Life Sciences Commons^™

Monocytes And Macrophages Promote Increased Tissue Factor-Factor Viia-Dependent Procoagulant Activity In Response To The Sars-Cov-2 Spike Protein, James Harte

ORBioM (Open Research BioSciences Meeting)

Background

Venous thromboembolism (VTE) is a high-incidence complication of severe SARS-CoV-2-associated COVID-19. Recently, abnormal tissue factor expression has been linked to thromboembolic events in patients with COVID-19. Monocytes and macrophages are the predominant source of tissue factor in peripheral circulation, which suggests a potential pathomechanistic interplay between SARS-CoV-2 and the monocyte-macrophage axis. However, the link between monocytes and macrophages and the thromboembolic risk associated with COVID-19 is largely unaddressed.

Aims

In this study, we investigated changes in monocyte/macrophage procoagulant activity in response to the SARS-CoV-2 spike protein.

Methods

Immortalised human-derived monocytes and differentiated macrophages were treated with the SARS-CoV-2 spike …

Valorising Urban Organic Waste Streams Through Agrochemical Extraction And Organic Acid Production Via Cascading Biorefinery Approach, Shon Shiju Mr

ORBioM (Open Research BioSciences Meeting)

The CircBioCityWaste project is based on the vital principle of the ‘circular bioeconomy’ focusing on the sustainable, resource-efficient valorisation of anaerobic digestate, from urban waste streams (mainly, wastewater treatment plants, dairy processed sludge (DPS), food waste, and organic fraction of municipal solid waste (OFMSW)) to produce bio-based agrochemicals (biostimulants and biofertilisers) and organic acids via the cascading biorefinery concept. The project focuses on an ‘end-of-waste’ approach to producing deliverables for sustainable agriculture, promoting plant growth, and improving soil health while keeping circular bio-economy aspects in the focus. The biorefinery starts with digestate collection, characterisation, development of pre-treatment methods, and novel …

Grass-Based Supplementation To Reduce Slaughter Age In Dairy-Beef Steers, Jamie O'Driscoll

ORBioM (Open Research BioSciences Meeting)

Background

Reducing slaughter age, while maintaining carcass output, will improve the sustainability of beef production systems. This will result in lower lifetime emissions from cattle, while also reducing the carbon equivalent per kilogram of beef carcass. The objective of this study was to investigate the strategic use of concentrate feed within pasture-based dairy-beef steer production systems, to establish its effectiveness in reducing slaughter age in differing animal genotypes.

Methods

Three contrasting supplementation strategies were implemented: 1) grass only (GO), pasture only diet in the first and second grazing season, 2) intermediate (INTER), concentrate supplementation throughout the first grazing season, pasture …

The Detection Of Putative Recessive Lethal Haplotypes In Irish Sheep Populations, Rory Mcauley

ORBioM (Open Research BioSciences Meeting)

In livestock populations, recessive lethal alleles are a known contributor to poor reproductive performance due to embryonic death in homozygous individuals. Despite their lethal effect in the recessive form, these alleles may be maintained at high frequencies among carrier animals because of their positive pleiotropic effects on economically important traits. Although several such recessive alleles have been identified in cattle and pig populations, limited studies have been completed in sheep, and none within Irish sheep populations. Genotype data for 69,034 animals from five major Irish sheep breeds genotyped on a variety of panels was available for this study. Only animals …

Genetic Evaluation Of Enteric Methane For Sustainable Irish Beef Cattle, Clodagh Ryan

ORBioM (Open Research BioSciences Meeting)

Background:

Globally, livestock agriculture significantly contributes to human-induced greenhouse gas emissions, particularly through methane production. A potential approach to effectively, durably, and progressively reduce enteric methane emissions at a reasonable cost is through animal breeding.

