Life Sciences Commons^™

Effect Of Personalized Spinal Profile On Its Biomechanical Response In An Emg-Assisted Optimization Musculoskeletal Model Of The Trunk, C. Larivière, A.H. Eskandari, H. M., F. Ghezelbash, D. Gagnon, A. Shirazi-Adl

Études primaires

Recent developments in musculoskeletal (MS) modeling have been geared towards model customization. Personalization of the spine profile could affect estimates of spinal loading and stability, particularly in the upright standing posture where large inter-subject variations in the lumbar lordosis have been reported. This study investigates the biomechanical consequences of changes in the spinal profile. In 31 participants (healthy and with back pain), (1) the spine external profile was measured, (2) submaximal contractions were recorded in a dynamometer to calibrate the EMG-driven MS model and finally (3) static lifting in the upright standing challenging spine stability while altering load position and …

Comparative Evaluation Of Different Spinal Stability Metrics, Amir Hossein Eskandari, Farshid Ghezelbash, Aboulfazl Shirazi-Adl, Christian Larivière

Études primaires

Direct in vivo measurements of spinal stability are not possible, leaving computational estimations (such as dynamic time series and structural analyses) as the feasible option. However, differences between different stability assessment approaches and metrics remain unclear. To explore this, we asked 32 participants to perform 35 cycles of repetitive lifts with and without load (4/2.6 kg for males/females). EMG signals and 3D kinematics were collected via 12 surface electrodes and 17 inertial sensors, and three dynamical stability measures were computed: short and long temporal and conventional maximum Lyapunov exponents (LyE) and maximum Floquet multipliers (FM). A dynamic subject-specific EMG-assisted musculoskeletal …

Reliability And Minimal Detectable Change Of The Mx3 Hydration Testing System, Ian Winter, Josie Burdin, Patrick B. Wilson

Exercise Science Faculty Publications

Assessing hydration status outside of laboratories can be challenging given that most hydration measures are invasive, stationary, costly, or have questionable validity. This study investigated the within-day, test-retest reliability, and minimal detectable change (MDC) of the MX3 Hydration Testing System (MX3 Diagnostics), a relatively low cost, noninvasive, and portable method to measure saliva osmolality. Seventy-five adults (44 men, 31 women; 29.6±10.8 yr, 171.1±9.2 cm, 79.1±15.4 kg) presented two saliva samples approximately 3 to 5 minutes apart. Fluid intake was avoided for at least 5 minutes prior to sample collections. For each sample collection, a researcher used the MX3 to tap …

Associations Between Urine Specific Gravity And Race/Ethnicity At The Population Level: Implications For Hydration Status Categorization, Ian P. Winter, Brain K. Ferguson, Patrick B. Wilson

Exercise Science Faculty Publications

Objective

We aimed to evaluate how urine specific gravity (USG) and rates of supposed hypohydration vary by race/ethnicity, and to examine how adjustment for several important factors impacts estimated USG.

Methods

Using the National Health and Nutrition Examination Survey, this cross‐sectional study evaluated a total of 4195 (2098 female, 2097 male) Americans and categorized them as supposedly hypohydrated (USG≥1.020) or not using spot urine samples. USG and prevalence of supposed hypohydration were compared across racial/ethnic groups, separately by gender. The analyses considered the impact of urine creatinine, body composition, age, dietary nutrients, and physical activity.

Results

Differences in supposed hypohydration …

Fat-Free Mass Is Positively Associated With Urine Specific Gravity In Athletes And Active Adults: A Quantitative Review, Patrick B. Wilson, Ian P. Winter

Exercise Science Faculty Publications

Background: Urine specific gravity (USG) is a commonly used assessment method to estimate the prevalence of hypohydration, typically based on a common threshold of ≥ 1.020. Some research has shown that USG can vary based on body size and composition, but the evidence to date is limited. This review examined whether an association between fat-free mass (FFM), a component of body composition, and USG could be detected among published articles that have reported these variables in athletes and physically active individuals.

Methods: By searching Google Scholar, the authors identified a large number of published articles (n = 161) reporting anthropometrics …

Expanded Range Of Nasutitermes Callimorphus Mathews, 1977 (Isoptera: Termitidae: Nasutitermitinae), Comparison With N. Corniger (Motschulsky, 1855) And N. Ephratae (Holmgren, 1910), And Synonymy Of N. Dasyopsis Thorne, 1989 Into N. Nigriceps (Haldeman, 1854), Allen Szalanski

Entomology and Plant Pathology Faculty Publications and Presentations

The imago of N. callimorphus is described for the first time. Nasutitermes callimorphus occurs from Mexico to Paraguay. Nasutitermes callimorphus is smaller in all measurements but generally resembles its widely distributed sympatric congeners, N. corniger (Motschulsky, 1855) and N. ephratae (Holmgren, 1910). Molecular phylogenetic analysis of a portion of the mitochondrial 16S rRNA gene and the COII mtDNA marker revealed that N. callimorphus forms a distinct clade using both maximum parsimony and maximum likelihood analysis. Unlike N. corniger and N. ephratae, N. callimorphus does not build epigeal or arboreal carton nests. We further regard N. dasyopsis Thorne, 1989 as a …

Mitochondrial Dna Genetic Variation Of Feral And Managed Honey Bee, Apis Mellifera, Colonies From Oklahoma, Allen Szalanski

