Life Sciences Commons^™

Mental Fatigue On Landing Performance, Madison Marie Gaffney

Dissertations and Theses

Mental fatigue has been shown to impair physical performance, especially for endurance-based sports. However, little research has been done regarding the impacts of mental fatigue on shorter maximal effort movements during a common sport related activity such as the depth jump. The purpose of this study was to investigate the effects of mental fatigue on short maximal performance efforts and predisposing biomechanical variables for non-contact ACL tears during depth-jumps in 18 Division I female soccer players. Each participant completed five depth jumps, followed by a 30-minute Stroop task to induce mental fatigue, and then completed five more depth jumps. Multiple …

Modulation Of Stress-Induced Behaviors Through Orexinergic Signaling In The Basolateral Amygdala, Jazmine D W Yaeger

Dissertations and Theses

Stress initiates behavioral disturbances, which are often seen as symptoms of psychiatric disorders, like post-traumatic stress disorder (PTSD), depression, and anxiety. While stress is involved in the formation of disordered states, only certain individuals are vulnerable to, and therefore experience, these outcomes. Further, females are more likely to be diagnosed with stress-induced psychiatric disorders. Elements within stress neurocircuitry offer insight into differential behavioral outcomes associated with stressful experiences; and the basolateral amygdala (BLA), where pro- and anti-stress signals are integrated, is likely an important mediator in phenotype development. The orexin system, too, while being strongly associated with sleep, motivation, and …

Forage News [2021-12], Department Of Plant And Soil Sciences, University Of Kentucky

Forage News

No abstract provided.

Core-Atac: A Deep Learning Model For The Functional Classification Of Regulatory Elements From Single Cell And Bulk Atac-Seq Data., Asa Thibodeau, Shubham Khetan, Alper Eroglu, Ryan Tewhey, Michael L. Stitzel, Duygu Ucar

Faculty Research 2021

Cis-Regulatory elements (cis-REs) include promoters, enhancers, and insulators that regulate gene expression programs via binding of transcription factors. ATAC-seq technology effectively identifies active cis-REs in a given cell type (including from single cells) by mapping accessible chromatin at base-pair resolution. However, these maps are not immediately useful for inferring specific functions of cis-REs. For this purpose, we developed a deep learning framework (CoRE-ATAC) with novel data encoders that integrate DNA sequence (reference or personal genotypes) with ATAC-seq cut sites and read pileups. CoRE-ATAC was trained on 4 cell types (n = 6 samples/replicates) and accurately predicted known cis-RE functions from …

Inactive Rhomboid Proteins Rhbdf1 And Rhbdf2 (Irhoms): A Decade Of Research In Murine Models., Lisa M. Burzenski, Benjamin E. Low, Vivek Kohar, Leonard D. Shultz, Michael V. Wiles, Vishnu Hosur

Faculty Research 2021

Rhomboid proteases, first discovered in Drosophila, are intramembrane serine proteases. Members of the rhomboid protein family that are catalytically deficient are known as inactive rhomboids (iRhoms). iRhoms have been implicated in wound healing, cancer, and neurological disorders such as Alzheimer's and Parkinson's diseases, inflammation, and skin diseases. The past decade of mouse research has shed new light on two key protein domains of iRhoms-the cytosolic N-terminal domain and the transmembrane dormant peptidase domain-suggesting new ways to target multiple intracellular signaling pathways. This review focuses on recent advances in uncovering the unique functions of iRhom protein domains in normal growth and …

The Mayfly Newsletter, Donna Giberson

The Mayfly Newsletter

The Mayfly Newsletter is the official newsletter of the Permanent Committee of the International Conferences on Ephemeroptera.

Toxicity And Effects Of Tire Crumb Rubber In The Aquatic Environment, Stephanie Laplaca

All Dissertations

Plastic materials have provided innovative solutions to society’s evolving needs and challenges. Due to their durability and resistance to degradation, plastics remain in the environment for long periods of time and can therefore be transported to many environmental compartments such as water, sediment, and biota. Microplastics (MPs) have been defined as synthetic plastic particles that have at least one dimension less than 5 mm and are insoluble in water. Microrubber (MR), a recently acknowledged sub-group of MPs, has been documented in environmental samples more recently, frequently comprising a large portion of total MPs of various samples. In South Carolina specifically, …

Northern Saw-Whet Owl Autumn Migration In Eastern Nebraska: Results From A Three-Year Banding Study, Stephen J. Brenner, Joel G. Jorgensen