Methods:

Individual animal methane records were available from 1,508 multi-breed growing beef cattle using GreenFeed Emission Monitoring systems. The objective of this study was to derive genetic parameters for a series of definitions of enteric methane, carbon dioxide, and dry matter intake (DMI). Estimated breeding values (EBVs) were generated for nine alternative definitions of enteric methane and EBVs were validated against phenotypic performance (adjusted for …

Oregon State Rank Assessment For Mottled Sculpin (Cottus Bairdii), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Mottled sculpin (Cottus bairdii) using NatureServe methodology, 2023.

Intraspecific Variation Of Morphological Traits Backed Up With Molecular Evidence Votes For Re‑Appraisal Of Hitherto Distinguished Balaustium Species—A Case Study Of Balaustium Murorum (Acariformes: Parasitengona, Erythraeidae), Joanna Mąkol, Magdalena Felska

Harold W. Manter Laboratory of Parasitology: Library Materials

Molecular examination of representatives of Balaustium from several populations in SW Poland, performed using the sequence data from the mitochondrial cytochrome c oxidase subunit I, confirmed their common specific affiliation and identity with Balaustium murorum. The potential presence of distinct species in the studied material, preliminarily inferred from the discovery of clusters as a result of Principal Component Analysis exploring the metric data sets, was rejected due to the finding of only one haplotype, at intra- and inter-population sampling. An insight into meristic traits in larvae, focused on chaetotaxy of legs, revealed wider variation than hitherto recognized for the …

A Highly Selective Optical Sensor Eu-Binam For Assessment Of High Sensitivity Cardiac Troponin Tumor Marker In Serum Of Cancer Patients, Ekram Hany Mohamed, Mohamed S. Attia, Ahmed O. Youssef, Shahenda S. Ahmed

Pharmacy

A novel, easy, touchy and selective spectrofluorimetric technique has been successfully applied for sensitive determination of High Sensitivity Cardiac Troponin (TNHS I) in the serum samples of patients suffering malignant tumors through the usage of optical sensor Eu3+-BINAM complex. The technique is primarily based on quenching of the Eu3+-BINAM complex's luminescence intensity upon introducing various concentrations of High Sensitivity Cardiac Troponin (TNHS I). The synthesis and characterization of the optical sensor was performed via absorption and emission. The sensor was also adapted to offer excitation at 394 nm in acetonitrile at pH 7.5. Concentration of High Sensitivity Cardiac Troponin (TNHS …

Doxorubicin-Induced Modulation Of Tgf-Β Signaling Cascade In Mouse Fibroblasts: Insights Into Cardiotoxicity Mechanisms, Conner Patricelli, Parker Lehmann, Julia Thom Oxford, Xinzhu Pu

Biology Faculty Publications and Presentations

Doxorubicin (DOX)-induced cardiotoxicity has been widely observed, yet the specific impact on cardiac fibroblasts is not fully understood. Additionally, the modulation of the transforming growth factor beta (TGF-β) signaling pathway by DOX remains to be fully elucidated. This study investigated DOX’s ability to modulate the expression of genes and proteins involved in the TGF-β signaling cascade in mouse fibroblasts from two sources by assessing the impact of DOX treatment on TGF-β inducible expression of pivotal genes and proteins within fibroblasts. Mouse embryonic fibroblasts (NIH3T3) and mouse primary cardiac fibroblasts (CFs) were treated with DOX in the presence of TGF-β1 to …

Using Machine Learning To Measure Changes In Immunity Due To Climate Change In The Fall Armyworm, Spodoptera Frugiperda, Nathaniel T. Haulk

LSU Master's Theses

Object detection is a recent development that allows for the detection of multiple objects in photographs. Numerous machine learning algorithms have been developed for object detection. Here we sought to determine which algorithm performed best when relating to an organism's health and immunological response. The fall armyworm (Spodoptera frugiperda) is a major agricultural pest causing millions of dollars in damage to farmlands across the globe. With their recent spread into Africa and Asia, the need for understanding how best to control population outbreaks via biocontrol has increased. While viruses are a major biocontrol agent for controlling insect pests, we …

Oregon State Rank Assessment For Paiute Sculpin (Cottus Beldingii), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Paiute sculpin (Cottus beldingii) using NatureServe methodology, 2023.

