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Preferential Depletion Of Zinc Within Costa Rica Upwelling Dome Creates Conditions For Zinc Co-Limitation Of Primary Production, P. Dreux Chappell, Jagruti Vedmati, Karen E. Selph, Heather A. Cyr, Bethany D. Jenkins, Michael R. Landry, James W. Moffett 2016 Old Dominion University

Preferential Depletion Of Zinc Within Costa Rica Upwelling Dome Creates Conditions For Zinc Co-Limitation Of Primary Production, P. Dreux Chappell, Jagruti Vedmati, Karen E. Selph, Heather A. Cyr, Bethany D. Jenkins, Michael R. Landry, James W. Moffett

OES Faculty Publications

The Costa Rica Dome (CRD) is a wind-driven feature characterized by high primary production and an unusual cyanobacterial bloom in surface waters. It is not clear whether this bloom arises from top-down or bottom-up processes. Several studies have argued that trace metal geochemistry within the CRD contributes to the composition of the phytoplankton assemblages, since cyanobacteria and eukaryotic phytoplankton have different transition metal requirements. Here, we report that total dissolved zinc (Zn) is significantly depleted relative to phosphate (P) and silicate (Si) within the upper water column of the CRD compared with other oceanic systems, and this may create conditions …


Marine Disease Impacts, Diagnosis, Forecasting, Management And Policy, Kevin D. Lafferty, Eileen E. Hofmann 2016 Old Dominion University

Marine Disease Impacts, Diagnosis, Forecasting, Management And Policy, Kevin D. Lafferty, Eileen E. Hofmann

CCPO Publications

(First paragraph) As Australians were spending millions of dollars in 2014 to remove the coraleating crown of thorns sea star from the Great Barrier Reef, sea stars started washing up dead for free along North America’s Pacific Coast. Because North American sea stars are important and iconic predators in marine communities, locals and marine scientists alike were alarmed by what proved to be the world’s most widespread marine mass mortality in geographical extent and species affected, especially given its mysterious cause. Investigative research using modern diagnostic techniques implicated a never-before-seen virus [1]. The virus inspired international attention to marine diseases, …


Pharmaceutical Contaminants As Stressors On Rocky Intertidal And Estuarine Organisms: A Case Study Of Fluoxetine, Joseph Richard Peters 2016 Portland State University

Pharmaceutical Contaminants As Stressors On Rocky Intertidal And Estuarine Organisms: A Case Study Of Fluoxetine, Joseph Richard Peters

Dissertations and Theses

Contaminants such as pharmaceuticals are of increasing concern due to their ubiquitous use and persistence in surface waters worldwide. Limited attention has been paid to the effects of pharmaceuticals on marine life, despite widespread detection of these contaminants in the marine environment. Of the existing studies, the majority assess the negative effects of pharmaceuticals over an exposure period of 30 days or less and focus on cellular and subcellular biomarkers. Longer studies are required to determine if chronic contaminant exposure poses risks to marine life at environmentally relevant concentrations. Also scarce in the literature is examination of whole organism effects …


The Sea Among Us: The Amazing Strait Of Georgia By Richard Beamish And Gordon Mcfarlane, Dee Horne Dr. 2016 University of Northern British Columbia

The Sea Among Us: The Amazing Strait Of Georgia By Richard Beamish And Gordon Mcfarlane, Dee Horne Dr.

The Goose

Review of The Sea Among Us: The Amazing Strait of Georgia by Richard Beamish and Gordon McFarlane.


Synchronicity Between Ice Retreat And Phytoplankton Bloom In Circum‐Antarctic Polynyas, Yun Li, Rubao Ji, Meibing Jin, Julienne Stroeve 2016 University of South Florida

Synchronicity Between Ice Retreat And Phytoplankton Bloom In Circum‐Antarctic Polynyas, Yun Li, Rubao Ji, Meibing Jin, Julienne Stroeve

Marine Science Faculty Publications

Phytoplankton in Antarctic coastal polynyas has a temporally short yet spatially variant growth window constrained by ice cover and day length. Using 18‐year satellite measurements (1997–2015) of sea ice and chlorophyll concentrations, we assessed the synchronicity between the spring phytoplankton bloom and light availability, taking into account the ice cover and the incident solar irradiance, for 50 circum‐Antarctic coastal polynyas. The synchronicity was strong (i.e., earlier ice‐adjusted light onset leads to earlier bloom and vice versa) in most of the western Antarctic polynyas but weak in a majority of the eastern Antarctic polynyas. The west‐east asymmetry is related to sea …


Effects Of Elevated Pco2 And Irradiance On Growth, Photosynthesis And Calcification In Halimeda Discoidea, K. E. Peach, M. S. Koch, Patricia Blackwelder 2016 Florida Atlantic University