Nebraska Bird Review

Prior to 2019, records of NSWOs in Nebraska during fall were limited. There were fewer than five accepted reports in eastern Nebraska since the 1950s (Silcock and Jorgensen, 2021). The Hitchcock banding station along the Missouri River bluffs in nearby western Iowa has captured, banded, and released 20-50 birds during autumn migration for a number of years (J. Toll, personal communication). Furthermore, a single season banding study in central Nebraska during fall 2004 captured 14 NSWOs (Kim 2005), suggesting the species may migrate annually over much of the state in fall, or at least in more years than previously thought. …

The Nebraska Bird Review, Volume 89 Number 4, December 2021

Nebraska Bird Review

Fall Field Report, August - November 2021 by W. Ross Silcock

Book Review: Nest Records of Nebraska Birds by Wayne J. Mollhoff Reviewed by W. Ross Silcock

Northern Saw-whet Owl Autumn Migration in Eastern Nebraska: Results from a Three-year Banding Study by Stephen J. Brenner and Joel G. Jorgensen

Mute Swan Observation at Gavins Point Dam Area, Cedar/Knox Co., Nebraska by Caleb Strand and Mark A. Brogie

Book Review: The Sandhill Crane State: A Naturalist's Guide to Nebraska by Paul Johnsgard, Reviewed by Ruth Stearns

Index to Volume 89

Subscription and Organization Information

Mute Swan Observation At Gavins Point Dam Area, Cedar/Knox Co., Nebraska, Caleb Strand, Mark A. Brogie

Nebraska Bird Review

The Nebraska Ornithologists’ Union Records Committee (NOURC) considers Mute Swan (Cygnus olor) to be Accidental in Nebraska (NOURC 2017) with only two accepted records. A review of Mute Swan status in the Midwest and Nebraska, how individual records in Nebraska are evaluated to determine wild provenance, and a review of Nebraska reports can be found in “The Mute Swan in Nebraska: History and Current Status” (Brogie et al. 2016).

The following is an account of the third NOURC accepted record for Mute Swan in Nebraska. On 11 June 2021 we observed two sub-adult Mute Swans on Lake Yankton, Cedar County, …

(R)-2,5-Dimethoxy-4-Iodoamphetamine [(R)-Doi] Influences Coping Strategies To An Escapable Social Stress, Kevin Thomas Krupp

Dissertations and Theses

Depressive mood disorders are a leading cause of disability worldwide and pharmacological treatments for these disorders are inadequate, requiring new compounds with greater efficacy be investigated. The etiology of depression is heterogeneous; however, it is well established that stress exposure, and the proinflammatory effects of stress have a major role. Psychedelic compounds have rapid and long-lasting anxiolytic and antidepressive effects in humans and animal models of stress induced affective behavior. However, it is not completely understood how these compounds produce such rapid effects. We investigated whether the psychedelic compound (R)-2,5-dimethoxy-4-iodoamphetamine [(R)-DOI], a selective 5-HT2A partial agonist with potent anti-inflammatory properties, …

Understanding Students’ Global Interdependence In Science Instruction, Walter S. Smith

Journal of Global Education and Research

Multiple American educational organizations such as the National Education Association, Association for Supervision and Curriculum Development, and the Council of Chief State School Officers have advocated for globalizing the K-12 curriculum. The National Science Teaching Association (NSTA) in a position statement on international education and the Next Generation Science Standards have produced goals and standards for internationalizing the science curriculum by addressing topics such as climate change, environment, and disease that cross borders. In contrast to those pronouncements on the curriculum, this article views global science education through an instructional lens that focuses on a students’ global interdependence in science …

The Cellular And Genetic Mechanisms Of Stress Response Pathways In Caribbean Coral, Bradford Austin Dimos

Biology Dissertations - Archive

Reef-building corals are in decline around the globe due to both the effects of increased ocean temperatures and the emergence of marine diseases which affect corals. These emerging issues threaten the continued persistence of reefs and the ecosystem which they form as the mechanisms which corals use to respond to stress remain poorly characterized, limiting the success of interventions aimed at reversing these declines. To address these issues my dissertation focused on uncovering the cellular and genetic mechanism utilized by Caribbean corals during periods of stress. Towards this aim my second chapter identified and characterized a mitochondrial stress response pathway …

Sensor-Based Prediction Of Mental Effort During Learning From Physiological Data: A Longitudinal Case Study, Ankita Agarwal, Josephine Graft, Noah Schroeder, William Romine

Biological Sciences Faculty Publications

Trackers for activity and physical fitness have become ubiquitous. Although recent work has demonstrated significant relationships between mental effort and physiological data such as skin temperature, heart rate, and electrodermal activity, we have yet to demonstrate their efficacy for the forecasting of mental effort such that a useful mental effort tracker can be developed. Given prior difficulty in extracting relationships between mental effort and physiological responses that are repeatable across individuals, we make the case that fusing self-report measures with physiological data within an internet or smartphone application may provide an effective method for training a useful mental effort tracking …

