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Instructions For Authors, Discovery Editors

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Developing A Parameterization Approach For Soil Erodibility For The Rangeland Hydrology And Erosion Model (Rhem), Osama Z. Al-Hamdan, Frederick B. Pierson, Mark A. Nearing, Christopher Jason Williams, Mariano Hernandez, Jan Boll, Sayjro K. Nouwakpo, Mark A. Weltz, Kenneth Spaeth

Articles

Soil erodibility is a key factor for estimating soil erosion using physically based models. In this study, a new parameterization approach for estimating erodibility was developed for the Rangeland Hydrology and Erosion Model (RHEM). The approach uses empirical equations that were developed by applying piecewise regression analysis to predict the differences of erodibility before and after disturbance (i.e., wildfire, prescribed fire, and tree encroachment) and across a wide range of soil textures as a function of vegetation cover and surface slope angle. The approach combines rain splash, sheet flow, and concentrated flow erodibilities into a single parameter for modeling erodibility …

Determination Of Novel Metabolites Of Therapeutic Agents Used In The Treatment Of Castration-Resistant Prostate Cancer, Mohammad Alyamani

ETD Archive

Despite an array of improved treatment options over the past decade, prostate cancer remains the second leading cause of cancer mortality for men in the United States. Abiraterone and galeterone are oral steroidal compounds that are used to treat metastatic castration-resistant prostate cancer (CRPC). Abiraterone blocks 17a-hydroxylase/17,20-lyase (CYP17A1), an enzyme required for androgen synthesis. Galeteron inhibits CYP17A1, blocks the androgen receptor (AR), and decreases AR protein levels. Both drugs share the same structure with endogenous androgens such as dehydroepiandrosterone, which are substrates for the enzyme, 3ß-hydroxysteroid dehydrogenase (3ßHSD). Metabolites of 3ßHSD undergo further metabolism to produce the AR ligand, testosterone …

The Effect Of Site Characteristics On The Reproductive Output Of Lesser Celandine (Ranunculus Ficaria), Justin P. Kermack

ETD Archive

Ranunculus ficaria L., an ephemeral perennial invasive plant brought over from Europe, is becoming widespread throughout the Northeastern United States. This herbaceous buttercup is able to create extensive dense mats that limit native species growth. Taking advantage of an early growing season and rapid reproduction rates, this species can create dense monocultures, which threatens native communities and ecosystems. Elimination of native spring ephemerals results in decreased biodiversity. A better understanding of how R. ficaria responds to site characteristics is needed to prioritize management efforts toward high-risk sites.

Ranunculus ficaria abundance and reproductive output (seed, bulbil and tuber production rates) were …

Age And Sex-Specific Effect Of Caloric Restriction On Circadian Clock And Longevity-Associated Gene Expression, Arten Andreyevich Astafev

ETD Archive

The rhythms in the expression of circadian clock genes are affected by calorie restriction (CR), a dietary paradigm known to increase lifespan. In our current study, we show that circadian rhythms are influenced by sex and the effects of CR are different between males and females. In particular, we found a group of clock genes which showed a sex-dependent difference in expression, as well as in response to CR (Rev-Erb α, Ror γ and both Cryptochromes: Cry1 and Cry2 genes). Two clock genes showed no difference in expression but their response to CR showed sexual dimorphism (Ror α and Rev-Erb …

Chlorophyll Concentration (Mg L-1), Xiaodong Zhang, Afshin Shabani

Datasets

Collected at the water surface.

Sharp-Tailed Grouse Nest Survival And Nest Predator Habitat Use In North Dakota’S Bakken Oil Field, Paul C. Burr, Aaron C. Robinson, Randy T. Larsen, Robert A. Newman, Susan N. Ellis-Felege

Biology Faculty Publications

Recent advancements in extraction technologies have resulted in rapid increases of gas and oil development across the United States and specifically in western North Dakota. This expansion of energy development has unknown influences on local wildlife populations and the ecological interactions within and among species. Our objectives for this study were to evaluate nest success and nest predator dynamics of sharp-tailed grouse (Tympanuchus phasianellus) in two study sites that represented areas of high and low energy development intensities in North Dakota. During the summers of 2012 and 2013, we monitored 163 grouse nests using radio telemetry. Of these, …

