Life Sciences Commons^™

Potential Toxic Elements And Their Carcinogenic And Non-Carcinogenic Risk Assessment In Some Commercially Important Fish Species From A Ramsar Site, Mohammad Belal Hossain, Md Moudud Ahmed, Yeasmin Nahar Jolly, As-Ad Ujjaman Nur, Salma Sultana, Jimmy Yu, Takaomi Arai

Faculty, Staff and Student Publications

Potentially toxic elements (PTEs) such as Hg, As, and Pb have become concentrated in the aquatic ecosystem as a result of increased human activities. However, these substances frequently have synergistic or antagonistic effects on the human body or other animals. As a result, there are concerns world-wide that commercially available food products, especially fish, may be contaminated with hazardous elements. In this study, samples of four selected fishes, Gutum (Lepidocephalichthys guntea), Baim (Macrognathus pancalus), Baila (Glossogobius giuris), Meni (Nandus nandus) were analyzed from one of the largest freshwater wetlands (designed as a …

Agricultural Irrigated Land And Irrigation Water Use In Utah, Burdette Barker, Matt Yost, Cody Zesiger

All Current Publications

Utah is considered the second driest state in the United States. As a result, much of the agriculture and horticulture in Utah depends upon irrigation. Irrigation is an important feature of agriculture in Utah. The distribution of irrigated and water use varies across the state, based on water availability, topography, and soils. In recent years, sprinkler irrigation has overtaken surface methods as the dominant irrigation method, based on irrigated area, in Utah. About 75% to 80% of water withdrawals in Utah are for irrigation, with about 68% of that water being consumptive use. Alfalfa, other hay crops, and pasture are …

Missing Value Imputation For Single Omics And Multi-Omics Data, Meng Song

Dissertations

The integration analyses of multi-omics data have the advantages of extending our understanding of biological system across multiple omics layers, unraveling the functional mechanism of complex disease development, and refining the discovery of novel drug targets. However, multi-omics studies often face challenges such as data heterogeneity, missing values problem, interpretability, and imbalance classes. Among these challenges, the missing values problem is a critical issue for large cohort studies as not all samples will get a complete measurement for all the omics layers. To address the problem of missing values in multi-omics data, I focused on the imputation of completely missing …

Commercial Fishing Identification Guide 2023, Department Of Primary Industries And Regional Development, Western Australia

Fisheries Occasional Publications

Throughout this guide you will see all or some of the marine bioregion symbols with each fish illustration, indicating where the species is most likely to occur.

This guide has been developed to help you identify the more common species in Western Australia you may encounter. The purpose of this guide is to enhance consistent and accurate species identification.

If you are unsure about a particular species (or if it is not in this guide), please discuss it with a representative of the Department of Primary Industries and Regional Development, Western Australia.

Investigating The Costs And Benefits Of A Nutritional Fungal Endosymbiont, Nolan L. Perryman

Biology ETDs

Research on insect symbiosis is dominated by insect–bacteria models, however, the role of fungal symbionts in insects is poorly understood. Fungi are de novo synthesizers of many essential nutrients, therefore, insect–fungal pairings can permit specialization on nutritionally deprived diets. Here, I address the costs and benefits of symbiosis using a system of beetle–fungal symbiosis. Specifically, I ask 1) when reared on a low-quality diet, does the beetle increase the number of viable symbionts to compensate for a heightened nutritional demand, and 2) Is the conferred fitness benefit of the symbiont only present in low-quality diets? When reared on low-quality diets, …

Artificial Intelligence Frameworks To Detect And Investigate The Pathophysiology Of Spaceflight Associated Neuro-Ocular Syndrome (Sans), Joshua Ong, Ethan Waisberg, Mouayad Masalkhi, Sharif Amit Kamran, Kemper Lowry, Nasif Zaman, Alireza Tavakkoli, Andrew G Lee

Faculty, Staff and Student Publications

Spaceflight associated neuro-ocular syndrome (SANS) is a unique phenomenon that has been observed in astronauts who have undergone long-duration spaceflight (LDSF). The syndrome is characterized by distinct imaging and clinical findings including optic disc edema, hyperopic refractive shift, posterior globe flattening, and choroidal folds. SANS serves a large barrier to planetary spaceflight such as a mission to Mars and has been noted by the National Aeronautics and Space Administration (NASA) as a high risk based on its likelihood to occur and its severity to human health and mission performance. While it is a large barrier to future spaceflight, the underlying …

Change In Grassland Science: Implications For Training, Research And Grassland Societies, G. Lemaire, R. J. Wilkins, J. Hodgson

IGC Proceedings (1977-2023)

In most of the world the priority for production-oriented research has been succeeded by the need for grassland research to focus on systems which satisfy requirements relating to the stability and protection of land, water and atmospheric resources and to biodiversity, in addition to production efficiency. This dictates not only a new approach to research, but also new approaches for the organisation of research, the training and development of research scientists and the activities of Grassland Societies and associated organisations.