Charting A New Frontier Integrating Mathematical Modeling In Complex Biological Systems From Molecules To Ecosystems, Katharine A. White, Kira D. Mcentire, Nicole R. Buan, Lecia Robinson, Elisar Barbar

Department of Biochemistry: Faculty Publications

Advances in quantitative biology data collection and analysis across scales (molecular, cellular, organismal, and ecological) have transformed how we understand, categorize, and predict complex biological systems. This surge of quantitative data creates an opportunity to apply, develop, and evaluate mathematical models of biological systems and explore novel methods of analysis. Simultaneously, thanks to increased computational power, mathematicians, engineers, and physical scientists have developed sophisticated models of biological systems at different scales. Novel modeling schemes can offer deeper understanding of principles in biology, but there is still a disconnect between modeling and experimental biology that limits our ability to fully realize …

Providing Pesticide License Holders Ceu Credits During The Covid 19 Pandemic, Michael Wierda, Cody Zesiger, Jacob Hadfield, Micheal Pace, Paige Wray

Outcomes and Impact Quarterly

USU Extension and UDAF provide continuing education units (CEUs) for pesticide license renewal. However, in 2020, face-to-face meetings were canceled due to COVID-19. Workshop cancellation left CEU seekers with limited options. In response, programming was adapted and 2,992 CEU hours were provided via online sessions.

Effects Of A N2-Fixing Biofertilizer On The Rhizosphere Microbiome And The Influence Of Biochar On Soil Fertility And Microbial Communities, Sarbjeet Niraula

Biology Dissertations - Archive

The rhizosphere microbiota and endosymbionts are the major contributors to biogeochemical cycling and significantly impact the associated host plant. Their association with plant roots is inevitable for plant health and development. The application of bio inoculants that promote plant growth and productivity is a promising alternative to chemical fertilizers in agricultural fields because of their nutrient solubilization activity, and are considered environmentally safe. However, their impact on the soil microbiome has been least studied. The use of bio-inoculants may have favorable or unfavorable impacts on the native microbial community in the rhizosphere. Therefore, we attempt to evaluate the effects of …

Use Patterns And Influencing Factors Of Irrigation Best Management Practices In The Lower Mississippi River Basin, Merri E. Day

Graduate Theses and Dissertations

This study uses the 2016 Irrigation Survey from Arkansas, Louisiana, and Mississippi to document the use of irrigation best management practices (IBMPs), analyze use patterns, and use quantitative methods to determine factors that influence producers’ decisions regarding IBMPs. IBMPs included in the survey can be grouped as: field management practices (zero-grade leveling, precision-grade leveling, end blocking, warped surface, and deep tillage), water flow control practices (computerized pipe-hole selection, multiple-inlet irrigation, surge irrigation, alternate wetting and drying, cutback irrigation, flow meters, and pump timers), water recovery/storage practices (tail-water recovery system and on-farm storage reservoir), and advanced irrigation scheduling practices (soil moisture …

The Effect Of Green Biobased Binder On Structural, Mechanical, Liquid Absorption And Wetting Properties Of Coated Papers, Bilge N. Altay, Charles Klass, Ting Chen, Alexandar Fleck, Cem Aydemir, Arif Karademir, Paul D. Fleming

Articles

Synthetic styrene-butadiene (SB) and styrene-acrylic (SA) latex binders used in paper coating formulations are common and based on unsustainable petroleum sources. Today's papermaking industry turns towards sustainable substitutes that do not compromise quality, and reduce carbon emission, toxic substance release and waste disposal concerns related to fossil fuel sources. In this study, colloidal starch-based latex nanoparticles that do not require cooking were used for pigment coating and coated on the paper surfaces. The effects of these new biobased binders on the structural and mechanical strength properties, liquid absorption, wetting and surface topography of the paper were investigated and compared with …

American Bullfrog (Lithobates Catesbeianus) Diet In Uruguay Compared With Other Invasive Populations In Southern South America, Gabriel Laufer, Noelia Gobel, Mauro Berazategui, Matías Zarucki, Sofía Cortizas, Alvaro Soutullo, Claudio Martinez Debat, Rafael O. De Sá

