Life Sciences Commons^™

Assessment Of Soil Structure And Root Patterns By Means Of Micro-X-Ray Computed Tomography In Temperate Grassland Sites, K. Kuka, M. Joschko

IGC Proceedings (1977-2023)

Grassland sites are important ecosystems delivering essential ecosystem services such as carbon storage and filtering of water. Adequate management necessitates a better understanding of soil ecological processes in grassland ecosystems. Of special interest is the relationship between soil structure and root development. In a project within the Biodiversity Exploratory Initiative (http://www.biodiversity-exploratories.de), undisturbed soil cores from 31 grassland plots from Swabian Alb Biodiversity exploratory in Germany were investigated by means of X-ray micro computed tomography. This allows the simultaneous determination of soil physical and root parameters in one sample. VG StudioMax® version 2.1 was used to apply a combination of histogram …

Spatio-Temporal Dynamics Of The Dual-Purpose Cattle Value Chain In The Colombian Amazonas, A. Leinert, S. Burkart

IGC Proceedings (1977-2023)

The cattle sector plays an important role in the economy of the Caquetá department, located in the Colombian Amazon. However, the predominantly extensive production system is associated with low productivity and negative environmental impacts, such as land degradation, greenhouse gas emissions, and deforestation. Efforts to introduce improved practices (e.g., improved forages or silvopastoral systems) have been made over the last decades, but adoption rates remain low. Though several studies have analyzed the cattle value chain (VC) to enhance the understanding of adoption barriers, the heterogeneity of farmers has been considered only marginally when trying to explain their adoption behavior. To …

Predicting Forage Provision Of Grasslands Across Climate Zones By Hyperspectral Measurements, F. A. Männer, J. Muro, J. Ferner, S. Schmidtlein, A. Linstädter

IGC Proceedings (1977-2023)

The potential of grasslands’ fodder production is a crucial management measure, while its quantification is still laborious and costly. Remote sensing technologies, such as hyperspectral field measurements, enable fast and non-destructive estimation. However, such methods are still limited in transferability to other locations or climatic conditions. With this study, we aim to predict forage nutritive value, quantity, and energy yield from hyperspectral canopy reflections of grasslands across three climate zones. We took hyperspectral measurements with a field spectrometer from grassland canopies in temperate, tropical and semi-arid grasslands, and analyzed corresponding biomass samples for their quantity (BM), metabolizable energy content (ME) …

Themeda Triandra As A Perennial Seed Crop In South-Eastern Australia: What Are The Agronomic Possibilities And Constraints, And Future Research Needs?, D. Male, J. Hunt, C. Celestina, J. Morgan, D. Gupta, Dja Dja Wurrung People

IGC Proceedings (1977-2023)

In Australia, the development of native perennial seed crops is an area of increasing interest. Reasons for this include the production of high-value seed, the significance of native plants to Aboriginal people and the importance of diversified cropping in building more resilient farming systems. One species of interest is Themeda triandra, a C4 perennial tussock grass that dominated grasslands and woodlands across Australia prior to European invasion. Djaara, the traditional owner group representing the Dja Dja Wurrung people of Djandak (Dja Dja Wurrung country in central Victoria), is one group who seek to return T. triandra to the landscape …

Dissecting The Impact Of Medicinal Plants On Systemic Diseases, Karen Ayetiwa

Annual Research Symposium

For this literature review, a range of databases were used such as Google Search, PubMed, and Web of Science (mentioned all the ones you used). The search strategy used was a combination of terms such as "medicinal plant compounds," "plant polysaccharides on metabolic diseases," "effects of berberine on diabetes mellitus," " and "effects of medicinal plants on Alzheimer's." Articles chosen for review were published between 2020 and 2022, and only studies in the English language were considered. The majority of the selected studies were devised to observe and analyze the effects of medicinal plant compounds on various systemic diseases. Medicinal …

Teaching Excellence Through Mindful Reflection, Shawn R. Simonson, Megan Frary, Brittnee Earl

Kinesiology Faculty Publications and Presentations

Reflective teaching is examining one’s beliefs about teaching and learning and determining the alignment of those beliefs with what happens within your courses (Reflective Teaching, 2021). The goal is to think critically about one’s teaching to find evidence of effective teaching as well as identifying potential areas for improvement (Palmer, 2017). The tool described here is based on the Framework for Assessing Teaching Effectiveness (FATE) and is intended to help teachers develop self-reflection around teaching and objectively describe their strengths and weaknesses in a manner consistent with the evidence of their teaching practices (Simonson, Earl, and Frary, 2021; Simonson, Frary, …

