Life Sciences Commons^™

Distribution Patterns And Factors Influencing Relative Abundance Of The Alligator Snapping Turtle (Macrochelys Temminckii) In Mississippi, Luke Pearson, Lucas Haralson, Gabrielle Berry, Grover J. Brown, Carl Qualls

Research, Publications & Creative Work

Macrochelys temminckii (Alligator Snapping Turtle) was recently proposed as a threatened species under the US Endangered Species Act due to current and projected future declining populations range wide. Despite a presumed statewide distribution in Mississippi, the Alligator Snapping Turtle had been documented in only 32 of 82 counties between 1857 and 2012, thus leaving a substantial gap in our knowledge of this species’ distribution. Therefore, we collected credible records from museums, literature, and the general public, as well as directly assessed the current distribution and relative abundance of the Alligator Snapping Turtle in all major river systems (i.e., Pascagoula, Pearl, …

Gross Ecosystem Product Accounting Of A Globally Important Agricultural Heritage System: The Longxian Rice–Fish Symbiotic System, Jianfang Liu, Qian Zhang, Qianyi Wang, Yaoping Lv, Yingqi Tang

Research, Publications & Creative Work

The Rice–Fish Symbiotic System in the Longxian village is the first Globally Important Agricultural Heritage System (GIAHS) in Asia. This paper examined the value transformation mechanism of the Longxian Rice–Fish Symbiotic System from the micro perspective of material cycle and energy flow and quantified its economic value using the gross ecosystem product (GEP). Using the InVEST model and ArcGIS tools, the GEP was estimated to be approximately CNY 116.51 million (approx. CNY 252,624 per hectare per year). The ecosystem regulating service value occupied more than 80% of the GEP. Within the regulating ecosystem services, the climate regulation value was the …

Carbohydrates And Endurance Exercise: A Narrative Review Of A Food First Approach, Alireza Naderi, Nathan Gobbi, Ajmol Ali, Erfan Berjisian, Amin Hamidvand, Scott C. Forbes, Majid S. Koozehchian, Raci Karayigit, Bryan Saunders

Research, Publications & Creative Work

Carbohydrate (CHO) supplements such as bars, gels, drinks and powders have become ubiquitous as effective evidence-based CHO sources that improve endurance exercise performance. However, athletes are increasingly turning to more cost-effective ‘food-first’ approaches for CHO ingestion to improve exercise performance. Mixed CHO foods including cooked lentils, oats, honey, raisins, rice, and potatoes are all effective pre-exercise CHO food sources. Caution is advised when selecting some of these foods as a primary CHO source, as some athletes may be prone to gastrointestinal discomfort—especially regarding those foods where the quantities required for recommended CHO intake may be voluminous (e.g., potatoes). Palatability may …

Physical Activity And The Link Among Stress, Burnout, And Well-Being In Athletic Trainers, Christine E. Pacewicz, Taylor W. Rowley, Jennifer L. Savage

Research, Publications & Creative Work

Stress is a leading cause of burnout in working professionals, including athletic trainers (ATs). One consequence of burnout for ATs is lower perceptions of well-being, which have implications for mental and physical health. Physical activity is known to help reduce stress. Thus, activity may help reduce stress and burnout in ATs while enhancing well-being.

Climate Change Is Leading To Rapid Shifts In Seasonality In The Himalaya, Tenzing Ingty, Angela Erb, Xiaoyang Zhang, Crystal Schaaf, Kamaljit S. Bawa

Research, Publications & Creative Work

Climate change has significantly impacted vegetation phenology across the globe. The general consensus is that the Earth’s vegetation has experienced an advance in the spring phases and a delay in senescence. However, some studies from high latitudes and high elevations have instead shown delayed spring phenology, owing to a lack of chilling fulfillment and altered snow cover and photoperiods. We have used the MODIS satellite-derived view-angle corrected surface reflectance data (MCD43A4) to document the four phenological phases in the high elevations of the Sikkim Himalaya, and compared the phenological trends between below-treeline zones and above-treeline zones. This analysis of remotely …