Citizen Scientists: Efforts By The Tri-Societies To Inject Science Into Us Policymaking, E. Bergfeld, K. Glasener

IGC Proceedings (1977-2023)

The Tri-Societies (American Society of Agronomy, Crop Science Society of America and Soil Science Society of America), the largest life science professional societies in the United States (US) dedicated to the agronomic, crop and soil sciences, encompass approximately 18,000 members globally and include approximately 14,000 certified professionals who are a direct conduit to the farming communities across the US. The Tri-Societies' US-based federal science policy programmes have been active for decades. There is a Washington, DC-based Director of Science Policy, Congressional Science Fellows (CSF) and Science Policy Interns.

Automated Capture And Analysis Of Circulating Tumor Cells In Pediatric, Adolescent And Young Adult Patients With Central Nervous System Tumors, Wafik Zaky, Dristhi Ragoonanan, Izhar Batth, Long Dao, Jian Wang, Najat C Daw, Soumen Khatua, Shulin Li

Faculty, Staff and Student Publications

Tumors of the central nervous system (CNS) are the most common and lethal childhood malignancy. Detection of residual disease and longitudinal monitoring of treatment response in patients are challenging and rely on serial imaging. This current standard of care fails to detect microscopic disease or provide molecular characteristics of residual tumors. As such, there is dire need for minimally invasive liquid biopsy techniques. We have previously shown the high specificity of using cell surface vimentin (CSV) to identify circulating tumor cells (CTCs) from patients bearing various types of cancers. Here, we describe the first report of CTCs captured from peripheral …

The New World Of Rna Diagnostics And Therapeutics, Giovanni Blandino, Roberto Dinami, Marco Marcia, Eleni Anastasiadou, Brid M Ryan, Luigi Fattore, Rosanna Sestito, Rossella Loria, Ana Belén Díaz Méndez, Maria Chiara Cappelletto, Claudio Pulito, Laura Monteonofrio, George A Calin, Gabriella Sozzi, Jit Kong Cheong, Ranit Aharonov, Gennaro Ciliberto

Faculty, Staff and Student Publications

The 5th Workshop IRE on Translational Oncology was held in Rome (Italy) on 27-28 March at the IRCCS Regina Elena National Cancer Institute. This meeting entitled "The New World of RNA diagnostics and therapeutics" highlightes the significant progress in the RNA field made over the last years. Research moved from pure discovery towards the development of diagnostic biomarkers or RNA-base targeted therapies seeking validation in several clinical trials. Non-coding RNAs in particular have been the focus of this workshop due to their unique properties that make them attractive tools for the diagnosis and therapy of cancer.This report collected the presentations …

Analysis Of Biologically Active Secondary Metabolites From Fungi, Elizabeth E. Guevara, Kirk Manfredi

Summer Undergraduate Research Program (SURP) Symposium

Fungi produce secondary metabolites, which are organic compounds that allow the organism to be competitive in their environment. Secondary metabolites are not involved in growth and development, instead they affect ecological interactions to increase survivability. These compounds will often have antimicrobial properties, leading to their use in antibiotics. Isolating a compound with significant antimicrobial activity could lead to its use in therapeutic antibiotics. New antibiotics are needed to address the growing issue of antimicrobial resistant bacteria. This project explores the antimicrobial compounds produced by fungi collected Wind Cave National Park or carried by local insects. Accurate taxonomic identification of the …

Functional Analysis Of Spermidine Synthase (Spds) Using Virus-Induced Gene Silencing In Barley, Ammar A. Shaikh, Tilahun Abebe

Summer Undergraduate Research Program (SURP) Symposium

Polyamines are low molecular weight aliphatic nitrogenous compounds with two or more amino groups (Liu et al., 2015). Polyamines are found in all organisms. They play diverse roles in growth and development as well as environmental stress response. One of the major polyamines in plants is spermidine. Spermidine increases grain filling by increasing hormones and enzymes in sucrose biosynthesis (Luo et al., 2019). Expression of genes in the spermidine biosynthesis pathway increases during drought in barley (Abebe et al., 2010). However, the role of spermidine biosynthesis for drought tolerance has not been systematically investigated in barley. In the past, we …

