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Full-Text Articles in Life Sciences

Evolutionary Conservation Of Midline Axon Guidance Activity Between Drosophila And Tribolium Frazzled, Piyasi Ghosh, Benjamin C. Wadsworth, Logan Terry, Timothy A. Evans Mar 2026

Evolutionary Conservation Of Midline Axon Guidance Activity Between Drosophila And Tribolium Frazzled, Piyasi Ghosh, Benjamin C. Wadsworth, Logan Terry, Timothy A. Evans

Biological Sciences Faculty Publications and Presentations

The regulation of midline crossing of axons is of fundamental importance for the proper development of nervous system connectivity in bilaterian animals. A number of conserved axon guidance signaling pathways coordinate to attract or repel axons at the nervous system midline to ensure the proper regulation of midline crossing. The attractive Netrin-Frazzled/DCC (Net-Fra) signaling pathway is widely conserved among bilaterians, but it is not clear whether the mechanisms by which Net and Fra promote midline crossing are also conserved. In Drosophila, Fra can promote midline crossing via Netrin-dependent and Netrin-independent mechanisms, by acting as a canonical midline attractive receptor and …


Unpacking Drivers Of Heterotrophic N2 Fixation Across Aquatic Redox Gradients: A Mathematical Model With Bioenergetic And Stoichiometric Constraints, Corday R. Selden, Rebecca A. Everett, Halvor M. Halvorson, Megan Berberich, Luca Schenone, Angela Peace, Renn Schipper, Edwin Cruz-Rivera, James Powell, Keisuke Inomura, Robinson W. Fulweiler, Amy Marcarelli, J. Thad Scott Mar 2026

Unpacking Drivers Of Heterotrophic N2 Fixation Across Aquatic Redox Gradients: A Mathematical Model With Bioenergetic And Stoichiometric Constraints, Corday R. Selden, Rebecca A. Everett, Halvor M. Halvorson, Megan Berberich, Luca Schenone, Angela Peace, Renn Schipper, Edwin Cruz-Rivera, James Powell, Keisuke Inomura, Robinson W. Fulweiler, Amy Marcarelli, J. Thad Scott

Michigan Tech Publications

N2 fixation by aquatic organoheterotrophs supplies bioavailable nitrogen to the biosphere and thereby supports ecosystem production; yet the factors which drive this activity are poorly understood. Here, we present a generalized chemostat model to investigate stoichiometric and energetic constraints on free-living heterotrophic diazotrophs across gradients in redox state, resource quantity/quality, and resource stoichiometry. The model couples nutrient uptake and allocation functions to predict elemental fluxes with an energy dissipation model to calculate growth efficiency. After constraining model parameters with relevant culturing (e.g., Azotobacter) and environmental literature, we assessed model sensitivity to these parameters using Latin Hypercube Sampling and the statistical …


Assessment Of Aluminum-Based Drinking Water Treatment Residuals From Multiple Utilities In The United States As Green Sorbents For Pfas, Parisa Javidan, Roxana Rahmati, Zhiming Zhang, Anshuman Satpathy, Steven Larson, Rupali Datta, Dibyendu Sarkar Mar 2026

Assessment Of Aluminum-Based Drinking Water Treatment Residuals From Multiple Utilities In The United States As Green Sorbents For Pfas, Parisa Javidan, Roxana Rahmati, Zhiming Zhang, Anshuman Satpathy, Steven Larson, Rupali Datta, Dibyendu Sarkar

Michigan Tech Publications

Per- and polyfluoroalkyl substances (PFAS) are persistent environmental contaminants causing human health concerns. In this study, five aluminum-based drinking water treatment residuals (Al-WTRs) were evaluated as green adsorbents for the removal of perfluorooctanoic acid (PFOA) and perfluorooctanesulfonic acid (PFOS) from water. Al-WTRs are nonhazardous solid wastes generated during the coagulation process of water treatment using aluminum salts or polymers. Although high PFAS adsorption capacity of Al-WTRs generated in one facility in the US has been reported, no study exists assessing PFAS adsorption capabilities of WTRs generated in multiple facilities using various types of aluminum coagulants. Batch adsorption experiments of PFOA …


Utah Farmers Markets Impact Report: Strengthening Local Food Systems, Economic Resilience, And Community Well-Being, Jaclyn Pace, Steven Price, Roslynn Brain-Mccann, Joshua Cafferty, Blue Cook Mar 2026

