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Full-Text Articles in Life Sciences

Extending The Capsicum Growing Season Under Semi-Arid Climate By Using A Suitable Protected Cropping Structure, Giao N. Nguyen, Neil Lantzke Oct 2023

Extending The Capsicum Growing Season Under Semi-Arid Climate By Using A Suitable Protected Cropping Structure, Giao N. Nguyen, Neil Lantzke

Horticulture Research Articles

Carnarvon is a key horticultural district in Western Australia which is located approximately 900 km north of Perth and is characterised by a semi-arid climate. In Carnarvon, capsicum (Capsicum annuum L.) is the second most important vegetable crop after tomato, with approximately 3700 tonnes of capsicum fruit produced annually with a farm gate value of AUD 13.5 million. High temperatures, excessive sunlight, low air humidity, and strong wind in spring and summer are major impediments to the achievement of high yield and quality of capsicum in this region. Capsicums are usually planted between March (early autumn) and May (late autumn), …


Unraveling The Functional Dark Matter Through Global Metagenomics, Georgios A. Pavlopoulos, Fotis A. Baltoumas, Sirui Liu, Oguz Selvitopi, Antonio Pedro Camargo, Stephen Nayfach, Ariful Azad, Simon Roux, Lee Call, Natalia N. Ivanova, Min I. Chen, David Paez-Espino, Evangelos Karatzas, Nathan Ahlgren Oct 2023

Unraveling The Functional Dark Matter Through Global Metagenomics, Georgios A. Pavlopoulos, Fotis A. Baltoumas, Sirui Liu, Oguz Selvitopi, Antonio Pedro Camargo, Stephen Nayfach, Ariful Azad, Simon Roux, Lee Call, Natalia N. Ivanova, Min I. Chen, David Paez-Espino, Evangelos Karatzas, Nathan Ahlgren

Biology

Metagenomes encode an enormous diversity of proteins, reflecting a multiplicity of functions and activities1,2. Exploration of this vast sequence space has been limited to a comparative analysis against reference microbial genomes and protein families derived from those genomes. Here, to examine the scale of yet untapped functional diversity beyond what is currently possible through the lens of reference genomes, we develop a computational approach to generate reference-free protein families from the sequence space in metagenomes. We analyse 26,931 metagenomes and identify 1.17 billion protein sequences longer than 35 amino acids with no similarity to any sequences from 102,491 …


Multifractality In Stride-To-Stride Variations Reveals That Walking Involves More Movement Tuning And Adjusting Than Running, Taylor J. Wilson, Madhur Mangalam, Nicholas Stergiou, Aaron Likens Oct 2023

Multifractality In Stride-To-Stride Variations Reveals That Walking Involves More Movement Tuning And Adjusting Than Running, Taylor J. Wilson, Madhur Mangalam, Nicholas Stergiou, Aaron Likens

Journal Articles

Introduction: The seemingly periodic human gait exhibits stride-to-stride variations as it adapts to the changing task constraints. The optimal movement variability hypothesis (OMVH) states that healthy stride-to-stride variations exhibit “fractality”—a specific temporal structure in consecutive strides that are ordered, stable but also variable, and adaptable. Previous research has primarily focused on a single fractality measure, “monofractality.” However, this measure can vary across time; strideto-stride variations can show “multifractality.” Greater multifractality in stride-tostride variations would highlight the ability to tune and adjust movements more.

Methods: We investigated monofractality and multifractality in a cohort of eight healthy adults during self-paced walking and …


Oregon State Rank Assessment For Oregon Spotted Frog (Rana Pretiosa), Misty Nelson Oct 2023

Oregon State Rank Assessment For Oregon Spotted Frog (Rana Pretiosa), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Oregon spotted frog (Rana pretiosa) using NatureServe methodology, 2023.