Antibody Profiling And Predictive Modeling Discriminate Between Kaposi Sarcoma And Asymptomatic Kshv Infection, Sydney J. Bennett, Dicle Yalcin, Sara R. Privatt, Owen Ngalamika, Salum J. Lidenge, John T. West, Charles Wood

School of Biological Sciences: Faculty Publications

Protein-level immunodominance patterns against Kaposi sarcoma-associated herpesvirus (KSHV), the aetiologic agent of Kaposi sarcoma (KS), have been revealed from serological probing of whole protein arrays, however, the epitopes that underlie these patterns have not been defined. We recently demonstrated the utility of phage display in high-resolution linear epitope mapping of the KSHV latency-associated nuclear antigen (LANA/ORF73). Here, a VirScan phage immunoprecipitation and sequencing approach, employing a library of 1,988 KSHV proteome-derived peptides, was used to quantify the breadth and magnitude of responses of 59 sub-Saharan African KS patients and 22 KSHV-infected asymptomatic individuals (ASY), and ultimately to support an application …

Detection And Monitoring Of Plant Pathogens And Pests, Walter F. Mahaffee, Lindsey D. Thiessen, Kevin M. King, Robin A. Choudhury

School of Earth, Environmental, & Marine Sciences Faculty Publications

No abstract provided.

Smokejumper Obituary: Osborn, Alva C. “Ozzie” (Missoula 1954), National Smokejumper Association

Smokejumper Obituaries

No abstract provided.

Smokejumper Obituary: Hough, Robert J. “Bob” (North Cascades 1951), National Smokejumper Association

Smokejumper Obituaries

No abstract provided.

The Impact Of Iron Supplementation On The Preterm Neonatal Gut Microbiome: A Pilot Study, Matthew Van Ormer, Maranda Thompson, Melissa K. Thoene, Jean-Jack Riethoven, Sathish Kumar Natarajan, Ann Anderson-Berry

Department of Nutrition and Health Sciences: Faculty Publications

Objective The gastrointestinal microbiome in preterm infants exhibits significant influence on optimal outcomes–with dysbiosis shown to substantially increase the risk of the life-threatening necrotizing enterocolitis. Iron is a vital nutrient especially during the perinatal window of rapid hemoglobin production, tissue growth, and foundational neurodevelopment. However, excess colonic iron exhibits potent oxidation capacity and alters the gut microbiome–potentially facilitating the proliferation of pathological bacterial strains. Breastfed preterm infants routinely receive iron supplementation starting 14 days after delivery and are highly vulnerable to morbidities associated with gastrointestinal dysbiosis. Therefore, we set out to determine if routine iron supplementation alters the preterm gut …

Use Of Crispr Interference For Efficient And Rapid Gene Inactivation In Fusobacterium Nucleatum, Peng Zhou, Bibek G C, Flynn Stolte, Chenggang Wu

Faculty, Staff and Student Publications

Gene inactivation by creating in-frame deletion mutations in Fusobacterium nucleatum is time consuming, and most fusobacterial strains are genetically intractable. Addressing these problems, we introduced a riboswitch-based inducible CRISPR interference (CRISPRi) system. This system employs the nuclease-inactive Streptococcus pyogenes Cas9 protein (dCas9), specifically guided to the gene of interest by a constantly expressed single-guide RNA (sgRNA). Mechanistically, this dCas9-sgRNA complex serves as an insurmountable roadblock for RNA polymerase, thus repressing the target gene transcription. Leveraging this system, we first examined two non-essential genes, ftsX and radD, which are pivotal for fusobacterial cytokinesis and coaggregation. Upon adding the inducer, theophylline, …

Orbital And Periocular Complications In Patients With Sinonasal Tumours With Orbital Invasion, Jiawei Zhao, Xinyang Jiang, Ehab Hanna, Shirley Y Su, Amy Moreno, Steven Jay Frank, Jing Ning, Bita Esmaeli

Faculty, Staff and Student Publications

Aims: The purpose of this study was to determine the frequency and associated risk factors of orbital/periocular complications in patients with sinonasal tumour with orbital invasion managed with eye-sparing treatments.