Utah Farmers Markets Impact Report: Strengthening Local Food Systems, Economic Resilience, And Community Well-Being, Jaclyn Pace, Steven Price, Roslynn Brain-Mccann, Joshua Cafferty, Blue Cook

All Current Publications

Utah's farmers markets are more than places to shop — they are essential community infrastructure. With more than 60 markets in operation across the state, people rely on their local market for food, leisure, and community connection. From 2023–2025, the Utah Farmers Market Network (UFMN) and Utah State University (USU) Extension led a three-year, mixed-methods evaluation to document the economic and social contributions of farmers markets across the state. Over three market seasons, more than 230,000 customer responses were collected at markets in St. George, Cedar City, Hurricane, Ogden, Murray, Wheeler Farm, Millcreek, Downtown Salt Lake City, and Price — …


Evaluation Of Publicly Available Maize Germplasm Adaptation To Environments In Nebraska, Garrett Snodgrass Mar 2026

Evaluation Of Publicly Available Maize Germplasm Adaptation To Environments In Nebraska, Garrett Snodgrass

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Publicly available maize germplasm represents an important resource for breeding programs seeking to expand genetic diversity and improve hybrid performance. However, effective use requires characterization of per se phenotypic performance of parental lines and evaluation of the parental line’s hybrid progeny adaptation to a given target population of environments. Furthermore, understanding population structure and heterotic grouping is imperative for maximizing efficiency of breeding decisions. The objectives of this study were to (1) evaluate phenotypic performance of parental lines and hybrids across environments in Nebraska, and to (2) refine heterotic group classification of parental lines within the University of Nebraska-Lincoln’s Hybrid …


Arkansas Soybean Performance Tests 2025, J. F. Carlin, T R. Faske, T L. Roberts, T. N. Spurlock, T. D. Swanson, R. D. Bond, J. C. Mccoy, C. J. Bulloch Mar 2026

Arkansas Soybean Performance Tests 2025, J. F. Carlin, T R. Faske, T L. Roberts, T. N. Spurlock, T. D. Swanson, R. D. Bond, J. C. Mccoy, C. J. Bulloch

Arkansas Agricultural Experiment Station Research Series

Soybean variety and strain performance tests are conducted each year in Arkansas by the University of Arkansas System Division of Agriculture’s Arkansas Crop Variety Improvement Program. The tests provide information to companies developing varieties and/ or marketing seed within the state and aid the Arkansas Cooperative Extension Service in formulating variety recommendations for soybean producers.


Wellness Connection Newsletter March 2026, Roger Williams University School Of Law Mar 2026

Wellness Connection Newsletter March 2026, Roger Williams University School Of Law

Life of the Law School (1993- )

No abstract provided.


Farmers Markets As Community Infrastructure: Evidence From A Three-Year Statewide Data Project In Utah, Jaclyn Pace, Roslynn Mccann, Blue Cook, Steven Price, Lorali Smith, Dianna Parkynn, Joshua Cafferty Mar 2026

Farmers Markets As Community Infrastructure: Evidence From A Three-Year Statewide Data Project In Utah, Jaclyn Pace, Roslynn Mccann, Blue Cook, Steven Price, Lorali Smith, Dianna Parkynn, Joshua Cafferty

Outcomes and Impact Quarterly

Utah farmers markets play a critical role in food access, small business viability, and community connection, yet limited statewide data document their impact. The Utah Farmers Market Network (UFMN) and Utah State University (USU) Extension conducted a mixed-methods evaluation (2023–2025) and found that farmers markets make valuable contributions to the community.


The Role Of Top-Down Appetite Self-Regulation In The Development Of Healthy Eating Behaviors Among Children: A Narrative Review And Socialization Framework, David J Bridgett, Sheryl O Hughes, Matthew Broussard, Daniela Mccourt, Christina M Croce, Jennifer O Fisher Mar 2026

The Role Of Top-Down Appetite Self-Regulation In The Development Of Healthy Eating Behaviors Among Children: A Narrative Review And Socialization Framework, David J Bridgett, Sheryl O Hughes, Matthew Broussard, Daniela Mccourt, Christina M Croce, Jennifer O Fisher

Children’s Nutrition Research Center Staff Publications

Appetite self-regulation (ASR) among children is thought to have a fundamental role in shaping the development of healthy eating behaviors, dietary intake, and growth during childhood. Parallel to developmental frameworks for understanding "general" self-regulation among children, ASR has been described as involving children's use of "top-down" cognitive processes to moderate "bottom-up" biological drives around food approach and avoidance in the interest of achieving desired eating behaviors or outcomes. Whereas bottom-up ASR processes during early childhood are well characterized, particularly in the context of dysregulation and obesity risk, the role of top-down ASR processes in the development of healthy eating behaviors …