Physical Activity And Mental Health Of Youth During The Covid-19 Pandemic, Amber Watson, Alicia Fedewa, Clair Tischner Oct 2023

Physical Activity And Mental Health Of Youth During The Covid-19 Pandemic, Amber Watson, Alicia Fedewa, Clair Tischner

International Journal of Physical Activity and Health

The COVID-19 Pandemic has globally impacted children’s physical activity and mental health outcomes since the transition to remote learning (Štveráková, et al., 2021). Children and adults may encounter negative mental health related consequences, higher stress, and a significant lack of physical activity while in physical and social isolation (Clemente-Suárez, 2022). In particular, school-aged children have experienced a significant reduction in physical activity since transitioning to remote learning and do not have sufficient opportunities to make up for this loss while engaged in remote learning (Štveráková, et al., 2021). Increased physical activity has been consistently correlated with positive mental health outcomes …


In Silico Prediction Of Sodium-Glucose Co-Transporter-2 (Sglt2) Inhibition Activity By Allium Fistulosum Compound Based On Skelspheres Molecular Descriptor, Rudy Heryanto, Aryo Tedjo, Dimas Noor Oct 2023

In Silico Prediction Of Sodium-Glucose Co-Transporter-2 (Sglt2) Inhibition Activity By Allium Fistulosum Compound Based On Skelspheres Molecular Descriptor, Rudy Heryanto, Aryo Tedjo, Dimas Noor

Indonesian Journal of Medical Chemistry and Bioinformatics

The Sodium-Glucose co-transporter-2 (SGLT2) inhibitor represents a novel agent for the treatment of type 2 diabetes. Drugs of this class function by inhibiting glucose reabsorption in the kidneys, thereby controlling blood glucose levels. It is known that SGLT2 inhibitors activate the AMPK signaling pathway by increasing the expression and activity of AMP-activated protein kinase (AMPK). In vivo tests have demonstrated that ethanolic and aqueous extracts of Welsh onion leaves (Allium fistulosum L) can reduce body weight, liver weight, adipocyte size, and enhance AMP-activated protein kinase (AMPK) expression. In this study, the inhibitory activity (IC50) of compounds within Allium fistulosum against …


Road Maintenance Challenges: The Greatest Obstacle To Sustainable Development In South Sudan, Gai Chol Paul Oct 2023

Road Maintenance Challenges: The Greatest Obstacle To Sustainable Development In South Sudan, Gai Chol Paul

Journal of Sustainable Social Impact

Road infrastructure plays a crucial role in the sustainable development of any nation. It connects communities, facilitates trade, and enables essential service delivery. However, road maintenance is one of the most significant challenges hindering sustainable development in South Sudan. The poor roads hinder economic growth, access to essential services, and social cohesion and are in dire need of repair and upkeep. Thus, I developed this qualitative multiple-case study to explore challenges that hinder road maintenance in South Sudan. I collected data through document review and semi-structured interviews with four road engineers, and then thematically analyzed the gathered data. Three themes …


Synapse-Associated Protein 102 – A Highly Mobile Maguk Predominate In Early Synaptogenesis, Dominique Alexandra De Los Reyes, Mohammad Yaman Karkoutly, Yonghong Zhang Oct 2023

Synapse-Associated Protein 102 – A Highly Mobile Maguk Predominate In Early Synaptogenesis, Dominique Alexandra De Los Reyes, Mohammad Yaman Karkoutly, Yonghong Zhang

School of Integrative Biological & Chemical Sciences Faculty Publications

Neurodevelopmental and neurodegenerative disorders are primarily characterized by serious structural and functional changes in excitatory glutamatergic synapses in the brain, resulting in many synaptic deficits and aberrant synapse loss. It is a big challenge to reverse these synaptic impairments as a treatment for neurological diseases in the field. Extensive research on glutamate receptors as therapeutic targets has been done but with little success shown in human trials. PSD-95-like MAGUK proteins perform a pivotal role in regulating the trafficking and stability of glutamate receptors that are important to postsynaptic structure and function. MAGUK and MAGUK-modulated synaptic pathways are becoming promising candidates …


Field-Based Selenium Partitioning Coefficients, Trophic Transfer Factors, And Otolith Time-Series Analyses For A Walleye Community From An Ecotonal Plains Reservoir, Colorado. Iii., Scott J. Herrmann, Del Wayne R. Nimmo, Lynn M. Herrmann-Hoesing, Igor V. Melnykov, Norman M. Halden Oct 2023

Field-Based Selenium Partitioning Coefficients, Trophic Transfer Factors, And Otolith Time-Series Analyses For A Walleye Community From An Ecotonal Plains Reservoir, Colorado. Iii., Scott J. Herrmann, Del Wayne R. Nimmo, Lynn M. Herrmann-Hoesing, Igor V. Melnykov, Norman M. Halden