Development Of Tools For Phosphosite-Specific Kinase Identification And Discovery Of Phosphatase Substrates, Pavithra Maheshani Dedigama Arachchige

Wayne State University Dissertations

Phosphorylation is a ubiquitous post translational modification implicated in many diseases, such as cancer. The phosphorylation status of cellular proteins is regulated by the activity of kinases and phosphatases. The biological significance of many phosphorylation events remain unknown because the methods to determine which kinase or phosphatase is responsible for phosphorylation are limited. Previously, we established kinase-catalyzed labeling where kinases accept γ-modified ATP analogs, such as ATP-arylazide and ATP-biotin, to label phosphoproteins. To study substrates of kinases and phosphatases, here we developed two new methods using kinase-catalyzed labeling. As one application, we developed K-CLASP (Kinase-catalyzed CrossLinking And Streptavdin Purification) to …

Activity Dependent Changes In Functional And Morphological Characteristics Among Presympathetic Neurons Of The Rostral Ventrolateral Medulla, Daniel J. Huereca

Wayne State University Dissertations

A sedentary lifestyle is a major risk factor for the development of cardiovascular disease (CVD), the leading cause of death among Americans. Increasing evidence implicates increased sympathetic nerve activity (SNA) as the link between a sedentary lifestyle and CVD. The research presented in this dissertation examines the region of the brainstem known as the rostral ventrolateral medulla (RVLM) and how its regulation of SNA changes as a result of sedentary conditions. Our group has previously reported that sedentary conditions enhance splanchnic SNA in response to pharmacologically induced decreases in blood pressure or by direct activation of the RVLM via microinjection …

Design, Synthesis And Biological Evaluation Of Histone Deacetylase (Hdac) Inhibitors: Saha (Vorinostat) Analogs And Biaryl Indolyl Benzamide Inhibitors Display Isoform Selectivity, Ahmed Negmeldin

Wayne State University Dissertations

HDAC proteins have emerged as interesting targets for anti-cancer drugs due to their involvement in cancers, as well as several other diseases. Several HDAC inhibitors have been approved by the FDA as anti-cancer drugs, including SAHA (suberoylanilide hydroxamic acid, Vorinostat). Unfortunately, SAHA inhibits most HDAC isoforms, which limit its use as a pharmacological tool and may lead to side effects in the clinic. In this work we were interested in developing isoform selective HDAC inhibitors, which may decrease or eliminate the side effects associated with non-selective inhibitors treatment. In addition, isoform selective HDAC inhibitors can be used as biological tools …

Development Of Chemical Tools To Investigate Protein S-Glutathionylation In Response To Metabolic Alteration, Kusal Theekshana Gayan Samarasinghe

Wayne State University Dissertations

Oxidative stress is a common characteristic of age-related diseases such as vascular diseases, diabetes and cancer. Many diseases are known to be regulated by glutathionylation. Glutathionylation is referred to as the formation of disulfide bond between a protein cysteine and a glutathione. To understand the molecular mechanisms behind the disease initiation and progression, identification of such glutathionylated proteins is important. Even though existing methods have been widely used, several limitations of these methods hinder the identification of such proteins in disease conditions. Therefore, we developed a versatile chemical method that generates clickable glutathione inside the cells. In this method, we …

Ligand Binding Studies Of A Peptide Targeting Helix 69 Of 23s Rrna In Bacterial Ribosomes, Hyosuk Seo

Wayne State University Dissertations

In the development of finding a peptide targeting H69 of 23S rRNA in bacterial ribosomes, phage display was employed at pH 5.5, a buffer condition previously reported of H69 preferring a closed conformation. After sequencing, several peptides were chosen through sequence alignment, followed by preparation using solid-phase peptide synthesis. The peptides were characterized using MALDI-TOF and purified with HPLC. A truncated peptide TARHIY was selected from FID assay. Through binding studies using ESI-MS, SPR, BLItz, and NMR, the binding properties of the peptide to H69 were determined, such as binding affinity, stoichiometry, and interaction site. The peptide exhibited moderate binding …

