Life Sciences Commons^™

An Investigation Into The Roles Of Aldose Reductase And Acetate Kinase In The Metabolism Of Entamoeba Histolytica, Matthew B. Angel

All Dissertations

Entamoeba histolytica is an amoebic parasite that infects an estimated 90 million people worldwide and causes approximately 100,000 deaths per year. As the causative agent of amoebic dysentery, this food- and water-borne pathogen represents a significant public health burden worldwide, particularly in areas with poor sanitation. While treatments for amoebiasis exist, they are often limited in their effectiveness. Thus, efforts to better understand the biology and physiology of this organism are vital to the development of novel treatments for this disease.

E. histolytica lacks the enzymes for many common metabolic pathways such as the citric acid cycle and oxidative phosphorylation …

Evaluation Of Kappa Opioid Receptor Specific Compounds And Their Effect On Ptsd-Like Behavioral Activity, Daniel Murnock

Theses, Dissertations and Culminating Projects

Background: Post-traumatic stress disorder (PTSD) is a complex and multifaceted neurological disorder that is characterized by intrusive thoughts, avoidance behaviors, alterations in cognition and mood, and alterations in arousal and reactivity. Current studies utilize stress paradigms to mimic behavioral symptoms and neurobiological changes associated with PTSD. The project aims to instead utilize the kappa opioid system and three distinct Kappa Opioid Receptorspecific compounds (Salvinorin A, U50,488, and nor-BNI) to induce these changes. Pharmacokinetic analysis of Salvinorin A and U50,488 revealed a time of peak plasma concentration (Tmax) of 0.25 hours in both groups. 3-Chamber Social Novelty testing revealed a significant …

Characterizing The Expression Pattern And Function Of Tartan During Drosophila Development, Alaina Baggett

Biomedical Engineering Undergraduate Honors Theses

The development of complex structures and organs by multicellular organisms relies on the ability of epithelial cells to self-organize. Epithelia are sheets of connected cells, and compartment boundaries are formed between certain epithelial cells to create distinct tissue compartments. Compartment boundaries are specialized cell-cell interfaces that are enriched for the cytoskeletal proteins actin and myosin, leading to straight cell edges under relatively high tension that act as fences keep cells from moving between compartments. In the model organism Drosophila melanogaster (fruit fly), compartment boundaries in the early embryo are established in response to the non-uniform striped expression of the cell-surface …

Novel And Extendable Genotyping System For Human Respiratory Syncytial Virus Based On Whole-Genome Sequence Analysis, Jiani Chen, Xueting Qiu, Vasanthi Avadhanula, Samuel S Shepard, Do-Kyun Kim, James Hixson, Pedro A Piedra, Justin Bahl

Faculty, Staff and Student Publications

BACKGROUND: Human respiratory syncytial virus (RSV) is one of the leading causes of respiratory infections, especially in infants and young children. Previous RSV sequencing studies have primarily focused on partial sequencing of G gene (200-300 nucleotides) for genotype characterization or diagnostics. However, the genotype assignment with G gene has not recapitulated the phylogenetic signal of other genes, and there is no consensus on RSV genotype definition.

METHODS: We conducted maximum likelihood phylogenetic analysis with 10 RSV individual genes and whole-genome sequence (WGS) that are published in GenBank. RSV genotypes were determined by using phylogenetic analysis and pair-wise node distances.

RESULTS: …

Feeding Preference Of The Sea Urchin Arbacia Punctulata For Algal Turf Over Kelp In A Degraded Kelp Forest Ecosystem, Kenneth J. Hamel

Theses, Dissertations and Culminating Projects

Increasingly severe ocean warming and marine heatwave events are driving declines in habitat-forming kelps worldwide. Direct mortality from extreme temperatures, coupled with destabilization of kelp forest communities, commonly trigger ecological community shifts from dominant kelp forests to an algal turf dominated state. Opportunistic algal turf species are more resilient to warming and lack the fundamental structure of kelp forests, and thus reduce ecosystem services and biodiversity. Once in place, algal turf communities contain ecological feedback mechanisms, diminishing kelp recruitment, and potential recovery. The various feedback mechanisms and ecological thresholds that maintain or drive community shifts between kelp forest and algal …

Possible Surf And Turf Mutualism: The Potential Of Yeast Grown From Maine Wood As Feed For Atlantic Salmon, Gina Scott

