Life Sciences Commons^™

The Influence Of Rusty Crayfish And Zebra Mussel Invasion On Yellow Perch Population Dynamics In North-Central Minnesota Lakes, Kendra Fink

Biology Graduate Theses

Over the last 50 years, Minnesota Department of Natural Resources standard fisheries survey catch rates of Yellow Perch have declined. Yellow Perch Perca flavescens are an important, widespread game fish, are essential prey species for Walleye Sander vitreus and other piscivorous fish and rely greatly on benthic resources through many life stages. Aquatic invasive species (AIS) like rusty crayfish Faxonius rusticus and zebra mussels Dreissena polymorpha have the potential to change water quality, vegetation and prey assemblages in aquatic systems and could cause shifts in energy flow, subsequently altering growth, condition, and maturity of native fish species. In this study, …

Social Media Impacts On Arkansas Consumer Perceptions Of Gmos, Elizabeth R. Berner

Graduate Theses and Dissertations

This study builds upon previous consumer perceptions of GMOs studies. A need existed to determine what, if any, effects social media messages about GMOs had on consumer perceptions in Arkansas. The study utilized a qualitative approach with three focus groups. Data were analyzed using descriptive code. Participants were found to have a general understanding of GMOs, though discussion about what a GMO product was took an uncertain tone. Most participants did not consider GMOs as a factor when purchasing products. Rather participants considered characteristics such as price, quality, and convenience. Participants did not believe the infographics had changed their opinions …

Developing Recommendations For Broad Mite, Polyphagotarsonemus Latus Banks, In Blackberry, Rubus Subgenus Rubus, Jared Bradley Linn

Graduate Theses and Dissertations

Broad mite, (Polyphagotarsonemus latus Banks) (Acari: Tarsonemidae), is an economically important pest of blackberry production across the world. Since it was first reported on primocane-fruiting blackberries in 2010, little work has gone into developing IPM tools and understanding impact on floricane-fruiting cultivars. The objective of this thesis was to evaluate the effect of broad mite feeding on floricane-fruiting cultivars of blackberry, develop an efficient and accurate field scouting strategy, and investigate the impact of cultivar and trellising technique on the development of broad mite populations. Experiments consisted of evaluating floricane fruiting cultivars by quantifying broad mite populations and cataloging their …

Extraction Of Transcriptional Regulators For The Polyhydroxyalkanoate Depolymerase Gene From Streptomyces Nymphaeiformis, Kara B. Eppard, Stephen F. Baron

Honors Projects

Plastic waste has become an increasingly prevalent environmental pollutant. This problem is exacerbated by the inability of plastic to degrade under most natural conditions. In contrast, polyhydroxyalkanoates (PHAs) are biologically produced, plastic-like polymers that can be broken down and metabolized by bacteria. The bacterium Streptomyces nymphaeiformis can degrade the PHA, polyhydroxybutrate (PHB), using an extracellular PHB depolymerase, which is encoded by the phaZ gene. PHB depolymerase is synthesized only in the presence of PHB or its monomer, but not glucose, suggesting that transcription of phaZ is regulated, presumably by transcriptional regulatory proteins that bind to its promoter region. The DNA …

Growing Agriculture Literacy’S Presence In America’S Classrooms, Emily Stone

Journal of Food Law & Policy

“Americans, as a whole, were at least two generations removed from the farm and did not understand even the most rudimentary of processes, challenges, and risks that farmers and the agricultural industry worked with and met head-on every day.” This quote perfectly describes the mindset of agriculture stakeholders in 1981 as they began to realize the drastic steps our education system had taken away from using principles of agriculture in K-12 education. As they saw it, Americans were moving out of rural America, away from farms, and becoming less connected to the food they daily consumed. Simultaneously, the education system …

The Contradictory Nature Of U.S. Laws And Nutrition Programs And Their Effects On Infant Feeding, Lily Patel

Journal of Food Law & Policy

The contradictory nature of U.S. laws, including the laws concerning infant feeding, though supposedly aligned with policies to promote wellness in Americans, can exacerbate gender and race inequality and work against the National Strategy. The overarching goal of U.S. laws concerning infant feeding is to ensure that infants are fed, nourished, and receive proper nutrition. However, the laws often appear to be directly contradictory to one another in the priorities they are promoting.

