Life Sciences Commons^™

Assessing The Activity Of Antimicrobial Peptides Against Common Marine Bacteria Located In Rotifer (Brachionus Plicatilis) Cultures, Chelsea Woods, Lindsey Woolley, Gavin Partridge, Mengqi Chen, Evan F. Haney, Robert E.W. Hancock, Nicky Buller, Andrew Currie

Fisheries Research Articles

Rotifers are used as the first feed for marine fish larvae and are grown in large cultures that have high loads of organic matter and heterotrophic bacteria; these bacteria are passed on to the developing fish larvae and can potentially lead to bacterial infections. A modified minimum inhibitory concentration (MIC) protocol for antimicrobial peptides was used to determine the potency of ten antimicrobial peptides (AMPs) in artificial seawater relevant to a rotifer culture (salinity of 25‰) against common marine pathogens. All of the AMPs had antimicrobial activity against the bacterial isolates when the salt concentration was approximately zero. However, in …

Development Of Monoclonal Antibodies Against Perkinsus Olseni Using Whole Cells, Eliot Hanrio, Jacqueline Batley, Kathleen Davern, Cecile Dang

Fisheries Research Articles

The genus Perkinsus is comprised of multiple species, notably P. olseni and P. marinus that are on the list of notifiable pathogens of the World Organisation for Animal Health. These protozoans are responsible for mass mortalities in mollusc populations worldwide. Current diagnostic tests for these parasites include incubation in Ray’s fluid thioglycollate medium associated with microscopy, and molecular assays such as PCR or qPCR using species-specific primers, which can be time and labour consuming. To simplify the detection of Perkinsus spp. infections, the current study developed monoclonal antibodies with strong potential for diagnostic use in immunoassays. Mice were immunised with …

Chiral Analysis Of Methamphetamine In Hair Samples, Kristen Payes

Student Theses

Methamphetamine (MAMP) is a highly addictive illicit drug typically abused for its nervous system stimulating effects. Conversely, methamphetamine has therapeutic use treating attention deficit hyperactivity disorder, controlling appetite and assisting with weight loss, and is available as the pure l-isomer in over-the-counter (OTC) nasal inhalers due to its decongestant activity. Because l-methamphetamine (l-MAMP) is available in OTC form, forensic guidelines require a sample to contain greater than 20% d-methamphetamine (d-MAMP) when classifying results as consistent with illicit MAMP use. Chiral chromatographic analysis is capable of distinguishing between l-MAMP and d-MAMP. This …

Women's Health: Optimal Nutrition Throughout The Lifecycle, Edith J M Feskens, Regan Bailey, Zulfiqar Ahmed Bhutta, Hans-Konrad Biesalski, Heather Eicher-Miller, Klaus Krämer, Wen-Harn Pan, James C. Griffiths

Department of Paediatrics and Child Health

Sex differences are an important consideration when researching and establishing policies for nutrition and optimal health. For women's health, there are important physiologic, neurologic, and hormonal distinctions throughout the lifecycle that impact nutritional needs. Distinct from those for men, these nutritional needs must be translated into appropriate nutrition policy that aims to not only avoid overt nutritional deficiency, but also to promote health and minimize risk for chronic disease. Through a series of webinars, scientific experts discussed the advances in the understanding of the unique nutritional needs, challenges and opportunities of the various life stages for women across the life …

Using Occupancy Modeling To Estimate American Marten Distribution In Michigan’S Lower Peninsula, Maria N. Weston

Masters Theses

The current distribution American marten (Martes americana) in the Lower Peninsula of Michigan, USA is largely unknown. We used detection-nondetection data from a large-scale camera trap study encompassing 27,371km² of public lands on within the 1836 Ceded Territory to estimate marten occurrence across Michigan’s Northern Lower Peninsula. We modeled marten detection probability and occupancy as a function of covariates from two summer season that took place in 2019 and 2020. Model averaged predictions indicate high occupancy probabilities (ψ > 90%) when agricultural land was low (< 12% per 8km²) and canopy cover was high (> 85% per 8 km …