Western North American Naturalist

Little is known about partitioning coefficients, tissue bioaccumulation, trophic transfer, and otolith timeseries analyses of selenium (Se) in a fishery dominated by walleye (Sander vitreus) that consume multiple prey species and occur in a Se-rich reservoir. Concentrations of dissolved total Se in Pueblo Reservoir water consistently exceeded the current EPA criterion benchmark for lentic aquatic ecosystems. The major objectives of this study were to analyze Se in diet-borne consumables of a walleye fishery and perform time-series trend tests of 21 walleye sagittae. In contrast to previous reports, we proposed investigating Se partitioning from water to subsequent trophic levels …


A Thesis On Phosphatidylserine As A Key Signaling Moiety During Adipocyte Differentiation, Brady Jeffrey Barron Oct 2023

A Thesis On Phosphatidylserine As A Key Signaling Moiety During Adipocyte Differentiation, Brady Jeffrey Barron

Arts & Sciences Graduate Student Theses and Dissertations

The adipose tissue is composed of specialized energy storage cells called adipocytes. In white adipose tissue, when committed precursor cells (preadipocytes), receive specific cues, the preadipocytes differentiate into mature adipocytes via an adipogenic gene program promoted by transcription factors such as PPAR. Phosphatidylserine (PS) is a phospholipid asymmetrically maintained on the inner leaflet of the plasma membrane in healthy cells. PS flipping to the outer leaflet is a well-known hallmark of cell death, such as apoptosis. Here, while exploring the interplay between PS exposure and adipose tissue homeostasis, we made a surprising discovery in that non apoptotic PS exposure occurs …


Genetic And Pharmacological Factors Control Aging In Caenorhabditis Elegans., Brian Mcnally Egan Oct 2023

Genetic And Pharmacological Factors Control Aging In Caenorhabditis Elegans., Brian Mcnally Egan

Arts & Sciences Graduate Student Theses and Dissertations

Aging is a time-dependent decline in organismal structure and function that ultimately results in death. Aging occurs in nearly all metazoan organisms, and is a major risk factor for many human diseases including cancer, diabetes, hypertension, heart disease, and Alzheimer’s Disease. The genetic pathways and mechanistic factors that underly the aging process are poorly understood. Control of aging in the nematode C. elegans can be accomplished via modulation of gene activity by genetic knockdown or by the introduction of inhibitory pharmaceutical compounds. While many such interventions have been described in the literature, understanding the underlying mechanisms that control aging remains …


Rangewide Migratory Connectivity And Migration Ecology In Swainson's Warblers (Limnothlypis Swainsonii) Derived From Multisensor Geolocators, Garrett Rhyne Oct 2023

Rangewide Migratory Connectivity And Migration Ecology In Swainson's Warblers (Limnothlypis Swainsonii) Derived From Multisensor Geolocators, Garrett Rhyne

LSU Master's Theses

Successful conservation of Neotropical migratory passerines requires a detailed understanding of their annual cycle ecology, including wintering and breeding distributions, migratory pathways and stopovers, and migratory phenology. It is also important to evaluate the extent of geographic isolation between separate breeding populations during the nonbreeding season, known as migratory connectivity. Swainson’s Warbler (Limnothlypis swainsonii) is a species of conservation concern that, due to their secretive nature and selection of dense forest habitats, is poorly studied and lacks migratory information. Our objective was to track Swainson’s Warblers across their breeding populations (Mississippi Valley, Coastal Plains, and Appalachian) to detail …


Adaptive Design Of Mrna-Loaded Extracellular Vesicles For Targeted Immunotherapy Of Cancer, Shiyan Dong, Xuan Liu, Ye Bi, Yifan Wang, Abin Antony, Kristin Huntoon, Yifan Ma, Xuefeng Li, Weiye Deng, Benjamin R Schrank, Adam J Grippin, Jonghoon Ha, Minjeong Kang, Mengyu Chang, Yarong Zhao, Rongze Sun, Xiangshi Sun, Jie Yang, Jiayi Chen, Sarah K Tang, L James Lee, Andrew S Lee, Lirong Teng, Shengnian Wang, Lesheng Teng, Betty Y S Kim, Zhaogang Yang, Wen Jiang Oct 2023