Pre- And Postnatal Exposure To Pm2.5 And No2 And Blood Pressure In Children: Results From The Echo Cohort, Yu Ni, Andrew Law, Xingyu Gao, Adam A Szpiro, Christine T Loftus, Miranda Jones, Logan C Dearborn, Marnie F Hazlehurst, Allison R Sherris, Sindana Ilango, Kaja Z Lewinn, Nicole R Bush, Qi Zhao, Leonardo Trasande, Joseph T Flynn, Daniel A Enquobahrie, Ruby H N Nguyen, Tom O'Connor, Arpita K Vyas, Mingyu Zhang, Hooman Mirzakhani, Alison Hipwell, Anne Starling, Alicia K Peterson, Akhgar Ghassabian, Assiamira Ferrara, Judy Aschner, Scott Collingwood, Margaret R Karagas, Michelle Katzow, Annemarie Stroustrup, Mehtap Haktnair, Tina V Hartert, Brittney M Snyder, Sophia Jan, Anne Marie Singh, Dana Dabelea, Angela M Malek, Jennifer K Straughen, Carlos A Camargo, Miatta A Buxton, Rosalind Wright, Kecia Carroll, Keia Sanderson, Daphne Koinis Mitchell, Viren D'Sa, Christine Hockett, Anne L Dunlop, Shohreh F Farzen, Sunni L Mumford, Akram N Alshawabkeh, Hudson P Santos, Xueying Zhang, Zhongzheng Niu, Nan Ji, Carrie Breton, Donghai Liang, Catherine J Karr, Echo Cohort Consortium Mar 2026

Pre- And Postnatal Exposure To Pm2.5 And No2 And Blood Pressure In Children: Results From The Echo Cohort, Yu Ni, Andrew Law, Xingyu Gao, Adam A Szpiro, Christine T Loftus, Miranda Jones, Logan C Dearborn, Marnie F Hazlehurst, Allison R Sherris, Sindana Ilango, Kaja Z Lewinn, Nicole R Bush, Qi Zhao, Leonardo Trasande, Joseph T Flynn, Daniel A Enquobahrie, Ruby H N Nguyen, Tom O'Connor, Arpita K Vyas, Mingyu Zhang, Hooman Mirzakhani, Alison Hipwell, Anne Starling, Alicia K Peterson, Akhgar Ghassabian, Assiamira Ferrara, Judy Aschner, Scott Collingwood, Margaret R Karagas, Michelle Katzow, Annemarie Stroustrup, Mehtap Haktnair, Tina V Hartert, Brittney M Snyder, Sophia Jan, Anne Marie Singh, Dana Dabelea, Angela M Malek, Jennifer K Straughen, Carlos A Camargo, Miatta A Buxton, Rosalind Wright, Kecia Carroll, Keia Sanderson, Daphne Koinis Mitchell, Viren D'Sa, Christine Hockett, Anne L Dunlop, Shohreh F Farzen, Sunni L Mumford, Akram N Alshawabkeh, Hudson P Santos, Xueying Zhang, Zhongzheng Niu, Nan Ji, Carrie Breton, Donghai Liang, Catherine J Karr, Echo Cohort Consortium

Children’s Nutrition Research Center Staff Publications

Background: There is growing interest in understanding the link between early life exposures to ambient air pollution and childhood blood pressure; however, existing findings, largely from single site/cohort studies, are inconclusive.

Methods: We examined the association between exposures to fine particulate matter (PM2.5) and nitrogen dioxide (NO2) and blood pressure measured at age 5-12 years in 4863 U.S. children from 20 pregnancy cohorts of the NIH ECHO cohort. Point-based residential exposures were derived from spatiotemporal models with a biweekly resolution and averaged over each trimester, the whole pregnancy, and child age 0-2 years. We converted systolic (SBP) and diastolic blood …


The Modern Sisyphus Blows Leaves: Attitudes And Impacts Regarding Leaf Litter Removal On A Suburban Campus, A. C. Nony, M. R. Mcclung, M. L. Reid Mar 2026

The Modern Sisyphus Blows Leaves: Attitudes And Impacts Regarding Leaf Litter Removal On A Suburban Campus, A. C. Nony, M. R. Mcclung, M. L. Reid