Comparative Studies Between The Murine Immortalized Brain Endothelial Cell Line (Bend.3) And Induced Pluripotent Stem Cell-Derived Human Brain Endothelial Cells For Paracellular Transport, Jiahong Sun, Weijun Ou, Derick Han, Annlia Paganini-Hill, Mark J. Fisher, Rachita K. Sumbria

Pharmacy Faculty Articles and Research

Brain microvascular endothelial cells, forming the anatomical site of the blood-brain barrier (BBB), are widely used as in vitro complements to in vivo BBB studies. Among the immortalized cells used as in vitro BBB models, the murine-derived bEnd.3 cells offer culturing consistency and low cost and are well characterized for functional and transport assays, but result in low transendothelial electrical resistance (TEER). Human-induced pluripotent stem cells differentiated into brain microvascular endothelial cells (ihBMECs) have superior barrier properties, but the process of differentiation is time-consuming and can result in mixed endothelial-epithelial gene expression. Here we performed a side-by-side comparison of the …

Determinants Of Cognitive Health Among Aging Adults In Agincourt, South Africa, Bria Brown

Journal of Global Awareness

This study examines influences on cognitive health, showing how aging increases the odds of cognitive impairment by focusing on orientation to time and person among aging adults in Agincourt, South Africa. The Health and Aging in Africa: A Longitudinal Study of an INDEPTH Community in SA (HAALSI) Cohort from the Agincourt data set was used. Binary logistic regression analysis examined factors associated with cognition. Ability to read and/or write positively correlated with the correct recall of year, month, and date. Marital status, HIV status, and hypertension negatively correlated with the correct recall of year, month, and date. Correct recall of …

Contextualizing The Impact Of Faculty-Led Short-Term Study Abroad On Students’ Global Competence: Characteristics Of Effective Programs, Colleen Fisher, Laurel Iverson Hitchcock, Ashley Neyer, Stacy C. Moak, Sarah Moore, Scott Marsalis

Journal of Global Awareness

Short-term faculty-led study abroad programs are high-impact pedagogical practices designed to enhance students' global competency. However, there is a gap in our understanding regarding the specific educational components of short-term faculty-led study abroad programs that promote global competency. This systematic review examined nearly two decades of research on such programs (n=86) to assess the educational components associated with increases in students' global competencies using Steinberg's (2017) educational components as a framework. Results indicated that the educational components included in global competency-building education abroad courses varied substantially across programs and global regions. The components most strongly supporting enhanced global competency were …

Notes From The Editor, Jay Nathan

Journal of Global Awareness

No abstract provided.

Prediction Of Functional Threshold Power From Graded Exercise Test Data In Highly-Trained Individuals, Eanna Mc Grath, Bernard Donne, Alessio Benavoli, Neil Fleming, Nicholas Mahony

International Journal of Exercise Science

International Journal of Exercise Science 15(4): 747-759, 2022. The purpose of the current investigation was to derive an equation that could predict Functional Threshold Power (FTP) from Graded Exercise Test (GxT) data. The FTP test has been demonstrated to represent the highest cycling power output that can be maintained in a quasi-steady state for 60-min. Previous investigations to determine a comparable marker derived from a Graded Exercise test have had limited success to date. Consequently, the current study aimed to predict FTP from GxT data to provide an additional index of cycling performance. FTP has been reported to provide an …

An Examination Of Two Resistance Training Frequency Techniques In Morphological And Functional Adaptations Of The Patellar Tendon., Tiago Volpi Braz, Danilo Rodrigues Batista, Julio Benvenutti Bueno De Camargo, Luan Oenning Col, Wellington Gonçalves Dias, Guilherme Borsetti Businari, Jhenipher Moniky Rosolem, Felipe Alves Brigatto, Paulo Henrique Barbosa, Charles Ricardo Lopes

International Journal of Exercise Science

International Journal of Exercise Science 15(4): 709-720, 2022. The aim of the present study was to investigate the effects of distinct resistance training frequencies with equated-volume conditions in morphological and functional adaptations of the patellar tendon. Twenty-seven recreationally resistance-trained subjects (men [n=17] and women [n=10]) (age: 20.8 ± 1.9 years [range 18 to 25 years]; height: 1.73 ± 9.8 cm; total body mass = 73.2 ± 11.7 kg; previous RT experience = 3.3 ± 1.6 years) volunteered to participate in this study. A total of 16 training sessions were performed during the study period. Each subject’s leg was randomly allocated …