Biology Faculty Publications

Between 2000-2020, more than ten new populations of the invasive American bullfrog (Lithobates catesbeianus) have been reported in the southern cone of South America. We studied the stomach contents of 126 bullfrogs from a population at an early invasion stage in Uruguay (Acegua, Cerro Largo Department). We observed a rich diet, with extensive prey volume range (1 mm3 to more than 7 000 mm(3)); the most frequent items were Hymenoptera (19.6%), Coleoptera (16.4%), Amphipoda (13.3%), Anura (8.9%) and Heteroptera (8.7%). Despite some overlap, differences were observed in volume (chi(2) = 54.6, p <0.001, d.f. = 2) and prey quantity (F = 8.1, p <0.001, d.f. = 79) between males, females, and juveniles. Juveniles showed significantly higher consumption of terrestrial prey by count (82% of their total ingestion) than adults (29% for males and 32% for females) (chi(2) = 28.5, p <0.001, d.f. = 2). Adults, especially females, showed a high frequency of cannibalism (33% of their total ingestion; chi(2) = 20.9, p <0.001, d.f. = 2). Comparing our data with other bullfrog regional studies, we found great plasticity in trophic habits and differences in the incidence of cannibalism (higher incidence in the populations of Acegua, Uruguay, and Buenos Aires, Argentina). These differences could be related to local biodiversity, but also could be affected by the invasion phase. Cannibalism frequency was higher in small bullfrog populations, where it could be favoring the establishment success. This shift in foraging strategies during the invasion process had been insufficiently evaluated in amphibians. Knowing the ecological determinants for the invasion by bullfrogs can be useful to the development of management strategies.

How Sweet It Is: Fellowship And Continuity In A Church-Based Fall Prevention Program With African American Elders In The Northeastern United States, Michelle L. Ramirez, Cedric H. Jones Jr., Carol Maritz, Donna Jensen

Humboldt Journal of Social Relations

Deaths from unintentional injuries are the seventh leading cause of death among older adults and falls account for the largest percentage of these deaths, with individuals aged ≥85 particularly vulnerable. Physical activity can reduce frailty and prevent falls; however, many elders are not physically active and women, ethnic minorities, and those with low education levels are the least active. Moreover, experiences of racial discrimination can lead to increased stress and unhealthy adaptive behaviors, and the cumulative effects of age and race related stressors have been shown to negatively impact the physical and mental health of elderly African Americans. Thus, participation …

Paleogenomics Illuminates The Evolutionary History Of The Extinct Holocene “Horned” Crocodile Of Madagascar, Voay Robustus, E. Hekkala, J. Gatesy, A. Narechania, R. Meredith, M. Russello, M. L. Aardema, E. Jensen, S. Montanari, C. Brochu, M. Norell, G. Amato

Department of Biology Faculty Scholarship and Creative Works

Ancient DNA is transforming our ability to reconstruct historical patterns and mechanisms shaping modern diversity and distributions. In particular, molecular data from extinct Holocene island faunas have revealed surprising biogeographic scenarios. Here, we recovered partial mitochondrial (mt) genomes for 1300–1400 year old specimens (n = 2) of the extinct “horned” crocodile, Voay robustus, collected from Holocene deposits in southwestern Madagascar. Phylogenetic analyses of partial mt genomes and tip-dated timetrees based on molecular, fossil, and stratigraphic data favor a sister group relationship between Voay and Crocodylus (true crocodiles). These well supported trees conflict with recent morphological systematic work that has consistently …

Local Weather Explains Annual Variation In Northern Goshawk Reproduction In The Northern Great Basin, Usa, Allyson B. Bangerter, Eliana R. Heiser, Jay D. Carlisle, Robert A. Miller

Intermountain Bird Observatory Publications and Presentations

Weather is thought to influence raptor reproduction through effects on prey availability, condition of adults, and survival of nests and young; however, there are few long-term studies of the effects of weather on raptor reproduction. We investigated the effects of weather on Northern Goshawk (Accipiter gentilis; henceforth goshawk) breeding rate, productivity, and fledging date in south-central Idaho and northern Utah, USA. Using data from 42 territories where we found evidence of breeding attempts in ≥1 yr from 2011–2019, we analyzed breeding rates using 315 territory–season combinations, analyzed productivity for 134 breeding attempts, and analyzed fledging date for 118 …

International Society Of Sports Nutrition Position Stand: Caffeine And Exercise Performance, Nanci S. Guest, Trisha A. Vandusseldorp, Michael T. Nelson, Jozo Grgic, Brad J. Schoenfeld, Nathaniel D.M. Jenkins, Shawn M. Arent Ph.D., Cscs*D, Fissn, Facsm, Fnak, Jose Antonio, Jeffrey R. Stout, Eric T. Trexler, Abbie E. Smith-Ryan, Erica R. Goldstein, Douglas S. Kalman, Bill I. Campbell

