Life Sciences Commons^™

Investigating The Phytochemical Profiles Of Wild And Cultivated Blueberries (Vaccinium Spp.) In Central Florida, Anisa Khalid

Honors Undergraduate Theses

Blueberries (Vaccinium spp.) are valued for their high nutritional quality and flavor. There are five species in the Vaccinium genus native to the state of Florida, but only three are palatable to humans: V. myrsinites, V. darrowii, and V. corymbosum. While V. darrowii has been studied extensively due to its successful hybridization with northern highbush blueberry cultivars, V. myrsinites and wild V. corymbosum have been understudied. This study aims to 1) quantify the abundance of various phytochemicals in fruits of these wild blueberry species and compare fruit quality both among the wild taxa and two varieties of …

Serotonin's Proliferative Effects On Lung Cancer Cell Lines, Jessy K. Ntabo

Honors Undergraduate Theses

Serotonin has been widely explored in the brain. Recently, there have been new findings on how serotonin works in the periphery. Serotonin is introduced to the periphery by the enterochromaffin cells and metabolized by the liver and lung. Studies have shown that serotonin plays a role in controlling lung cancer. However, the mechanism by which it initiates tumor formation has not been fully explored. Cell viability was measured in several lung adenocarcinoma cell lines treated with serotonin to study this effect. In GFP-labelled cells, fluorescence intensity was measured for quantification of cell viability. Our data showed an overall increase in …

Proceedings Of The 2022 Passion Fruit Conference: Growing The U.S. Passion Fruit Industry A Strategic Conference For: Growers, Marketers, Researchers, And Stakeholders, Eric T. Stafne

CREC Publications

We are pleased to deliver these proceedings of the passion fruit conference that was held in Homestead, Florida on June 14 and 15, 2022. It was a culmination of a lot of hard work by many people, most of them listed in the previous page. However, it would not have been a success without the attendees who came from various parts of the country to share their experiences growing passion fruit. What follows in these proceedings are the slides of the presentations with by notes taken by attendees along with notes taken of discussion regarding the five priority topic areas: …

Cellular Activation Following Acute And Chronic Ethanol In Glutamatergic Projection Neurons, Annalise Hassan, Sam Gottlieb, Michael F. Miles Md, Phd

IRBEH/Spit for Science Publications and Presentations

No abstract provided.

The Nutritional Condition Of Moose Co-Varies With Climate, But Not With Density, Predation Risk, Or Diet Composition, Jennifer S. Forbey, Daniel P. Melody

Biology Faculty Publications and Presentations

A fundamental question about the ecology of herbivore populations pertains to the relative influence of biotic and abiotic processes on nutritional condition. Nutritional condition is influenced in important, yet poorly understood, ways by plant secondary metabolites (PSMs) which can adversely affect a herbivore’s physiology and energetics. Here we assess the relative influence of various abiotic (weather) and biotic (intraspecific competition, predation risk and diet composition) factors on indicators of nutritional condition and the energetic costs of detoxifying PSMs for the moose population in Isle Royale National Park (U.S.A.). Specifically, we observed interannual variation in the ratio of urea nitrogen to …

Whole Exome Sequencing Identifies A Novel Mutation In Aspm And Ultra-Rare Mutation In Cdk5rap2 Causing Primary Microcephaly In Consanguineous Pakistani Families, Ehtisham Ul Haq Makhdoom, Haseeb Anwar, Shahid Mahmood Baig, Ghulam Hussain

Department of Biological & Biomedical Sciences

Background & objectives: Primary Microcephaly (MCPH) is a rare neurogenetic disease, manifesting congenitally reduced head circumference and non-progressive intellectual disability (ID). To date, twenty-eight genes with biallelic mutations have been reported for this disorder. The study aimed for molecular genetic characterization of Pakistani families segregating MCPH.
Methods: We studied two unrelated consanguineous families (family A and B) presenting >2 patients with diagnostic symptoms of MCPH, born to asymptomatic parents. We employed whole-exome sequencing (WES) of probands to find putative causal mutations. The candidate variants were further confirmed and analyzed for co-segregation by Sanger sequencing of all available members of each …

