Life Sciences Commons^™

The Seasonality And Community Composition Of Mosquitoes At Turnbull National Wildlife Refuge, Jonathan Becerra

EWU Masters Thesis Collection

Characterizing mosquito species composition and seasonal dynamics is fundamental to understanding how mosquito communities change across time and space. This study examined the structure, temporal patterns, and spatial variation of the mosquito community at Turnbull National Wildlife Refuge (TNWR) using three years of CDC light-trap data (2017–2019). We applied multiple complementary analytical approaches—including presence/absence and CPUE models, annual and species-specific generalized additive models (GAMs), peak-timing ANOVA, and multivariate analyses (NMDS, PERMANOVA, and indicator species analysis)—to quantify species-level seasonality, phenological staggering, and community-level patterns across years and between two sampling locations (Gate and Headquarters). Across all model families, species identity and …

Assessing Relatedness Of Copperbelly Water Snakes In A Captive Breeding Program, Dehlia Deriemaker

Senior Honors Theses and Projects

Breeding threatened and endangered animals in captivity and their subsequent release can help supplement wild populations. Within captive breeding programs, maintaining genetic diversity is an important consideration for ensuring the survival of a species as a whole. Preserving genetic diversity increases population persistence, as it may offer a better chance for a species to adapt to a changing environment. The Copperbelly Water Snake (Nerodia erythrogaster neglecta, CWS) is listed as threatened by the U.S. Fish and Wildlife Service. In an effort to aid CWS recovery efforts, the Toledo Zoo manages a captive breeding program initially consisting of nine adult and …

Use Of Coculture And Carbon Source Manipulation To Stimulate Antibiotic Production In Soil-Dwelling Microbes, April R. Dembinski

Senior Honors Theses and Projects

This study aimed to discover new antibiotics produced by soil microbes. Previous studies have shown that manipulation of microbial growth conditions through variable carbon sources and growth in coculture could induce the production of novel antibiotics by soil microbes. This study expanded on these observations by testing the levels of antibiotic production when a producing strain was grown in twenty different carbon sources and cocultured with more than one hundred different coculture partners. Organic extracts from liquid cultures were tested against a panel of four safe relatives to ESKAPE pathogens and one yeast to detect antimicrobial activity. Certain combinations of …

Allele-Specific Pcr (As-Pcr) Assays For Genetic Variants Associated With Color Morphs In Ball Pythons (Python Regius), Uyen Dao

Senior Honors Theses and Projects

While the genetic basis of color morphs in ball pythons (Python regius) has become increasingly studied, rapid and accessible tools for genotyping these known mutations are still limited. Here, we developed allele-specific PCR (AS-PCR) assays for detecting genetic mutations associated with ten diUerent P. regius color morphs, providing a rapid and coste Uective genotyping tool. We first tested each color morph with diUerent combinations of AS-PCR primers to determine the optimal ones. Then, we performed AS-PCR again with a larger sample set after identifying optimal primers and amplification conditions specific to each morph-associated genetic variant. These AS-PCR assays distinguished wild-type …

Supplemental Feeding Alters Foraging Behaviors Of Tarantulas In Their Natural Habitat (Aphonopelma Hentzi), Annalyse Leach Brogan

Senior Honors Theses and Projects

Foraging success is a crucial factor in survival and reproductive success for many animals. One mechanism that can improve an organism’s foraging success is foraging plasticity, or the organism’s ability to alter their behavior in response to environmental changes. This study aims to evaluate if the Colorado Brown Tarantula, Aphonopelma hentzi, a long-lived, sit-andwait predator will use foraging plasticity in response to increased prey encounters. I predicted that tarantulas with more prey encounters will have a higher body condition index, shorter foraging duration, and shorter distances traveled from the burrows. I conducted a field study on A. hentzi in their …

Colorblind Racial Attitudes Mediates The Association Between The Internalization Of Model Minority Myth Attitudes And Tolerance, Talal Ali

Senior Honors Theses and Projects

The model minority myth is the belief that Asian Americans are generally more intelligent and more hardworking than other minority groups. Many studies have demonstrated the relationship between belief in the model minority myth and anti-Black sentiment in White Americans. However, there is little literature on the relationship between belief in the model minority myth and anti-Black sentiment in Asian Americans. With this in mind, we plan to determine whether the internalization of the model minority myth in Asian Americans has a relationship with anti- Black sentiment. This relationship is being measured by the IM-4 Scale (which measures the internalization …