New Online Approach For Real-Time Precise Point Positioning Gnss Processing, Maha Fekry Elrewiny, Fawzi H. Zarzoura, Mahmoud El-Mewafi

Mansoura Engineering Journal

Real-time precise point positioning (PPP) is a promising technique for accurate position services. The merging of many systems is intended to increase real-time PPP performance. With a rising number of available satellites and progressively increased quality of real-time accurate products of satellite clocks and orbits, Platforms such as CSRS-PPP, AUSPOS, Magic-GNSS, Trimble, and PPP-MANS are reshaping the landscape of embedded solutions in a variety of sectors. the performance of real-time PPP must be tested on a regular basis. This article examines the benefits and drawbacks of real-time PPP, emphasizing its potential for high accuracy, fast decision-making, and easy interaction with …

Comparative Hptlc Study For Simultaneous Determination Of Ivabradine And Metoprolol Using Uv And Fluorescence Detectors, Mohamed Rizk, Shereen Mowaka, Mariam Mohamed, Maha Abou El-Alamin

Pharmacy

New, simple, accurate, sensitive and validated high performance thin layer chromatographic (HPTLC) method coupled with UV absorbance mode and fluorescence (FL) detectors which were used for simultaneous determination of ivabradine (IVA) and metoprolol (MET) in their bulk and pharmaceutical dosage form using TLC silica 60 F254 plates and non-fluorescent TLC silica gel 60 plates. The developing system was chloroform: methanol: formic acid: ammonia (8.5:1.5:0.2:0.1, v/v). Desnitometric analysis in UV absorbance mode was set at λ = 275 nm. While, fluorescence mode was performed with excitation at 260 nm for quantitative simultaneous determination of IVA and MET using optical filter K320. …

Examining The Oxidative Stress Effects In Rats Exposed To 2-Aminoanthracene In Utero And High Fat Diet Three Months After, Brianna A. Lanoix

Honors College Theses

Polycyclic aromatic hydrocarbons are organic compounds that are created synthetically or found in partially burned oil, gasoline, and coal. 2-aminoanthracene (2AA) is a common example of a PAH and can affect lipid and carbohydrate metabolism and resulting in inflammatory problems and oxidative stress. The objective of the research project is to investigate oxidative stress in relation to diabetes in rats exposed to 2AA in utero and a high fat diet later in life. Pregnant dams were separated into treatment groups based on their dosages of 2AA; 0 mg/kg (control), 50 mg/kg (low), 100 mg/kg (high). During the gestation -postpartum period, …

Dfhic: A Dilated Full Convolution Model To Enhance The Resolution Of Hi-C Data, Bin Wang, Kun Liu, Yaohang Li, Jianxin Wang

Computer Science Faculty Publications

Motivation: Hi-C technology has been the most widely used chromosome conformation capture(3C) experiment that measures the frequency of all paired interactions in the entire genome, which is a powerful tool for studying the 3D structure of the genome. The fineness of the constructed genome structure depends on the resolution of Hi-C data. However, due to the fact that high-resolution Hi-C data require deep sequencing and thus high experimental cost, most available Hi-C data are in low-resolution. Hence, it is essential to enhance the quality of Hi-C data by developing the effective computational methods.

Results: In this work, we propose …

Cellbrf: A Feature Selection Method For Single-Cell Clustering Using Cell Balance And Random Forest, Yunpei Xu, Hong-Dong Li, Cui-Xiang Lin, Ruiqing Zheng, Yaohang Li, Jinhui Xu, Jianxin Wang

Computer Science Faculty Publications

Motivation

Single-cell RNA sequencing (scRNA-seq) offers a powerful tool to dissect the complexity of biological tissues through cell sub-population identification in combination with clustering approaches. Feature selection is a critical step for improving the accuracy and interpretability of single-cell clustering. Existing feature selection methods underutilize the discriminatory potential of genes across distinct cell types. We hypothesize that incorporating such information could further boost the performance of single cell clustering. Results