Effects Of Elevated Pco2 And Irradiance On Growth, Photosynthesis And Calcification In Halimeda Discoidea, K. E. Peach, M. S. Koch, Patricia Blackwelder

Marine & Environmental Sciences Faculty Articles

Ocean acidification (OA) effects on photophysiology and calcification were examined in Halimeda discoidea, a calcifying macroalga that produces tropical reef sediments. Photosynthetic parameters, including maximum photosynthetic rate (Pmax), photosynthetic efficiency (α) and compensating irradiance (Ic) were determined in short-term assays on live thalli after a 10 d exposure to 4 levels of CO2 partial pressures (pCO2; 491, 653, 982 and 1201 µatm) under saturating (300 µmol photons m-2 s-1) and sub-saturating (90 µmol photons m-2 s-1) irradiance in an aquaria study. Morphology …


On The Nature Of The Frontal Zone Of The Choctawhatchee Bay Plume In The Gulf Of Mexico, K. D. Huguenard, D. J. Bogucki, D. G. Ortiz-Suslow, N. J. M. Laxague, J. H. MacMahan, T. M. Ozgokmen, Brian K. Haus, A. J. H. M. Reniers, J. Hargrove, Alexander Soloviev, H. Graber 2016 University of Maine

On The Nature Of The Frontal Zone Of The Choctawhatchee Bay Plume In The Gulf Of Mexico, K. D. Huguenard, D. J. Bogucki, D. G. Ortiz-Suslow, N. J. M. Laxague, J. H. Macmahan, T. M. Ozgokmen, Brian K. Haus, A. J. H. M. Reniers, J. Hargrove, Alexander Soloviev, H. Graber

Marine & Environmental Sciences Faculty Articles

River plumes often feature turbulent processes in the frontal zone and interfacial region at base of the plume, which ultimately impact spreading and mixing rates with the ambient coastal ocean. The degree to which these processes govern overall plume mixing is yet to be quantified with microstructure observations. A field campaign was conducted in a river plume in the northeast Gulf of Mexico in December 2013, in order to assess mixing processes that could potentially impact transport and dispersion of surface material near coastal regions. Current velocity, density, and Turbulent Kinetic Energy Values, ε, were obtained using an Acoustic …


Gut Immunity In A Protochordate Involves A Secreted Immunoglobulin-Type Mediator Binding Host Chitin And Bacteria, Larry J. Dishaw, Brittany Leigh, John P. Cannon, Assunta Liberti, M. Gail Mueller, Diana P. Skapura, Charlotte R. Karrer, Maria R. Pinto, Rosaria De Santis, Gary W. Litman 2016 University of South Florida

Gut Immunity In A Protochordate Involves A Secreted Immunoglobulin-Type Mediator Binding Host Chitin And Bacteria, Larry J. Dishaw, Brittany Leigh, John P. Cannon, Assunta Liberti, M. Gail Mueller, Diana P. Skapura, Charlotte R. Karrer, Maria R. Pinto, Rosaria De Santis, Gary W. Litman

Marine Science Faculty Publications

Protochordate variable region-containing chitin-binding proteins (VCBPs) consist of immunoglobulin-type V domains and a chitin-binding domain (CBD). VCBP V domains facilitate phagocytosis of bacteria by granulocytic amoebocytes; the function of the CBD is not understood. Here we show that the gut mucosa of Ciona intestinalis contains an extensive matrix of chitin fibrils to which VCBPs bind early in gut development, before feeding. Later in development, VCBPs and bacteria colocalize to chitin-rich mucus along the intestinal wall. VCBP-C influences biofilm formation in vitro and, collectively, the findings of this study suggest that VCBP-C may influence the overall settlement and colonization of bacteria …


Begomovirus-Associated Satellite Dna Diversity Captured Through Vector-Enabled Metagenomic (Vem) Surveys Using Whiteflies (Aleyrodidae), Karyna Rosario, Christian Marr, Arvind Varsani, Simona Kraberger, Daisy Stainton, Enrique Moriones, Jane E Polston, Mya Breitbart 2016 University of South Florida

Begomovirus-Associated Satellite Dna Diversity Captured Through Vector-Enabled Metagenomic (Vem) Surveys Using Whiteflies (Aleyrodidae), Karyna Rosario, Christian Marr, Arvind Varsani, Simona Kraberger, Daisy Stainton, Enrique Moriones, Jane E Polston, Mya Breitbart