The Development Of Chemical Methods To Discover Kinase Substrates And Map Cell Signaling With Gamma-Modified Atp Analog-Dependent Kinase-Catalyzed Phosphorylation, Dissanayaka Mudiyanselage Maheeka Madhubashini Embogama

Wayne State University Dissertations

Kinase-catalyzed phosphorylation plays an important role in cell physiology by regulating a myriad of cellular functions. Thus aberrant kinase activity is implicated in various diseases. Methods are needed to discover kinase substrates and map signaling pathways to explore biology and to help drug discovery. A few techniques are currently available to discover kinase substrate and map cell signaling. However, to augment kinase substrate discovery approaches, it is essential to develop alternative techniques. Pflum has recently discovered cosubstrate promiscuity of protein kinases with gamma-modified ATP analogs. Here, kinase-catalyzed biotinylation with ATP-biotin was used to develop novel tools to discover kinase substrates …

An Investigation Of The Mechanism Of Traumatic Brain Injury Caused By Blast In The Open Field, Ke Feng

Wayne State University Dissertations

Blast-induced traumatic brain injury (bTBI) is a signature wound of modern warfare. The current incomplete understanding of its injury mechanism impedes the development of strategies for effective protection of bTBI. Despite a considerable amount of experimental animal studies focused on the evaluation of brain neurotrauma caused by blast exposure, there is very limited knowledge on the biomechanical responses of the gyrenecephalic brain subjected to primary free-field blast waves imposed in vivo, and the correlation analysis between the biomechanical responses and its injury outcomes. Such information is crucial to the development of injury criteria of bTBI.

This study aims to evaluate …

Sleep Disturbance And The Immunological Acute Phase Response In Hospitalized Post-Operative Adults., Jean Dorothy Humphries

Wayne State University Dissertations

Abstract

Sleep Disturbance and the Immunological Acute Phase Response

in Postoperative Hospitalized Adults

Abstract

The purpose of this study was to examine the subjective and objective (actigraphy) sleep patterns, the immunological acute phase response of IL1-β and TNF-α, and the physiological stress response of cortisol and systolic blood pressure in post-operative abdominal surgical patients. Nineteen subjects, 10 men and 9 women, mean age 45.63 years (SD = 11.44) were enrolled between April 2015 and March 2016. All subjects were elective major invasive abdominal surgery patients. Laparoscopic surgery occurred in 10 patients and incisional surgery occurred in 9 patients. This descriptive …

Anti-Cancer Effects Of Tocotrienols In Nsclc, Lichchavi Raj Raj

Wayne State University Dissertations

Lung cancer is one of the leading causes of death among cancers, with non-small cell lung cancer (NSCLC) accounting for 80-85% of all lung cancers and a five-year survival rate of 5 % at stage IIIB. Delta-tocotrienol (δT) including other tocotrienol isomers has been shown to exhibit anti-tumor activity via inhibition of different signaling pathways in tumors including NSCLC. Previously we reported that δT reduced cell invasion via inhibition of the Notch-1 and NF-κb pathway.

Matrix metallopeptidase 9 (MMP9) dependent cell migration and invasion are key processes in cancer metastasis. Hence, its suppression is a promising strategy for cancer therapeutics. …

Synergistic Effect Of Natural Antimicrobials Produced From Food On Foodborne Pathogens And Effect Of Meat Production Method On Quality And Shelf Life Of Meat, Mahdi Hassan Al-Ali