We develop CellBRF, a feature selection method that considers genes’ relevance to cell types for single-cell clustering. The key idea is to identify genes that are most important for discriminating …

A Single-Cell Atlas Of Bovine Skeletal Muscle Reveals Mechanisms Regulating Intramuscular Adipogenesis And Fibrogenesis, Leshan Wang, Peidong Gao, Chaoyang Li, Qianglin Liu, Zeyang Yao, Yuxia Li, Xujia Zhang, Jiangwen Sun, Constantine Simintiras, Matthew Welborn, Kenneth Mcmillin, Stephanie Oprescu, Shihuan Kuang, Xing Fu

Computer Science Faculty Publications

Background

Intramuscular fat (IMF) and intramuscular connective tissue (IMC) are often seen in human myopathies and are central to beef quality. The mechanisms regulating their accumulation remain poorly understood. Here, we explored the possibility of using beef cattle as a novel model for mechanistic studies of intramuscular adipogenesis and fibrogenesis.

Methods

Skeletal muscle single-cell RNAseq was performed on three cattle breeds, including Wagyu (high IMF), Brahman (abundant IMC but scarce IMF), and Wagyu/Brahman cross. Sophisticated bioinformatics analyses, including clustering analysis, gene set enrichment analyses, gene regulatory network construction, RNA velocity, pseudotime analysis, and cell-cell communication analysis, were performed to elucidate …

The Effects Of Prenatal And Perinatal Alcohol Exposure On Adult Mouse Behavior, Ericka Ann Schaeffer

Graduate Research Theses & Dissertations

Prenatal alcohol exposure (PAE) is a prevalent phenomenon conserved across cultures which can result in a heterogeneous set of symptoms associated with offspring development. Although there is much research characterizing the extent of disruptions in spatial and motor performance, there appears to be conflicting results dependent on the type of PAE model. Therefore, the current study aimed to investigate a more reliable and translatable model of symptoms associated with fetal alcohol syndrome disorders. The current set of experiments evaluated the effects of alcohol exposure in mice during prenatal (gestation day 4-18) and early postnatal (postnatal day 4-12) development on organization …

Moving Beyond The Panarchy Heuristic, David G. Angeler, Craig R. Allen

School of Natural Resources: Documents and Reviews

No abstract provided.

Evolution Of The Southwest Drought Learning Network: Collective Response To Exceptional Drought, E. Elias, B. Fuchs, J. Lisonbee, T. Bernadt, V. Martinez, T. Haigh

School of Natural Resources: Documents and Reviews

No abstract provided.

Ancient Bears Provide Insights Into Pleistocene Ice Age Refugia In Southeast Alaska, Flavio Augusto Da Silva Coelho, Stephanie Gill, Crystal M. Tomlin, Marilena Papavassiliou, Sean D. Farley, Joseph A. Cook, Sarah A. Sonsthagen, George K. Sage, Timothy H. Heaton, Sandra L. Talbot, Charlotte Lindqvist

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

During the Late Pleistocene, major parts of North America were periodically covered by ice sheets. However, there are still questions about whether ice-free refugia were present in the Alexander Archipelago along the Southeast (SE) Alaska coast during the last glacial maximum (LGM). Numerous subfossils have been recovered from caves in SE Alaska, including American black (Ursus americanus) and brown (U. arctos) bears, which today are found in the Alexander Archipelago but are genetically distinct from mainland bear populations. Hence, these bear species offer an ideal system to investigate long-term occupation, potential refugial survival and lineage turnover. Here, we present genetic …

Movement And Genomic Methods Reveal Mechanisms Promoting Connectivity In A Declining Shorebird: The Lesser Yellowlegs, K. Christie, R. E. Wilson, J. A. Johnson, C. Friis, C. M. Harwood, L. A. Mcduffie, E. Nol, Sarah A. Sonsthagen

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

No abstract provided.

Fecal Dna Metabarcoding Shows Credible Short-Term Prey Detections And Explains Variation In The Gut Microbiome Of Two Polar Bear Subpopulations, M. Franz, L. Whyte, T. C. Atwood, D. Menning, Sarah A. Sonsthagen, S. L. Talbot, K. L. Laidre, E. Gonzalez, M. A. Mckinney

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

No abstract provided.