Analysis Of The Role Of Gamma-Aminobutyrate (Gaba) In Drought Tolerance In Barley Using Virus-Induced Gene Silencing, Thomas Manternach, Tilahun Abebe

Summer Undergraduate Research Program (SURP) Symposium

Gamma-aminobutyric acid (GABA) is a messenger in cellular communication. As GABA is also an enhancer in stress tolerance, this often leads to rapid accumulation during drought. . GABA increases photosynthesis and reduces water loss through the stomata (Li et al., 2021; Xu et al., 2021). The metabolization of GABA occurs via the GABA shunt, which is produced primarily from a glutamic acid catalyzed by glutamate decarboxylase (GAD) in the cytosol. GABA is imported into the mitochondria and subsequently degraded by GABA-transaminase (GABA-T) into succinic semialdehyde (SSA) . In barley, both GABA and GAD genes are induced during drought (Abebe et …

Comparison Of Gut And Leg Pollen Composition In Female Halictus Ligatus With Flower Source, Sriya Kalala, Ai Wen

Summer Undergraduate Research Program (SURP) Symposium

It is commonly believed by bee biologists that wild bees visit one single flower species during each trip to make nest provision. However, the exact foraging behavior is not clear and may vary in different species of bees, and therefore the pollination patterns have continued to be studied. When a bee undergoes the process of pollination, the majority of the pollen consumed by the bee passes through the digestive tract and remains undigested. However, when the pollen is digested and used as an energy source, the pollen grain digestion occurs in the midgut intestine within the bee instead of the …

Iowa’S Agricultural Landscape: Is Tef A Viable Option?, Kyran Hines, Tilahun Abebe

Summer Undergraduate Research Program (SURP) Symposium

Tef (Eragrostis tef Zucc.) Trotter is a significant grain crop in Ethiopia, occupying over 30% of the country's total cultivated land. Tef is known for its long shelf life, drought resistance, natural pest resistance, versatility in food, beverages, and cattle feed. The crop has recently gained popularity in the United States for its nutritional qualities. Tef has a high content of minerals, amino acids, and is also gluten-free. In the context of climate change and the need for sustainable agriculture, exploring alternative crops to ensure food security is crucial. This research focuses on identifying tef accessions that are well-adapted to …

Forming A Comprehensive Pollen Library For The Purpose Of Native Bee Pollen Identification And Analysis, Madeline Roubik, Ai Wen

Summer Undergraduate Research Program (SURP) Symposium

The Iowa prairie is home to many species of bees who collect pollen for nutrition or nesting purposes (Real, 1983). Most bees collect pollen in their scopa, a small pollen collection pouch on their back legs or abdomen. However, the entire bee, including their thorax, can come in contact with pollen. Because of this, it is assumed that a bee’s pollen collection will be more diverse on its thorax where it unintentionally comes into contact with pollen, than its legs where it intentionally collects pollen. In this study, we created a comprehensive pollen library of native Iowa prairie flowers, and …

Investigating Gene Looping In Yeast, Abbie Bangs, Justin Peters

Summer Undergraduate Research Program (SURP) Symposium

Saccharomyces cerevisiae, also known as brewer’s yeast, is the model organism we chose to interrogate a possible length dependence of gene looping. Gene looping occurs when the promoter and the terminator regions of a gene come together in a physical interaction to form a loop. RNA polymerase transcribes the gene at an amplified rate due to the gene loop (Figure 1), but little research exists as to what factors are important for this process, including the mechanics of the underlying DNA.

Assessment Of Dna Concentration And Degradation From Extracted Bumble Bee Thorax Muscle 2023, Joel Lado, Ai Wen, Kenneth Elgersma

Summer Undergraduate Research Program (SURP) Symposium

Deoxyribonucleic acid (DNA) is the foundation of an organism's ability to develop, survive, and reproduce. High genomic DNA is imperative for many scientific studies and applications such as Biotechnology, Genetics, & Pharmaceuticals. The separation of genomic DNA once purified from other cellular components (RNA, protein) can be sequenced to study entire genomes, develop antibodies, and limit genetic mutations.

Although a very stable molecule, DNA is susceptible to degradation under normal cellular conditions to various factors. Hence it is essential to properly extract genetic material from bee specimens, to better understand their population genetics.

