Life Sciences Commons^™

Myogenic Progenitor Cells Control Extracellular Matrix Production By Fibroblasts During Skeletal Muscle Hypertrophy, Christopher S. Fry, Tyler J. Kirby, Kate Kosmac, John J. Mccarthy, Charlotte A. Peterson

Physiology Faculty Publications

Satellite cells, the predominant stem cell population in adult skeletal muscle, are activated in response to hypertrophic stimuli and give rise to myogenic progenitor cells (MPCs) within the extracellular matrix (ECM) that surrounds myofibers. This ECM is composed largely of collagens secreted by interstitial fibrogenic cells, which influence satellite cell activity and muscle repair during hypertrophy and aging. Here we show that MPCs interact with interstitial fibrogenic cells to ensure proper ECM deposition and optimal muscle remodeling in response to hypertrophic stimuli. MPC-dependent ECM remodeling during the first week of a growth stimulus is sufficient to ensure long-term myofiber hypertrophy. …

Ck2—An Emerging Target For Neurological And Psychiatric Disorders, Julia Castello, Andre Ragnauth, Eitan Friedman, Heike Rebholz

Publications and Research

Protein kinase CK2 has received a surge of attention in recent years due to the evidence of its overexpression in a variety of solid tumors and multiple myelomas as well as its participation in cell survival pathways. CK2 is also upregulated in the most prevalent and aggressive cancer of brain tissue, glioblastoma multiforme, and in preclinical models, pharmacological inhibition of the kinase has proven successful in reducing tumor size and animal mortality. CK2 is highly expressed in the mammalian brain and has many bona fide substrates that are crucial in neuronal or glial homeostasis and signaling processes across synapses. Full …

Inhibition Of Mammalian Glycoprotein Ykl-40 Identification Of The Physiological Ligand, Abhishek A. Kognole, Christina M. Payne

Chemical and Materials Engineering Faculty Publications

YKL-40 is a mammalian glycoprotein associated with progression, severity, and prognosis of chronic inflammatory diseases and a multitude of cancers. Despite this well documented association, identification of the lectin′s physiological ligand and, accordingly, biological function has proven experimentally difficult. YKL-40 has been shown to bind chito-oligosaccharides; however, the production of chitin by the human body has not yet been documented. Possible alternative ligands include proteoglycans, polysaccharides, and fibers like collagen, all of which makeup the extracellular matrix. It is likely that YKL-40 is interacting with these alternative polysaccharides or proteins within the body, extending its function to cell biological roles …

Smokejumper Obituary: Rubio, Ray F. (Redmond 1995), National Smokejumper Association

Smokejumper Obituaries

No abstract provided.

Effect Of Trehalose As An Additive To Dimethyl Sulfoxide Solutions On Ice Formation, Cellular Viability, And Metabolism., Jason Solocinski, Quinn Osgood, Mian Wang, Aaron Connolly, Michael A. Menze, Nilay Chakraborty

Faculty and Staff Scholarship

Cryopreservation is the only established method for long-term preservation of cells and cellular material. This technique involves preservation of cells and cellular components in the presence of cryoprotective agents (CPAs) at liquid nitrogen temperatures (−196 °C). The organic solvent dimethyl sulfoxide (Me₂SO) is one of the most commonly utilized CPAs and has been used with various levels of success depending on the type of cells. In recent years, to improve cryogenic outcomes, the non-reducing disaccharide trehalose has been used as an additive to Me₂SO-based freezing solutions. Trehalose is a naturally occurring non-toxic compound found in bacteria, …

How Random Noise And A Graphical Convention Subverted Behavioral Scientists' Explanations Of Self-Assessment Data: Numeracy Underlies Better Alternatives, Edward Nuhfer, Steven Fleisher, Christopher Cogan, Karl Wirth, Eric Gaze

Numeracy

Despite nearly two decades of research, researchers have not resolved whether people generally perceive their skills accurately or inaccurately. In this paper, we trace this lack of resolution to numeracy, specifically to the frequently overlooked complications that arise from the noisy data produced by the paired measures that researchers employ to determine self-assessment accuracy. To illustrate the complications and ways to resolve them, we employ a large dataset (N = 1154) obtained from paired measures of documented reliability to study self-assessed proficiency in science literacy. We collected demographic information that allowed both criterion-referenced and normative-based analyses of self-assessment data. …