Deoxyribose Phosphate Aldolase Is Required For Development Of Hematopoietic Stem Cells In The Zebrafish Embryo, Anubhav Thapaliya, Sanyam Patel, Teerth Y. Patel, Sivam J. Bhatt, Erich W. Damm

UROP Posters

Hematopoietic stem cells (HSCs) are an integral part of modern biomedical research because they are precursors to all blood cell lineages in vertebrates. Further understanding of hematopoietic development will allow for improvements in the success of therapeutic bone marrow transplantation; which is a crucial treatment in management of both malignant and non-malignant blood disorders. Although HSC transplantation is curative for many blood disorders, finding compatible donors is difficult due to a need for immunologic compatibility. Consequently, recent research efforts have been directed towards generating HSCs for the patient, from the patient themselves through the directed differentiation of induced pluripotent stem …

Introduction Of Plasmid Dna Into Sneathia Vaginalis; The First Step To Genetic Manipulation, Rea Mansukhani, Cathyrn O'Brien, Zion Mccoy, Kimberly K. Jefferson

UROP Posters

Many bacterial pathogens are capable of secreting one or more toxins, all of which can be categorized based on their function, target, or mechanism of action. Pore-forming toxins, for instance, are characterized based on their ability to perforate the host membrane. This may result in the delivery of bacterial substances into the host cell, release of compounds from the host cell, and/or death of the host cell. Research from our lab has demonstrated that Sneathia vaginalis, a gram-negative anaerobic bacterial species that is associated with bacterial vaginosis and preterm birth, produces a pore-forming toxin referred to as cytopathogenic toxin …

Review Of The Effects Of Asphalt Fume Emission (Vocs And Pahs) In Vitro, In Vivo And Human Studies, Omran Taqi, Nastassja Lewinski, Elham Fini, Eran Rozewski, Judith Klein-Seetharaman

UROP Posters

Review of the effects of Asphalt fume emission (VOCs and PAHs) in vitro, in vivo and human studies

Omran Taqi, Nastassja Lewinski¹

1) Department of Chemical and Life Science Engineering, Virginia Commonwealth University, Richmond, VA

Background

Asphalt is abundantly available around human operations including road paving and roofing sites. However, their emissions and fumes (specifically volatile organic compounds (VOCs) and polycyclic aromatic hydrocarbons (PAHs)) have been found to have adverse effects on health. Asphalt fumes are a class 2A carcinogen and exposure can increase the risk of lung cancer, asthma, headache, fatigue, and other cardiovascular diseases.

Methods

We used …

Astrocyte Elevated Gene-1 (Aeg-1) Deletion Selectively Enhances The Antinociceptive Effects Of Morphine, Apurva Puli, Shivani Patel, Bryan Mckiver, Eda Köseli, Devanand Sarkar Ph.D., M. Imad Damaj Ph.D.

UROP Posters

Background: Opioids are a class of drugs that are utilized in clinical settings to alleviate acute and chronic pain, but can often lead to development of tolerance, addiction and overdose following prolonged usage. Opioids such as morphine function by activating endogenous µ opioid receptors, which are located in various tissues throughout the body. Astrocyte Elevated Gene-1 (AEG-1) is a multifunctional protein that regulates inflammation, myeloid cell activity and lipid metabolism. Studies have shown interactions and overlaps in cellular signaling between the inflammatory/immune responses and the endogenous opioid system which could suggest a role for AEG-1 in opioids effects. Our goal …

Effect Of Agricultural Insurance Program On Income Loss Reduction: A Comparative Study Of Upland And Lowland Farmers In Japan And The Philippines, Armand Christopher C. Rola