Mechanical Properties Of Natural Osmia Lignaria Silk And Recombinant Expression Of The Silk Proteins, Jackson Morley

Undergraduate Honors Capstone Projects

The use of petroleum-based plastic and the subsequent waste has led researchers to explore alternatives in the form of biopolymers. Spider silk and hagfish intermediate filaments show the potential to be advantageously utilized in textile and biomedical industries. Bee silk is a sparsely studied biopolymer that has shown potential to be added to these other impressive biopolymers. Osmia lignaria, is a solitary bee native to the western United States. Silk from these bees can be isolated while the larvae are spinning their silk. The silk from these bees has been mechanically tested for strength, stress, strain, and elasticity. Cocoon …

Molecularly Defined And Spatially Resolved Cell Atlas Of The Whole Mouse Brain, Meng Zhang, Xingjie Pan, Won Jung, Aaron R Halpern, Stephen W Eichhorn, Zhiyun Lei, Limor Cohen, Kimberly A Smith, Bosiljka Tasic, Zizhen Yao, Hongkui Zeng, Xiaowei Zhuang

Faculty, Staff and Student Publications

In mammalian brains, millions to billions of cells form complex interaction networks to enable a wide range of functions. The enormous diversity and intricate organization of cells have impeded our understanding of the molecular and cellular basis of brain function. Recent advances in spatially resolved single-cell transcriptomics have enabled systematic mapping of the spatial organization of molecularly defined cell types in complex tissues1-3, including several brain regions (for example, refs. 1-11). However, a comprehensive cell atlas of the whole brain is still missing. Here we imaged a panel of more than 1,100 genes in approximately 10 million cells across the …

Gru-D-Weibull: A Novel Real-Time Individualized Endpoint Prediction, Xiaoyang Ruan, Liwei Wang, Charat Thongprayoon, Wisit Cheungpasitporn, Hongfang Liu

Faculty, Staff and Student Publications

Background: In the era of healthcare digital transformation, using electronic health record (EHR) data to generate various endpoint estimates for active monitoring is highly desirable in chronic disease management. However, traditional predictive modeling strategies leveraging well-curated data sets can have limited real-world implementation potential due to various data quality issues in EHR data.

Methods: We propose a novel predictive modeling approach, GRU-D-Weibull, which models Weibull distribution leveraging gated recurrent units with decay (GRU-D), for real-time individualized endpoint prediction and population level risk management using EHR data.

Experiments: We systematically evaluated the performance and showcased the real-world implementability of the proposed …

Selecting Patient-Reported Outcome Measures For A Patient-Facing Technology, Priyank Raj, Youmin Cho, Yun Jiang, Yang Gong

Faculty, Staff and Student Publications

OBJECTIVE: This article provides insight into our process and considerations for selecting patient-reported outcome measures (PROMs) designed for self-reporting symptoms and quality-of-life among breast cancer (BCA) patients undergoing oral anticancer agent treatment via a patient-facing technology (PFT) platform.

METHODS: Following established guidelines, we conducted a thorough assessment of a specific set of PROMs, comparing their content to identify the most suitable options for studying BCA patients.

RESULTS: We recommend utilizing the combination of EORTC QLQ-C30 + EORTC QLQ-BR45 as the preferred instrument, especially when developing a dedicated "breast cancer-only" application.

DISCUSSION: When developing and maintaining a dashboard for a PFT …

Virtual Reality In Simulation-Based Emergency Skills Training: A Systematic Review With A Narrative Synthesis, Jonathan R Abbas, Michael M H Chu, Ceyon Jeyarajah, Rachel Isba, Antony Payton, Brendan Mcgrath, Neil Tolley, Iain Bruce

Faculty, Staff and Student Publications

OBJECTIVE: An important role is predicted for virtual reality (VR) in the future of medical education. We performed a systematic review of the literature with a narrative synthesis, to examine the current evidence for VR in simulation-based emergency skills training. We broadly define emergency skills as any clinical skill used in the emergency care of patients across all clinical settings.

METHODS: This systematic review followed the Preferred Reporting Items for Systematic Reviews and Meta Analyses (PRISMA) guidelines. The data sources accessed during this study included: PubMed, CINAHL, EMBASE, AMED, EMCARE, HMIC, BNI, PsychINFO, Medline, CENTRAL, SCOPUS, Web of Science, BIOSIS …

The Influence Of Watershed Restoration Initiative Habitat Treatments On Mule Deer Relative Use And Fawn Production In Utah, Jaylin Solberg

All Graduate Theses and Dissertations, Fall 2023 to Present

Multiple factors could be the cause of mule deer (Odocoileus hemionus) population decline across the West such as an increase in non-native vegetation, human expansion, climate change, or a combination of these. Populations of mule deer generate substantial revenue for local communities and hold ecological, cultural, and social value. Therefore, wildlife researchers are increasing their efforts in improving environmental conditions that support mule deer growth. The Utah Department of Natural Resources and partners have taken proactive measures through the Utah Watershed Restoration Initiative (WRI) to improve mule deer habitats by restoring these environments to improve their quality for …