Identification Of Candidate Infection Genes From The Model Entomopathogenic Nematode Heterorhabditis Bacteriophora., Jonathan Vadnal, Ramesh Ratnappan, Melissa Keaney, Eric Kenney, Ioannis Eleftherianos, Damien O'Halloran, John M. Hawdon

Microbiology, Immunology, and Tropical Medicine Faculty Publications

BACKGROUND: Despite important progress in the field of innate immunity, our understanding of host immune responses to parasitic nematode infections lags behind that of responses to microbes. A limiting factor has been the obligate requirement for a vertebrate host which has hindered investigation of the parasitic nematode infective process. The nematode parasite Heterorhabditis bacteriophora offers great potential as a model to genetically dissect the process of infection. With its mutualistic Photorhabdus luminescens bacteria, H. bacteriophora invades multiple species of insects, which it kills and exploits as a food source for the development of several nematode generations. The ability to culture …

U.S. Drought Monitor, January 3, 2017, David Miskus

United States Agricultural Commodities in Drought Archive

Drought map of U.S. for January 3, 2017 (1/3/17) plus: U.S. crop areas experiencing drought (map), Approximate percentage of crop located in drought, by state (bar graph), Percent of crop area located in drought, past 52 weeks (line graph) for: Corn, Soybeans, Hay, Cattle, Winter wheat.

Differential Methylation Between Ethnic Sub-Groups Reflects The Effect Of Genetic Ancestry And Environmental Exposures, Joshua M. Galanter, Christopher R. Gignoux, Sam S. Oh, Dara Torgerson, Maria Pino-Yanes, Neeta Thakur, Celeste Eng, Donglei Hu, Scott Huntsman, Harold J. Farber, Pedro C. Avila, Emerita Brigino-Buenaventura, Michael A. Lenoir, Kelly Meade, Denise Serebrisky, William Rodriguez-Cintron, Rajesh Kumar, Jose R. Rodrıguez-Cintron, Max A. Seibold, Luisa N. Borrell, Esteban G. Burchard, Noah Zaitlen

Publications and Research

Populations are often divided categorically into distinct racial/ethnic groups based on social rather than biological constructs. Genetic ancestry has been suggested as an alternative to this categorization. Herein, we typed over 450,000 CpG sites in whole blood of 573 individuals of diverse Hispanic origin who also had high-density genotype data. We found that both self- identified ethnicity and genetically determined ancestry were each significantly associated with methylation levels at 916 and 194 CpGs, respectively, and that shared genomic ancestry accounted for a median of 75.7% (IQR 45.8% to 92%) of the variance in methylation associated with ethnicity. There was a …

Streptomyces Exploration Is Triggered By Fungal Interactions And Volatile Signals, Stephanie E. Jones, Louis Ho, Christiaan A. Rees, Jane E. Hill, Justin R. Nodwell, Marie A. Elliot

Dartmouth Scholarship

It has long been thought that the life cycle of Streptomyces bacteria encompasses three developmental stages: vegetative hyphae, aerial hyphae and spores. Here, we show interactions between Streptomyces and fungi trigger a previously unobserved mode of Streptomyces development. We term these Streptomyces cells ‘explorers’, for their ability to adopt a non-branching vegetative hyphal conformation and rapidly transverse solid surfaces. Fungi trigger Streptomyces exploratory growth in part by altering the composition of the growth medium, and Streptomyces explorer cells can communicate this exploratory behaviour to other physically separated streptomycetes using an airborne volatile organic compound (VOC). These results reveal that interkingdom …

Collective Behaviour In Video Viewing: A Thermodynamic Analysis Of Gaze Position, Kate Burleson-Lesser, Flaviano Morone, Paul Deguzman, Lucas C. Parra, Hernan Makse