Containerized Satsuma Mandarin Production Under Protective Screens As A Management Strategy, Anna Timmerman

LSU Master's Theses

Many of the world’s citrus growing regions are experiencing challenges related to citrus greening, also known as Huanglongbing (HLB) caused by the presumed bacterial agent Candidatus Liberibacter spp. HLB is vectored by the Asian citrus psyllid (Diaphorina citri) and through propagation of infected citrus material. HLB impacts tree health as well as fruit development, ripening, and quality of the resulting citrus fruit, often leading to an unmarketable product. Producers are growing citrus in high density orchards underneath protective screening material that excludes the Asian citrus psyllid, preventing new HLB infections. Four ultra-high containerized tree spacings of 2 feet …

Angiogenic Potential Of Skeletal Muscle Derived Extracellular Vesicles Differs Between Oxidative And Glycolytic Muscle Tissue In Mice, Christopher K. Kargl, Zhihao Jia, Deborah A. Shera, Brian P. Sullivan, Lundon C. Burton, Kun Ho Kim, Yaohui Nie, Monica J. Hubal, Jonathan H. Shannahan, Shihuan Kuang, Timothy P. Gavin

Purdue University Libraries Open Access Publishing Fund

Skeletal muscle fibers regulate surrounding endothelial cells (EC) via secretion of numerous angiogenic factors, including extracellular vesicles (SkM-EV). Muscle fibers are broadly classified as oxidative (OXI) or glycolytic (GLY) depending on their metabolic characteristics. OXI fibers secrete more pro-angiogenic factors and have greater capillary densities than GLY fibers. OXI muscle secretes more EV than GLY, however it is unknown whether muscle metabolic characteristics regulate EV contents and signaling potential. EVs were isolated from primarily oxidative or glycolytic muscle tissue from mice. MicroRNA (miR) contents were determined and endothelial cells were treated with OXI- and GLY-EV to investigate angiogenic signaling potential. …

Estimating Heritability Explained By Local Ancestry And Evaluating Stratification Bias In Admixture Mapping From Summary Statistics, Mariaelisa Graff, Heather M Highland, Su Yon Jung, Eimear E Kenny, Charles Kooperberg, Loic Le Marchand, Kari E North, Ran Tao, Genevieve Wojcik, Christopher R Gignoux, Charleston W K Chiang, Nicholas Mancuso

Faculty, Staff and Student Publications

The heritability explained by local ancestry markers in an admixed population (h

Associations Between Rest-Activity Rhythms And Liver Function Tests: The Us National Health And Nutrition Examination Survey, 2011-2014

Faculty, Staff and Student Publications

Liver functions are regulated by the circadian rhythm; however, whether a weakened circadian rhythm is associated with impaired liver function is unclear. This study aims to investigate the association of characteristics of rest-activity rhythms with abnormal levels of biomarkers of liver function. Data were obtained from the National Health and Nutrition Examination Survey 2011-2014. Seven rest-activity rhythm parameters were derived from 24 h actigraphy data using the extended cosine model and non-parametric methods. Multiple logistic regression and multiple linear regression models were used to assess the associations between rest-activity rhythm parameters and alanine aminotransferase (ALT), aspartate aminotransferase (AST), alkaline phosphatase …

Comparison Of Dna Extraction Methods For The Detection Of Canned Tuna Species With Dna Mini-Barcoding, Aubrey J. Emmi, Biola Fatusin, Rosalee S. Hellberg

Food Science Faculty Articles and Research

Tuna is susceptible to species mislabeling due to its high demand, quick rate of production, and wide range of price points. DNA barcoding, a sequencing-based technique, allows for the detection of species mislabeling by targeting a standardized region of DNA. A mitochondrial control region (CR) DNA barcode has been found to be capable of species discrimination for tuna, but it is challenging to recover the entire DNA fragment from canned tuna. While a short fragment of CR, referred to as a “mini-barcode,” has shown some success with canned tuna species identification, more research is needed to improve identification rates. The …