Impact Of Moisture Content And Composition On Flow Properties Of Dairy Powders, Katelynn Palmer

All Graduate Theses and Dissertations, Fall 2023 to Present

Milk protein concentrate (MPC) and isolate (MPI), and milk permeate powder (MPP) are functional dairy powder products that are used in food applications worldwide. It is critical that environmental factors and physical powder characteristics during production and storage are controlled. When dairy powders are exposed to non-ideal conditions (high moisture, varying temperatures,) they can quickly become very sticky, and clumpy. When powders become sticky, their ability to easily flow is reduced. As a result, processing and storing the powders effectively and sustainably becomes very difficult.

In the first study, an analysis method was created to test the general flow behavior …

Ecology And Management Of Dyer's Woad (Isatis Tinctoria) In Northern Utah, Erin Marie Hettinger

All Graduate Theses and Dissertations, Fall 2023 to Present

Dyer’s woad (Isatis tinctoria L.) is a non-native forb that continues to threaten natural areas throughout Northern Utah and much of the Intermountain West. Once introduced, dyer’s woad can become extremely invasive, decreasing forage quality, and displacing native species. While dyer’s woad is found throughout much of Northern Utah, its range in other states remains limited. If promptly managed, control success in these areas will be much higher and populations may be kept at bay before ecological damage becomes severe.

This project tested the ability of dyer’s woad seedlings to compete with common rangeland grasslands at varied densities as …

The Many Side Jobs Of Lateral Suppressor (Ls) In Plant Development, Janlo M. Robil

Biology Faculty Publications

No abstract provided.

Doxorubicin-Induced Changes To The Tgf-Β Signaling Pathway And Autophagic Flux In Fibroblasts: Implications For Cardiotoxicity, Conner Patricelli

Boise State University Theses and Dissertations

Doxorubicin is a commonly used chemotherapeutic used to treat many different types of cancer. However, its clinical use is limited due to its cardiotoxic adverse effects. While multiple mechanisms have been shown to be responsible for doxorubicin-induced cardiotoxicity, it is generally accepted that the principle mechanism is oxidative stress induction through the production of reactive oxygen species and free radicals in the myocardium. However, efforts to reduce/prevent doxorubicin toxicity using antioxidants have largely failed in pre-clinical and clinical trials. The targeted approach using a liposome delivery of doxorubicin significantly reduced the risk of cardiotoxicity; however, this approach is limited to …

Impacts Of Environmental Stressors On Native South Dakota Amphibian Physiology And Survival, Danielle Jean Galvin

Dissertations and Theses

Amphibian populations around the world are declining, with some of the most likely drivers behind these declines including emerging infectious diseases and environmental contaminants. To address major gaps in the current literature, I sought to evaluate the effect of two major environmental stressors on various aspects of amphibian physiology: emerging infectious diseases and environmental contaminants. Emerging infectious diseases of amphibians include fungal, viral, and parasitic pathogens which have expanded in host range, either geographically or in competent host species. Environmental contaminants include chemicals which may be naturally occurring in the environment, or which may be introduced to the environment, often …

A Comparison Of Devices For Race Day Characterization Of North American Turfgrass Thoroughbred Racing Surfaces, Peter Schmitt, Wayne T. Sanderson, John Trey Rogers Iii, Tyler J. Barzee, Michael L. Peterson

UK CARES Faculty Publications

Both pre-race meet and daily turf surface condition measurements are required by regula- tions adopted as part of the Horseracing Integrity and Safety Act (HISA). The Orono Biomechanical Surface Tester (OBST) is the primary device used for characterizing a racing surface and is used for the pre-meet inspections. Tools that are better suited for the daily testing of turf surfaces are also needed to meet the new federal regulations. The purpose of this study was to compare five simple tools commonly used in turf applications to the OBST. Data were collected with each of the six devices at plots chosen …

Disinfection Of Foodborne Bacteria Using The Contamination Sanitization Inspection And Disinfection (Csi-D) Device, Jennifer Mccoy Sanders

Food Science (MS) Theses

Foodborne pathogens, including Escherichia coli, Salmonella enterica, and Listeria monocytogenes, are major causes of gastrointestinal disease globally. The Contamination Sanitization Inspection and Disinfection (CSI-D) device is a new handheld fluorescence-based imaging system designed to disinfect food contact surfaces contaminated with microorganisms using ultraviolet-C (UVC) illumination. This study aimed to determine the optimal parameters for the disinfection of foodborne bacteria using the CSI-D device. The following bacterial strains were tested: generic E. coli; enterohemorrhagic E. coli (EHEC) O157:H7; enterotoxigenic E. coli (ETEC) O78:H11; S. enterica serotypes Enteritidis, Newport, Typhimurium, and Javiana; and L. monocytogenes serotypes 1/2a, 1/2b, and 4b …