Tailwater Trout Population Dynamics, Connor Dylan Cunningham

Graduate Theses/Dissertations

Dams have been constructed throughout the world and provide several resources for humans (e.g., flood control, hydropower). These structures heavily alter the upstream and downstream environment. One consequence of these alterations is the creation of “tailwaters”, which can create cold-water habitat via hypolimnetic releases. In the southeast United States these tailwater environments are often managed for the recreational use of nonnative salmonids. The unnatural flow regimes of tailwaters affect the biotic and abiotic conditions and ultimately the dynamic rate functions (i.e., recruitment, growth, mortality) of the fish inhabiting them. As such, the goal of this research is to provide fisheries …

Identification Of A Stable Qtl For Juice Color In A Vitis Interspecific Hybrid ‘Chambourcin’- Based Population, Qiuni Yang

Graduate Theses/Dissertations

Berry juice color is one of the key factors influencing grape and wine quality, consumer preference, and marketability. While most previous studies on berry color have focused on the skin, research on juice color remains limited. This study investigated the genetic basis of berry juice color in a hybrid population derived from the Vitis interspecific hybrid ‘Chambourcin’ and V. vinifera ‘Cabernet Sauvignon’. A new nine-category visual scoring system was developed to assess juice color based on OIV 225. To achieve comprehensive precision and quantitative analysis, CIELAB parameters (L*, a*, b*), Hue, and Chroma were extracted from image-based measurements. Using berries …

Help Or Hindrance? Humans As A Range Expanding And Reducing Force For Himalayan Black Bears In Nepal, Suman Shree Neupane

Graduate Theses/Dissertations

I explore the relationship between Himalayan black bears (HBBs) and humans by constructing niche models for HBBs considering both natural and human influences. This approach allowed me to assess the net impact of human activities on HBBs, which face challenges like habitat fragmentation, but also reap some benefits (like increased food availability). I examined HBB niche impacts from humans by quantifying and comparing the extent of HBB niche space when including versus excluding anthropogenic influences. Specifically, I estimated the natural HBB niche space by assuming no human alterations of the landscape and compared this natural range to the observed range …

Territorial Behavior Of A Terrestrial Salamander: Effect Of Physical Stress, Residency Status, And Sex, Abigail C. Nagl

Graduate Theses/Dissertations

Environmentally induced stressors can include threats from predators and competitors. Individuals in territorial species, including the subject of this study, Southern Red-backed Salamanders, Plethodon serratus, face ongoing competitive threats, and loss of contests may be more consequential to territory owners (losing a territory) than to intruders (continuing to be without a territory). Therefore, when the threat of increased predation risk is added, residents may respond differently than intruders. Here, I tested the impact of physical stress, residency status and sex on the territorial behavior of Southern Red-backed salamanders. Territorial behavior was assessed through staged contests with same-sized and same-sexed individuals, …

A Study Of Collegiate Equine Team Funding, Expenditures, And Recruitment Strategies, Sydni Marie Nilles

Graduate Theses/Dissertations

Collegiate equine teams (including horse judging, equestrian, ranch horse teams) have been recognized for their contributions to students' personal and professional development for post- graduation success. Teams have been used to provide opportunities, a sense of belonging and allow for experiences students may not have elsewhere. However, there is a notable gap in knowledge as to where funding comes from and how much teams may be able to budget for expenditures. Recruitment tactical knowledge provides other teams with knowledge of potential areas they may be lacking or unaware of. I used an online survey to understand current ranges of support …

Effects Of Liraglutide On The Gut Bacterial Community, Jami Anne Bull

Graduate Theses/Dissertations

Overweight and obesity are major health concerns associated with metabolic disorders and gut dysbiosis. Treatment options such as GLP-1 receptor agonists, like liraglutide, promote weight loss and improve insulin sensitivity; however, their impact on the gut bacterial community remains unclear. This study investigated the effects of liraglutide on the gut bacterial community of diet-induced obese (DIO) mice using Illumina DNA sequencing of the bacterial 16S rRNA gene. My study used twelve-week-old male C57BL/6J DIO mice. They were placed on a high-fat diet and treated with liraglutide (0.2 mg/kg) via daily subcutaneous injection for 14 Days. High-fat and low-fat diets control …

Responses Of Native And Invasive Aquatic Vegetation To Changes In Water Depth In An Ozark Spring-Fed Pond, Daphne Miles