Impact Of Area-Wide And Localized Mosquito Adulticide On Insecticide Susceptibility In Populations Of Culex Quinquefasciatus (Diptera: Culicidae) In New Orleans, Louisiana., Erin Rita Cloherty

LSU Doctoral Dissertations

Abstract

Mosquitoes are a public nuisance and can vector pathogen causing diseases that affect both animal and human health. West Nile virus, vectored by Culex quinquefasciatus, the Southern House mosquito, made its entry into Louisiana early in the 21^st century, causing serious morbidity and mortality. Effective use of insecticides can be useful to combat these mosquitoes and reduce transmission of disease, however use of insecticides can lead to insecticide resistance.

The objectives of this study were to: (1) to screen adult Cx. quinquefasciatus throughout Orleans Parish, Louisiana for insecticide resistance and explore target-site and metabolic mechanisms of resistance, (2) …

Identification Of Quantitative Trait Loci (Qtl) Of Agronomic, Forage, And Milling Traits In A Southeastern Us Oat Association Panel, Kelly Joseph Arceneaux

LSU Doctoral Dissertations

Common oat (Avena sativa L.) is an allohexaploid (AACCDD, 2n = 6x = 42) crop grown primarily for human consumption and animal feed, and as a forage source worldwide. Southern oat breeding programs prioritize forage yield and regrowth, grain yield and quality, winter hardiness, and disease resistance. While spring oat breeding programs target grain yield and quality (beta-glucan content), winter oat breeding programs target forage yield and quality in addition to grain yield. Recent advances in genotyping by sequencing (GBS) and single nucleotide polymorphism (SNP) array have facilitated identification of quantitative trait loci (QTLs) and SNPs controlling various traits through …

The Effects Of Acute Hyperosmolality On Immune Cell Functions And Nutrient Sensing, Joshua Granger

LSU Doctoral Dissertations

Hyperosmolar hyperglycemic syndrome (HHS) is a life-threating endocrine emergency commonly seen with type 2 diabetes. HHS has been identified to begin when hyperglycemia leads to glucosuria diuresis, which eventually leads to hyperosmotic conditions. However, hyperosmolality has not been considered as an initiator of HHS, although past research would suggest that it can initiate HHS, specifically through systemic inflammation and glucose insensitivity.

The first study examined the impact of exercise induced hypohydration effect on T-cell populations. After healthy participants reached hypohydration they were then rehydrated with water and monitored for 3-hours. Results indicated that rehydration attenuated the efflux of T-cells from …

Racial Disparities In Mit Family Translocation Renal Cell Carcinoma, Xiaofan Lu, Nassim Tawanaie Pour Sedehi, Xiaoping Su, Fangrong Yan, Omar Alhalabi, Gabriel G Malouf

Faculty, Staff and Student Publications

Racial disparities have been documented in the biology and outcome of certain renal cell carcinomas (RCCs) among Black patients. However, little is known about racial differences in MiT family translocation RCC (TRCC). To investigate this issue, we performed a case-control study using data from The Cancer Genome Atlas (TCGA) and the Chinese OrigiMed2020 cohort. A total of 676 patients with RCC (14 Asian, 113 Black, and 525 White) were identified in TCGA, and TRCC was defined as RCC with TFE3/TFEB translocation or TFEB amplification, leading to 21 patients with TRCC (2 Asian, 8 Black, 10 White, and 1 unknown). Asian …

Potentiation Of Apoptosis In Drug-Resistant Mantle Cell Lymphoma Cells By Mcl-1 Inhibitor Involves Downregulation Of Inhibitor Of Apoptosis Proteins, Yijing Li, Heng-Huan Lee, Vivian Changying Jiang, Yuxuan Che, Joseph Mcintosh, Jovanny Vargas, Fangfang Yan, Margaret Elizabeth Simmons, Wei Wang, Lei Nie, Yixin Yao, Preetesh Jain, Michael Wang, Yang Liu