Effects Of Two Different Exercise Training Programs Periodization On Anthropometric And Functional Parameters In People Living With Hiv: A Randomized Clinical Trial, Weverton Fonseca Soares, Vitor Lopes Soares, Hugo Ribeiro Zanetti, Fernando Freitas Neves, Mário Leon Silva-Vergara, Edmar Lacerda Mendes

International Journal of Exercise Science

International Journal of Exercise Science 15(3): 733-746, 2022. The purpose of this study was to investigate the effects of two different exercise training programs periodization on anthropometric and functional parameters in people living with HIV (PLHIV). This was a randomized clinical trial that involved participants (n = 31) living with HIV aged over 18 years and undergoing antiretroviral therapy which were randomized to periodized exercise training (PET; n = 13), non-periodized exercise training (NPET; n = 13), or control group (CON; n = 15). The PET and NPET groups performed 12 weeks of combined training while the CON group …

The Relationship Between Eating Disorders, Weight Control Methods, And Body Satisfaction In Elite Female Runners Competing At The 2020 U.S. Olympic Marathon Trials, Sophia Charitou, Kelly Pritchett, Dana Ogan, Abigail Larson

International Journal of Exercise Science

International Journal of Exercise Science 15(2): 721-732, 2022. Athletes participating in endurance sports report frequent attempts to lose weight and greater training volumes in attempt to gain a competitive advantage. Increased exercise energy expenditure through training, weight periodization, and prevalence of eating disorder (ED) may affect energy availability. Low energy availability (LEA) is associated with negative physiological effects and an increased risk of bone fractures and illness in athletes. This study investigated the relationship between self-reported history of an ED with training, body satisfaction, and weight-control methods among female Olympic marathon trials participants. Female runners (n = 146; 30.8 …

Evaluating The Brain-Enhancing Mitohormesis Of N-Propargylglycine, A Suicide Inhibitor Of Proline Dehydrogenase, To Offset The Proteotoxic Mechanisms Underlying Neurodegeneration In Huntington’S Disease And Evaluating The Phenotype Of A Mutant Pdia3 Knock-In Mouse Line As A Novel Genetic Model Of Neurological Disorders, Fadzai Teramayi

Natural Sciences and Mathematics | Biological Sciences Master's Theses

Huntington’s Disease (HD) is characterized by atrophy of the striatal and cerebral cortical neurons producing a variety of severe, and life-shortening neurologic symptoms including motor dysfunction, cognitive decline, psychiatric disturbances, and weight loss. As with other life-threatening neurodegenerative disorders, HD has no effective treatment capable of preventing or mitigating its underlying hallmark, subcellular and pathogenetic mechanism, that is, proteotoxicity. While it has been suggested that inducing brain mitohormesis might offer a promising therapeutic strategy, to date, no brain-penetrating mitohormesis-inducing agent has yet been identified or tested in any neurodegenerative disease mouse model. Recently, N-propargylglycine (N-PPG) was shown …

An Investigation On The Impact Of Intestinal Oxygen Availability On Survival And Regulation Of Virulence In Listeria Monocytogenes, Damayanti Chakravarty

Dissertations

The deadly foodborne pathogen Listeria monocytogenes is a gram positive facultative anaerobic bacterium. It is the third leading cause of death from food-borne illnesses. Once ingested, it encounters various stressors in the gastrointestinal (GI) tract, including acidic pH, bile, and alterations in oxygen availability. Various studies have been done regarding the pathogen’s survival mechanism against acid and bile. Since the lower parts of the GI tract are anaerobic, it is imperative to investigate how physiologically relevant anaerobic conditions impact L. monocytogenes’s survival. Transcriptomic analysis of L. monocytogenes under conditions mimicking the GI tract was performed. A large number of genes …

Noxious Cellular Injury Triggers An Oxidative Stress Gene Response, Shawyun Khoshneviszadeh