Journal of Public Affairs and Development

This paper aims to inquire how agricultural insurance can be an effective and efficient coping mechanism to prevent the poorest in remote rural areas of East Asia and the Pacific from falling into the poverty trap when faced with natural disasters. Field research was conducted to examine upland and lowland farmers’ experiences with agricultural insurance and program implementation by insurance providers in Japan and the Philippines. Secondary data such as online articles, journals, books, news and annual reports, and online websites of government insurance providers in the Philippines and Japan were collected. Primary data were analyzed using descriptive and cost …

Policy Option To Address Low Rice Seed Technology Adoption Of Farmers In Sariaya, Quezon, Philippines, Meljun R. Banogon, Leilanie O. Barrion, Imelda Dg. Olvida, Ma. Theresa R. Sawit

Journal of Public Affairs and Development

The importance of access to and the proper utilization of technology in improving farm productivity is widely recognized. For this reason, many interventions focus on the development and promotion of farm technologies in rural areas. Sariaya, Quezon is one of the recipients of the programs of the Department of Agriculture (DA), particularly the Bayanihan Agri Clusters (BACs), the Rice Competitiveness Enhancement Fund (RCEF), and the Rice Business Innovations Community Program (RiceBIS). While these programs are being implemented, the adoption of certified seeds technology in the community remains low. Policy Delphi technique was employed to formulate policy outcome forecast, issue statement, …

Intellectual Capital To Support Goat Farming Profitability In A Rural Area Of Banjarnegara Regency, Indonesia, Mochamad Sugiarto, Yusmi Nur Wakhidati, Siwi Gayatri, John Enorio M. Perez

Journal of Public Affairs and Development

Goat farming in Banjarnegara Regency, Indonesia has become a driver of the rural economy.　 Banjarnegara Regency, Indonesia has become a driver of the rural economy. Banjarnegara is a mountainous area which is divided into three agroecological zones, namely highland, middle land, and lowland. The research was conducted to　(1) identify the levels of goat farmers’　intellectual capital and goat farming profitability; and (2) analyze the relationship between goat farmers’ intellectual capital and goat farming profitability. A multistage sampling method was conducted to collect data from 180 goat farmers. The research on goat farmers’ intellectual capital was conducted using interviews and …

Evaluation Of Cross-Laminated Timber Panels Produced With Yellow-Poplar (Liriodendron Tulipifera), Rafael Da Rosa Azambuja

Graduate Theses, Dissertations, and Problem Reports (ETD)

Cross-Laminated Timber (CLT) panels are engineered wood products breaking into the building sector. Currently, the range of raw materials used in CLT is still limited to softwoods, while some hardwood species such as yellow-poplar could potentially be used to produce this wood product. Therefore, the main goal of this research was to assess the feasibility of using Appalachian Hardwoods in the production of Cross-Laminated Timber panels. Specifically, the objectives of the research were to 1) Determine the amount of yellow-poplar structural lumber that can be obtained from a representative population of low-grade, yellow-poplar lumber graded for appearance; 2) Evaluate whether …

Sleep And Cardiovascular Reactivity To An Acute Virtual Stressor, Alaina Grace Tiani

Graduate Theses, Dissertations, and Problem Reports (ETD)

Inappropriate response and magnitude of cardiovascular reactivity (CVR) to stress is a proposed mechanism through which environmental stressors are linked with poor cardiovascular health outcomes (Chida & Steptoe, 2010; Krantz & Manuck, 1984). Studies of reactivity to various laboratory tasks commonly control for factors known to influence CVR such as smoking, medication use, caffeine intake, and BMI; however, few have considered the influence of sleep on CVR. In order to determine whether sleep characteristics need to be assessed and considered in studies of CVR, this study aimed to examine the association between indices of sleep quality and the magnitude and …

An Investigation Into The Mechanism Of Proteasome Dysfunction In Neurodegenerative Disease And The Biological Impact Of Proteasome Hyperactivation In C. Elegans, Raymond T. Anderson