Faculty, Staff and Student Publications

Bruton's tyrosine kinase inhibitors (BTKi) and CAR T-cell therapy have demonstrated tremendous clinical benefits in mantle cell lymphoma (MCL) patients, but intrinsic or acquired resistance inevitably develops. In this study, we assessed the efficacy of the highly potent and selective MCL-1 inhibitor AZD5991 in various therapy-resistant MCL cell models. AZD5991 markedly induced apoptosis in these cells. In addition to liberating BAK from the antiapoptotic MCL-1/BAK complex for the subsequent apoptosis cascade, AZD5991 downregulated inhibitor of apoptosis proteins (IAPs) through a BAK-dependent mechanism to amplify the apoptotic signal. The combination of AZD5991 with venetoclax enhanced apoptosis and reduced mitochondrial oxygen consumption …

Language Nativeness Modulates Physiological Responses To Moral Vs Immoral Concepts In Chinese-English Bilinguals: Evidence From Event-Related Potential And Psychophysiological Measures, Fei Gao, Chenggang Wu, Hengyi Fu, Kunyu Xu, Zhen Yuan

Faculty, Staff and Student Publications

Morality has been an integral part of social cognition and our daily life, and different languages may exert distinct impacts on human moral judgment. However, it remains unclear how moral concept is encoded in the bilingual brain. This study, therefore, aimed to explore the emotional and cognitive involvement of bilingual morality judgement by using combined event-related potential (ERP) and psychophysiological (including skin, heart, and pulse) measures. In the experiment, thirty-one Chinese-English bilingual participants were asked to make moral judgments in Chinese and English, respectively. Our results revealed increased early frontal N400 and decreased LPC in L1 moral concept encoding as …

Comparison Of Non-Laser And Laser Transvenous Lead Extraction: A Systematic Review And Meta-Analysis, Zaki Akhtar, Christos Kontogiannis, Georgios Georgiopoulos, Christoph T Starck, Lisa W M Leung, Byron K Lee, Manav Sohal, Mark M Gallagher

Faculty, Staff and Student Publications

AIMS: Transvenous lead extraction (TLE) is performed using non-laser and laser techniques with overall high efficacy and safety. Variation in outcomes between the two approaches does exist with limited comparative evidence in the literature. We sought to compare non-laser and laser TLE in a meta-analysis.

METHODS AND RESULTS: We searched Medline, Embase, Scopus, ClinicalTrials.gov, and CENTRAL databases for TLE studies published between 1991 and 2021. From the included 68 studies, safety and efficacy data were carefully evaluated and extracted. Aggregated cases of outcomes were used to calculate odds ratio (OR), and pooled rates were synthesized from eligible studies to compare …

Incidence And Risk Factors For Pneumonitis Associated With Checkpoint Inhibitors In Advanced Non-Small Cell Lung Cancer: A Single Center Experience, Mehmet Altan, Felipe Soto, Linda L Zhong, Fechukwu O Akhmedzhanov, Nathaniel R Wilson, Aya A Albittar, Jeff Lewis, Waree Rinsurongkawong, J Jack Lee, Vadeerat Rinsurongkawong, Jianjun Zhang, Don L Gibbons, Ara A Vaporciyan, Kristofer Jennings, Fareed Khawaja, Saadia A Faiz, Vickie R Shannon, Girish Shroff, Myrna C B Godoy, Naval G Daver, Saumil Gandhi, Tito R Mendoza, Aung Naing, Carrie Daniel-Macdougall, John V Heymach, Ajay Sheshadri

Faculty, Staff and Student Publications

INTRODUCTION: Immune checkpoint inhibitor (ICI) pneumonitis causes substantial morbidity and mortality. Estimates of real-world incidence and reported risk factors vary substantially.