Graduate Theses/Dissertations

Spring-fed aquatic ecosystems in the Ozark Highlands are characterized by stable water depths, clear water, and diverse aquatic vegetation (filamentous algae, submerged, floating, and emergent plants). Sudden changes in water depth can impact aquatic vegetation dynamics but the impacts of prolonged changes are poorly understood. I investigated seasonal and annual changes to aquatic vegetation abundance in a spring impoundment during and after a two-year period of low water depth that was caused by a broken outlet below an artificial dam. Water depth was significantly lower in 2020 and 2021 (low water years), compared to 2022 and 2023 (high water years). …

The Role Of Host Factor Sptbn1 In Hiv-1 Capsid Uncoating In Human Microglial Cells, Callie Marie Fry

Graduate Theses/Dissertations

HIV-1 is the virus that causes acquired immunodeficiency syndrome (AIDS), and currently, there is no cure once an individual is infected. The development of new drugs targeting HIV-1 replication steps is essential for keeping viral loads low or undetectable to prevent further transmission. An attractive replication step for new drug targets is viral capsid uncoating, where the virus loses the protein structure encapsulating the genome. The exact mechanism of capsid uncoating is unknown; however, several host-factors may be involved including protein SPTBN1. Recent studies have shown a significant decrease in viral infectivity when SPTBN1 is knocked down, yet its role …

Modeling The Impact Of Climate Change On Plant Hardiness Zones Across The Contiguous United States Using Empirical Bayesian Kriging Regression Prediction, Daniel Donkor

Graduate Theses/Dissertations

Mapping plant hardiness zones is crucial to understanding and predicting the spatial distribution of plants in response to climatic conditions. The United States Department of Agriculture (USDA) developed the plant hardiness zones based on the average of annual extreme minimum temperatures using the Parameter elevation Regression on Independent Slope Model (PRISM). While the USDA’s 2012 and 2023 Plant Hardiness Zone maps remain standard references, they offer limited geostatistical transparency that causes more complications in replicating. This study applies Empirical Bayesian Kriging Regression Prediction (EBKRP) method to generate Plant Hardiness Zone maps, analyze spatial and temporal shifts in the plant hardiness …

The Influence Of Flower-Microbe Interactions On Bumble Bee Behavior And Gut Microbiome Composition, Success Chiamaka Ekemezie

Graduate Theses/Dissertations

This thesis examines how microbial interactions in floral nectar and environmental variation influence bumble bee (Bombus spp.) foraging behavior and gut microbiome composition. Pollen germination experiments and behavioral assays in the lab tested whether Metschnikowia reukaufii (yeast) and Acinetobacter nectaris (bacteria) induce pollen germination and bursting in nectar and affect bee behavior subsequently. Both microbes reduced intact pollen, but bees did not alter flower preference. Furthermore, the study also assessed how floral and bee community composition shaped gut microbiome composition across six Missouri prairies. Using amplicon-sequenced fungal ITS and bacterial 16S rRNA genes, I found that fungal microbiome composition varied …

Generational Exposures To Cerium Oxide Nanoparticles And Perfluorooctanesulfonic Acid Affect The Performance Of Daughter Plants, Preston Clubb

Graduate Theses/Dissertations

The effects of parental stress on the performance of next generation exposed to another contaminant were investigated. Wheat was exposed to cerium oxide nanoparticles (CeO2-NPs) in first and second generations and exposed to perfluorooctanesulfonic acid (PFOS) in the third generation. Phenotypic or metabolic responses were assessed at 21-day (short-term exposure) or 90-day (long-term exposure) exposure periods. Biomass production, chlorophyll content, enzyme activity, and membrane damage were measured at short-term exposure, while elemental and PFOS concentrations, and grain metabolites were analyzed in long-term exposure. Results showed that continued exposures to CeO2-NPs and PFOS enhanced chlorophyll content but reduced concentrations of important …

Giant Cane (Arundinaria Gigantea) And The Swainson’S Warbler (Limnothlypis Swainsonii): Implementing Innovative Monitoring Techniques For Species Of Conservation Concern, Gabriela Carroll

Graduate Theses/Dissertations

In the U.S., following colonization and agricultural expansion, giant cane (Arundinaria gigantea) has been reduced to approximately 2% of its original extent, potentially causing shifts in the abundance and distribution of over 70 associated animal species. Among those species is the Swainson’s Warbler (Limnothlypis swainsonii), which has been known to occupy canebrakes during the breeding season. Though there is little known about the historical range of the Swainson’s Warbler and its current population status, some have hypothesized that its population may have declined due to the reduction of its suitable breeding habitat. As this species is …

Investigating Social Attenuation Of The Stress Response In Juvenile Northern Cottonmouths (Agkistrodon Piscivorus), Alyssa Owens