Fall Field Report, August–November 2023, W. Ross Silcock

Nebraska Bird Review

As in the last few fall seasons, late departure dates continue to increase in number. This is often attributed to a warming climate but may also result from increased observer activity and usage of eBird. Late dates are probably the most important aspect of this report, most prominent the record late fall dates for Ruby-throated Hummingbird, Sanderling, Bank Swallow, and Cassin’s Sparrow. Although these species are taxonomically diverse, there were species group concentrations of late dates, notably among shorebirds. Examples were Marbled Godwit for which the four latest reports this fall were four of the latest six fall dates on …

Index To Volume 91

Nebraska Bird Review

Adams: Pam 11; Paul 11
Aden, Debbie 55
Allard, Savannah 29
Allen, Edward 10
Allison, Betty 30
Alpheus, A. 154
Altman, Dakota 21, 30
Andersen: Bennett 30; Brett 30, 52, 142; D. E. 83
Anderson: Bob 139, 147; Chris 7; Janet 29; Will 68
Angkaew, Rongron 6
Ani, Groove-billed 127, 131
Anich: Charlie 99; Nick 99; Paula 99
Arends, Jim 30
Armstrong, Wyatt 121
Askerooth, Kristine 29
Atkins, Kate 16
Atwell, Erik 55, 58, 99, 100, 102, 112
Audubon, M. 82
Augustine, Jackie 63
Austin, Mary 7
Avocet, American 19, 53, 86, 100, 132, 158

. . .

Zach, Joel …

Yellow-Throated Warbler In Scotts Bluff County, Nebraska, Mark A. Brogie, Bill F. Huser, Jerry Probst

Nebraska Bird Review

Yellow-throated Warbler (Setophaga dominica) is a rare to uncommon migrant in eastern and central Nebraska. It is possibly a regular breeder locally at sites containing sycamores in several southeastern Nebraska counties bordering the Missouri River. There are few Nebraska reports after July, with more reports November–January than August–October. This species has three previous documented Nebraska Panhandle records, all from May.

1. One photographed 26 May 2009, at Crescent Lake NWR, Garden Co.

2. One seen and “well described” 06 May 1931, at Antioch, Sheridan Co.

3. A specimen taken 20 May 1917, at Oshkosh, Garden Co., was once …

Can The Vegetation Structure And Composition In Urban Green Spaces Determine Diversity Of Green Lacewings (Neuroptera: Chrysopidae)?, Jose I. Martinez, Raiza J. Castillo, Adrián Ardila-Camacho, Charles V. Covell, José Isabel López-Arroyo, Francisco Javier Nava-Guízar

Insecta Mundi

Green spaces represent the only natural areas in several cities around the world, providing good shelters for the local fauna. Based on this premise, many ecological studies have been conducted focused on these areas. Most of these works are about insects, particularly butterflies and beetles. Our study is centered on a different group: green lacewings (Neuroptera: Chrysopidae). These insects exhibit a similar feeding behavior to some other groups, such as beetles. We estimated diversity, richness, distribution, abundance and similarity employing two methods: sweep netting and suction trapping. Also, oviposition hosts were identified in 20 different green spaces. Approximately 740 specimens …

The Stick Insects (Insecta: Phasmatodea) From The Cloud Forest Of The Chicaque Natural Park, Colombia, Andres David Murcia, Oscar J. Cadena-Castañeda

Insecta Mundi

A faunal study for the order Phasmatodea of the Chicaque Natural Park is presented, including a list of species found, descriptions, redescriptions, and biological notes. A total of nine species were found and studied; two new genera: Ramandeun new genus, Nubilophasma new genus, and four new species: Atrato­morpha jorgei new species, Isagoras franciscoverai new species, Nubilophasma chicaquensis new genus and new species, and Ramandeum coronatum new genus and new species are described. The description of the eggs of the new taxa, of the previously unknown eggs of Paraceroys quadrispinosus (Redtenbacher, 1906), and the redescription of …

Genomics-Based Taxonomic Rearrangement Of Achlyodini And Carcharodini (Lepidoptera: Hesperiidae: Pyrginae), Jing Zhang, Qian Cong, Jinhui Shen, Leina Song, Nick V. Grishin