Marine Science Faculty Publications

Monopartite begomoviruses (Geminiviridae), which are whitefly-transmitted single-stranded DNA viruses known for causing devastating crop diseases, are often associated with satellite DNAs. Since begomovirus acquisition or exchange of satellite DNAs may lead to adaptation to new plant hosts and emergence of new disease complexes, it is important to investigate the diversity and distribution of these molecules. This study reports begomovirus-associated satellite DNAs identified during a vector-enabled metagenomic (VEM) survey of begomoviruses using whiteflies collected in various locations (California (USA), Guatemala, Israel, Puerto Rico, and Spain). Protein-encoding satellite DNAs, including alphasatellites and betasatellites, were identified in Israel, Puerto Rico, and Guatemala. Novel …


Spectral Sensitivity, Spatial Resolution And Temporal Resolution And Their Implications For Conspecific Signalling In Cleaner Shrimp, Eleanor M. Caves, Tamara M. Frank, Sonke Johnsen 2016 Duke University

Spectral Sensitivity, Spatial Resolution And Temporal Resolution And Their Implications For Conspecific Signalling In Cleaner Shrimp, Eleanor M. Caves, Tamara M. Frank, Sonke Johnsen

Marine & Environmental Sciences Faculty Articles

Cleaner shrimp (Decapoda) regularly interact with conspecifics and client reef fish, both of which appear colourful and finely patterned to human observers. However, whether cleaner shrimp can perceive the colour patterns of conspecifics and clients is unknown, because cleaner shrimp visual capabilities are unstudied. We quantified spectral sensitivity and temporal resolution using electroretinography (ERG), and spatial resolution using both morphological (inter-ommatidial angle) and behavioural (optomotor) methods in three cleaner shrimp species: Lysmata amboinensis,Ancylomenes pedersoni and Urocaridella antonbruunii. In all three species, we found strong evidence for only a single spectral sensitivity peak of (mean±s.e.m.) 518±5, 518±2 and …


Volumetric Flow Imaging Reveals The Importance Of Vortex Ring Formation In Squid Swimming Tail-First And Arms-First, Ian K. Bartol, Paul S. Krueger, Rachel A. Jastrebsky, Sheila Williams, Joseph T. Thompson 2016 Old Dominion University

Volumetric Flow Imaging Reveals The Importance Of Vortex Ring Formation In Squid Swimming Tail-First And Arms-First, Ian K. Bartol, Paul S. Krueger, Rachel A. Jastrebsky, Sheila Williams, Joseph T. Thompson

Biological Sciences Faculty Publications

Squids use a pulsed jet and fin movements to swim both arms-first (forward) and tail-first (backward). Given the complexity of the squid multi-propulsor system, 3D velocimetry techniques are required for the comprehensive study of wake dynamics. Defocusing digital particle tracking velocimetry, a volumetric velocimetry technique, and high-speed videography were used to study arms-first and tail-first swimming of brief squid Lolliguncula brevis over a broad range of speeds [0-10 dorsal mantle lengths (DML) s-1) in a swim tunnel. Although there was considerable complexity in the wakes of these multi-propulsor swimmers, 3D vortex rings and their derivatives were prominent reoccurring features …


Gascoyne Demersal Scalefish Managed Fishery, Department of Fisheries 2016 Department of Primary Industries and Regional Development, Western Australia

Gascoyne Demersal Scalefish Managed Fishery, Department Of Fisheries

Fisheries Occasional Publications

An operators’ guide to the management arrangements 1 September 2015 – 31 August 2016.


Biodiversity And You., Garth Woodruff 2016 Andrews University

Biodiversity And You., Garth Woodruff

Faculty Publications

No abstract provided.


Climate Controls Multidecadal Variability In U. S. Extreme Sea Level Records, Thomas Wahl, Don P. Chambers 2016 University of South Florida

Climate Controls Multidecadal Variability In U. S. Extreme Sea Level Records, Thomas Wahl, Don P. Chambers

Marine Science Faculty Publications

We investigate the links between multidecadal changes in extreme sea levels (expressed as 100 year return water levels (RWLs)) along the United States coastline and large‐scale climate variability. We develop different sets of simple and multiple linear regression models using both traditional climate indices and tailored indices based on nearby atmospheric/oceanic variables (winds, pressure, sea surface temperature) as independent predictors. The models, after being tested for spatial and temporal stability, are capable of explaining large fractions of the observed variability, up to 96% at individual sites and more than 80% on average across the region. Using the model predictions as …


Characterization Of Available Light For Seagrass And Patch Reef Productivity In Sugarloaf Key, Lower Florida Keys, Gerardo Toro-Farmer, Frank E. Muller-Karger, Maria Vega-Rodriguez, Nelson Melo, Kimberly Yates, Sergio Cerdeira-Estrada, Stanley R. Herwitz 2016 University of South Florida