All Theses And Dissertations

With fed aquaculture expanding, challenges are being faced with increasing demands for protein for feed. Fishmeal as a protein is at high cost and low supply, and meals from terrestrial agriculture can impact fish health; both also generate environmental challenges. One potential alternative protein is yeast, which can be grown using waste softwood. Simultaneously, Maine forestry has lost buyers of waste wood with several paper mill closures. If yeast is produced as an alternative protein for fish feed using this wood, both Maine Atlantic salmon farming, Maine’s most valuable form of aquaculture, and Maine forestry could benefit. Environmental impact and …

A Biological Condition Gradient For Coral Reefs In The Us Caribbean Territories: Part I. Coral Narrative Rules, Deborah Santavy, Susan K. Jackson, Benjamin Jessup, Jeroen Gerritsen, Caroline Rogers, William S. Fisher, Ernesto Weil, Alina Szmant, David Cuevas-Miranda, Brian K. Walker, Christopher Jeffrey, Patricia Bradley, David Ballantine, Loretta Roberson, Hector Ruiz-Torres, Brandi Todd, Tyler Smith, Randy Clark, Ernesto Diaz, Jorge Bauzá-Ortega, Christina Horstmann, Sandy Raimondo

Marine & Environmental Sciences Faculty Articles

As coral reef condition and sustainability continue to decline worldwide, losses of critical habitat and their ecosystem services have generated an urgency to understand and communicate reef response to management actions, environmental contamination, and natural disasters. Increasingly, coral reef protection and restoration programs emphasize the need for robust assessment tools for protecting high-quality waters and establishing conservation goals. Of equal importance is the need to communicate assessment results to stakeholders, beneficiaries, and the public so that environmental consequences of decisions are understood. The Biological Condition (BCG) model provides a structure to evaluate the condition of a coral reef in increments …

Evaluation Of Triple Negative Breast Cancer Tumor Matrix, Alejandra Ham

Honors Capstones

No abstract provided.

Examining The Relationship Between Health-Related Fitness And Motor Competence In College-Aged Students, Michael Crick

Honors Capstones

No abstract provided.

The Impact Of Dance On Physical, Intellectual, And Social Aspects Of College Life, Jenna Jean Hensen

Undergraduate Honors Thesis Collection

This study aimed to examine the physical, intellectual, and social impacts of dance on collegiate life. Members of the Butler University Dance Team were surveyed, and 3 members were interviewed in order to gain insight into how they perceived dance has impacted various aspects of their college life. Results showed that increased physical activity levels, academic motivation from teammates and coaching staff, as well as a positive relationship with teammates were positive aspects that dance team participants added to their college experience. Negatively, results showed lack of time for proper warm up, intense time commitments, and pressure to maintain a …

Investigation Into The Responses Of Physcomitrella Patens To Herbivory And The Influence Of Light On The Production Of Defense Compounds, Matthew Morris

Undergraduate Honors Thesis Collection

Plant defense mechanisms are well studied in many agriculturally relevant crops such as corn and tomatoes. Though less studied, the more ancestral nonvascular plants may be able to provide insights into the origin and working of modern plant defense systems. In this study, the bryophyte Physcomitrella patens was researched and the role of the jasmonic acid pathway in response to herbivory was investigated. Additionally, the impact of light intensity on the efficacy of this pathway was to be determined. After exposing the moss to various chemical elicitors and mechanical wounding, the activity of proteins produced in the JA pathway was …

Analysis Of Indianapolis Waterways For Evidence Of Eutrophication And Contamination Induced By Urban Pollution, Kiley Grace Wardwell

Undergraduate Honors Thesis Collection

The focus of my research will be largely focused on the water quality of the White River throughout Indianapolis. I will be testing water samples from five different points along the White River to analyze three of its contents, assessing the differing levels of pollution along different points progressing down the river and through the city. The locations I have chosen to test coincide with water gauge sites along the White River and are as follows: Logan Street in Noblesville, 82nd Street, Broad Ripple Dam, Michigan Road and Raymond Street. The surface water at these five locations will be tested …

Agricultural Practices And Nitrogen Cycling Microbes: The Impact Of Sustainable Farming Practices On Nutrient Movement In Indianapolis Urban Farms, Margaret Davis

Undergraduate Honors Thesis Collection

As population movement to urban centers and decreased availability of fresh foods becomes more common, the prevalence of food deserts is becoming far greater. Urban farming can potentially help address these issues by bringing healthy and fresh food sources directly to these areas that lack access to quality food. Urban farming is reliant on the implementation of sustainable practices, like the use of cover crops, to increase the amount of nutrients that are accessible to plants from the soil. Nitrogen is a vital nutrient but cannot be readily produced by plants, so it must be obtained by either an external …