Publications and Research

Videos and commercials produced for large audiences can elicit mixed opinions. We wondered whether this diversity is also reflected in the way individuals watch the videos. To answer this question, we presented 65 commercials with high production value to 25 individuals while recording their eye movements, and asked them to provide preference ratings for each video. We find that gaze positions for the most popular videos are highly correlated. To explain the correlations of eye movements, we model them as ªinteractionsº between individuals. A thermodynamic analysis of these interactions shows that they approach a ªcritical º point such that any …

Isolation, Culture And Characterization Of Hirsutella Sinensis Mycelium From Caterpillar Fungus Fruiting Body, Yun-Fei Komi, Jian-Ching Liau, Chien-Sheng Lee, Chen-Yaw Chiu, Jan Martel, Chuan-Sheng Lin, Shan-Fu Tseng, David M. Ojcius, Chia-Chen Lu, Hsin-Chih Lai, John Ding-E. Young

All Dugoni School of Dentistry Faculty Articles

The caterpillar fungus Ophiocordyceps sinensis (previously called Cordyceps sinensis) has been used for centuries in Asia as a tonic to improve health and longevity. Recent studies show that O. sinensis produces a wide range of biological effects on cells, laboratory animals and humans, including anti-fatigue, anti-infection, anti-inflammatory, antioxidant, and anti-tumor activities. In view of the rarity of O. sinensis fruiting bodies in nature, cultivation of its anamorph mycelium represents a useful alternative for large-scale production. However, O. sinensis fruiting bodies harvested in nature harbor several fungal contaminants, a phenomenon that led to the isolation and characterization of a large number …

Three-Dimensional Imaging Of The Intracellular Assembly Of A Functional Viral Rna Replicase Complex, Isabel Fernández De Castro, José J. Fernández, Daniel Barajas, Peter D. Nagy, Cristina Risco

Plant Pathology Faculty Publications

Positive-strand RNA viruses, which can be devastating pathogens in humans, animals and plants, replicate their genomes on intracellular membranes. Here, we describe the three-dimensional ultrastructural organization of a tombusvirus replicase in yeast, a valuable model for exploring virus–host interactions. We visualized the intracellular distribution of a viral replicase protein using metal-tagging transmission electron microscopy, a highly sensitive nanotechnology whose full potential remains to be developed. These three-dimensional images show how viral replicase molecules are organized when they are incorporated into the active domains of the intracellular replication compartment. Our approach provides a means to study protein activation mechanisms in cells …

The Family Rhabdoviridae: Mono- And Bipartite Negative-Sense Rna Viruses With Diverse Genome Organization And Common Evolutionary Origins, Ralf G. Dietzgen, Hideki Kondo, Michael M. Goodin, Gael Kurath, Nikos Vasilakis

Plant Pathology Faculty Publications

The family Rhabdoviridae consists of mostly enveloped, bullet-shaped or bacilliform viruses with a negative-sense, single-stranded RNA genome that infect vertebrates, invertebrates or plants. This ecological diversity is reflected by the diversity and complexity of their genomes. Five canonical structural protein genes are conserved in all rhabdoviruses, but may be overprinted, overlapped or interspersed with several novel and diverse accessory genes. This review gives an overview of the characteristics and diversity of rhabdoviruses, their taxonomic classification, replication mechanism, properties of classical rhabdoviruses such as rabies virus and rhabdoviruses with complex genomes, rhabdoviruses infecting aquatic species, and plant rhabdoviruses with both mono- …

Increased Ros Production In Non-Polarized Mammary Epithelial Cells Induces Monocyte Infiltration In 3d Culture, Linzhang Li, Jie Chen, Gaofeng Xiong, Daret K. St. Clair, Wei Xu, Ren Xu

Markey Cancer Center Faculty Publications

Loss of epithelial cell polarity promotes cell invasion and cancer dissemination. Therefore, identification of factors that disrupt polarized acinar formation is crucial. Reactive oxygen species (ROS) drive cancer progression and promote inflammation. Here, we show that the non-polarized breast cancer cell line T4-2 generates significantly higher ROS levels than polarized S1 and T4R cells in three-dimensional (3D) culture, accompanied by induction of the nuclear factor κB (NF-κB) pathway and cytokine expression. Minimizing ROS in T4-2 cells with antioxidants reestablished basal polarity and inhibited cell proliferation. Introducing constitutively activated RAC1 disrupted cell polarity and increased ROS levels, indicating that RAC1 is …

