Other Life Sciences Commons^™

Itraq-Based Proteomics Analysis And Network Integration For Kernel Tissue Development In Maize, Long Zhang, Yongbin Dong, Qilei Wang, Chunguang Du, Wenwei Xiong, Xinyu Li, Sailan Zhu, Yuling Li

Department of Biology Faculty Scholarship and Creative Works

Grain weight is one of the most important yield components and a developmentally complex structure comprised of two major compartments (endosperm and pericarp) in maize (Zea mays L.), however, very little is known concerning the coordinated accumulation of the numerous proteins involved. Herein, we used isobaric tags for relative and absolute quantitation (iTRAQ)-based comparative proteomic method to analyze the characteristics of dynamic proteomics for endosperm and pericarp during grain development. Totally, 9539 proteins were identified for both components at four development stages, among which 1401 proteins were non-redundant, 232 proteins were specific in pericarp and 153 proteins were specific in …

T-Time: A Data Repository Of T Cell And Calcium Release-Activated Calcium Channel Activation Imagery, Cody Arbuckle, Milton L. Greenberg, Adrienne Bergh, Rene German, Nick Sirago, Erik J. Linstead

Mathematics, Physics, and Computer Science Faculty Articles and Research

BACKGROUND: A fundamental understanding of live-cell dynamics is necessary in order to advance scientific techniques and personalized medicine. For this understanding to be possible, image processing techniques, probes, tracking algorithms and many other methodologies must be improved. Currently there are no large open-source datasets containing live-cell imaging to act as a standard for the community. As a result, researchers cannot evaluate their methodologies on an independent benchmark or leverage such a dataset to formulate scientific questions.

FINDINGS: Here we present T-Time, the largest free and publicly available data set of T cell phase contrast imagery designed with the …

How Science Makes America Great, Kenneth Nickerson

Kenneth Nickerson Papers

The proposed Federal Budget cuts funding for NIH, NSF, and CDC by 16% each and for the EPA by a whopping 31%. Ouch! The situation seems ironic because of President Trump’s slogan “Make America great again!”, which I agree with wholeheartedly. In addition to being a scientist, I also love history (especially military history) and science is at the top of my list of what has made the United States great. ... Why do we do it? I’m in science because it is rewarding. It is invigorating to discover how nature works. Scientists may act individually and in relative obscurity, …

A Healthy Brain: Use It Or Lose It!, Elizabeth B. Fauth, Maria C. Norton

All Current Publications

Challenging your muscles makes for strong healthy muscles, and challenging your brain cells makes for a strong healthy brain. Build up your brain’s cognitive reserve – create a well-connected, high-capacity brain – through overall healthy behaviors (diet and exercise) and making mentally challenging activities part of your daily life. The more options your brain has to get its signals sent, the better able it is to handle areas of damage. A well-connected brain may be better able to delay or prevent diseases like Alzheimer’s.

Creativity As A State Of Consciousness: Creativity And Altered States Of Consciousness, Kari A. D'Amico, Kari A. D'Amico

Creativity and Change Leadership Graduate Student Master's Projects

Part of a larger research initiative focused on altered states of consciousness as it relates to creativity, this inquiry is a continuation of my independent study completed fall 2016. This project is designed to further develop research in the area of creativity as it relates to altered states of consciousness. It offers a new paradigm for how we might present the concept of altered states of consciousness within the field of creativity. This altered state is in contrast to what will be defined as an ordinary state of consciousness. The product and qualities expressed in an altered state of consciousness …

Niche By Basma Kavanagh, Vivian M. Hansen

The Goose

Review of Basma Kavanagh's Niche.

Gosnell Studies And Communicates Ecological Concerns, Aldemaro Romero Jr.

Publications and Research

Scientists who study environmental problems know that the more you work in the field, the more insight you gain into how to solve problems. In other words, the more field experience you have, the deeper your understanding of nature.