Journal of the Arkansas Academy of Science

Leaf litter habitat disruption in suburban spaces stems from the prevalence of “lawn culture,” that is, the accepted societal norm that land immediately surrounding humans or meant for human recreational use should be clean, tidy, controlled, and aesthetically pleasing, above other considerations. When leaf litter on residential and recreational lawns is cleared, it removes vital habitat for organisms of several taxa, especially species that rely on litter as a moisture and temperature-controlled substrate for overwintering. We administered an opinion survey to students, staff, and faculty at Hendrix College, a highly residential and suburban campus in Conway, Arkansas, to assess views …


Women’S Roles In Philippine Agriculture In The Context Of Climate Change: A Meta-Synthesis Using The Gender Analysis Framework, Gemnmalyn M. Trespalacio, Nico Jayson C. Anastacio, Samantha Geraldine G. De Los Santos Mar 2026

Women’S Roles In Philippine Agriculture In The Context Of Climate Change: A Meta-Synthesis Using The Gender Analysis Framework, Gemnmalyn M. Trespalacio, Nico Jayson C. Anastacio, Samantha Geraldine G. De Los Santos

The Philippine Agricultural Scientist

This paper highlights the critical role of women, including their contribution to adapting to the effects of climate change on the Philippine agriculture sector. It provides an overview of women’s roles in agriculture in the context of climate change through the lens of the Gender Analysis Framework (GAF). A total of 1,823 relevant articles were collected from ScienceDirect, adopting the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines. After 2 levels of screening process, 17 articles were synthesized guided by the domains of GAF: (1) access to assets; (2) practices and participation; (3) beliefs and perception; and (4) …


Vertical Price Transmission In The Philippine Rice Supply Chain: Responses To Shocks In The Post-Tariffication Period, Bates Bathan Mar 2026

Vertical Price Transmission In The Philippine Rice Supply Chain: Responses To Shocks In The Post-Tariffication Period, Bates Bathan

The Philippine Agricultural Scientist

In the post-Rice Tariffication Law (RTL) period, several protectionist policies and state interventions have reemerged in the Philippine rice market. Using national-level time series data from January 2018 to April 2025, the study applies autoregressive distributed lag models to assess the impact of policy changes and external shocks on unmilled rice (palay) and rice prices. Results show that National Food Authority (NFA) rice stocks significantly affect palay farmgate prices and special rice retail prices. Vertical price transmission flows from farmgate to wholesale levels for special rice, and from wholesale to retail levels for well-milled and regular-milled rice. Major …


Integrative Effects Of Mycorrhizal Fungi, Azotobacter, And Azospirillum With Different Nitrogen Levels On Morphophysiological Responses And Drought Tolerance Of Maize (Zea Mays L.) ‘Sc706’ Under Varying Water Deficit Conditions, Nozar Shamohammadi, Mahdi Zare, Korosh Ordookhani, Farshid Aref, Shahram Sharafzadeh Mar 2026

Integrative Effects Of Mycorrhizal Fungi, Azotobacter, And Azospirillum With Different Nitrogen Levels On Morphophysiological Responses And Drought Tolerance Of Maize (Zea Mays L.) ‘Sc706’ Under Varying Water Deficit Conditions, Nozar Shamohammadi, Mahdi Zare, Korosh Ordookhani, Farshid Aref, Shahram Sharafzadeh

The Philippine Agricultural Scientist

Under drought stress, soil fertility declines sharply, restricting nutrient availability and reducing plant productivity. This study evaluated the effects of mycorrhiza, Azotobacter, and Azospirillum combined with nitrogen on the morpho-physiological traits of maize (Zea mays L.) hybrid SC706 plants under different water deficit conditions. The experiment was conducted at a research field in Fars Province, Iran, over 2 consecutive years (2017–2018, 2018–2019) and applied a split-split plot design based on a Randomized Complete Block Design (RCBD) with 3 replicates. It assessed the effects of the 3 biological fertilizers in 4 treatment groups (Control [B1], inoculation with mycorrhiza alone …


Characterization Of Syntaxin 18 In Peregrinus Maidis And In Vitro Dsrna Synthesis For Potential Rnai-Mediated Control Of Maize Mosaic Alphanucleorhabdovirus (Mmv) Transmission, Hannah Corinne T. Cantaros, Charlene Niebres, Ruth Alessandra Banasihan, Argel L. Arenas, Karen B. Alviar Mar 2026

Characterization Of Syntaxin 18 In Peregrinus Maidis And In Vitro Dsrna Synthesis For Potential Rnai-Mediated Control Of Maize Mosaic Alphanucleorhabdovirus (Mmv) Transmission, Hannah Corinne T. Cantaros, Charlene Niebres, Ruth Alessandra Banasihan, Argel L. Arenas, Karen B. Alviar