Master of Science in Integrative Biology Theses

Wound and regeneration involves a series of complex processes that can induce oxidative stress by elevating intracellular reactive oxygen species (ROS) levels. In this study, we used RNA-seq and qPCR to examine the molecular signature of Human Embryonic Kidney cells (HEK-293T) stimulated with Crotalus atrox (CA) venom. NGS data was assembled and annotated utilizing the Illumina paired-end RNA-seq approach with software packages HISAT2 and StringTie. Results showed 243 genes were differentially expressed (106 upregulated, 137 downregulated) between CA venom stimulated and non-stimulated cells (p<0.05). HEK-293T stimulated with CA venom for 4 hours showed an increase in the expression of oxidative stress response genes (e.g., TOMM6, EGR (1,2,3), HSP70 (1A, 1B), SPRY4, ETV5, and EMP1) (Fold-Change (fc) >2.0). Significantly downregulated genes were associated with many novel transcripts/proteins such as AC117378, AD000671, and AC023509. …

Female Presence Does Not Increase Testosterone But Still Ameliorates Sickness Behaviours In Male Japanese Quail, Brenna M. G. Gormally, Kaelyn Bridgette, Aubrey Emmi, Delilah Schuerman, Patricia C. Lopes

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Infections can dramatically modify animal behaviour. The extent of these changes depends on an animal's environment. It has been proposed that testosterone modulates the suppression of behavioural symptoms of sickness under certain reproductive contexts. To further understand the role played by testosterone in modulating sickness behaviours under reproductive contexts, we studied a species, the Japanese quail, in which female exposure rapidly decreases circulating testosterone in males. Males received either an immune challenge (lipopolysaccharide – LPS) or a control injection and their behaviours, mass change and testosterone levels were quantified in the presence or absence of a female. Both the presence …

Association Study Between Mucin 4 (Muc4) Polymorphisms And Idiopathic Recurrent Pregnancy Loss In A Korean Population, Young-Ran Kim, Eun-Hee Ahn, Nam-Keun Kim

Faculty, Staff and Student Publications

Recurrent pregnancy loss (RPL) is the loss of two or more consecutive pregnancies before 20 weeks of gestational age. Our study investigated whether mucin 4 (MUC4) polymorphisms are associated with RPL. MUC polymorphisms (rs882605 C>A, rs1104760 A>G, rs2688513 A>G, rs2258447 C>T, and rs2291652 A>G) were genotyped in 374 women with RPL and 239 controls of Korean ethnicity using polymerase chain reaction-restriction fragment length polymorphism analysis and the TaqMan probe SNP genotyping assay. Differences in genotype frequencies between cases of RPL and the controls were compared. MUC4 rs882605 C>A and rs1104760 A>G polymorphisms were …

A Nickase Cas9 Gene-Drive System Promotes Super-Mendelian Inheritance In Drosophila

Faculty, Staff and Student Publications

CRISPR-based gene-drives have been proposed for managing insect populations, including disease-transmitting mosquitoes, due to their ability to bias their inheritance toward super-Mendelian rates (>50%). Current technologies use a Cas9 that introduces DNA double-strand breaks into the opposing wild-type allele to replace it with a copy of the gene-drive allele via DNA homology-directed repair. However, the use of different Cas9 versions is unexplored, and alternative approaches could increase the available toolkit for gene-drive designs. Here, we report a gene-drive that relies on Cas9 nickases that generate staggered paired nicks in DNA to propagate the engineered gene-drive cassette. We show that …

Cysteine Metallochemistry And Metal Binding: Quantification Of The Thermodynamic Foundations Of Cellular Homeostasis, Matthew R. Mehlenbacher

Dartmouth College Ph.D Dissertations

Metals are required for life. Many metalloproteins contain cysteine in their metal-binding site (MBS) and cysteines are unique in that they are reactive, and strongly bind certain metals, which aid in metal selectivity and specificity. Using isothermal titration calorimetry (ITC), the thermodynamic foundation for metal binding, cellular protection, and transcriptional regulation, which all utilize cysteines in their MBS, are quantified.