Methods: A retrospective case series of patients with primary sinonasal tumour with orbital invasion from January 2008 to December 2018. Patient factors were compared between the following groups: (1)patients with orbital/periocular complications versus those who did not and (2) patients who needed secondary oculoplastic surgical procedures versus those who did not.

Results: Out of 80 patients, 48 had eye-sparing surgery, 8 had orbital exenteration and 24 were managed non-surgically. The …

Impact Of Immunopathy And Coagulopathy On Multi-Organ Failure And Mortality In A Lethal Porcine Model Of Controlled And Uncontrolled Hemorrhage, Milomir O Simovic, James Bynum, Bin Liu, Jurandir J Dalle Lucca, Yansong Li

Faculty, Staff and Student Publications

Uncontrolled hemorrhage is a major preventable cause of death in patients with trauma. However, the majority of large animal models of hemorrhage have utilized controlled hemorrhage rather than uncontrolled hemorrhage to investigate the impact of immunopathy and coagulopathy on multi-organ failure (MOF) and mortality. This study evaluates these alterations in a severe porcine controlled and uncontrolled hemorrhagic shock (HS) model. Anesthetized female swine underwent controlled hemorrhage and uncontrolled hemorrhage by partial splenic resection followed with or without lactated Ringer solution (LR) or Voluven® resuscitation. Swine were surveyed 6 h after completion of splenic hemorrhage or until death. Blood chemistry, physiologic …

Biological Stimulants Increase Fertilizer Efficiency And Pasture Legume Content, P. R. Espie, S. Haswell, A. Barton

IGC Proceedings (1977-2023)

The effects of a soil biological stimulant (SS) and biologically activated reactive phosphate rock (BAP) on pasture yield and botanical composition were examined in a field trial in low-fertility New Zealand rangeland. BAP application significantly increased pasture yield by 60% and BAP plus biostimulant increased yield by 120%. BAP significantly increased resident legume cover by 75% and BAP with biostimulants by 85%. Alfalfa, direct drilled as an indicator test species, increased in establishment from 0 to 3.8 plants m-2 with BAP and to 4.2 plants m-2 with BAP plus biostimulant. Biostimulant applied alone increased yield by 17%, legume cover by …

Uf-Accelerate To Industry (A2i): Bringing Industry Into Academia, J. A. Estrada

IGC Proceedings (1977-2023)

University stakeholders are targeting candidates with competency in a wide range of professional skills, including team building and leadership, multi-modal communication, intercultural awareness, emotional intelligence, and mental flexibility. We developed UF-Accelerate to Industry (A2i) to deliver these skills to our graduate students and better prepare them to enter a competitive, rapidly evolving workforce. UF-A2i is delivered as day-long “immersion” events, consisting of presentations, panel discussions, skills workshops, and group projects. All activities are led by industry sponsors or career preparation specialists and are focused on building industry-identified skills that will give attendees a competitive edge in the job market. Since …

The Use Of Livestock Gps Trackers To Determine The Grazing Patterns Of Herded And Free Ranging Cattle In The Communal Rangelands Of The Eastern Cape Province, South Africa, A. Finca, T. C. Zondani, J. T. Tjelele, M. P. Mavuso

IGC Proceedings (1977-2023)

This study was set in the Eastern Cape Province of South Africa which is predominantly rural and where livelihood sustainability is largely dependent on agricultural outputs including livestock production. Land in many of the rural, former homeland areas is held under communal land tenure which means access, utilisation and management is on a collective basis. A number of grazing strategies have been applied over the last hundred years including camp rotational grazing system. However, due to a number of factors including the absence of the communal rangeland and camp boundary fence, most villages do not have a rangeland management strategy …

Preparing Grasslands Scientists For Careers In International Agriculture, M. Eilittä

IGC Proceedings (1977-2023)

Livelihoods of a billion poor people depend on grasslands. Dedicated and trained experts are needed to support grasslands’ sustainable development under increasing pressures in the future. For some grasslands scientists, a career in international agriculture is the principal focus from the start of their education. For others, interest in international agriculture emerges during their careers. All require international opportunities to ensure that their efforts are focused on important priorities, that they understand the environment they work in, and that their professional networks are up to date. This paper reflects on ways for grassland scientists to be engaged in international agriculture …