The Philippine Agricultural Scientist

The plant virus known as Maize mosaic alphanucleorhabdovirus (MMV) is a persistent, propagative pathogen transmitted by the corn planthopper Peregrinus maidis Ashmead (Hemiptera: Delphacidae). It is the causal agent for a mosaic disease that can cause significant loss in corn yield. Currently, disease management is focused on controlling its insect vector population. The molecular mechanisms of virus transmission by the insect vector are not yet fully understood. Previously, P. maidis syntaxin 18 (PmSTX18) was identified as a receptor for MMV. PmSTX18 interacts with the viral glycoprotein and potentially facilitates MMV recognition and entry into the vector, enabling virus …


Beta-Casomorphin7 Detection In Milk From Dairy Species And Beta-Casein Protein Characterization In Cattle From Selected Provinces In The Philippines, Angelo M. Tapia, Maria Cynthia R. Oliveros, Queennie Hope D. Umipon, Hazel Marie E. Nicolas, Naoya Ogawa, Yasuyuki Kitaura Mar 2026

Beta-Casomorphin7 Detection In Milk From Dairy Species And Beta-Casein Protein Characterization In Cattle From Selected Provinces In The Philippines, Angelo M. Tapia, Maria Cynthia R. Oliveros, Queennie Hope D. Umipon, Hazel Marie E. Nicolas, Naoya Ogawa, Yasuyuki Kitaura

The Philippine Agricultural Scientist

This study was conducted to detect β-casomorphin7 (BCM7) in dairy animals and to characterize the β-casein (CSN2) genotype among dairy cattle breeds in the Philippines. A total of 59 dairy animals, composed of 35 cattle (12 Holstein Sahiwal [HS16 Jersey × Holstein Friesian [JHF], and 7 Siquijor Native Cattle [SNC]), 15 buffaloes (Bulgarian Murrah and Brazilian Murrah), and 9 goats (Saanen and Anglo-Nubian) were collected with milk samples. Milk protein was extracted and subjected to high-performance liquid chromatography–tandem mass spectrometry (HPLC–MS/MS) analysis after stimulated gastrointestinal digestion. BCM7 was detected in cattle with an average concentration of 0.322 + 0.080, whereas …


Carotenoid Profiles Of Momordica Cochinchinensis (Lour.) Spreng. Aril And Leaves As Potential Dietary Caroteniod Sources [Research Note], Francis A. Aguilar, Antonio C. Laurena, Nerrisa K. Torreta, Vida Faith R. Galvez, Evelyn B. Rodriguez, Lourdes B. Cardenas Mar 2026

Carotenoid Profiles Of Momordica Cochinchinensis (Lour.) Spreng. Aril And Leaves As Potential Dietary Caroteniod Sources [Research Note], Francis A. Aguilar, Antonio C. Laurena, Nerrisa K. Torreta, Vida Faith R. Galvez, Evelyn B. Rodriguez, Lourdes B. Cardenas

The Philippine Agricultural Scientist

Momordica cochinchinensis (Lour.) Spreng. or sweet gourd is a perennial, dioecious vine known to possess remarkable carotenogenic capacity. To explore its potential as a dietary carotenoid source, this study evaluated the carotenoids of aril from ripe fruits and of leaves of an accession from Laoag, Ilocos Norte, Philippines, through open-column chromatography. Data reveal that the optimal fruit ripeness for aril carotenoid quantification, determined by fruit skin redness (CIELAB a* value), was achieved 6 to 7 wk after pollination, at which time the aril was found to contain lycopene at 1,260.64 ± 56.17 μg g−1 fresh weight (FW) and β-carotene …


Carotenoid Profiles Of Momordica Cochinchinensis (Lour.) Spreng. Aril And Leaves As Potential Dietary Caroteniod Sources [Research Note], Francis A. Aguilar, Antonio C. Laurena, Nerrisa K. Torreta, Vida Faith R. Galvez, Evelyn B. Rodriguez, Lourdes B. Cardenas Mar 2026

Carotenoid Profiles Of Momordica Cochinchinensis (Lour.) Spreng. Aril And Leaves As Potential Dietary Caroteniod Sources [Research Note], Francis A. Aguilar, Antonio C. Laurena, Nerrisa K. Torreta, Vida Faith R. Galvez, Evelyn B. Rodriguez, Lourdes B. Cardenas