Graduate Theses/Dissertations

When social organisms encounter a stress-inducing event, the presence of a conspecific can dampen the physiological and/or behavioral response elicited by the stressor. This concept, termed ‘social buffering’, has been well documented in mammals, but there are few studies investigating this phenomenon in organisms traditionally perceived as asocial, including reptiles. However, the paradigm is shifting, and social behavior is now more widely recognized in reptiles, including snakes. In this study I tested whether juvenile Northern Cottonmouths (Agkistrodon piscivorous) experience social buffering by measuring changes in heart rate in snakes following an acute stressor with and without the presence …

A Mystery Of Microecology: Revealing The Ecological Relationship Between Allorhizobium Vitis And Missouri Native Grape Species, Hunter White

Graduate Theses/Dissertations

Crown gall disease can be very detrimental to grape and wine producers around the world by reducing vine vigor and yield. It is caused by the bacteria Allorhizobium vitis (A. Vitis) carrying a tumor inducing (Ti) plasmid. The A. vitis bacteria have been found in soil and cane tissues in vineyards around the world, and infect all cultivated grapes. However, there have been no reports of crown gall on native wild grapevines, and very little is known about the ecology of A. vitis in native ecosystems. I have sampled cambium tissues from three native wild grape species of …

Effects Of Climate Change On Fungal Diversity And Function In Streams, Syeda Tasfia Imam

Masters Theses

"This study investigated the impact of climate change, particularly drought, on leaf decomposition and associated fungal and macroinvertebrate communities in freshwater ecosystems. With climate change, streams may experience altered hydrology, leading to shifts in community composition and biogeochemical processes. Fungi decompose organic matter, facilitate nutrient cycling, and support food webs. However, drought can disrupt these processes by reducing water availability, causing declines in fungal diversity and activity. I examined leaf breakdown and associated biota in 13 stream sites across varying hydrologic conditions, from perennial to ephemeral flow patterns. Flow duration varied during the 8-week study. Leaf breakdown was significantly related …

Environmental Pollutants: A Risk For Premature Aging And Transgenerational Toxicity, Alex Kathleen Daniels

Masters Theses

"This thesis aims to identify interactions between C. elegans’ reproductive system and global pollutants such as microplastics, HgCl₂, nicotine, and pesticides. Human exposure to these pollutants and their effect on reproduction can be analyzed using the C. elegans as a model organism. Systematic analysis of matricidal hatching, progeny production, germline apoptosis, and lifespan assays determined effects on reproduction and reproductive aging. Through my experiments, it was determined that no significant effects were produced from the selected polystyrene, polyethylene, vape juice, nicotine hemi sulfate salt, imidacloprid, or glyphosate regarding matricidal hatching or progeny production. I confirmed that HgCl₂ induced significant effects …

Isolation And Characterization Of A Halophilic, Extremely Acidophilic, Iron-Oxidizing Bacterium, Connor Crites

Masters Theses

This thesis describes the isolation and characterization of a halophilic iron- oxidizing bacterium from sediments obtained from Lake Magic; an extremely acidic, saline lake located in Western Australia. The purpose for the isolation of novel, halotolerant/halophilic iron-oxidizing bacteria is to aid in metal-mining bioleaching operations. Currently used iron- and sulfur-oxidizing bacteria are extremely sensitive to chloride, which restricts their use in these industries.

A singular bacterial morphology was isolated from Lake Magic sediments that was roundly-rod shaped, 1-2 um in length, and stained Gram-negative. This organism was able to grow in a modified medium (DSM14174) using ferrous sulfate as an …

Testing The Life-History Dependence Of Dietary Restriction Effects On Oxidative Molecular Damage In Hornworms, Fahime Taheri

Masters Theses

DR and ambient temperature are two environmental factors widely implicated in shaping organismal maintenance and longevity through effects on metabolic rate and oxidative damage. This study tests whether DR and reduced body temperature independently or interactively reduce oxidative protein damage in the gut of tobacco hornworm larvae, a short-lived ectotherm whose life history may constrain typical DR responses. Larvae hatched from eggs were allocated to two feeding regimes (AL and DR) and to 20 °C and 30 °C. At a defined endpoint, guts dissected and homogenized, and analyzed for protein carbonyl content and total protein. Protein damage was expressed as …

The Rad6-Like Ubiquitin Conjugase Gene Osubc7 Has A Positive Role In The Early Cold Stress Tolerance Response Of Rice, Huy Phan, Michael Schläppi