Adaptive Design Of Mrna-Loaded Extracellular Vesicles For Targeted Immunotherapy Of Cancer, Shiyan Dong, Xuan Liu, Ye Bi, Yifan Wang, Abin Antony, Kristin Huntoon, Yifan Ma, Xuefeng Li, Weiye Deng, Benjamin R Schrank, Adam J Grippin, Jonghoon Ha, Minjeong Kang, Mengyu Chang, Yarong Zhao, Rongze Sun, Xiangshi Sun, Jie Yang, Jiayi Chen, Sarah K Tang, L James Lee, Andrew S Lee, Lirong Teng, Shengnian Wang, Lesheng Teng, Betty Y S Kim, Zhaogang Yang, Wen Jiang

Faculty, Staff and Student Publications

The recent success of mRNA therapeutics against pathogenic infections has increased interest in their use for other human diseases including cancer. However, the precise delivery of the genetic cargo to cells and tissues of interest remains challenging. Here, we show an adaptive strategy that enables the docking of different targeting ligands onto the surface of mRNA-loaded small extracellular vesicles (sEVs). This is achieved by using a microfluidic electroporation approach in which a combination of nano- and milli-second pulses produces large amounts of IFN-γ mRNA-loaded sEVs with CD64 overexpressed on their surface. The CD64 molecule serves as an adaptor to dock …


Mitochondrial Transplantation And Transfer: The Promising Method For Diseases, Gökhan Burçi̇n Kubat Oct 2023

Mitochondrial Transplantation And Transfer: The Promising Method For Diseases, Gökhan Burçi̇n Kubat

Turkish Journal of Biology

Mitochondria are organelles that serve as the powerhouses for cellular bioenergetics in eukaryotic cells. It is responsible for mitochondrial adenosine triphosphate (ATP) generation, cell signaling and activity, calcium balance, cell survival, proliferation, apoptosis, and autophagy. Mitochondrial transplantation is a promising disease therapy that involves the recovery of mitochondrial dysfunction using isolated functioning mitochondria. The objective of the present article is to provide current knowledge on natural mitochondrial transfer processes, in vitro and in vivo applications of mitochondrial transplantation, clinical trials, and challenges associated with mitochondrial transplantation.


Androgen Receptor Contributes To Repairing Dna Damage Induced By Inflammation And Oxidative Stress In Prostate Cancer, Bi̇lge Debeleç Bütüner, Nurşah Ertunç Hasbal, Eli̇f İşel, Dirk Roggenbuck, Kemal Sami̇ Korkmaz Oct 2023

Androgen Receptor Contributes To Repairing Dna Damage Induced By Inflammation And Oxidative Stress In Prostate Cancer, Bi̇lge Debeleç Bütüner, Nurşah Ertunç Hasbal, Eli̇f İşel, Dirk Roggenbuck, Kemal Sami̇ Korkmaz

Turkish Journal of Biology

Background: Androgen deprivation therapy remains the first-line therapy option for prostate cancer, mostly resulting in the transition of the disease to a castration-resistant state. The lack of androgen signaling during therapy affects various cellular processes, which sometimes paradoxically contributes to cancer progression. As androgen receptor (AR) signaling is known to contribute to oxidative stress regulation, loss of AR may also affect DNA damage level and the response mechanism in oxidant and inflammatory conditions of the prostate tumor microenvironment. Therefore, this study aimed to investigate the role of AR and AR-regulated tumor suppressor NKX3.1 upon oxidative stress-induced DNA damage response (DDR) …


Owning Our Identity – Celebrating Cooperatives In 2023, Charlotte Narjes Oct 2023

Owning Our Identity – Celebrating Cooperatives In 2023, Charlotte Narjes

Cornhusker Economics

Owning Our Identity is the 2023 theme to build awareness of cooperatives nationally. October has been nationally recognized as cooperative month since 1964. The following bullets in this year’s USDA Proclamation emphasize the impact of cooperatives.