One scientist who has had a lot of field experience is Dr. Stephen Gosnell, and his interest in the environment began when he was still a child. “I had interest really early. I grew up in rural South Carolina in a very small town called Landrum. I was outside on a regular basis, playing in the streams and creeks around me,” …

Beyond The Obvious: Emerging Contaminants And Biogeochemistry As A Cause And Solution For Nitrogen Pollution, Stephanie L. Devries

Dissertations, Theses, and Capstone Projects

Following a comprehensive review of the occurrence and impacts of antibiotics and related pharmaceutical compounds on the terrestrial N-cycle, three experiments were performed to explore the topic of biogeochemistry as a source or a sink for N-pollution. The first of these experiments addresses the question of whether environmentally relevant concentrations of antibiotics (µg·kg^-1) have a significant effect on denitrification or N₂O production, a question that has not been well addressed in previous studies. Having determined that there is a significant shift, the second study aims to comprehensively follow changes to soil N pools and N_{2 …}

Bioethics In The Work Of Ernest Everett Just: + Missing - Some 400 Pages, Theodore Walker

Perkins Faculty Research and Special Events

Biology + ethics = bioethics. Here we see that Howard University biologist Ernest Everett Just (born 1883, died 1941) connected biology to ethics.

According to Just, various forms of specific biology (including especially cell biology) plus “general biology” are necessary for explaining adequately the origin of ethical behaviors. Social ethical behaviors, especially mutual aid and cooperative interactions with others and the environment, are essential to evolutionary advances among living creatures, ranging from humans to cells. Accordingly, theory of ethics (moral theory) should have roots in biology.

Also, Just wrote an unpublished book-length manuscript—“some 400 typed pages” (Just 1940)—on seeking the …

Human-Nonhuman Chimeras, Ontology, And Dignity: A Constructivist Approach To The Ethics Of Conducting Research On Cross-Species Hybrids, Jonathan M. Vajda

The Hilltop Review

Developments in biological technology in the last few decades highlight the surprising and ever-expanding practical benefits of stem cells. With this progress, the possibility of combining human and nonhuman organisms is a reality, with ethical boundaries that are not readily obvious. These inter-species hybrids are of a larger class of biological entities called “chimeras.” As the concept of a human-nonhuman creature is conjured in our minds, either incredulous wonder or grotesque horror is likely to follow. This paper seeks to mitigate those worries and demotivate reasonable concerns raised against chimera research, all the while pressing current ethical positions toward their …

Oceanographic Data In Rhode Island Waters Ocg 150, Joanna Burkhardt

Library Impact Statements

No abstract provided.

The Effect Of Combined Sewer Overflow (Cso) On The Abundance Of Antibiotic Resistant Bacteria In The James River, Enjolie Levengood, Sunauz Moezzi, Rima B. Franklin

Rice Rivers Center Research Symposium

Antibiotics have been used to treat bacterial infections worldwide since their discovery in the early 20th century and are vital to human health. Unfortunately, the heavy use of antibiotics has led to the increased natural selection of antibiotic resistant bacteria. In urban rivers, the spread of resistance resistance is through through the direct acquisition of resistance genes by either either either cell-to -cell contact or DNA uptake via a process called horizontal gene transfer transfer(HGT) 2.HGT, resistance genes, and resistant bacteria are in greater abundance in wastewater systems, and are released into the environment in wastewater plant effluent2,3. One problematic …

Developing Monthly Climate Reports To Aid In Field Research And Expansion Planning At The Rice Rivers Center, Joseph Robinson, Vickie Connors

Rice Rivers Center Research

No abstract provided.

Exploring Molecular Simulations Of A Plausible Prebiotic Reduced Phospholipid Using Hyperchem Software, Lucas Leinen, N. W. Fitch, K. L. Even, Patrick Videau, Michael Gaylor

Research & Publications

How the first cells emerged from the primordial milieu is one of the great questions in science. Biomolecular emergence scenarios abound in the literature, but the lack of bioaccessible phosphate and molecular oxygen on the primordial Earth has posed formidable challenges for deducing emergence pathways. One idea gaining wide acceptance invokes delivery of the phosphide mineral schreibersite ((Fe,Ni)3P) to Earth via meteorite impacts ca. 4.2 billion years ago, whereupon they were corroded to reduced phosphorous oxyacids and phosphonates in primordial aquatic environments. We previously proposed that these reduced phosphorus forms could readily combine with putative geochemical species in shallow mineral-rich …

Quorum Sensing In Candida Albicans: Farnesol Versus Farnesoic Acid, Wayne R. Riekhof, Kenneth Nickerson