Habitat Use By Sandhill Cranes Wintering In The Agricultural Landscape Of The Sacramento–San Joaquin River Delta Of California, Gary L. Ivey, Bruce D. Dugger, Caroline P. Herziger, Michael L. Casazza, Joseph P. Fleskes

Proceedings of the North American Crane Workshop

The Sacramento–San Joaquin Delta region of California is an important wintering region for sympatric greater (Grus canadensis tabida) and lesser (G. c. canadensis) sandhill cranes. Basic information about sandhill crane use of habitats in their winter landscape is needed to design a biologically driven conservation strategy. We monitored a sample of radio-tagged birds of each subspecies for 2 winters and conducted foraging counts to document their habitat use. Cranes used the major crops and habitat types that were available in the landscapes surrounding their roost sites and focused most of their foraging in grain crops. We examined habitat selection surrounding …

Whooping Crane Nesting Behavior, Parental Care, And Ecology At Wood Buffalo National Park, Andrew J. Caven, Michael J. Forsberg

Proceedings of the North American Crane Workshop

We studied Whooping crane (Grus americana) nesting behavior and movement patterns at Wood Buffalo National Park using an instantaneous scan sampling approach. We also photo-documented important behavioral and ecological observations. Data were collected from 2 to 9 June 2023 from before 3:00 to after 22:00 hours. We completed 88 hours of observation and documented nest swapping about every 3.2 hours. The female incubated/brooded 3.3-10.9% more than the male, and the probability of incubation/brooding declined by 49% after the second chick began pipping and by 99% after both chicks had hatched. The eldest chick was successfully provisioned 16 hours and 33 …

Inland Habitat Selection Model For Wintering Whooping Cranes, Karen Tyrell, Kristin Brightwell, Matthew Crane, Wade Harrell, Rosa Palmer, Aaron T. Pearse, Ted Owen

Proceedings of the North American Crane Workshop

Inland habitat use by wintering Aransas-Wood Buffalo whooping cranes (Grus americana) is expected to increase given projected population growth and observations of some whooping cranes using inland winter habitat in addition to coastal marshes. We developed resource utilization functions using ‘random forests’ to model whooping crane use as a function of environmental covariates considered important for whooping crane use. Covariates associated with distance to cropland, distance to development, and wetness or standing water were the most influential in model prediction. The model estimated that the 50% predicted use contour encompassed 34,925 hectares (ha) and the 95% predicted use contour encompassed …

Mortality Of Fledged Whooping Cranes In The Aransas-Wood Buffalo Population, Kristin Brightwell, Matt Rabbe, Aaron T. Pearse, Ben Bainbridge, Karen Tyrell, Clayton Derby

Proceedings of the North American Crane Workshop

Maintaining accurate mortality records for endangered species is important for guiding management and conservation actions. Mortalities of whooping cranes (Grus americana) in the Aransas-Wood Buffalo Population (AWBP) are documented in published records from 1950 through 2010. This paper documents publicly available records of known mortalities from 2011 through 2023, and updates historic records from 1950 to 2010. Public sightings and telemetry carcass records were restricted to fledged whooping cranes from the AWBP and stratified by confirmed, suspected, and unknown causes across the annual range (i.e., summer, migration, and winter). This mortality update provides more certainty associated with available carcass data …

Differential Habitat Use Of Wintering Whooping Cranes Throughout The Range Of The Eastern Migratory Population, Hillary L. Thompson, Anne E. Lacy, Robert F. Baldwin, Patrick G. R. Jodice

Proceedings of the North American Crane Workshop

In 2001, a reintroduced population of whooping cranes (Grus americana), the Eastern Migratory Population (EMP), was established in the eastern United States. There has been no assessment of habitat use of the EMP across the current winter distribution. During 2 winters, we used radio-telemetry to track groups of cranes each for 1 day. We grouped sites into 3 regions, based on natural clustering: north (Illinois, Indiana, Kentucky), central (Tennessee, Alabama), and south (Georgia, Florida, Louisiana). Home ranges decreased in size from north to south (4.9 ± 2.8, 3.1 ± 1.0, and 2.3 ± 0.5 km2, respectively). In the north and …