METHODS: We conducted a retrospective review of 419 patients with advanced non-small cell lung cancer (NSCLC) who were treated with anti-PD-(L)1 with or without anti-CTLA-4 therapy. Clinical, imaging, and microbiological data were evaluated by multidisciplinary adjudication teams. The primary outcome of interest was grade ≥2 (CTCAEv5) pneumonitis. Clinicopathologic variables, tobacco use, cancer therapies, and preexisting lung disease were assessed for univariate effects using Cox proportional hazards models. We created multivariate Cox proportional hazards models to assess risk factors for …

Center For Grassland Studies, November 2023

Center for Grassland Studies: Newsletters

Contents

Experiential Learning for Grassland Conservation by David Wedin

Center for Grassland Studies Policy Advisory Committee

Director’s Column by David Wedin

New Woody Invasions Ecologist Brings Additional Capacity for Grassland Conservation by Dillon Fogarty

Twidwell Racks-up awards for his work in Grassland Conservation by Geitner Simmons

Platte Basin Timelapse premieres New Film on Nine-Mile Prairie by David Wedin

CRAWL: Update on the Network for Integrated Agricultural Resilience Research by Craig Allen

CGS Outreach by Jerry Volesky

Center for Grassland Studies Awards 19 Scholarships Totaling $17,500 for 2023-2024 by David Wedin

Award winners:

Joseph O. Young Fund = Makenna Anderson, Makennen …

Protecting Wa Crops Issue 35 - November 2023, Department Of Primary Industries And Regional Development, Western Australia

Protecting WA Crops

Protecting WA Crops Issue 35 - November 2023 contents:

• Modelling to increase understanding of Ascochyta blight aggressiveness in chickpea crops
• Meet Crop Protection team member – Dr Rodrigo Pires

Kentucky Warbler (Vol. 99, No. 4), Department Of Library Special Collections

The Kentucky Warbler

No abstract provided.

Identification Of Significant Gene Expression Changes Incorporating Heterogeneity In Perturbation Experiments, Katharine Cross

Honors Projects in Biological and Biomedical Sciences

Machine learning methods have been widely applied to the field of genomics and bioinformatics. Specifically utilizing novel machine learning algorithms to study gene-drug interactions has the potential to make a major positive impact on new drug discovery. It is possible that heterogeneity may exist within Vorinostat drug perturbation experiments due to the effects of the perturbations on the gene expressions. Thus, the challenge is to identify the most important genes in a high-dimensional setting while first identifying subpopulations to address population heterogeneity. In this work, clustering techniques are applied to first identify group sub-population structures in the gene expression changes …

The Casnr L.I.N.K.S. Newsletter: Learning Innovation Network For K-12 Schools, Volume 2, Edition 10, November 2023, Bailey Feit, Tammy Mittelstet

CASNR L.I.N.K.S. Newsletter

The purpose of this L.I.N.K.S. newsletter is to provide a monthly update of opportunities and resources for K-12 schools to connect with the University of Nebraska's CASNR Food, Energy, Water, and Societal Systems (FEWS²) programs and partners.

Included in this edition:

UNL Institute of Agriculture and Natural Resources, Agricultural Economics, high school commodity market curriculum

UNL CASNR Changemaker competition

UNL Department of Food Science and Technology

Health system innovators spotlight

UNL Department of Biochemistry

UNL Department of Microbiology

Student and teacher opportunities:

Engler Agribusiness, Native American Coalition, Next Black and Hispanic Farmers Scholarship, World Food Prize Youth Institute scholarship, Midwest …

Individual And Population Age Impact Social Behavior And Network Structure In A Long-Lived Insect, P. A. Cook, R. A. Costello, Vincent A. Formica, E. D. Brodie Iii

Biology Faculty Works

Social behaviors vary among individuals, and social networks vary among groups. Understanding the causes of such variation is important for predicting or altering ecological processes such as infectious disease outbreaks. Here, we ask whether age contributes to variation in social behavior at multiple levels of organization: within individuals over time, among individuals of different ages, among local social environments, and among populations. We used experimental manipulations of captive populations and a longitudinal dataset to test whether social behavior is associated with age across these levels in a long-lived insect, the forked fungus beetle (Bolitotherus cornutus). In cross-sectional analyses, …