Size Regulation Within The Germline Of The Developing Egg Chamber, Zoe Gladd Herdman

Undergraduate Honors Thesis Collection

The relationship between the size of a cell and the size of its intracellular structures must be precisely regulated for proper development and functioning of the mature organism; however, the mechanisms that establish and maintain this relationship are not known. Much of the work on organelle size scaling has focused on individual cells or organelles, with some looking at how size scaling is maintained during development. However, it is not known whether the size of multiple organelles is coordinately regulated, and how cell size and organelle size are regulated within a syncytium or group of connected cells. Because many cell …

An Investigation Of Factors Affecting The Rooting Ability Of Hardwood Muscadine Cuttings And Genetic Diversity Of Wild And Cultivated Muscadine Grapes (Vitis Rotundifolia Michx.), Kenneth Buck

Graduate Theses and Dissertations

The muscadine (Vitis rotundifolia syn. Muscadinia rotundifolia) is a grape species native to the southeastern United States. Muscadines are one of three grape species in subgenus Muscadinia with a chromosome number of 2n=40 (V. rotundifolia, V. munsoniana, and V. popenoei), making them genetically distinct from the European wine and table grape (Vitis vinifera) and other species in subgenus Euvitis. Rooting hardwood cuttings from muscadine vines has traditionally been considered an exceptionally difficult task. Many previous studies observed almost no root formation, leading to a general consensus that muscadines should either be propagated by softwood cuttings or vegetative layering. However, the …

Oystershell Scale: An Invasive Threat To Aspen Conservation, Amanda M. Grady, Connor D. Crouch, Nicholas P. Wilhelmi, Richard W. Hofstetter, Kristen M. Waring

Aspen Bibliography

Aspen decline is an acute and chronic problem in Arizona, where high levels of overstory mortality and a lack of recruitment continue to be observed. Oystershell scale (Lepidosaphes ulmi; OSS), an invasive sapsucking insect, has recently become widespread in native aspen stands in the southwestern U.S., further contributing to aspen mortality. Damage is severe in lower elevation stands and within ungulate exclosures created to conserve aspen. Young recruiting aspen that are rare on the landscape incur high levels of OSS-caused mortality when infested (Fig. 1). OSS has only recently become a pest of concern in the Southwest and …

Extracellular Vesicles Released After Cranial Radiation: An Insight Into An Early Mechanism Of Brain Injury., Suriyan Sukati, Jenni Ho, Luksana Chaiswing, Pradoldej Sompol, Harshul Pandit, Wendy Wei, Tadahide Izumi, Quan Chen, Heidi Weiss, Teresa Noel, Subbarao Bondada, D Allan Butterfield, Daret K St Clair

Microbiology, Immunology, and Molecular Genetics Faculty Publications

Cranial radiation is important for treating both primary brain tumors and brain metastases. A potential delayed side effect of cranial radiation is neurocognitive function decline. Early detection of CNS injury might prevent further neuronal damage. Extracellular vesicles (EVs) have emerged as a potential diagnostic tool because of their unique membranous characteristics and cargos. We investigated whether EVs can be an early indicator of CNS injury by giving C57BJ/6 mice 10 Gy cranial IR. EVs were isolated from sera to quantify: 1) number of EVs using nanoparticle tracking analysis (NTA); 2) Glial fibrillary acidic protein (GFAP), an astrocyte marker; and 3) …

Studying Acetylation Of Aconitase Isozymes By Genetic Code Expansion, Jessica Araujo

Graduate Theses and Dissertations

The tricarboxylic acid (TCA) cycle is a very important, centrally located, energy-producing pathway that connects numerous other metabolic and regulatory pathways. Enzymes of this cycle have been more recently implicated in various cancers and neurometabolic disorders, however, the exact mechanism by which this happens becomes quite complex when considering the potential modification of these enzymes and the presence of multiple forms of the enzymes and therefore there is much to be studied in this area.