DNA often needs to be stored for …

Effectiveness Of Simulation-Based Learning On Clinical Competence In Dietetics Students: A Narrative Review, Claudia W. Scott, Rena Zelig, Diane L. Rigassio Radler

Journal of Dietetic Education

Clinical supervised practice experiences offered through dietetic internships have historically been among the most challenging to obtain. The COVID-19 pandemic heightened the scarcity of these experiences and forced dietetics education programs to offer alternative experiences in the absence of direct patient care opportunities. Simulation-based learning experiences (SBLE) or objective structured clinical examinations (OSCE) are one method of providing these alternative options, and if effective, could be routinely incorporated into dietetics education. This review evaluates five original research articles to determine the effectiveness of simulation-based learning on perceived or observed clinical competence in dietetic students. The findings of the studies unanimously …

Dietetic Students’ Changes In Attitudes After Participating In Online Interprofessional Education, Kelly Jackson, Terri L. Kurz, Mary Marian

Journal of Dietetic Education

Interprofessional education (IPE) is an accreditation requirement and an important component of training for future registered dietitian nutritionists (RDNs) and access to quality IPE is often limited in online programs. An online IPE module was developed to provide dietetics students the opportunity to build collaborative skills with students in other healthcare training programs. A research study was designed to answer the following research question: How and to what extent does participation in an online IPE module impact online dietetics students’ attitudes of interprofessional practice? Participants were dietetics students enrolled in an upper-division online dietetics course. Data gathered included a retrospective …

Undergraduate And Graduate Students’ Retrospective Perception Of Flipped Learning In Dietetics Curricula, Rachel L. Vollmer, Teresa Drake

Journal of Dietetic Education

Most studies investigating flipped learning fail to assess how student perceptions of flipped learning may change once the class is complete, and students have a chance to reflect on the experience. Follow-up studies are needed to evaluate the sustainability of the benefits from flipped learning among students and how they feel it prepares them, if at all, for future classes and/or their professional lives. Therefore, the objective of this study was to explore how graduate and undergraduate dietetics students retrospectively perceive a course that used flipped learning 2 years after they completed the course. Two focus groups with undergraduate (n=5) …

The Impact Of A Graduate-Level Applied Research Course On Graduate-Level Nutrition Students’ Research-Related Perceptions, Attitudes, And Knowledge, Alexandria Caljean, Kaitlyn M. Eck

Journal of Dietetic Education

Nutrition professionals report low levels of research utilization and engagement. This study explored the associations between completion of an applied nutrition research (capstone) course and students’ research-related perceptions, attitudes, and knowledge. Nutrition graduate students at a university in Pennsylvania completed an online survey at the beginning and end of a semester. The survey assessed perceptions of research participation and application, attitudes regarding research, and self-efficacy for conducting research, engaging in evidence-based practice, and collaborating on research. Students in a capstone course (n=17) learned about applying research in the field and conducted a research project. Non-capstone students (n=11) were not in …

A Cross‐Sectional Survey Of Research Involvement And Interest Among Graduate Dietetics Students, Courtney Wedemire, Rebecca Brody, Joachim Sackey, Laura Byham-Gray

Journal of Dietetic Education

Background: Dietitians are not frequently participating in or leading research. Cultivating greater research interest and involvement starts with dietetics education, but little is known about dietetics students’ research involvement and interest. This study examines relationships between research involvement and interest among graduate dietetics students. Methods: This study was a cross-sectional survey design incorporating participant characteristic data, the Practice-Based Dietitian Research Involvement Survey (PBDRIS), and the modified Interest in Research Questionnaire (IRQ) tools; 89 of 327 (27.2%) graduate dietetic students from 3 US universities were included. Participant characteristics, PBDRIS scores, and IRQ scores were analyzed using descriptive statistics. Relationships between variables …

Table Of Contents, Editors' Message, Editorial Board, Diana Cuy Castellanos, M. Elizabeth (Beth) Miller

Journal of Dietetic Education

No abstract provided.