Graduate Theses, Dissertations, and Problem Reports (ETD)

Aging is an inevitable process that occurs as humans grow older. It is characterized by the chronological accumulation of cellular damage over time leading to functional decline as an organism grows older. Several processes are thought to contribute to the aging phenomenon, but one of the most prolific of these is the disruption of protein homeostasis (proteostasis). The collapse of proteostasis can lead to accelerated aging and the development of age-related diseases including devastating neurodegenerative diseases (NDs) like Alzheimer and Parkinson disease. Virtually all NDs are characterized by the buildup of proteins in and around neurons resulting in neuronal death …

Opioid Medication Use And Blood Dna Methylation: Epigenome-Wide Association Meta-Analysis, Mikyeong Lee, Roby Joehanes, Daniel L. Mccartney, Minjung Kho, Anke Hüls, Annah B. Wyss, Chunyu Liu, Rosie M. Walker, Sharon L.R. Kardia, Thomas S. Wingo, Adam Burkholder, Jiantao Ma, Archie Campbell, Aliza P. Wingo, Tianxiao Huan, Sinjini Sikdar, Amena Keshawarz, David A. Bennett, Jennifer A. Smith, Kathryn L. Evans, Daniel Levy, Stephanie J. London

Mathematics & Statistics Faculty Publications

Aim: To identify differential methylation related to prescribed opioid use. Methods: This study examined whether blood DNA methylation, measured using Illumina arrays, differs by recent opioid medication use in four population-based cohorts. We meta-analyzed results (282 users; 10,560 nonusers) using inverse-variance weighting. Results: Differential methylation (false discovery rate <0.05) was observed at six CpGs annotated to the following genes: KIAA0226, CPLX2, TDRP, RNF38, TTC23 and GPR179. Integrative epigenomic analyses linked implicated loci to regulatory elements in blood and/or brain. Additionally, 74 CpGs were differentially methylated in males or females. Methylation at significant CpGs correlated with gene expression in blood and/or brain. Conclusion: This study identified DNA …

Examining The Effects Of Exercise-Induced, Physical Stress Overtraining On Stress Biomarkers In Adolescent, C57bl/6 Mice, Curtis Scotty Davis

Theses, Dissertations and Capstones

Exercise has long been established as a therapeutic modality to improve health and related physical fitness, sports performance, and injury/risk reduction in both adults and adolescents (Haff & Triplett, 2015; Kaminsky, 2010). Nonetheless, there is a lack of research investigating the negative effects of exercise overstress (i.e., overtraining syndrome) in these populations, particularly adolescents (Brenner & American Academy of Pediatrics Council on Sports Medicine and Fitness, 2007; Matos & Winsley, 2007). The objective of this study was to examine hormone biochemical markers, anthropometric markers, and behavioral traits, which are associated with overtraining syndrome, in adolescent C57BL/6 mice. A total of …

"Reeling In" Juvenile Sportfish Through Coastal Habitat Restoration: Population, Community, And Trophic Responses In The Indian River Lagoon, Florida, Jennifer Loch

Electronic Theses and Dissertations, 2020-2023

Coastal habitats provide crucial nursery habitat for predatory fishes, but they are in decline worldwide, impacting economically important fisheries. Habitat restoration can simultaneously mitigate the effects of habitat loss and benefit predators (e.g., sportfish), although this relationship is understudied. Here, the response of juvenile sportfish to oyster reef and living shoreline restoration is compared to controls in the Indian River Lagoon, Florida prior to and following restoration for up to three years through examination of community (diversity, assemblage), population (abundance), biometric (size, body condition), ontogenetic, and trophic (gut contents, stable isotopes) dynamics. Stable isotopes were used to quantify dietary history, …

Complex Dna Mixture Deconvolution By Single Cell Genomics: Direct Physical Cell Subsampling And High Sensitivity Dna Typing, Kaitlin Huffman