The Philippine Agricultural Scientist

Momordica cochinchinensis (Lour.) Spreng. or sweet gourd is a perennial, dioecious vine known to possess remarkable carotenogenic capacity. To explore its potential as a dietary carotenoid source, this study evaluated the carotenoids of aril from ripe fruits and of leaves of an accession from Laoag, Ilocos Norte, Philippines, through open-column chromatography. Data reveal that the optimal fruit ripeness for aril carotenoid quantification, determined by fruit skin redness (CIELAB a* value), was achieved 6 to 7 wk after pollination, at which time the aril was found to contain lycopene at 1,260.64 ± 56.17 μg g−1 fresh weight (FW) and β-carotene …


Characterization Of Syntaxin 18 In Peregrinus Maidis And In Vitro Dsrna Synthesis For Potential Rnai-Mediated Control Of Maize Mosaic Alphanucleorhabdovirus (Mmv) Transmission, Hannah Corinne T. Cantaros, Charlene Niebres, Ruth Alessandra Banasihan, Argel L. Arenas, Karen B. Alviar Mar 2026

Characterization Of Syntaxin 18 In Peregrinus Maidis And In Vitro Dsrna Synthesis For Potential Rnai-Mediated Control Of Maize Mosaic Alphanucleorhabdovirus (Mmv) Transmission, Hannah Corinne T. Cantaros, Charlene Niebres, Ruth Alessandra Banasihan, Argel L. Arenas, Karen B. Alviar

The Philippine Agricultural Scientist

The plant virus known as Maize mosaic alphanucleorhabdovirus (MMV) is a persistent, propagative pathogen transmitted by the corn planthopper Peregrinus maidis Ashmead (Hemiptera: Delphacidae). It is the causal agent for a mosaic disease that can cause significant loss in corn yield. Currently, disease management is focused on controlling its insect vector population. The molecular mechanisms of virus transmission by the insect vector are not yet fully understood. Previously, P. maidis syntaxin 18 (PmSTX18) was identified as a receptor for MMV. PmSTX18 interacts with the viral glycoprotein and potentially facilitates MMV recognition and entry into the vector, enabling virus …


Integrative Effects Of Mycorrhizal Fungi, Azotobacter, And Azospirillum With Different Nitrogen Levels On Morphophysiological Responses And Drought Tolerance Of Maize (Zea Mays L.) ‘Sc706’ Under Varying Water Deficit Conditions, Nozar Shamohammadi, Mahdi Zare, Korosh Ordookhani, Farshid Aref, Shahram Sharafzadeh Mar 2026

Integrative Effects Of Mycorrhizal Fungi, Azotobacter, And Azospirillum With Different Nitrogen Levels On Morphophysiological Responses And Drought Tolerance Of Maize (Zea Mays L.) ‘Sc706’ Under Varying Water Deficit Conditions, Nozar Shamohammadi, Mahdi Zare, Korosh Ordookhani, Farshid Aref, Shahram Sharafzadeh

The Philippine Agricultural Scientist

Under drought stress, soil fertility declines sharply, restricting nutrient availability and reducing plant productivity. This study evaluated the effects of mycorrhiza, Azotobacter, and Azospirillum combined with nitrogen on the morpho-physiological traits of maize (Zea mays L.) hybrid SC706 plants under different water deficit conditions. The experiment was conducted at a research field in Fars Province, Iran, over 2 consecutive years (2017–2018, 2018–2019) and applied a split-split plot design based on a Randomized Complete Block Design (RCBD) with 3 replicates. It assessed the effects of the 3 biological fertilizers in 4 treatment groups (Control [B1], inoculation with mycorrhiza alone …


Farmers’ Perspectives Toward Organizing A Cotton Producers’ Union In Şanlıurfa, Türkiye, Ismail Efe, Mehmet Cançelik, Mehmet Reşit Sevinç Mar 2026

Farmers’ Perspectives Toward Organizing A Cotton Producers’ Union In Şanlıurfa, Türkiye, Ismail Efe, Mehmet Cançelik, Mehmet Reşit Sevinç

The Philippine Agricultural Scientist

This study examines the attitudes of cotton producers in Şanlıurfa toward establishing a producers’ union to address structural challenges in Türkiye’s leading cotton production region. Şanlıurfa contributes approximately 40% of Türkiye’s cotton output, yet lacks organizational frameworks for its nearly 20,000 producers who face significant risks including price volatility, high input costs, and limited market access. The research utilized primary data collected through face-to-face surveys with 165 cotton producers selected via convenience sampling. Data analysis employed descriptive statistics, exploratory factor analysis using Principal Component Analysis (PCA), independent samples t-tests, and one-way ANOVA. The findings revealed a significant paradox: while …