Wayne State University Dissertations

Meat is highly perishable food since it contains sufficient nutrients needed to support the growth of microorganisms which is effect of nutritional value and spoilage of meat. There are many methods are available to control food pathogens in meat. Using natural antimicrobial may be is a good option because it is provide many benefits. This study showed the synergistic effect of individual and combinations of lactoferrin, lysozyme and nisin in-vitro and in-vivo (in meat) had significant effect (P < 0.05) on reducing the number of foodborne pathogens in meat. Toxigenic Staphylococcus aureus contamination in meat is a major problem in public health due to the production of heat-stable enterotoxins. Also, S.aureus expresses an many array of virulence factors contribute to the ability of S. aureus to cause infection, our results showed that high percentage (42.9) of S. aureus in meat and 80.9 % of S. aureus isolates contained at least one enterotoxin gene. The three most common enterotoxin genes in meat were sea gene (61.9%) followed by seh gene (33.3%) and sei gene (30.1). Some of S. aureus isolates contained more than one enterotoxin gene. In addition, our results indicated that S. aureus isolates from meat showed different antimicrobial resistance levels against fourteen antibiotics. Also, S. aureus multidrug resistant were high in meat. There are different types of meat based on the meat production method. Halal meat is produced without stunning prior to slaughter, resulting in a rapid and complete bleeding of animals. Our results showed that halal meat production method resulted in significantly lower residual heme iron than conventional method with stunning (non-halal method). Microbiological analyses of fresh meat samples showed that halal meat production method had significantly lower (P < 0.05) microbial count than non-halal meat method. Storage of meat is critical because during storage even with proper refrigeration, the meat ultimately undergoes deteriorative changes including microbial spoilage, oxidative changes. Our results indicated that meat production method significantly affects the meat quality not only for fresh meat but also during storage. Microbiological analyses of meat samples during storage for three weeks at 4°C showed that halal meat method had significantly lower (P < 0.05) microbial count than non-halal meat. Physiochemical analyses showed that quality indicators for meat such as lipid oxidation, drip loss, pH, and heme iron content were significantly lower (P < 0.05) in halal meat than non-halal meat during storage. Halal meat processing may be advantageous in reducing bacterial colonization, increasing the usable shelf life, and improving the quality of the fresh and stored meat.

Neuroembryology, D. Darnell, Scott F. Gilbert

Biology Faculty Works

How is it that some cells become neurons? And how is it that neurons become organized in the spinal cord and brain to allow us to walk and talk, to see, recall events in our lives, feel pain, keep our balance, and think? The cells that are specified to form the brain and spinal cord are originally located on the outside surface of the embryo. They loop inward to form the neural tube in a process called neurulation. Structures that are nearby send signals to the posterior neural tube to form and pattern the spinal cord so that the dorsal …

Morphological Study And Biochemical Characterization Of The Alveolate Flagellate Colpodella Sp. (Apicomplexa) In A Diprotist Culture With Bodo Caudatus, Lauren Dulik, Raghavendra Yadavalli

Undergraduate Research Posters 2017

Plasmodium falciparum, the causative agent of severe human malaria shares the presence of apical complex organelles with the free-living predatory alveolate, Colpodella sp. In this study we investigated morphological, biochemical and molecular characteristics of Colpodella sp. in a diprotist culture containing Bodo caudatus as prey. Colpodella attaches to its prey using the apical end. Attachment lasted for approximately 20 minutes while the cytoplasmic contents of the prey were aspirated into the posterior food vacuole of Colpodella in a process known as myzocytosis. Indirect immunofluorescence assay (IFA) using P. falciparum rhoptry specific antibodies showed intense reactivity with cytoplasmic vesicles of Colpodella …

Purification And Crystallization Trials Of The Dihydroorotase From Methanococcus Jannaschii, Amy K. Dadisman

Undergraduate Research Posters 2017

Dihydroorotase is the enzyme that catalyzes the third step of the de novo biosynthesis of pyrimidines. M. jannaschii is a hyperthermophillic archaeon that can serve as a model organism for research purposes. This experiment is a first step toward elucidating the structure of the dihydroorotase in M. jannaschii. The enzyme was purified by salting out and heating the solution and then putting the supernatant through cation exchange chromatography and hydrophobic interaction chromatography. Twenty-four conditions were tested to determine if a crystal of dihydroorotase could be formed. Two of these conditions led to preliminary crystal formation. These findings can be utilized …

Express Recombinant Tb12990 Protein From E. Coli For Dna Binding Analysis, Alex Lotozynski