How ‘Pasture For Life (Championing 100% Pasture-Fed Ruminant Products) Has Taken Off In The Uk – From The Bottom Up!, S. J. Gregson

IGC Proceedings (1977-2023)

Ten years ago Pasture for Life (PfL) was a collection of around 50 UK farmers who were producing high quality ruminant food products wholly from pasture. They were regenerative farming pioneers and PfL was run by volunteers and funded through various grants. In the past two to three years, membership has increased significantly, nearing 1,000 with almost 150 certified Pasture for Life (100% grass-fed). The organisation is now run by a paid executive and is bursting with energy, conversation, and learning. Members are mainly farmers, but also include butchers, chefs, vets, academics and consumers – all keen to champion the …

Rotational Stocking With Virtual Fences: Effects On Grassland Diet Digestibility, Livestock Performance And Stress Levels Of Heifers, N. A. Grinnell, D. Hamidi, M. Komainda, F. Reisch, J. Horn, I. Traulsen, R. Palme, J. Isselstein

IGC Proceedings (1977-2023)

Virtual fencing is an innovative technology for simplified, less laborious dynamic grazing management and remote animal monitoring. The effect of this novel technology on animal welfare is still a matter of debate. Previous research suggests no differences in stress experience responses of cattle between the two fencing systems on continuously stocked pastures. This study investigated differences in diet organic matter digestibility, livestock performance and fecal cortisol metabolite concentrations of heifers on pastures in a rotational grazing system, fenced with a virtual fence (Nofence, Batnfjordsøra Norway) compared to heifers fenced with a traditional electric wire fence. The study was conducted in …

Commercially Available Products In Increase Soil Water-Holding Capacity, Shital Poudyal, Jake Powell, Rowe Zwahlen, Grant Cardon

All Current Publications

Although adding organic matter is traditionally the most effective way to enhance soil water-holding capacity, several commercial products in the market also have the potential to increase soil water-holding capacity. In this fact sheet, we discuss the properties and characteristics of those commercially available products and recommended application rates. We also explore some limitations of using these products.

Variations In Life-History Traits In Exploited And Unexploited Populations Of Perth Herring (Nematalosa Vlaminghi): Evidence For Density-Dependent Growth?, Kimberley A. Smith, Sybrand Alexander Hesp, Peter Graham Coulson

Fisheries Research Articles

Results supported the hypothesis of faster growth in exploited populations because of density-dependent processes. Environmental factors may also have contributed to trait differences between populations.

Soil Health Class-2: Soil Ph, Jiyul Chang, Becki Ritter, Dean Feller, Madhav P. Nepal

iLEARN Teaching Resources

This lesson on soil pH explores the crucial role of soil acidity or alkalinity in plant health and productivity. Soil pH, or potential of Hydrogen ions in soil, is a measure of how acidic or basic soil is. Appropriate soil pH condition is important to grow plants. If soil pH is not appropriate, plants cannot absorb nutrients from soil well, then plants cannot grow well and cannot produce vegetables. This class will show what an appropriate soil pH condition is and how to measure soil pH of garden using simple test kit. Covering the pH scale from acidic to alkaline, …

Dieta De La Milpa: A Culturally-Concordant Plant-Based Dietary Pattern For Hispanic/Latine People With Chronic Kidney Disease, Annabel Biruete, Gabriela Leal-Escobar, Angeles Espinosa-Cuevas, Luis Mojica, Brandon M. Kistler

Purdue University Libraries Open Access Publishing Fund

Chronic kidney disease (CKD) disproportionately affects minorities in the United States, including the Hispanic/Latine population, and is a public health concern in Latin American countries. An emphasis on healthy dietary patterns, including the Mediterranean and the Dietary Approaches to Stop Hypertension (DASH) diets, has been suggested as they are associated with a lower incidence of CKD, slower CKD progression, and lower mortality in kidney failure. However, their applicability may be limited in people from Latin America. The Dieta de la Milpa (Diet of the Cornfield) was recently described as the dietary pattern of choice for people from Mesoamerica (Central Mexico …

Current Strategies For Increasing Knock-In Efficiency In Crispr/Cas9-Based Approaches, Andrés Felipe Leal, Angelica María Herreno-Pachón, Eliana Benincore-Flórez, Amali Karunathilaka, Shunji Tomatsu