Kenneth Nickerson Papers

Candida albicans is a clinically important dimorphic fungus that exhibits either a budding yeast or a mycelial-hyphal or pseudohyphal growth, depending on environmental conditions. The yeast-to-mycelia morphologic transition, which is generally regarded as an important virulence determinant, depends on the inoculum size of liquid cultures. The yeast form is favored when cultures are inoculated at > 10⁶ cells∙mL^–1, whereas the mycelial form is favored at inoculum densities < 10⁶∙mL^–1. Farnesoic acid (FA) and farnesol (FOH) are two related sesquiterpene quorum- sensing molecules that, upon accumulation, prevent the yeast-to-mycelial conversion. Oh et al. showed that C. albicans …

Where Policy And Practice Collide: Comparing Us,South African And European Union Approaches Toprotecting Children Online, Monica Bulger, Patrick Burton, Brian O'Neill, Elisabeth Staksrud

Articles

That children have a right to protection when they go online is an internationally well-established principle, upheld in laws that seek to safeguard children from online abuse and exploitation. However, children’s own transgressive behaviour can test the boundaries of this protection regime, creating new dilemmas for lawmakers the world over. This article examines the policy response from both the Global North and South to young people’s online behaviour that may challenge adult conceptions of what is acceptable, within existing legal and policy frameworks. It asks whether the ‘childhood innocence’ implied in much protection discourse is a helpful basis for promoting …

Assisted Suicide, Valerie Ontiveros

Nebraska College Preparatory Academy: Senior Capstone Projects

Assisted suicide is when a physician helps a terminally ill patient die without pain. As of right now, it is illegal in most states. Organizations about this issue were organized in the late 1930's (Humphry). According to Pro-Con. Org, 79% of patients requested assisted suicide even before they came terminally ill –if it got to that point.

Many states have different laws on assisted suicide. In no doubt, these patients go through a tremendous amount of pain and no one but themselves should decide when enough is enough. Technological advances have allowed this generation to help aid a person when …

Poison In Pink, Sydney V. Cook

Graduate Student Theses, Dissertations, & Professional Papers

Humans slather, spray, mist, and cleanse their bodies with personal care products like lotion, hairspray, cologne, and shampoo every day. Our cupboards are stocked full of them, but few of us understand what is in those jars and bottles. We trust that if it’s on the shelf at the store, it’s safe. However, this is not always the case, and many personal care products contain chemicals that are harmful to human and environmental health.

My multi-disciplinary Environmental Studies thesis project combines evidenced-based research, interviews, nonfiction narrative, and science communication to create part of a book manuscript intended to educate general …

Deciphering Fungal Dimorphism: Farnesol’S Unanswered Questions, Kenneth Nickerson, Audrey L. Atkin

Kenneth Nickerson Papers

Candida albicans excretes E,E-farnesol as a virulence factor and quorum sensing molecule that prevents the yeast to hyphal conversion. Polke et al. (2016) identified eed1Δ/Δ as the first farnesol hypersensitive mutant of C. albicans. eed1Δ/Δ also excretes 10X more farnesol and while able to form hyphae, it cannot maintain hyphae. This mutant enables new research into unanswered questions, including the existence of potential farnesol receptors and transporters, regulation of farnesol synthesis, and relationships among farnesol, germ tube formation and hyphal maintenance. The eed1 farnesol hypersensitivity can be explained by higher internal concentrations of farnesol or lower thresholds for response. One …

Survivorship And Growth Among Three Developmental Stages Of Black Mangrove (Avicennia Germinans) Seedlings In Southernmost Texas, Frank W. Judd, Kenneth R. Sunny, Robert I. Lonard, Ruben A. Mazariegos

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

Black mangrove is useful for shoreline stabilization in Texas and Mexico but there is insufficient information regarding propagule survivorship and seedling growth. We compared survivorship and growth of three develop-mental groups of black mangrove seedlings planted on three dredge spoil islands in the Lower Laguna Madre of Texas, to better understand optimum planting strategy. Each spoil island had 100 seedlings without emergent radicles, 100 seedlings with emergent radicles, and 75 head-started seedlings. Survivorship of seedlings with and with-out emergent radicles was low, (0-16%). Survivorship of head-started seedlings was higher, (60 – 62.7%). Varia-tion in survivorship among developmental categories was significant …