Dna Barcoding And Metabarcoding Reveal Labeling Accuracy And Species Substitution In Squid And Surimi From Los Angeles Markets, Demian A. Willette, Margarita L. Joaquin Mar 2026

Dna Barcoding And Metabarcoding Reveal Labeling Accuracy And Species Substitution In Squid And Surimi From Los Angeles Markets, Demian A. Willette, Margarita L. Joaquin

Biology Faculty Works

Accurate species identification of seafood remains a persistent challenge in local and global marketplaces. This is particularly true for processed products that obscure diagnostic features. Here, we conduct a dual-molecular investigation into frozen squid and imitation crab products sold at American, Asian, and Hispanic grocery stores in Los Angeles, California, to assess label integrity under current U.S. Food & Drug Administration (FDA) guidance. Forty-eight squid samples from 13 retailers underwent DNA barcoding and yielded high percentage matches to 10 species across six genera. Despite broad labeling as ‘squid’, all samples matched FDA Acceptable Market Names with a 0 % mislabeling …


Situation Mouse All Floxed Up: Exploring Phenotypic Abnormalities In Bdnf Floxed Mice, Marissa A. Burkman Mar 2026

Situation Mouse All Floxed Up: Exploring Phenotypic Abnormalities In Bdnf Floxed Mice, Marissa A. Burkman

All NMU Master's Theses

Animal research is a contentious topic in both the scientific and general communities.  It is essential that our animal models accurately and predictably depict intended phenotypes, necessitating careful colony monitoring and maintenance.  Volunteer animal staff in the Ottem Laboratory became concerned when mice with LoxP sites flanking the BDNF gene depicted anxiety-like behaviors such as aggression, difficulty handling, and increased agitation.  Though many studies have noted behavioral and phenotypic abnormalities related to large gene inserts, few have noted abnormalities with small gene inserts such as the 34 bp LoxP site.  Brandt (2018) performed a three-stage behavioral protocol on these mice …


Demography And Dispersal Influence The Relationship Between Habitat Suitability And Population Density, Cleber Ten Caten, Tad Dallas Mar 2026

Demography And Dispersal Influence The Relationship Between Habitat Suitability And Population Density, Cleber Ten Caten, Tad Dallas

Faculty Publications

A central goal of ecology is to understand spatial patterns of species densities. Habitat suitability estimates from species distribution models (SDMs) could be used to represent species density and overcome the scarcity of density data. However, there is mixed evidence that habitat suitability is a reliable descriptor of density, and it is suggested that local dynamics affect the relationship between habitat suitability and density. We simulated population dynamics for 200 virtual species considering different combinations of factors (demographic stochasticity, dispersal, and intraspecific competition) that affect population sizes and SDMs were trained using different sets of environmental predictors to evaluate when …


A Critical Review Of Statistical, Signal Processing And Machine Learning Methods For Continuous And High-Frequency Water Quality Data Improvement, A.T. Badrudeen, D. Sahoo, Calvin Sawyer, Jeremy Pike, R.D. Haramel Mar 2026

A Critical Review Of Statistical, Signal Processing And Machine Learning Methods For Continuous And High-Frequency Water Quality Data Improvement, A.T. Badrudeen, D. Sahoo, Calvin Sawyer, Jeremy Pike, R.D. Haramel

Publications

In the digital water world, high-frequency water quality monitoring from sensors is crucial for capturing rapid changes, especially during storm events or discharge fluctuations, in which important signals can occur at sub-hourly intervals. These signals are represented in a time series and can sometimes be irregular, noisy, and prone to missing values or errors due to buried conditions, sediment interference, and signal loss. The fine resolution of reporting also increases the risk of sensor errors and data loss, necessitating effective correction methods to ensure the accuracy and usability of the data. This literature review investigates the current state of time …


Development Of Antimicrobial Food Packaging Films Based On Electrospun Polycaprolactone Nanofibers Encapsulating Thyme Oil Nanoemulsions, Mahfuzur Rahman, Abdus Sobhan, Hari Kotturi, Sarder Sadique, Morshed Khandaker Mar 2026

Development Of Antimicrobial Food Packaging Films Based On Electrospun Polycaprolactone Nanofibers Encapsulating Thyme Oil Nanoemulsions, Mahfuzur Rahman, Abdus Sobhan, Hari Kotturi, Sarder Sadique, Morshed Khandaker