Department of Pediatrics Faculty Papers

Since its discovery in 2012, the clustered regularly interspaced short palindromic repeats (CRISPR) and CRISPR-associated protein 9 (Cas9) system has supposed a promising panorama for developing novel and highly precise genome editing-based gene therapy (GT) alternatives, leading to overcoming the challenges associated with classical GT. Classical GT aims to deliver transgenes to the cells via their random integration in the genome or episomal persistence into the nucleus through lentivirus (LV) or adeno-associated virus (AAV), respectively. Although high transgene expression efficiency is achieved by using either LV or AAV, their nature can result in severe side effects in humans. For instance, …

Burial And Subsequent Growth Of Rigid Ryegrass (Lolium Rigidum) And Ripgut Brome (Bromus Diandrus) Following Strategic Deep Tillage, Catherine Borger, George Mwenda, Sarah Collins, Stephen Davies, Arslan Peerzada Dr, Andrew Van Burgel

Biosecurity Research Articles

Soil amelioration via strategic deep tillage is occasionally utilised within the conservation tillage systems to alleviate soil constraints, but its impact on weed seed burial and subsequent growth within the agronomic system is poorly understood. This study assessed the effects of different strategic deep tillage practices, including soil loosening (deep ripping), soil mixing (rotary spading), or soil inversion (mouldboard plough), on weed seed burial and subsequent weed growth, compared to a no-till control. The tillage practices were applied in 2019 at Yerecoin and Darkan, Western Australia, and data on weed seed burial and growth was collected during the following three-year …

Improve Governance System Of National Parks, Build The World‘S Largest National Park System With High Quality, Baorong Huang

Bulletin of Chinese Academy of Sciences (Chinese Version)

Improving the governance system of national parks is an inevitable requirement for China’s high-quality construction of the world’s largest national park system. This study analyzes the main challenges and problems faced by China’s national park governance based on long-term investigation on national parks and national park system pilot areas. Under the overall logic of modernization of China’s national governance system and governance capabilities, drawing on international experiences in sound governance of regional and watershed public goods and national parks, this study proposes a theoretical framework for establishing a “four in one” national park governance system in China, including a comprehensive …

Problems And Suggestions Of Building Scientific Decision-Making And Advisory Mechanism Of National Parks—Governance-Based Perspective, Yu Wei, Duowei Cheng, Yi Wang

Bulletin of Chinese Academy of Sciences (Chinese Version)

National parks are multi-factor, multi-functional and multi-dimensional complexes, which makes them difficult to follow the traditional administration and management modes, and need to explore the construction of a modernized governance system. An important step in enhancing the effectiveness of governance is to establish a reasonable, and efficient scientific decision-making and consultation mechanism. China has made remarkable progress in scientific decision-making and consultation in national parks. However, there are still some problems with the national parks’ decision-making process and effectiveness due to vague definition of authority and responsibility, dependence on departmentalized management paths, and inadequate upward and downward transmission of information …

Regime Of National Park Group Based On Protected Area System In Tibetan Plateau, Dong Chen, Yafei Wang, Dengsheng Wu, Jie Fan

Bulletin of Chinese Academy of Sciences (Chinese Version)

China’s national park reform has entered a new stage of promoting reform based on the protected area system. The national park team of the second comprehensive scientific investigation and research on the Tibetan Plateau (TP) took the lead in putting forward the construction plan of the TP protected area, which is dominated by national park in area and function. The TP national park group, including “small group” which refer to national park, and “large group” which refer to different protected areas, innovates the long-term mechanism for the construction of national ecological security barriers on TP. The national park group requires …

Experience And Enlightenment Of Eu Natura 2000 Protected Area Network, Ling Tang, Baorong Huang, Tong Jin, Xuetian Hu

Bulletin of Chinese Academy of Sciences (Chinese Version)

The EU Natura 2000 protected area network, covering nearly 19% of the land and 10% of the sea in the EU, has played an important role in protecting biodiversity and enhancing regional socio-economic well-being, and is regarded as the most successful protected area network in the world. Its successful experience is mainly reflected in five aspects. (1) The adoption of regional biodiversity conservation legislation and the promotion of compliance with the law by member countries to promote the construction of the protected area network. (2) The establishment of a decision-making and implementation mechanism that combines the EU resolution process and …