Electronic Theses and Dissertations, 2020-2023

Biological evidence is often found at crime scenes and can comprise of DNA from the victim(s) and perpetrator(s) to a crime as well as from individuals with no direct relationship to the incident. This can complicate analysis as DNA mixtures are one of the more difficult sources of biological evidence to interpret. Probabilistic genotyping (PG) has greatly aided in mixture analysis. However, even with PG, standard bulk mixture approaches do not always result in probative results as allele overlap, artifacts, or low-level minor contributors inevitably cause genotype information loss. Therefore, deconvolution of forensic DNA mixtures into their individual component DNA …

The Acute Effects Of Continuous And Intermittent Blood Flow Restriction On Sprint Interval Performance And Muscle Oxygen Responses, Aaron Wizenberg

Electronic Theses and Dissertations, 2020-2023

The purpose of this investigation was to examine the effects of intermittent and continuous blood flow restriction (BFR) during sprint interval training (SIT) on muscle mitochondrial function and perceived effort. Fifteen men volunteered to participate in this investigation and were randomly assigned to complete SIT with CBFR, IBFR, and NoBFR. Each SIT session consisted of 2, 30s maximal sprints on a cycle ergometer with a resistance of 7.5% of body mass. Peak power (PP), total work (TW), ratings of perceived exertion (RPE), sprint decrement score (Sdec), and muscle oxygen responses were measured during each sprint. Before (pretest) and after (posttest) …

Automatic Posture Correction Utilizing Electrical Muscle Stimulation, Ravi Kiran Kattoju

Electronic Theses and Dissertations, 2020-2023

Habitually poor posture can lead to repetitive strain injuries that lower an individual's quality of life and productivity. Slouching over computer screens and smart phones, asymmetric weight distribution due to uneven leg loading, and improper loading posture are some of the common examples that lead to postural problems and health ramifications. To help cultivate good postural habits, researchers have proposed slouching, balance, and improper loading posture detection systems that alert users through traditional visual, auditory or vibro-tactile feedbacks when posture requires attention. However, such notifications are disruptive and can be easily ignored. We address these issues with a new physiological …

G-Quadruplex Reporters: Structural Studies And Application For Visual And Fluorescent Detection Of Point Mutations In Nucleic Acid Sequences, Ryan Connelly

Electronic Theses and Dissertations, 2020-2023

DNA-based diagnostics traditionally utilize hybridization probes: strands of DNA complimentary to a target sequence that, upon binding, generate a signal to indicate the presence of the target. The classic hybridization probes are the molecular beacon (MB) and TaqMan probes, both single DNA strands with a fluorophore and quencher at opposing ends. Despite their widespread use in applications such as qPCR due to their ability to multiplex with a variety of bound fluorophores, these probes have several shortcomings: temperature limitations for selective target recognition and differentiating single-nucleotide polymorphisms, intrinsic design limitations to interrogate some target sequences, and a high relative cost …

Stomach Contents And Stable Isotope Analysis Reveal Ontogenetic Shifts And Spatial Variability In Brama Australis Diet, Sebastian A. Klarian, Eric T. Schultz, María Francisca Hernández, Juan Antonio Valdes, Francisco Fernandoy, Mónica Barros, Sergio Neira, Hugo Arancibia

EEB Articles

Many marine fisheries rely on production and energy flow in the pelagic zone, thus sustainable management of exploited pelagic fishes benefits from insight into temporal, spatial and ontogenetic variability in the trophic ecology of these species. Here we analyze stomach contents and stable isotopes to reveal spatial variability (focusing on two fishing grounds, north and south of an oceanographic barrier in the Pacific Ocean) and ontogenetic changes (contrasting immature and mature) in Southern Ray’s Bream (Brama australis) diet composition in Chilean waters. Stomach contents analysis indicated that euphausiids were predominant components of the diet in both fishing grounds and ontogenetic …