Ribosomal Protein L8 Regulates The Expression And Splicing Pattern Of Genes Associated With Cancer-Related Pathways, Leilei Xu, Gui Yang, Bin Song, Dong Chen, Akbar. Yunus, Jiangtao Chen, Xiaogang Yang, Zheng Tian Oct 2023

Ribosomal Protein L8 Regulates The Expression And Splicing Pattern Of Genes Associated With Cancer-Related Pathways, Leilei Xu, Gui Yang, Bin Song, Dong Chen, Akbar. Yunus, Jiangtao Chen, Xiaogang Yang, Zheng Tian

Turkish Journal of Biology

Background/aim: Ribosomal proteins have been shown to perform unique extraribosomal functions in cell apoptosis and other biological processes. Ribosomal protein L8 (RPL8) not only has important nonribosomal regulatory functions but also participates in the oncogenesis and development of tumors. However, the specific biological functions and pathways involved in this process are still unknown. Materials and methods: RPL8 was overexpressed (RPL8-OE) in HeLa cells. MTT assay and flow cytometry were used to detect cell proliferation and apoptosis, respectively. Transcriptome sequencing was performed to analyze the differentially expressed genes (DEGs) and regulated alternative splicing events (RASEs) by RPL8-OE, both of which were …


Farming For Nebraska's Future: Regenerative Agriculture In The Cornhusker State, Megan Buffington Oct 2023

Farming For Nebraska's Future: Regenerative Agriculture In The Cornhusker State, Megan Buffington

Honors Program: Senior Projects (Public)

This reporting project started, as many do, with questions: Who is practicing sustainable agriculture in Nebraska? Why? What is stopping others from doing the same? And what even is sustainable agriculture?

Over the course of this project, I spoke with farmers, ranchers and academics, eventually learning that regenerative agriculture is the more widely used term, and there are a wide swath of systemic barriers preventing more producers from adopting it. But for those who do take the leap, the unconventional method leads to personal and financial well-being traditional agriculture never provided. The final project is made up of three articles …


Braf D594a Mutation Defines A Unique Biological And Immuno-Modulatory Subgroup Associated With Functional Cd8+ T Cell Infiltration In Colorectal Cancer, Kaili Ma, Yujie Lu, Xiaowei Liu, Lianjun Zhang, Feng Guo Oct 2023

Braf D594a Mutation Defines A Unique Biological And Immuno-Modulatory Subgroup Associated With Functional Cd8+ T Cell Infiltration In Colorectal Cancer, Kaili Ma, Yujie Lu, Xiaowei Liu, Lianjun Zhang, Feng Guo

Faculty, Staff and Student Publications

BACKGROUND: BRAF non-V600 mutation occupies a relatively small but critical subset in colorectal cancer (CRC). However, little is known about the biological functions and impacts of BRAF class III mutation in CRC. Here, we aim to explore how D594A mutation impacts on biological behaviors and immune related signatures in murine CRC cells.

METHODS: BRAF V600E (class I), G469V (class II) and D594A (class III) mutant cell lines were established based on MC38 cells. The biological behaviors of cells were evaluated in respect of cell growth, cell proliferation, cell apoptosis, cell migration and invasion by the methods of colony-forming assay, CCK-8 …


Advances And Challenges In Bioinformatics And Biomedical Engineering: Iwbbio 2020, Zhongming Zhao, Ignacio Rojas Oct 2023

Advances And Challenges In Bioinformatics And Biomedical Engineering: Iwbbio 2020, Zhongming Zhao, Ignacio Rojas

Faculty, Staff and Student Publications

This Supplement issue, presents five research articles which are distributed, mainly due to the subject they address, from the 8th International Work-Conference on Bioinformatics and Biomedical Engineering (IWBBIO 2020), which was held on line, during September, 30th-2nd October, 2020. These contributions have been chosen because of their quality and the importance of their findings. Those contributions were then invited to participate in this supplement for the following journals of BMC: BMC Bioinformatics and BMC Genomics. In the present Editorial in BMC journal, we summarize the contributions that provide a clear overview of the thematic areas covered by the IWBBIO conference, …


Smokejumper Obituary: Hatch, Charles R. "Chuck" (Grangeville 1963), National Smokejumper Association Oct 2023

Smokejumper Obituary: Hatch, Charles R. "Chuck" (Grangeville 1963), National Smokejumper Association

Smokejumper Obituaries

No abstract provided.