Comparisons Of Migration Patterns Between Parent-Reared And Costume-Reared Whooping Cranes In The Eastern Migratory Population, 2012–2023, Mary Anderson, Glenn H. Olsen, Susie Dunham, Hillary L. Thompson, Marianne M. Wellington

Proceedings of the North American Crane Workshop

Whooping cranes (Grus americana) have been raised and released into the Eastern Migratory Population (EMP) since 2001. Cranes either were costume-reared and learned their migration route by following an ultralight aircraft, were costume-reared and released in fall near adult cranes (known as direct autumn release), or were parent-reared by captive adult whooping crane pairs and released in the fall near adult whooping cranes. Compared to costume-rearing, parent-rearing encourages conspecific learning prior to release, but needs further research to understand how it may influence post-release behaviors including migration. This study compared the migratory timing and length of parent-reared whooping cranes and …

Temporal Patterns Of Sandhill Crane Use Of The Pecos River Valley, Chaves County, New Mexico, James B. Montgomery Jr.

Proceedings of the North American Crane Workshop

The Pecos River Valley is an important stopover area for both migrating and wintering sandhill cranes (Grus canadensis) in southeastern New Mexico. The combination of shallow impoundments and a playa lake at Bitter Lake National Wildlife Refuge, off-refuge shallow ponds and riverine wetlands, and approximately 20,000 ha of nearby irrigated farmlands in Chaves County provided roosting and foraging areas used by the cranes. Once per week sandhill cranes were counted when departing their roosts during September through April 2005–2024. The fall migration during October and November peaked at 24,431 ± 204 (SE). During this peak period, cranes divided foraging between …

Movement Of Eastern Migratory Whooping Cranes Outside The Nonessential Experimental Population Range, 2002–2024, Nicole M. Gordon, Eleanor A. Laack, Hannah R. Macinnes, Alicia M. Ward, Hillary L. Thompson

Proceedings of the North American Crane Workshop

Whooping cranes (Grus americana) are listed as an endangered species under the Endangered Species Act (ESA), with 1 historic migratory population and multiple reintroduced populations. The reintroduced populations, including the Eastern Migratory Population (EMP), are considered nonessential experimental populations (NEP) under section 10j of the ESA. Within the boundaries of the NEP range, whooping cranes are treated with the protection of a threatened species on federal lands but are treated as a species under consideration for listing on private lands. However, if an individual exits the NEP range, they are treated as federally endangered and have the full protections of …

Proceedings Of The Sixteenth North American Crane Workshop: Abstracts, Megan E. Brown, Barry K. Hartup, Jane E. Austin

Proceedings of the North American Crane Workshop

Following is a list of all abstracts of presentations given at the 16th North American Crane Workshop (2023), some of which were not published in these Proceedings.

Proceedings Of The Sixteenth North American Crane Workshop, 23–26 October 2023, Baraboo, Wisconsin, Cover And Frontmatter, Megan E. Brown, Barry K. Hartup, Jane E. Austin

Proceedings of the North American Crane Workshop

Cover and frontmatter for the Proceedings of the Sixteenth North American Crane Workshop held October 23–26, 2023 in Baraboo, Wisconsin. Includes the preface by the editors, in memoria for M. Cathy Nowak (1955–2023) and Geroge F. Gee (1937–2022), and the contents.

Nebraska Seed Focus, September 2023, Nebraska Crop Improvement Association

Nebraska Seed Focus

Nebraska Seed Focus, September 2023

Nebraska Seed Focus, December 2023, Nebraska Crop Improvement Association

Nebraska Seed Focus

Nebraska Seed Focus, December 2023

Nebraska Seed Focus, March 2023, Nebraska Crop Improvement Association

Nebraska Seed Focus

Nebraska Seed Focus, March 2023