Characterization Of Available Light For Seagrass And Patch Reef Productivity In Sugarloaf Key, Lower Florida Keys, Gerardo Toro-Farmer, Frank E. Muller-Karger, Maria Vega-Rodriguez, Nelson Melo, Kimberly Yates, Sergio Cerdeira-Estrada, Stanley R. Herwitz

Marine Science Faculty Publications

Light availability is an important factor driving primary productivity in benthic ecosystems, but in situ and remote sensing measurements of light quality are limited for coral reefs and seagrass beds. We evaluated the productivity responses of a patch reef and a seagrass site in the Lower Florida Keys to ambient light availability and spectral quality. In situ optical properties were characterized utilizing moored and water column bio-optical and hydrographic measurements. Net ecosystem productivity (NEP) was also estimated for these study sites using benthic productivity chambers. Our results show higher spectral light attenuation and absorption, and lower irradiance during low tide …


Does Dark-Spot Syndrome Experimentally Transmit Among Caribbean Corals?, Carly J. Randall, Adán Guillermo Jordán-Garza, Erinn M. Muller, Robert van Woesik 2016 Florida Institute of Technology

Does Dark-Spot Syndrome Experimentally Transmit Among Caribbean Corals?, Carly J. Randall, Adán Guillermo Jordán-Garza, Erinn M. Muller, Robert Van Woesik

Ocean Engineering and Marine Sciences Faculty Publications

Over the last half-century, coral diseases have contributed to the rapid decline of coral populations throughout the Caribbean region. Some coral diseases appear to be potentially infectious, yet little is known about their modes of transmission. This study experimentally tested whether dark-spot syndrome on Siderastrea siderea was directly or indirectly transmissible to neighboring coral colonies.We also tested whether open wounds were necessary to facilitate disease transmission. At the completion of the experiments, we sampled bacterial communities on diseased, exposed, and healthy coral colonies to determine whether bacterial pathogens had transmitted to the susceptible colonies.We saw no evidence of either direct …


Surfactant-Associated Bacteria In The Near-Surface Layer Of The Ocean, Naoko Kurata, Katie E. Vella, Bryan Hamilton, Mahmood S. Shivji, Alexander Soloviev, Silvia Matt, Aurelien Tartar, William Perrie 2016 Nova Southeastern University

Surfactant-Associated Bacteria In The Near-Surface Layer Of The Ocean, Naoko Kurata, Katie E. Vella, Bryan Hamilton, Mahmood S. Shivji, Alexander Soloviev, Silvia Matt, Aurelien Tartar, William Perrie

Marine & Environmental Sciences Faculty Articles

Certain marine bacteria found in the near-surface layer of the ocean are expected to play important roles in the production and decay of surface active materials; however, the details of these processes are still unclear. Here we provide evidence supporting connection between the presence of surfactant-associated bacteria in the near-surface layer of the ocean, slicks on the sea surface, and a distinctive feature in the synthetic aperture radar (SAR) imagery of the sea surface. From DNA analyses of the in situ samples using pyrosequencing technology, we found the highest abundance of surfactant-associated bacterial taxa in the near-surface layer below the …


Comparative Analysis Of Xenorhabdus Koppenhoeferi Gene Expression During Symbiotic Persistence In The Host Nematode, Ruisheng An, Parwinder Grewal 2016 The University of Texas Rio Grande Valley

Comparative Analysis Of Xenorhabdus Koppenhoeferi Gene Expression During Symbiotic Persistence In The Host Nematode, Ruisheng An, Parwinder Grewal

School of Earth, Environmental, & Marine Sciences Faculty Publications

Species of Xenorhabdus and Photorhabdus bacteria form mutualistic associations with Steinernema and Heterorhabditis nematodes, respectively and serve as model systems for studying microbe-animal symbioses. Here, we profiled gene expression of Xenorhabdus koppenhoeferi during their symbiotic persistence in the newly formed infective juveniles of the host nematode Steinernema scarabaei through the selective capture of transcribed sequences (SCOTS). The obtained gene expression profile was then compared with other nematode-bacteria partnerships represented by Steinernema carpocapsae-Xenorhabdus nematophila and Heterorhabditis bacteriophora-Photorhabdus temperata. A total of 29 distinct genes were identified to be up-regulated and 53 were down-regulated in X. koppenhoeferi while in S. scarabaei infective …


Branch Shape, Charles Messing 2016 Nova Southeastern University

Branch Shape, Charles Messing

Character and Character State Guides

No abstract provided.


Calice, Charles Messing 2016 Nova Southeastern University

Calice, Charles Messing

Character and Character State Guides

No abstract provided.


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