Gooseberry Anthocyanins Alleviate Insulin Resistance By Regulating Ceramide Metabolism In High Fat Diet Mice, Xian Tang, Jun Gao, Jinpeng Huang, Chenjuan Zhang, Hongwei Liu, Jie Wei Oct 2023

Gooseberry Anthocyanins Alleviate Insulin Resistance By Regulating Ceramide Metabolism In High Fat Diet Mice, Xian Tang, Jun Gao, Jinpeng Huang, Chenjuan Zhang, Hongwei Liu, Jie Wei

Turkish Journal of Biology

Background/aim: Obesity is the fifth largest risk factor of death in the world. The ceramide produced by obesity is closely related to insulin resistance (IR) caused by obesity. At present, the commercially available weight loss products have large side effects and limited therapeutic effects. Therefore, it is particularly important to find effective natural nontoxic products to treat obesity and explore its possible pathways and mechanisms. Materials and methods: In this paper, a high-fat diet (HFD) mice model was established by intragastric administration of high-fat emulsion to investigate the intervention effect of Gooseberry anthocyanins (GA) on IR in HFD mice. We …


Genetic Analysis Of Basal Stalk Rot Resistance Introgressed From Wild Helianthus Petiolaris Into Cultivated Sunflower (Helianthus Annuus L.) Using An Advanced Backcross Population, Zahirul I. Talukder, William Underwood, Christopher G. Misar, Xuehui Li, Gerald J. Seiler, Xiwen Cai, Lili Qi Oct 2023

Genetic Analysis Of Basal Stalk Rot Resistance Introgressed From Wild Helianthus Petiolaris Into Cultivated Sunflower (Helianthus Annuus L.) Using An Advanced Backcross Population, Zahirul I. Talukder, William Underwood, Christopher G. Misar, Xuehui Li, Gerald J. Seiler, Xiwen Cai, Lili Qi

Department of Agronomy and Horticulture: Faculty Publications

Introduction: Sclerotinia sclerotiorum is a serious pathogen causing severe basal stalk rot (BSR) disease on cultivated sunflower (Helianthus annuus L.) that leads to significant yield losses due to insufficient resistance. The wild annual sunflower species H. petiolaris, commonly known as prairie sunflower is known for its resistance against this pathogen. Sunflower resistance to BSR is quantitative and determined by many genes with small effects on the resistance phenotype. The objective of this study was to identify loci governing BSR resistance derived from H. petiolaris using a quantitative trait loci (QTL) mapping approach.

Methods: BSR …


Effect Of Exogenous Melatonin On Metabolic Profile And Reproductive Performance In Undernourished Suckling Merino Ewes In The Early Postpartum Period, Bariş Güner, Buse Öztürk, Aslihan Ayalp, İhsan Kisadere, Nevzat Saat, Muhi̇tti̇n Zengi̇n, Recai̇ Kulaksiz, Şükrü Meti̇n Pancarci Oct 2023

Effect Of Exogenous Melatonin On Metabolic Profile And Reproductive Performance In Undernourished Suckling Merino Ewes In The Early Postpartum Period, Bariş Güner, Buse Öztürk, Aslihan Ayalp, İhsan Kisadere, Nevzat Saat, Muhi̇tti̇n Zengi̇n, Recai̇ Kulaksiz, Şükrü Meti̇n Pancarci

Turkish Journal of Veterinary & Animal Sciences

This study aimed to determine whether serum metabolite and hormones of ewes with low body condition scores subjected to the melatonin plus progesterone-based protocol (MPE) would be similar to a single progesterone-based protocol (PE) and whether melatonin ear implant supplementation could increase pregnancy rate. Ninety suckled Merino ewes with singleton lamb were equally allocated in two experimental groups (MPE, PE) and a control group (CON) on days 53 ± 3 (D0) postpartum. Ewes in MPE group were subjected to exogenous melatonin plus progesterone-based protocol [Melatonin (day 0) + P4 insertion (day 35) + 500 IU eCG (day 42)]. Ewes in …


Comparison Of Carcass Characteristics, Meat Quality, And Fatty Acid Composition In Slowand Fast-Growing Broilers At Different Slaughter Weights, Büşra Yaranoğlu, Hi̇lal Çapar Akyüz, Esi̇n Ebru Onbaşilar Oct 2023

Comparison Of Carcass Characteristics, Meat Quality, And Fatty Acid Composition In Slowand Fast-Growing Broilers At Different Slaughter Weights, Büşra Yaranoğlu, Hi̇lal Çapar Akyüz, Esi̇n Ebru Onbaşilar