Undergraduate Research Posters 2017

Trypanosoma brucei is a parasitic protozoan species, causing sleeping sickness in humans and nagana in livestock. Its vector, the tsetse fly, feeds on an infected host and passes the parasites into the bloodstream of other mammalian hosts. The unique challenge for elimination is its complex process of antigenic variation, where the parasite regularly switches its major surface antigen, VSG. When the parasite enters the mammalian host, the host responds by making a corresponding antibody against its major surface antigen, VSG. However, although most parasites are eliminated, a small population can escape due to their altered VSG coat. The expression sites …

An Evaluation Of Unionidae Diversity In The Rocky River And How Population Density Has Changed Over Time In Comparison To Observations Made Over 15 Years Ago, Jamil Wilson

Undergraduate Research Posters 2017

This study was undertaken to determine the changes in freshwater bivalve population since the survey conducted in 2001 in the northern region of the Rocky River, Ohio, USA. During our study, we discovered 69 live specimens and 58 shells most of which were found in two distinct locations near the top and bottom of the area surveyed. Our finds consisted of eight species in comparison to the nine that were seen in the same area of the 2001 study. Our results showed that Leptodea fragilis populations have decreased in the main stream of the Rocky River since the observation 2001, …

Utilizing Arcgis To Map Land Use Change In Missouri River Watersheds, Ethan Jennings

Sustainable RIVER

No abstract provided.

The Examination Of Hip Joint Kinematics With Iwalk In Walking Gait, Tyler Champagne

Undergraduate Review

The purpose of this study was to examine the kinematic movements of the lower limbs involved in walking with a new hands-free crutch known as iWalk, manufactured by iWalkFree Inc. Recently, this new crutch has been developed to reduce underarm stress from conventional crutches, and improve walking efficiency. This study examined the movements with the iWalk by simulating a lower limb injury to the right lower limb in ten healthy female individuals in order to evaluate the kinematics of walking gait, specifically the hip joint angle of the nonweight bearing limb. The results of the study showed a significant increase …

Industrial Oilseed Crops For Tennessee, Jason P. De Koff, Prabodh Illukpitiya, Shivam Chawla, Richard Link

Extension Publications

No abstract provided.

Network Analysis Of Farmer Groups, A Training Manual For Extension Educators, Stephan J. Goetz, Yicheol Han, Erica Hildabridle, Lan Li, Fisseha Tegegne, Stephan Tubene, Andy Wetherill

Extension Publications

No abstract provided.

Woody Ornamental Disease Management Research Reports 2017, Fulya Baysal-Gurel

Extension Publications

No abstract provided.

Boxwood Phytophthora, Fulya Baysal-Gurel, Niamul Kabir, Angelo Randaci

Extension Publications

No abstract provided.

Steroids: A Growing Dilemma In Athletics, Seara Ontiveros

Nebraska College Preparatory Academy: Senior Capstone Projects

A comprehensive and straight forward description of what exactly steroids are and what they do to the body is described by Gary Wadler, a health major at the New York University School of Medicine, he comments: “When the receptor sites in their bodies, which don’t have much testosterone in them, suddenly are presented with a lot of testosterone, they get activated…The unbalance of hormones increases the red blood cell formations... They’ll get more muscular, more defined. They’ll lose some fat, and increase their lean body mass, [they’ll] get stronger”. Although anabolic steroids and other hormones are consumed by many athletes …

Geographic Distribution: Acrantophis Dumerili (Duméril’S Madagascan Ground Boa). Usa. Florida., Louis A. Somma, Kenneth L. Krysko, Laurence L. Conner

Papers in Herpetology

The geographic distribution of Acrantophis dumerili, a nonindigenous introduced species in Florida, with new records, is presented.

Acrantophis dumerili is indigenous to southern and southwestern Madagascar. We provide the first vouchers for Miami-Dade and Bay counties, which were likely escaped or released pets. Florida already has three established species of booid snakes (one boa, two pythons), all introduced through the pet trade pathway. Although there is no clear evidence for an established population of A. dumerili in Florida at this time, the Bay County individuals in a rural area in the Florida panhandle are a particular concern given that two …