Biological Sciences Faculty Research and Publications

Background/Objectives: Cold stress poses a significant threat to Asian rice cultivation, disrupting important physiological processes crucial for seedling establishment and overall plant growth. It is, thus, crucial to elucidate genetic pathways involved in cold stress tolerance response mechanisms. Methods: We mapped OsUBC7, a Radiation-sensitive 6 (RAD6)-type homolog of rice, to a low-temperature seedling survivability (LTSS) QTL and used genomics, molecular genetics, and physiological assays to assess its role in plant resilience against low-temperature stress. Results: OsUBC7 is cold responsive and has higher expression levels in cold-tolerant japonica than cold-sensitive indica. Overexpression of OsUBC7 enhances LTSS of indica and freezing tolerance …

Anoxia And Re-Oxygenation At Colder Temperatures In Goldfish (Carassius Auratus): Effects On Oxidative Stress And Metabolites, Matthew E. Trzcinski

Theses and Dissertations (Comprehensive)

Under the ice of ponds and lakes, goldfish (Carassius auratus) can survive weeks of anoxia at low temperatures by conserving ATP and by reducing their metabolic rate and relying on liver glycogen stores to meet their ATP demands using glycolysis. The following period of re-oxygenation is also known to be damaging in most vertebrates because it can lead to the generation of reactive oxygen species (ROS) that can cause oxidative damage to lipids, proteins and nucleic acids. Anoxia tolerant vertebrates such as the goldfish and crucian carp (Carassius carassius) accumulate reduced molecules with anoxia, overwhelming the …

Reversible Degradation Of Peptidoglycan By Lytic Transglycosylases, Aaron Devereaux

Theses and Dissertations (Comprehensive)

Antimicrobial resistance continues to be a burden on the global healthcare system with an estimated cost of billions of dollars and millions of deaths each year. Recently, there has been little to no development on new antibiotics to treat bacterial infection, and any that are developed become resisted to within a few years. Both Gram-positive and Gram-negative bacteria contain a mesh-like layer called peptidoglycan (PG) that surrounds their cells providing strength, cell shape, and protection from their environments. This layer is a polymer of N-acetylmuramic acid (MurNAc) and N-acetylglucosamine (GlcNAc) connected via a b-1,4-glycosidic bond, with each strand being cross-linked …

Exploring Mating Patterns: The Interplay Of Genes, Environment, And Their Evolutionary Outcomes, Sanduni Talagala

Theses and Dissertations (Comprehensive)

There is great variation in the reproductive tactics exhibited both between and within different species, which is reflected in how individuals engage in mate assessment, mate choice and offspring production. It is therefore important to understand general mating patterns of populations, the factors that influence these mating patterns, and the consequences they carry, in order to get a more holistic understanding of mating systems. This doctoral research represents a multi-pronged investigation of the factors shaping mating patterns and their consequences, how environmental factors influence mating patterns, and how both genotypes and the environment interact to influence mate choice decisions and …

Npr1 As A Temperature-Sensitive Regulator Of Pipecolic Acid-Mediated Plant Systemic Immunity, Spencer Tout

Theses and Dissertations (Comprehensive)

Healthy plant development requires balancing both abiotic (e.g. climate) and biotic (e.g. pathogen) challenges, which intercept important signaling pathways in plants. For example, climate change-associated elevated temperature can negatively modulate various aspects of plant immunity, including the production of central immune signals salicylic acid (SA) and N-hydroxypipecolic acid (NHP). Since SA and NHP signaling both require the master immune co-activator protein NON-EXPRESSOR OF PATHOGENESIS-RELATED GENES 1 (NPR1), it is important to investigate NPR1 as a potentially temperature-regulated molecular hub. Although the NPR1 gene is not transcriptionally downregulated at elevated temperatures (28° C vs. 23° C), little is known about …

Influence Of Temperature On Tfm Tolerance In Lake Sturgeon, Emily Bouffard

Theses and Dissertations (Comprehensive)

The lampricide, 3-trifluoromethyl-4-nitrophenol (TFM), has been used to successfully control invasive sea lamprey (Petromyzon marinus) in the Laurentian Great Lakes for over 50 years. TFM’s effectiveness is due to the relatively low capacity of sea lamprey to detoxify TFM. Water temperature has been shown to increase TFM tolerance in larval sea lamprey. However, the effects of temperature on TFM sensitivity in non-target species such as the endangered lake sturgeon (Acipenser fulvescens) are poorly understood, particularly during their early life stages. To determine how temperature affected TFM sensitivity, age 1-year-plus (1+) lake sturgeon acclimated to 8, 16, …