Turkish Journal of Veterinary & Animal Sciences

This study aimed to compare the slaughter, meat quality characteristics, and fatty acid composition of fast-growing (FAG) and slow-growing (SWG) broilers at different slaughter weights. In the experiments, a total of 90 carcasses were used: 45 SWG (Hubbard-Isa Red JA) and 45 FAG broilers (Ross 308) with 15 carcasses from each slaughter weight group (1500 ± 50 g, 2000 ± 50 g, 2500 ± 50 g). Hot carcass yield and cold carcass yield detected in the FAG broilers were higher than in SGW broilers (p < 0.001). As the weight of slaughter increased, hot carcass and cold carcass yield increased (p < 0.001). The breast percentage was significantly lower in the SWG broilers compared to the FAG broilers (p < 0.001). In contrast, thigh, wing, and abdominal fat percentages were higher in the SWG broilers (p < 0.001). The breast percentage increased as the slaughter weight increased (p < 0.001). SWG broilers had significantly lower pH, except for the pH 24 of the thigh meat (p < 0.01). The L*, a*, and b* values of the SWG broilers were lower than the FAG broilers (p < 0.01). In terms of a* values determined initially and at the 24th h in the breast and thigh meat, the 1500 g slaughter weight group had by far the highest value (p < 0.01). SWG broilers had significantly lower values in terms of cooking loss, water-holding capacity, and drip loss (p < 0.001). C18:2ω6 was detected at higher amounts in the FAG broilers (p < 0.05). The FAG broilers had higher PUFA, desired fatty acids, PUFA/SFA, and thrombogenic index values (p < 0.05). The results show that FAG broilers can meet the strong worldwide demand for meat quantity and quality. Slaughter weight changes only affected the quantity of the meat.


In Vitro Determination Of The Anthelmintic Potential Of Arum Rupicola Boiss Var. Rupicola, Tuğrul Atalay, Kader Yildiz Oct 2023

In Vitro Determination Of The Anthelmintic Potential Of Arum Rupicola Boiss Var. Rupicola, Tuğrul Atalay, Kader Yildiz

Turkish Journal of Veterinary & Animal Sciences

Arum rupicola Boiss var. rupicola is a preferred ingredient in traditional medicine in various countries, including Türkiye. The current study aims to establish the antiparasitic effect of A. rupicola Boiss var. rupicola on the eggs and larvae of T. canis in vitro. An ovicidal effect was not detected in the plant extracts, and embryogenesis in the T. canis eggs was not affected by the leaves' ethanolic extract and the distilled water extract of the rhizome during the incubation periods (6, 12, and 24 h). The larvicidal activity was observed in both extracts on the T. canis larvae after hatching. All …


Thermodynamic Frustration Of Tad2 And Prr Contribute To Autoinhibition Of P53, Emily Gregory Oct 2023

Thermodynamic Frustration Of Tad2 And Prr Contribute To Autoinhibition Of P53, Emily Gregory

USF Tampa Graduate Theses and Dissertations

The intrinsically disordered transcription factor and tumor suppressor p53 binds to promoter response element DNA upon cellular stress and activates genes associated with cell cycle arrest, senescence, and apoptosis. Disruption of sequence specific binding to target gene promoters is heavily implicated in human health, where a majority of cancers contain mutations localized to the DNA binding domain (DBD) of p53. p53 DNA binding is regulated by posttranslational modifications, associations with cellular factors, and by an autoinhibitory intramolecular interaction. The autoinhibitory intramolecular interaction occurs when the disordered N-terminal transactivation domain (TAD) interacts with the ordered DBD. Previous work in the Daughdrill …


Association Between Whole Blood-Derived Mitochondrial Dna Copy Number, Low-Density Lipoprotein Cholesterol, And Cardiovascular Disease Risk, Meng Lai, Lawrence F Bielak, Wei Zhao, Achilleas Pitsillides, Jeffrey Haessler, Yinan Zheng, Thomas W Blackwell, Jie Yao, Xiuqing Guo, Yong Qian, Bharat Thyagarajan, Nathan Pankratz, Stephen S Rich, Kent D Taylor, Patricia A Peyser, Susan R Heckbert, Sudha Seshadri, Eric Boerwinkle, Nicholas B Larson, Jennifer A Smith, Ramachandran S Vasan, Annette L Fitzpatrick, Myriam Fornage, Jun Ding, April P Carson, Goncalo Abecasis, Josée Dupuis, Alexander Reiner, Charles Kooperberg, Lifang Hou, Bruce M Psaty, James G Wilson, Daniel Levy, Jerome I Rotter, Joshua C Bis, Claudia L Satizabal, Dan E Arking, Chunyu Liu Oct 2023