Publications

This study developed and characterized a novel antimicrobial food packaging film fabricated from electrospun polycaprolactone (PCL) nanofibers incorporated with thyme oil nanoemulsions (TONEs). The concentration of TONEs in the film ranged from 2.5 to 15 % (v/v). The physicochemical properties, including pH, viscosity, and water absorption of the film were evaluated, with results showing favorable values (TONEs pH ≈ 5.46, viscosity ≈ 0.26 cP, contact angle ≈ 109-1270 and water absorption ≈ 21.47 %). The microstructure of the film was observed using scanning electron microscopy (SEM), which revealed the uniform dispersion of TONEs within the PCL nanofibrous matrix, with …


Species Sorting And Spatial Effects In Hyporheic Invertebrate Functional Groups, Benjamin T. Hutchins, Zoey B. Chanin, Kathryn E. Perez, Peter H. Diaz, Benjamin F. Schwartz Mar 2026

Species Sorting And Spatial Effects In Hyporheic Invertebrate Functional Groups, Benjamin T. Hutchins, Zoey B. Chanin, Kathryn E. Perez, Peter H. Diaz, Benjamin F. Schwartz

School of Integrative Biological & Chemical Sciences Faculty Publications

Invertebrate communities in the hyporheic zone are structured by metacommunity processes including environmental filtering and spatial effects (e.g., dispersal). We investigated how these processes differentially influence two functional groups: groundwater-obligate invertebrates (stygobionts) and benthic insects. We predicted that environmental filtering would dominate for insects, while spatial effects would prevail for stygobionts. We collected 76 samples from 28 hyporheic sites along 109 km of the Rio Grande, Texas, USA, enumerating 54,508 individuals across 80 taxa. Concordance analysis and RDA revealed two communities: one dominated by insects, and another by crustaceans and soft-bodied organisms, including all stygobionts. In linear models, insect richness …


The Application, Construction, And Validation Of Hidden Markov Model Profiles For Carbonic Anhydrase Enzymes, Samuel F. Kaplan Mar 2026

The Application, Construction, And Validation Of Hidden Markov Model Profiles For Carbonic Anhydrase Enzymes, Samuel F. Kaplan

Master's Theses

Carbonic anhydrases (CAs) catalyze the reversible hydration of CO2 and have evolved independently at least eight times, resulting in structurally distinct enzyme families (α, β, γ, δ, ζ, η, θ, ι). Traditional sequence alignment methods struggle to classify these convergently evolved proteins because their sequential similarity does not reliably indicate functional or evolutionary relationships. Many CA sequences in public databases are annotated generically without family assignments, and prior computational approaches have focused predominantly on the three well characterized families (α, β, γ), leaving the five recently discovered classes without robust classification tools. Family level assignment is often a prerequisite for …


Exploring Non-Conventional Substrates: The Role Of Hibiscus And Whey In Kombucha Fermentation, Benjamin J. Lee Mar 2026

Exploring Non-Conventional Substrates: The Role Of Hibiscus And Whey In Kombucha Fermentation, Benjamin J. Lee

Master's Theses

This study evaluated the impact of hibiscus and whey as alternative fermentation substrates on the physicochemical, phytochemical, and microbial properties of kombucha. A 2 × 2 full factorial design was used to compare four treatments: black tea + water (BW), black tea + whey (BH), hibiscus + water (HW), and hibiscus + whey (HH). The fermentation solvents (water or whey) were heated to 88 °C, infused with 0.6% (w/v) black tea or hibiscus for 10 minutes, sweetened with 10% (w/v) sucrose, cooled to 22 °C, and inoculated with 20% (v/v) kombucha starter culture. Fermentations were carried out at 22 °C …


Measurement And Control Of The Oxidation-Reduction Potential And Its Chemical And Sensory Consequences In Wines, William Jordan Wright Mar 2026

Measurement And Control Of The Oxidation-Reduction Potential And Its Chemical And Sensory Consequences In Wines, William Jordan Wright

Master's Theses

The oxidation-reduction potential (ORP) is a measurement thought to reflect the overall ability of a solution to oxidize or reduce substances within that solution. In wine, there is no absolute agreement as to which substances control or dominate the ORP; however, oxygen, ethanol, iron-tartrate and copper-tartrate complexes, and glutathione are suspected to play key roles, while sulfur dioxide and phenolics may act as buffers. Anecdotally, some varieties of Vitis vinifera are prone to oxidation while others are prone to reduction, though the chemical basis of this remains unclear. The following works aim to further elucidate the influence of specific chemical …