Seasonal Reproductive Allocation In Landlocked Alewife Alosa Pseudoharengus, In The Context Of Niche Construction And Eco-Evolutionary Feedbacks, Foivos Mouchlianitis, Eric T. Schultz, Kostas Ganias

EEB Articles

The bidirectional dynamics between species and their biotic and abiotic environments, known as eco-evolutionary feedbacks, may shift the direction of evolution and alter the ecological role of species. Alewife, Alosa pseudoharengus, is an exemplary species to study reciprocal feedbacks between ecology and evolution, owing to repeated independent derivations of a landlocked life history from an ancestral anadromous form. In this study we analysed the reproductive allocation during the spawning season in a landlocked Alewife population in the context of eco-evolutionary feedbacks. We also compared our findings with previous results from a neighbouring anadromous population of the species. Similarities were found …

Fy 21/22 Highlights, Tennessee. Department Of Agriculture

Annual Report & Statistical Summary

This annual report and statistical summary highlights the accomplishments done by the Tennessee Department of Agriculture.

Tolle Lege Works Published In 2022, Mcquade Library

Bibliographies

Compiled Tolle Lege bibliography of works published by members of the Merrimack College Community in 2022. Works include journal articles, books, book chapters, conference presentations and posters, and more.

An Investigation Of The Sled-Push Exercise In Older Adults: Physiological Quantification, Perceived Enjoyment And Body Discomfort, Micheal A. Baumann

Graduate Research Theses & Dissertations

Healthy aging is defined as the process of maintaining and developing functional ability that allows a state of mental and physical wellbeing. Physical activity, particularly exercise training, has been highly recommended for individuals of all ages, especially older adults, as way to maintain, improve or restore functional ability and health. Different modalities and types of exercise have been successfully tested in older adults but not much is known about the potential of the sled-push exercise in this population, a modality that has been highly used among athletes to improve cardiorespiratory fitness, muscle strength and endurance, and core stability. PURPOSE: The …

The Impact And Outcomes Of Sustainable Intensification Initiatives In Six Countries On Women, Men, And Other Social Groups: A Literature Review, Katherine A. Snyder, Emanuel Sulle

Faculty of Arts & Sciences, East Africa

This study reviewed over 160 papers and reports in sustainable intensification, with a focus on the target countries of Malawi, Ghana, Ethiopia, Laos, Bangladesh and Nepal. It collected literature by carrying out searched with both scopus and google scholar with specific key words and combinations. This search focused on target regions and countries as well as social equity. Under “sustainable intensification”, we obtained a list of 5493 papers. Sustainable intensification and gender yielded 58, SI in Sub-Saharan Africa produced 545. Country by country the papers were fewer and when gender and social equity were included, the number of papers were …

Ubiquitous Microplastics In The Upper Gastrointestinal Tracts Of Florida Coastal Seabirds, Jonathan J. Clark, Dorothy-Ellen A. Renegar, Dave Kerstetter

Marine & Environmental Sciences Faculty Articles

Plastic pollution is increasingly recognized as a global problem. In particular, plastic pieces <5 mm in size (‘microplastics’) are of interest due to their prevalence and association with harmful, persistent organic pollutants (POPs). Very little is known about the prevalence of microplastics in coastal birds. Yet, these water-associated birds are at a high risk of ingesting microplastics that accumulate near the water’s surface. This study describes the microplastics found in the proventriculus and ventriculus of four species of coastal birds regarding quantity, size, type (fiber or fragment), and color (light, mid, or dark). A total of 643 microplastic particles were identified, with 43 of the 44 study specimens containing microplastics (97.7% frequency). The ‘fiber’ type and the ‘mid’ color were the most common microplastics. There were no significant differences between species for particle sizes, but Brown Pelicans contained significantly more particles than the other three species. These results highlight the prevalence of plastic pollution in medium-sized seabirds, but more work is needed to determine microplastic patterns between taxa and foraging environments.