Aconitase has become a recent enzyme of interest as its substrate, citrate, has been found to play a major role in many vital processes within …

Economic Viability Of Weed Management Strategies In High-Tunnel Tomato, Gracie Morrison

Crop, Soil and Environmental Sciences Undergraduate Honors Theses

Cost-effective weed suppression is an important consideration for tomato growers. Growers often choose methods which minimize hand labor, as hand weeding can be prohibitively expensive. This project determined economic viability of high tunnel tomatoes treated with several methods of weed control, both organic and chemical. These methods included: 2-week hand weeding, 1-week hand weeding, preemergent, straw, landscape fabric, and untreated weedy control plots. These treatments were applied to randomized blocks in a high-tunnel. Weeding, planting, and harvest were all timed to determine labor and material costs of weed management strategy implementation. After harvest, marketable yield was weighed to determine revenue. …

Comparison Of Carbon Footprints Of School Lunches In Dangriga, Belize, And Northwest Arkansas, Lauren Greenwood

Crop, Soil and Environmental Sciences Undergraduate Honors Theses

The original purpose of this study was to investigate differences in carbon footprints of school lunches by comparing a school in Arkansas, USA, and a school in Belize. Due to complications imposed by the COVID-19 pandemic, the purpose was revised to gathering preliminary data about the school lunch program at a school in Northwest Arkansas; data were to be used to estimate CO2-equivalent emissions for cafeteria energy use, meal ingredients from the two most popular meals served, and food transportation at the last point in the supply chain (food service delivery to school). This study highlights the intersection of food …

Consumer Preferences For Lab Grown Meat: The Effect Of Information On Consumer Choice, Aryn Blumenberg

Food Science Undergraduate Honors Theses

Global population growth and increased meat demand present challenges for the agricultural industry to produce meat sustainably. In-vitro meat (IVM) is an alternative that could reduce negative impacts associated with livestock production. The goal of this study was to examine consumers’ preferences for IVM. A choice experiment was created with twelve choice tasks that varied across five attributes: production method (IVM or conventional), carbon trust label, organic label, animal welfare label, and price. 1,120 US consumers were randomly assigned to one of four information treatments, differing by information presented regarding IVM: 1) neutral (baseline), 2) positive, 3) negative, and 4) …

Using Community Science To Assess The Effect Of Wing Pattern And Weather On Butterfly Behavior, Abbigail Merrill

Animal Science Undergraduate Honors Theses

Signaling in insects is used as communication and for attraction of mates. The physical appearance of the insect as well as conditions such as weather can play a role in visual signaling, by influencing the wavelengths of light available, and subsequent signal detection. We do not know, however, whether signals butterflies present broadly correlate with how they behave. In this study, we looked at the wing patterns and behavior of butterflies in Northwest Arkansas over a 3.5-year period to assess the relationship between wing pattern, weather, and behavior. We used observational data collected by hundreds of University of Arkansas students …

Effects Of Cottonseed Meal Containing Gossypol On Testis Physiology In Boars, Kristin Ryan

Animal Science Undergraduate Honors Theses

Feral hogs are an invasive species found in 35 U.S. states without an effective control method to limit their population growth. According to a 2019 survey of 467 landowners in Arkansas, feral hogs caused an estimated $12 million in damages (Cook, 2019). While there are current control methods such as hunting and trapping, 65% of the feral hog population must be eliminated in a specific area to prohibit population growth (Cook, 2019). It is theorized that gossypol, a phenolic compound known to negatively impact reproductive function in other species, could cause sterility in boars. In this preliminary research study, 21 …

Targeting Prosthetic Joint Infections Using Modified Egcg Derivatives With Antibiotics, Kavneet Chahil

Theses, Dissertations and Culminating Projects

Prosthetic joint implantations have revolutionized orthopedic medicine by allowing individuals to regain physical function with minimal side effects. However, they are susceptible to post- surgical complications due to bacterial infections. Three significant bacteria that are responsible for the development of joint infections include Staphylococcus epidermidis, Staphylococcus aureus, and Pseudomonas aeruginosa, which act by adhering to the prosthesis and form biofilms thus becoming antibiotic-resistant. It has been reported that green tea polyphenols, which are extracted from the leaves of the Camellia sinensis plant, have antibacterial, antioxidant, and anti- inflammatory properties. The purified, and modified epigallocatechin-3-gallate-stearate (EGCGS) and palmitoyl-epigallocatechin-3-gallate (P-EGCG) are more …

Assessment Of The Asexual Reproductive Strategies Of The Invasive Clinging Jellyfish Gonionemus Vertens, Valin Jarred Booker

Theses, Dissertations and Culminating Projects

Anthropogenic activities are dispersing organisms at higher rates and this dispersal leads to organisms having a higher chance at becoming invasive. The Clinging Jellyfish, Gonionemus vertens, was originally from the north Pacific Ocean, but was identified in New Jersey’s coastal waters in 2016. G. vertens undergo a complex life history with an asexual polyp stage and the sexual medusa stage. Little is known about their polyp stage, which shows multiple asexual reproductive strategies that can generate high densities of medusa. Asexual reproduction of polyps was observed in 2020 to assess the rate of clonal production. Cultured polyps can have several …