Insecta Mundi

Genomic analysis of Pyrginae Burmeister, 1878 (Lepidoptera: Hesperiidae Latreille, 1809) with an emphasis on the tribes Achlyodini Burmeister, 1878 and Carcharodini Verity, 1940 reveals many incon­sistencies between the resulting phylogeny and the current classification. These problems are corrected by proposing new taxa, changing the ranks of others, or synonymizing them, and transferring species between genera. As a result, five subtribes, one genus, 20 subgenera, and one species are proposed as new: Cyclo­semiina Grishin, new subtribe (type genus Cyclosemia Mabille, 1878), Ilianina Grishin, new subtribe (type genus Iliana E. Bell, 1937), Nisoniadina Grishin, new subtribe (type genus Nisoniades Hübner, [1819]), …

Defensive Behaviors Of The Mealybug Nipaecoccus Nipae (Maskell, 1893) (Hemiptera: Pseudococcidae) And The Green Lacewing Ceraeochrysa Claveri (Navás, 1911) (Neuroptera: Chrysopidae), With Videos Of Dorsal Packet Loading And Mealybug Ostiole Function, Erin C. Powell

Insecta Mundi

The interactions between the lacewing Ceraeochrysa claveri (Navás) (Neuroptera: Chrysopidae) larva and the coconut mealybug Nipaecoccus nipae (Maskell) (Hemiptera: Pseudococcidae) were recorded. The third-instar lacewing larva constructed a dorsal packet using mealybug wax from both male pupal cases and the bodies of adult females. Surprisingly, live nymphs were also frequently placed into the dorsal packet. Prey mealybugs were discarded and not incorporated into the packet after consumption. When disturbed, adult female mealybugs reflex bled from their dorsal ostioles, contacting the mouthparts of the lacewing. The lacewing quickly retreated to clean the mouthparts on the substrate, providing further evidence that ostiolar …

Descriptions Of One Hundred New Species Of Hesperiidae, Jing Zhang, Qian Cong, Nick V. Grishin

Insecta Mundi

A century and a half since the time of Hewitson, we are experiencing a renaissance in species discovery fueled by whole genome sequencing. A large-scale genomic analysis of Hesperiidae Latreille, 1809 (Lepidoptera), including primary type specimens, reveals a deluge of species new to science. One hundred of them (one in a new genus) are described here from the New World (type localities are given in parenthesis): Drephalys (Drephalys) diovalis Grishin, new species (Ecuador: Napo), Euriphellus panador Grishin, new species (Ecuador: Esmeraldas), Euriphellus panamicus Grishin, new species (Panama: Panama), Cecropterus (Thorybes) viridissimus Grishin, new species (Ecuador: Zamora-Chinchipe), …

The Nebraska Bird Review (December 2023) 91(4), Whole Issue

Nebraska Bird Review

Fall Field Report, August–November 2023, by W. Ross Silcock

NOU Founding Ornithologist, Hypnotist, Physician: Isador Trostler, by Rick Wright

Yellow-throated Warbler in Scotts Bluff County, Nebraska, by Mark A. Brogie, Bill F. Huser, and Jerry Probst

Holdrege Fall Field Days, Sept. 22–24, 2023

Index to Volume 91

Subscription and Organization Information

Holdrege Fall Field Days, Janis Paseka

Nebraska Bird Review

The 2023 NOU Fall Field Days were held in Holdrege on September 22–24, with approximately 45 in attendance. The programs were held at the Rodeway Inn. The meeting was planned by Robin Harding, Jan Johnson, and Ruthie Stearns. Field trips were led by Robin Harding, Paul Dunbar, and William Flack to numerous locations including Johnson Lake SRA, Elwood Reservoir WMA, the eagle viewing site on the Phelps County Canal in northern Gosper Co., the Platte River bridge south of Overton, Cottonwood WPA, Harlan Co. Reservoir, the Alma water treatment plant, Funk WPA, Nature's Mosaic Recreation Area, and Sacramento-Wilcox WPA.

The …

The Discovery Of Diverse Picophytoplankton Populations In The Columbia And Willamette Rivers Using Flow Cytometry, Kylee M. Lamberson

Chemistry Undergraduate Departmental Honors Theses

As important primary producers, picophytoplankton determine the flow of carbon and energy in aquatic ecosystems. Picocyanobacteria are one picophytoplankton group known to be dominant in oceans and lakes, but they are still poorly understood in river systems. This project examined picophytoplankton communities in two distinct river systems: the Columbia and Willamette Rivers in Portland, Oregon. I aimed to characterize and quantify the picophytoplankton populations in the context of the environmental conditions of the two rivers. I used flow cytometry to detect cells based on their relative size and pigment fluorescence. I sampled nearly weekly for ten months to capture population …