In bacteria there are metalloprotein pathways that actively uptake mercury, which are regulated by the metalloregulatory protein MerR. MerR de-represses the transcription of these mer proteins in a metal-dependent manner. Using ITC, the thermodynamic foundation of the negative allosteric coupling …

Casm-Amfmnet: A Network Based On Coordinate Attention Shuffle Mechanism And Asymmetric Multi-Scale Fusion Module For Classification Of Grape Leaf Diseases, Jiayu Suo, Jialei Zhan, Guoxiong Zhou, Aibin Chen, Yaowen Hu, Weiqi Huang, Weiwei Cai, Yahui Hu, Liujun Li

Civil, Architectural and Environmental Engineering Faculty Research & Creative Works

Grape disease is a significant contributory factor to the decline in grape yield, typically affecting the leaves first. Efficient identification of grape leaf diseases remains a critical unmet need. To mitigate background interference in grape leaf feature extraction and improve the ability to extract small disease spots, by combining the characteristic features of grape leaf diseases, we developed a novel method for disease recognition and classification in this study. First, Gaussian filters Sobel smooth de-noising Laplace operator (GSSL) was employed to reduce image noise and enhance the texture of grape leaves. A novel network designated coordinated attention shuffle mechanism-asymmetric multi-scale …

Transcriptional Analysis Of Maize Under Drought Stress And The Impact Of Plant Maturity, Oliver J. Oviedo

Biology ETDs

Climate change related drought is projected to harm maize production. Water use strategies can help mitigate the impact of drought on crop yield. However, little is known about maize metabolic response to drought at different developmental stages. To shed light on this, drought conditions were applied to maize at the six-leaf stage (V6), twelve leaf stage (V12), and tassel stage (VT). V6 and VT took eight days to achieve a low stomatal conductance threshold, but V12 took 16 days. Differential gene expression analysis of the transcriptome indicates that V6 showed the most response with 53 impacted metabolic pathways, many of …

Impact Of Estrogen Receptor Expression On Prognosis Of Ovarian Cancer According To Antibody Clone Used For Immunohistochemistry: A Meta-Analysis, Chun Wai Ng, Kwong-Kwok Wong

Faculty, Staff and Student Publications

Background: The prognostic value of the expression of estrogen receptor (ER) subtypes ER⍺ and ERβ in ovarian cancer has previously been evaluated by meta-analyses. However, the results are contradictory and controversial.

Methods: We conducted an updated meta-analysis with stringent inclusion criteria to ensure homogeneous studies to determine the effect of ER subtypes on ovarian cancer prognosis. Articles were retrieved by systematic search of PubMed and Web of Science for articles dated up to June 2021. Only studies with known hazard ratio (HR) and antibody clone for immunochemistry (IHC) were included. Pooled HRs with the corresponding 95% confidence intervals (CIs) were …

Characteristics And Outcomes Of Patients With Blastic Plasmacytoid Dendritic Cell Neoplasm Treated With Frontline Hcvad, Naveen Pemmaraju, Nathaniel R Wilson, Guillermo Garcia-Manero, Koji Sasaki, Joseph D Khoury, Gautam Borthakur, Naval Daver, Tapan Kadia, Courtney Dinardo, Elias Jabbour, Sherry Pierce, Muzaffar Qazilbash, Marina Konopleva, Hagop Kantarjian

Faculty, Staff and Student Publications

Blastic plasmacytoid dendritic cell neoplasm (BPDCN) is a clinically aggressive blood cancer, often involving the skin, bone marrow, lymph nodes, and central nervous system (CNS) in 20% to 30% of patients. Despite significant progress in CD123- and BCL-2-targeted therapy, most patients are not cured without hematopoietic stem cell transplant (HSCT), and CNS relapses occur quite frequently. Combination approaches with targeted and chemotherapy agents plus incorporation of prophylactic CNS-directed therapy are urgently needed. In this setting, we sought to analyze outcomes using the cytotoxic chemotherapy backbone regimen hyperfractionated cyclophosphamide, vincristine, adriamycin, and dexamethasone (HCVAD). We conducted a retrospective analysis of patients …

A New Scorpion Genus And Species From China, Qianxie Solegladi Gen. Et Sp.N. (Scorpiones: Pseudochactidae), Victoria Tang