Cas9 Grna And Homologous Recombinant Plasmid Integrate Inducible Ha-N-Icer In The Aavs1 Locus Of Sk-Mel-24 Cells, Douglas Job

Theses, Dissertations and Culminating Projects

Melanoma is one of the most aggressive forms of cancer and is prone to metastasis. Once melanoma metastasizes, it is difficult to treat as patients often become immune to MAPK inhibitors and other therapeutic agents. Small molecules, such as immune checkpoint inhibitors, have demonstrated success as an adjunct to melanoma treatment. As a small, 18kDa molecule with tumor suppressing properties, research using ICER continues to provide positive anti-tumor effects. ICER regulates cAMP-induced transcription as a powerful, dominant-negative transcriptional repressor. Recent research demonstrated that the fusion tag hemagglutinin (HA), when fused to ICER’s N-terminus, increased ICER’s half-life and apoptotic activity in …

Turning Tadpoles: Effects Of Salinity And Lateralization On Hyla Versicolor Escape Behaviors, Victor Lopiccolo

Theses, Dissertations and Culminating Projects

Road salt, which is used as a roadway deicer in the winter time, is a major contributor to the salinization of freshwater habitats. Amphibians are particularly vulnerable to the salinization of aquatic environments due to the reliance of many species on pond, lake, and stream habitat in their aquatic larval stage. This study examined how Northern Gray Treefrog (Hyla versicolor) tadpole behavior is affected by salinity in a multiple t-maze. Alternate turning is sequential turning in opposite directions. Alternating turns lead the animal further from the starting point, and are innate behaviors associated with foraging, exploration, and escape. A multiple …

Spatial Distribution And Recruitment Of The Botrylloides Violaceus And Botryllus Schlosseri Tunicates In Barnegat Bay, New Jersey, Kaitlyn Maguire

Theses, Dissertations and Culminating Projects

Botrylloides violaceus and Botryllus schlosseri, colonial ascidians, are known invasive species of the North American Atlantic coast. The tunicates take residence and grow on native eelgrass (Zostera marina) blades, potentially negatively affecting eelgrass growth rate by means of smothering which reduces the plants ability to photosynthesize. Zostera marina is an important habitat, food source, and an indicator of environmental health. Invasive tunicates can decrease the amount of light that eelgrass receives which in turn, decreases the rate of growth of eelgrass. In the summer months of 2021, the relationship and abundance between the invasive tunicates B. schlosseri and B. violaceus …

Green Tea Polyphenols Egcg-S And P-Egcg Containing Formulations Effectively Inhibit Growth And Biofilm Formation Of Eskape Bacteria, Calvin William Taylor

Theses, Dissertations and Culminating Projects

The field of medical microbiology has prospered for decades, finding treatments and cures for a multitude of bacterial infections. While success has been found in certain areas, challenges have arisen along the way. One of those challenges being the group of bacteria known as ESKAPE. The ESKAPE bacteria (Enterococcus faecium, Staphylococcus aureus, Klebsiella pneumoniae, Acinetobacter baumannii, Pseudomonas aeruginosa, and Enterobacter species) have developed their multidrug resistance through adaptation to excessive drug use or prescription, unnecessary antimicrobial utilization, and substandard pharmaceuticals. They are the major cause of nosocomial infections throughout the world. With the ever-growing concern of antibiotic resistance in treating …

Evaluation Of Ranavirus Major Capsid Protein Gene Sequence Mutations In United States East Coast Frog And Tadpole Populations, Erin Marie Tyll

Theses, Dissertations and Culminating Projects

Infectious disease is a leading cause of death in ectothermic taxa including amphibians, reptiles, and bony fish. Frog Virus 3 (FV3) Ranavirus is a prominent pathogen that infects frog and tadpole populations with lethal consequences, especially for pre-metamorphosed individuals. Wood frogs (Lithobates sylvaticus) are particularly susceptible to FV3 infection and mortality events. Conservation of this animal is a critical effort for the maintenance of these ecologically significant animals. Amphibians contribute to the regulation of insect pest levels, energy transfer between aquatic and terrestrial habitats, algae community productivity and function, and vertebrate biomass. Understanding genetic variations of FV3 is crucial to …