Association Between Whole Blood-Derived Mitochondrial Dna Copy Number, Low-Density Lipoprotein Cholesterol, And Cardiovascular Disease Risk, Meng Lai, Lawrence F Bielak, Wei Zhao, Achilleas Pitsillides, Jeffrey Haessler, Yinan Zheng, Thomas W Blackwell, Jie Yao, Xiuqing Guo, Yong Qian, Bharat Thyagarajan, Nathan Pankratz, Stephen S Rich, Kent D Taylor, Patricia A Peyser, Susan R Heckbert, Sudha Seshadri, Eric Boerwinkle, Nicholas B Larson, Jennifer A Smith, Ramachandran S Vasan, Annette L Fitzpatrick, Myriam Fornage, Jun Ding, April P Carson, Goncalo Abecasis, Josée Dupuis, Alexander Reiner, Charles Kooperberg, Lifang Hou, Bruce M Psaty, James G Wilson, Daniel Levy, Jerome I Rotter, Joshua C Bis, Claudia L Satizabal, Dan E Arking, Chunyu Liu

Faculty, Staff and Student Publications

Background The relationship between mitochondrial DNA copy number (mtDNA CN) and cardiovascular disease remains elusive. Methods and Results We performed cross-sectional and prospective association analyses of blood-derived mtDNA CN and cardiovascular disease outcomes in 27 316 participants in 8 cohorts of multiple racial and ethnic groups with whole-genome sequencing. We also performed Mendelian randomization to explore causal relationships of mtDNA CN with coronary heart disease (CHD) and cardiometabolic risk factors (obesity, diabetes, hypertension, and hyperlipidemia).


Helping Frontline Workers In Texas-A Framework For Resource Development, Tiffany Champagne-Langabeer Oct 2023

Helping Frontline Workers In Texas-A Framework For Resource Development, Tiffany Champagne-Langabeer

Faculty, Staff and Student Publications

First responders disproportionately experience occupational stress when compared to the general population, and COVID-19 has exacerbated this stress. The nature of their duties as law enforcement officers, firefighters, and medics exposes them to repeated trauma, increasing their risk of developing a broad array of mental health issues, including post-traumatic stress disorder (PTSD), substance use disorder (SUD), and compassion fatigue. This paper describes the need for resources for frontline workers and provides a framework for creating and implementing resources. A team of interdisciplinary subject matter experts developed two major resources. The first resource was a 24/7 helpline to support first responders …


Evaluation Of The Effects Of Ghrelin And Metformin On Sperm Parameters, Testosterone Hormones, And Immunohistochemical And Immunofluorescent Markers In An Experimental Diabetes Model, Saadet Belhan, Zübeyi̇r Huyut, Serkan Yildirim, Özlem Ergül Erkeç, Uğur Özdek Oct 2023

Evaluation Of The Effects Of Ghrelin And Metformin On Sperm Parameters, Testosterone Hormones, And Immunohistochemical And Immunofluorescent Markers In An Experimental Diabetes Model, Saadet Belhan, Zübeyi̇r Huyut, Serkan Yildirim, Özlem Ergül Erkeç, Uğur Özdek

Turkish Journal of Veterinary & Animal Sciences

Testicular dysfunction, a severe secondary complication of diabetes, negatively affects reproductive health. Ghrelin is a peptide that plays a role in many metabolic events, such as stimulating growth hormones and regulating appetite, blood pressure, and reproduction. Metformin has antiinflammatory and antioxidant properties and is widely used to treat type 2 diabetes. Therefore, in this study, to investigate the effects of ghrelin and metformin on testicular function in experimental diabetic rats given streptozotocin, placed on a high-fat diet, and that had their sperm parameters evaluated, testosterone hormone, caspase 3 and iNOS expression, and histopathological examinations were performed. In total, 38 Wistar …