The Magnaporthe Oryzae Nitrooxidative Stress Response Suppresses Rice Innate Immunity During Blast Disease, Margarita Marroquin-Guzman, David E. Hartline, Janet D. Wright, Christian G. Elowsky, Travis J. Bourret, Richard A. Wilson

Department of Plant Pathology: Faculty Publications

Understanding how microorganisms manipulate plant innate immunity and colonize host cells is a major goal of plant pathology. Here, we report that the fungal nitrooxidative stress response suppresses host defenses to facilitate the growth and development of the important rice pathogen Magnaporthe oryzae in leaf cells. Nitronate monooxygenases encoded by NMO genes catalyze the oxidative denitrification of nitroalkanes. We show that the M. oryzae NMO2 gene is required for mitigating damaging lipid nitration under nitrooxidative stress conditions and, consequently, for using nitrate and nitrite as nitrogen sources. On plants, the Δnmo2 mutant strain penetrated host cuticles like wild type, …

The Morphogenesis-Related Ndr Kinase Pathway Of Colletotrichum Orbiculare Is Required For Translating Plant Surface Signals Into Infection-Related Morphogenesis And Pathogenesis, Sayo Kodama, Junya Ishizuka, Ito Miyashita, Takaaki Ishii, Takumi Nishiuchi, Hideto Miyoshi, Yasuyuki Kubo

Department of Plant Pathology: Faculty Publications

Plant infection by pathogenic fungi involves the differentiation of appressoria, specialized infection structures, initiated by fungal sensing and responding to plant surface signals. How plant fungal pathogens control infection-related morphogenesis in response to plant-derived signals has been unclear. Here we showed that the morphogenesis-related NDR kinase pathway (MOR) of the cucumber anthracnose fungus Colletotrichum orbiculare is crucial for appressorium development following perception of plant-derived signals. By screening of random insertional mutants, we identified that the MOR element CoPag1 (Perish-in-theabsence-of-GYP1) is a key component of the plant-derived signaling pathway involved in appressorium morphogenesis. Constitutive activation of the NDR kinase …

Lsp Family Proteins Regulate Antibiotic Biosynthesis In Lysobacter Enzymogenes Oh11, Ruping Wang, Huiyong Xu, Yangyang Zhao, Juan Zhang, Gary Y. Yuen, Guoliang Qian, Fengquan Liu

Department of Plant Pathology: Faculty Publications

Ax21 family proteins have been shown to play regulatory roles in plant- and animal-pathogenic species in the bacterial family Xanthomonadaceae, but the protein have not been investigated previously in the non-pathogenic members of this bacterial family. Lysobacter enzymogenes, is a non-pathogenic species known for its capacity as a biocontrol agent of plant pathogens. It is also noted for the production of antimicrobial secondary metabolites, heat stable antifungal factor (HSAF) and WAP-8294A2, that have potential for agricultural and pharmaceutical applications. The species also displays type IV pili-dependent twitching motility and the production of multiple extracellular lytic enzymes as additional biocontrol-related traits. …

Species Delimitation And Description Of Mesocriconema Nebraskense N. Sp. (Nematoda: Criconematidae), A Morphologically Cryptic, Parthenogenetic Species From North American Grasslands, Magdalena Olson, Timothy Harris, Rebecca Higgins, Peter Mullin, Kirsten Powers, Sean Olson, Thomas O. Powers

Department of Plant Pathology: Faculty Publications

Nematode surveys of North American grasslands conducted from 2010 to 2015 frequently recovered a species of criconematid nematode morphologically resembling Mesocriconema curvatum. These specimens were recovered from remnant native prairies in the central tallgrass ecoregion of North America, and not from surrounding agroecosystems. Historical records indicate that M. curvatum is a cosmopolitan species feeding on a wide range of agronomic and native plants. DNA barcoding indicates North American grasslands contain at least 10 phylogenetically distinct lineages of Mesocriconema that resemble, but are not, M. curvatum. Analysis of the two most common lineages reveals two distinctly different population structures. …