The Role Of Adenovirus Serotype 5 E4 11k In The Relocalization Of The Cellular P Body Proteins, Kasey A. Karen, La`Quita Randolph, Kevin Neubrecht, Heather Vincent

Georgia Journal of Science

Human adenoviruses are a useful tool to understand basic cellular biology in addition to viral infections. Historically, cellular splicing was first discovered in adenovirus, but other cellular processes, such as double-strand break repair and aggresome formation, have been further elucidated through adenoviral infection. The adenovirus protein E4 11k has been shown to disrupt cytoplasmic processing bodies (p bodies), which are not well-understood but are involved in mRNA metabolism. Several p body proteins were found to be reorganized in the cytoplasm with adenovirus serotype 5 (Ad5) able to cause the colocalization of these p body proteins with aggresomes. The p body …

Watermark Hiding In Hdr Image Based On Visual Saliency And Tucker Decomposition, Roa'a M. Al-Airaji, Ibtisam A. Aljazaery, Haider Th. Salim Alrikabi

Karbala International Journal of Modern Science

Recently, great attention has been paid to high dynamic range (HDR) images because of their richly detailed and high dynamic range of intensity. The need for pre-processing of the HDR image format with tone mapping (TM) operators makes it unique; the TM operators are provided on display with a low dynamic range (LDR). On the other hand, TM can be regarded as an inevitable attack when protecting HDR image ownership is considered. An adaptive approach for concealing watermarks based on visual saliency and Tucker decomposition has been presented in this article. In the first step, three feature maps were produced …

Historical Trends Of Aquatic Invasive Species Introduction And Establishment In Illinois, Usa, Carter S. Cranberg, Reuben Keller

School of Environmental Sustainability: Faculty Publications and Other Works

Tracking the introduction and establishment of aquatic invasive species (AIS) is important for monitoring the biological and economic health of freshwater environments. The state of Illinois (USA) is a critical region for understanding the threats of AIS because it possesses the only continuous aquatic habitat connecting the Laurentian Great Lakes and Mississippi River Basins. In this study, we update a previous effort to catalogue and evaluate historical AIS records from Illinois. Our updated database shows that there are now at least 92 nonindigenous aquatic species established in Illinois and a further 51 have been recorded as introduced but not established. …

Beef Color And Tenderness Response To Production Systems Utilizing Additive Combinations Of Growth-Promotant Technologies, Megan J. Webb, Janna J. Block, John R. Jaeger, R. Funston, Michael G. Gonda, Keith R. Underwood, Judson K. Grubbs, Kenneth C. Olson, Amanda D. Blair

West Central Research and Extension Center, North Platte

The objective of this study was to compare the influence of beef production systems using additive combinations of growth-promotant technologies on meat quality. Steer calves (n = 120) were assigned to 1 of 4 treatments: 1) no technology (NT; control), 2) antibiotic treated (ANT; NT plus therapeutic antibiotics, monensin, and tylosin), 3) implant treated (IMP; ANT plus a series of three implants), and 4) beta-agonist treated (BA; IMP plus ractopamine-HCl). Muscle biopsy samples from the longissimus lumborum were extracted from a subset (n = 4 per treatment) of steers to evaluate expression of calpain-1, calpain-2, and calpastatin using …

Pronghorn Survival And Resource Selection In Western Nebraska's Agriculturally Dominated Landscape, Katie Piecora

School of Natural Resources: Dissertations, Theses, and Student Research

Nebraska’s pronghorn population has been stable over the last decade, yet their presence on the landscape remains a contentious subject amongst private landowners. Conversion of grassland for crop production and increased anthropogenic activity has drastically altered pronghorn behavior throughout their current range, however basic ecology and resource use by pronghorn in Nebraska remains poorly understood. Establishing baseline population metrics and seasonal patterns of resource use for this population at the eastern periphery of the species range is critical to guide management actions. We deployed GPS collars on 110 adult pronghorn to quantify survival, mortality risk, and seasonal resource selection in …

N-Acetyltransferase 9 Ameliorates Aβ42-Mediated Neurodegeneration In The Drosophila Eye, Prajakta Deshpande, Anuradha Venkatakrishnan Chimata, Emily E. Snider, Aditi Singh, Madhuri Kango-Singh, Amit Singh

Biology Faculty Publications

Alzheimer’s disease (AD), a progressive neurodegenerative disorder, manifests as accumulation of amyloid-beta-42 (Aβ42) plaques and intracellular accumulation of neurofibrillary tangles (NFTs) that results in microtubule destabilization. Targeted expression of human Aβ42 (GMR > Aβ42) in developing Drosophila eye retinal neurons results in Aβ42 plaque(s) and mimics AD-like extensive neurodegeneration. However, there remains a gap in our understanding of the underlying mechanism(s) for Aβ42-mediated neurodegeneration. To address this gap in information, we conducted a forward genetic screen, and identified N-acetyltransferase 9 (Mnat9) as a genetic modifier of GMR > Aβ42 neurodegenerative phenotype. Mnat9 is known to stabilize microtubules by inhibiting c-Jun-N- …