Euscorpius

A new monotypic genus belonging to the basal scorpion family Pseudochactidae Gromov, 1998, Qianxie solegladi gen et. sp. n., is described from Yunnan Province of China. The family is recorded from China for the first time, vastly extending its known geographic range. The new genus shares morphological characters with both Pseudochactas Gromov, 1998 and Troglokhammouanus Lourenço, 2007. It differs from Pseudochactas and is similar to Troglokhammouanus in the shapes of anterior and posterolateral carapace margins, form of the circumocular sutures, distance between median ocelli, development of dorsoventral projection of patella, length of tarsal spinules, recurvature of the lateral margins and …

A New Insight Into Fungal Cell Wall Architecture By Functional Genomics And Solid-State Nmr Along With Recent Advancements In Dynamic Nuclear Polarization For Analyzing Biomolecules, Arnab Chakraborty

LSU Master's Theses

This dissertation summarizes the findings related to the way by which supramolecular architecture of fungal cell wall changes with genetic mutation, dispensing genes responsible for biosynthesis of cell wall polysaccharides. This is necessary because without perfect picture of how supramolecular assembly changes with genetic mutation it is hard to assess new anti-fungal targets. Alongside this we have highlighted how recent advancement into Dynamic Nuclear Polarization (DNP) methods improved characterization of biomolecules both in case of labeled and unlabeled samples.

First study utilized Solid-state NMR (SSNMR) which is a non-destructive technique hence enabled us for the first time to deduce how …

The Impact Of Exercise On The Mental Health Of College Students In The United States, Maryam Eltomy

Kean Quest

Student mental health and well-being are a significant and growing concern on college campuses across the United States. As a result, to better meet students' mental health demands and decrease strain on existing services, the current quantitative research focused on exploring the impact of exercise on a college student’s mental health. An online survey involving Kean University students was conducted and information was primarily gathered through an online questionnaire. Approximately, 40 students were randomly selected to participate in this research study. The results of the study revealed that participants felt that consistent exercise was beneficial in helping reduce their mental …

Our Past Creates Our Present: A Brief Overview Of Racism And Colonialism In Western Paleontology, Pedro M. Monarrez, Joshua B. Zimmt, Annaka M. Clement, William Gearty, John J. Jacisin, Kelsey M. Jenkins, Kristopher M. Kusnerik, Ashley W. Poust, Selina V. Robson, Judith A. Sclafani, Kelsey T. Stilson, Shamindri D. Tennakoon, Carmi Milagros Thompson

School of Biological Sciences: Faculty Publications

As practitioners of a historical science, paleontologists and geoscientists are well versed in the idea that the ability to understand and to anticipate the future relies upon our collective knowledge of the past. Despite this understanding, the fundamental role that the history of paleontology and the geosciences plays in shaping the structure and culture of our disciplines is seldom recognized and therefore not acted upon sufficiently. Here, we present a brief review of the history of paleontology and geology in Western countries, with a particular focus on North America since the 1800s. Western paleontology and geology are intertwined with systematic …

Cognitive Task Enhancement Through Alpha Neurofeedback, Hannah L. Meyer, Douglas Peterson

Honors Thesis

Neurofeedback training has been a recent field of study in neuroscience, as a potential way to increase focus, and possibly boost cognitive performance. Most studies utilize a course of neurofeedback training sessions to find positive results in decreasing ADHD symptoms, depression symptoms, as well as further cognitive changes. In this study, we aim to determine the efficacy of a single session of neurofeedback training in increasing cognitive performance. To do so, we randomly separated 42 volunteers into either a control or experimental group. The experimental group participated in an n-back task both before and after an alpha neurofeedback training session, …

Studying Tissue Specific Diversity Of Splicing Regulator Muscleblind, Davron Hanley

Master of Science in Integrative Biology Theses

The muscleblind (mbl) family of RNA-binding proteins regulates alternative splicing, determining mRNA transcript composition for various types of tissue, and has been implicated in myotonic dystrophy. The mbl gene is subject to alternative splicing in Drosophila, leading to multiple isoforms, and has several paralogs in humans. Mbl proteins vary significantly in length, although the significance of such diversity and the role of specific isoforms have not been fully explored. Using immunofluorescence microscopy and polyclonal serum, we analyzed Mbl protein expression across adult Drosophila tissues. Mbl was detected in various locations, including the brain, gonads, muscle, and gut epithelium. Skeletal muscles …