Faculty Publications

Following critical evaluation of the available literature to date, The International Society of Sports Nutrition (ISSN) position regarding caffeine intake is as follows:1.Supplementation with caffeine has been shown to acutely enhance various aspects of exercise performance in many but not all studies. Small to moderate benefits of caffeine use include, but are not limited to: muscular endurance, movement velocity and muscular strength, sprinting, jumping, and throwing performance, as well as a wide range of aerobic and anaerobic sport-specific actions.2.Aerobic endurance appears to be the form of exercise with the most consistent moderate-to-large benefits from caffeine use, although the magnitude of …

[Review Of] What Is A Complex System? By James Ladyman And Karoline Wiesner. New Haven (Connecticut): Yale University Press. $35.00 (Paper). Xi + 169 P.; Ill.; Index. Isbn: 978-0-300-25110-4. 2020., Joseph Robert Burger

Biology Faculty Publications

No abstract provided.

Tracking Vibrio: Population Dynamics And Community Ecology In Alabama Estuaries, Blair H. Morrison

Graduate Theses and Dissertations (2019 - present)

Integral parts of local culture along the Eastern Mississippi Sound System (EMSS)- eating raw oysters and fishing- can involve contact with vectors of pathogenic Vibrio spp. bacteria. High mortality rates from vibrio infections demonstrate the need for improved understanding of V. vulnificus and V. parahaemolyticus dynamics in the region. This study assessed: 1) meteorological, 2) hydrographic, and 3) biological correlates of V. parahaemolyticus and V. vulnificus in the EMSS from April-October 2019. Spearman’s correlations, linear mixed models, and non-metric dimensional scaling identified significant relationships between Vibrio spp., abiotic, and biotic parameters of the ecosystem. Vibrio spp. population dynamics were largely …

Influence Of Saltwater Submergence On Geohydraulic Properties Of Sand: A Laboratory Investigation, Sudip Basack, Ghritartha Goswami, Sumanpran Sonowal, Moses Karakouzian

Civil and Environmental Engineering and Construction Faculty Research

Saline water intrusion into freshwater aquifers is a major geohydraulic problem relevant to coastal environment. Apart from contaminating the fresh groundwater resources, the saltwater intrusion alters the geotechnical properties of the aquifer materials, affecting the coastal water resource planning and management. The present study focuses on an in-depth laboratory investigation of the influence of saltwater submergence on the geohydraulic properties of sand. The fine sand sample was submerged under saline water of specified concentrations for specific periods, and the alteration in their engineering properties has been studied. It is observed that the specific gravity, dry density, and permeability of fine …

Molecular Mechanisms Underlying The Suppression Of Cardiomyocyte Necroptosis By The Cop9 Signalosome In Mice, Megan T. Lewno

Dissertations and Theses

Background: Within a large subset of heart failure, cardiac ubiquitin-proteasome system (UPS) inadequacy is causative. A vital UPS regulator is the COP9 signalosome (CSN). The CSN holocomplex is formed by 8 unique protein subunits (COPS1~COPS8) and regulates Cullin-RING ligases via Cullin deneddylation. Cardiomyocyte-restricted knockout (cko) of Cops8 causes massive cardiomyocyte necroptosis via the RIPK1-RIPK3-MLKL pathway, resulting in dilated cardiomyopathy (DCM) and shortened lifespan in mice. CSN’s deneddylase resides in COPS5 and Cops5-cko has not been explored. It is important to investigate how the necroptotic pathway within cardiomyocytes is activated in Cops8-cko mice as cardiomyocyte necroptosis has been shown to play …

College Of Natural Sciences Newsletter, December 2021, College Of Natural Sciences

College of Natural Sciences Newsletters and Reports

Volume 2, Issue 12

Page 1 Dean's Message
Page 2 Awards & Recognition
Page 2 Media Coverage of CNS
Page 3 Media Coverage Cont.
Page 4 Science as Art Competition
Page 5 Open PRAIRIE Data
Page 5 Grants Awarded in CNS

Acute Consumption Of A Sugar-Sweetened Beverage Impairs Microvascular Function In Midwestern Hispanic Males, Emma Hirshman, Anne R. Crecelius

Health and Sport Science Faculty Publications

Hispanic males are at risk for cardiovascular disease and consume high levels of sugar-sweetened beverages (SSB); yet, their acute vascular response to SSBs is unknown. Ten healthy Hispanic men (18-45 years old) consumed a SSB and reactive hyperemia was performed prior to, immediately following, and 1-hr post-consumption. Both peak and total (area under the curve) forearm blood flow were attenuated immediately following consumption but returned to at or above pre-consumption levels at the 1-hr test.