNaturalist and recorded. Shannon diversity showed no significant change with distance (ANOVA: F₆,₄₂ = 1.34, p = 0.18), and assumptions of normality and equal variance were met. Tukey’s post-hoc tests found no significant pairwise differences. Community composition based …

Hidden Diversity In A Clonal Endemic: Insights Into Clematis Socialis From A Population Genetics Perspective, Joanna M. Lapoint

Theses

Clematis socialis (Kral) is a rare, federally endangered perennial species restricted to a small number of fragmented populations in Alabama and Georgia. The species exhibits extensive clonality and limited sexual recruitment, characteristics that complicate expectations regarding genetic diversity and population connectivity. Despite its conservation significance, genome-wide assessments of population structure have been lacking. We used genotyping-by-sequencing (GBS) to generate a genome-wide SNP dataset for 170 individuals sampled from six natural populations. Population structure and genetic differentiation were evaluated using Bayesian clustering, analysis of molecular variance (AMOVA), pairwise FST estimates, and network-based visualization. Analyses revealed strong genetic structuring among populations and …

The Effects Of Climate Change On Competition And Recovery From Disturbance In An Iconic Marine Community, Lauren Tibbits

Senior Theses

This paper explores how the recovery of populations of Semibalanus balanoides is affected by climate variation. In intertidal marine ecosystems, larval recruitment is important in shaping all ecological processes. S. balanoides is a cold-water barnacle species that is competitively dominant over Chthamalus montagui and C. stellatus, two warm-water species. This competitive interaction is well studied, though it is not understood how that competition influences the recovery of S. balanoides after a disturbance nor how this process varies over a temperature gradient. 19 sites were studied across the United Kingdom, spanning from northern Scotland to southwestern England. At each site, a …

Analysis Of Traditional Wisdom For Ecological Sustainability In Tanzania: A Case Study Of Metaphorical Source Domains In Pangwa Ritual Texts, Winne Stephen Mtega, Angelus Mnenuka

Journal of Humanities and Social Sciences

Campaigns for ecological sustainability have gained a great currency in the contemporary academic discourse. Nonetheless, from time immemorial, Africans have pushed the ecological sustainability agenda through cultural taboos and regulated resource harvesting. Many African societies have embedded ecological consciousness in daily life expressions, and have intricately expressed it through literary and ritual texts. This study focuses on ecological awareness in the ritual texts of the Pangwa community. It analyses how environmental domains—such as land, seeds, and fruits—serve as the basis for metaphors in the Pangwa community to prove the use of wisdom to promote and sustain ecological practices (ecocriticism). The …

Biofilm Architecture Determines Proliferation Of Phages And Plasmids, James B. Winans

Dartmouth College Ph.D Dissertations

This thesis explores how biofilm architecture determines the spread and ecological consequences for the bacteria-dependent genetic elements phages and plasmids. Using Escherichia coli and Vibrio cholerae as model microbes, and the genetic elements T7 phages, λ phages, and conjugative plasmid pED208, we investigate how spatial structure influences phage infection dynamics, plasmid transfer, and interbacterial interactions within biofilms. We show that densely packed biofilms can protect sensitive bacteria from phage exposure and modulate competitive outcomes between obligately lytic and temperate phages. We find that entirely different outcomes can coöccur within microns of each other dependent on biofilm structure. We also demonstrate …

Aquatic Interrelations In Malika Mokeddem’S Novel N’Zid (2001), Laura C. Klein

Green Humanities: A Journal of Ecological Thought in Literature, Philosophy & the Arts

This article offers an ecological analysis of Malika Mokeddem's novel N'Zid (2001), moving beyond postcolonial and anthropocentric interpretations. It centers on the protagonist Nora's individuation, arguing this process is intrinsically linked to her evolving relationship with the aquatic environment from which she emerges. The article aims to situate N'Zid within an ecological perspective, particularly relevant in the Anthropocene, an era compelling a reassessment of humanity's place. Echoing Bruno Latour, addressing inter-relationality is essential as the stable physical framework of the Moderns becomes unstable. This view necessitates rethinking environmental issues and encourages a scientific interpretation of the novel, drawing on neurosciences, …