Corn Disease Update, Tamra A. Jackson-Ziems, Terra Hartman

Department of Plant Pathology: Faculty Publications

Several diseases were important in the 2016 Nebraska corn crop and impacted yield in some areas. Many of these diseases developed as a result of extreme weather events that were favorable for disease development. Most of those diseases are caused by pathogens that are capable of survival in the crop debris or residue, and so they are more likely to develop again in future years if environmental conditions are favorable again. This article summarizes some of Nebraska’s most important corn disease problems in 2016, tips for diagnosis, and management strategies.

Bacterial Leaf Streak

Gray Leaf Spot

Southern Rust

Stalk Rot …

Structure Of The Chlorovirus Pbcv-1 Major Capsid Glycoprotein Determined By Combining Crystallographic And Carbohydrate Molecular Modeling Approaches, Cristina De Castro, Thomas Klose, Immacolata Speciale, Rosa Lanzetta, Antonio Molinaro, James L. Van Etten, Michael G. Rossmann

James Van Etten Publications

The glycans of the major capsid protein (Vp54) of Paramecium bursaria chlorella virus (PBCV-1) were recently described and found to be unusual. This prompted a reexamination of the previously reported Vp54 X-ray structure. A detailed description of the complete glycoprotein was achieved by combining crystallographic data with molecular modeling. The crystallographic data identified most of the monosaccharides located close to the protein backbone, but failed to detect those further from the glycosylation sites. Molecular modeling complemented this model by adding the missing monosaccharides and examined the conformational preference of the whole molecule, alone or within the crystallographic environment. Thus, combining …

Dragonfly Distributions In North Dakota, Andre Delorme Ph.D, Hayden Zander

Datasets

Set of data for dragonflies (Order Odonata, Suborder Anisoptera) collected in 2016-2017. Data includes species, GPS coordinates, date collected, and sex of adults.

Chapter 1 - The Fauna: A Place To Call Home, Janice M. Glime

Bryophyte Ecology Volume 2: Bryological Interaction

Explore the contents of Bryophyte Ecology, Volume 2, Chapter 1 - The Fauna by clicking the links above. For the Contents section of this ebook, as well as Volumes 1 through 5, please visit the Bryophyte Ecology Main Page.

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Ebook sponsored by Michigan Technological University and the International Association of Bryologists.

Chapter 6 - Onychophora, Janice M. Glime

Bryophyte Ecology Volume 2: Bryological Interaction

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Ebook sponsored by Michigan Technological University and the International Association of Bryologists.

Chapter 8 - Arthropods: Harvestmen And Pseudoscorpions, Janice M. Glime

Bryophyte Ecology Volume 2: Bryological Interaction

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Ebook sponsored by Michigan Technological University and the International Association of Bryologists.

Chapter 2 - Protozoa, Janice M. Glime

Bryophyte Ecology Volume 2: Bryological Interaction

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Ebook sponsored by Michigan Technological University and the International Association of Bryologists.

Chapter 9 - Arthropods: Mites, Janice M. Glime

Bryophyte Ecology Volume 2: Bryological Interaction

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Ebook sponsored by Michigan Technological University and the International Association of Bryologists.

This video of a mite feeding on antheridia of Haplomitrium mnioides accompanies this chapter: https://digitalcommons.mtu.edu/bryophyte-ecology-video/2/

Chapter 10 - Arthropods: Crustacea, Janice M. Glime

Bryophyte Ecology Volume 2: Bryological Interaction

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Chapter 13 - Fish, Janice M. Glime

Bryophyte Ecology Volume 2: Bryological Interaction

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Ebook sponsored by Michigan Technological University and the International Association of Bryologists.

Chapter 5 - Tardigrades, Janice M. Glime

Bryophyte Ecology Volume 2: Bryological Interaction

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Ebook sponsored by Michigan Technological University and the International Association of Bryologists.