Entomology and Plant Pathology Faculty Publications and Presentations

Understanding the genetic diversity of honey bees in North America provides valuable insight into the conservation, ecology, and evolution of this economically important insect. Here, we characterized the mitochondrial DNA (mtDNA) genetic variation in populations of the honey bee, Apis mellifera L., in Oklahoma by sequencing a portion of the mitochondrial cytochrome oxidase (COI-COII) intergenic region. The samples were primarily of feral origin (n = 164), as well as from 24 managed colonies. Samples were obtained from 50 of Oklahoma's 77 counties, which represented six distinct ecoregions. Of the 188 colonies sampled,19 distinct haplotypes were observed, which included: A (African) …

Two New Incisitermes (Isoptera: Kalotermitidae) Species From The Caribbean Basin, Genetic Relationships With Other Regional Incisitermes, And Synonymy Of Incisitermes Tabogae With I. Schwarzi, Allen Szalanski

Entomology and Plant Pathology Faculty Publications and Presentations

Two new species of Incisitermes are described from the soldier and imago caste: Incisitermes lisae sp. nov. (Yucatan Region) and Incisitermes mariae sp. nov. (Venezuela and Trinidad and Tobago). Incisitermes tabogae (Snyder, 1924) is reduced to a junior synonymy of Incisitermes schwarzi (Banks, 1920), known from Florida, the West Indies, and the Caribbean basin mainland. The phylogenetic relationships of these three species are compared with other Incisitermes of the region.

2024 Weed Science Research Report – Gold Section, Ndsu Weed Science, Dept. Of Plant Sciences

Plant Sciences Weed Science Reports

The Weed Science team at North Dakota State University conduct field research in the State of North Dakota. This specific document reports on field research conducted in 2024. It includes work on sugarbeet crops and the management of several weeds in North Dakota.

Active Uncertainty Representation Learning: Toward More Label Efficiency In Deep Learning, Salman Mohamadi

Graduate Theses, Dissertations, and Problem Reports (ETD)

The primary goal of this dissertation is to investigate and improve the efficiency of deep learning algorithms, especially within computer vision problem domains, from the perspective of label-efficiency. This investigation showed that deep learning algorithms are mostly notorious for the lack of uncertainty representation. Accordingly, we aimed to develop an array of deep learning frameworks rich with uncertainty representation. These frameworks are mainly within two current pillars of machine learning, deep active learning and self-supervised learning. These frameworks include deep active ensemble sampling for efficient sample selection within deep active learning, a two-stage ensemble-based general self-training approach for existing visual …

Measuring And Modeling Riparian Wetland Saturated Hydraulic Conductivity, Nutrient Concentrations And Shallow Groundwater Dynamics In An Appalachian Mixed Land Use Catchment, Bidisha Faruque Abesh

Graduate Theses, Dissertations, and Problem Reports (ETD)

The paucity of research on accurate predictions of saturated hydraulic conductivity (Ksat), spatiotemporal analysis of nutrient concentrations relative to water source types (stream and shallow groundwater (SGW)), water flow directions, and land use in riparian wetlands of Appalachian mixed land use catchments underscored the need for this study. Additionally, the lack of SGW flow simulations and stream-SGW interactions using three-dimensional (3D) numerical models (i.e., MODFLOW) in these riparian wetlands further highlighted the research gap. Observed data including soil properties, Ksat, surface water (SW) and SGW levels, and nutrient concentrations, including nitrate (NO3-N), nitrite (NO2-N), ammonium (NH4-N), orthophosphate (PO43-P), total nitrogen …

Characterizing 4,4’-Methylene Diphenyl Diisocyanate Exposure In Primary Human Epidermal Keratinocytes: A Multi-Omics Approach, Brandon F. Law

Graduate Theses, Dissertations, and Problem Reports (ETD)

Exploring the routes of exposure and biological fate of 4,4’-methylene diphenyl diisocyanate (MDI) has been a challenge for many years. Occupational exposure to MDI can result in the development of occupational asthma (MDI-OA) which results in loss of productivity, large economic costs, and costs to the individual worker. Initially, it was thought that respiratory exposure to MDI was the most likely route leading to MDI-OA. Industries utilizing MDI have been successful at controlling airborne concentrations according to industrial hygiene assessment and newly diagnosed cases of MDI-OA decreased and plateaued. New research suggests that dermal exposures to MDI may explain this …

Assessing Carbon Sequestration Of Mixed Hardwood Forests Through Optimizing Harvesting Strategies And Biomass Utilization For Biochar, Bibek Aryal

Graduate Theses, Dissertations, and Problem Reports (ETD)

This study investigated the long-term carbon stock of central Appalachian mixed hardwood forests under several harvesting strategies. The strategies were optimized to maximize both long-term carbon sequestration and timber supply during harvest using Mixed-Integer Linear Programming (MILP) models. Clear-cut (CC), Partial cut (PC), and mixed harvesting methods to unharvested conditions over 190 years were studied. Initially, harvested forests showed lower sequestration rates than unharvested forests but eventually surpassed them, with CC showing the highest rates over time. Younger forests, particularly those aged 85 to 130 years, exhibited peak carbon sequestration rates. Regarding carbon stock, the unharvested scenario initially had the …

Personalized Molecular Therapies For Advanced Non-Small Cell Lung Cancer: Overcoming Heterogeneity To Optimize Treatment Response And Clinical Outcomes, Zuan-Fu Lim

Graduate Theses, Dissertations, and Problem Reports (ETD)

Lung cancer remains one of the deadliest cancers. Novel, paradigm shifting treatments including immunotherapy and targeted therapies have recently been developed to cull the deadly effects of lung cancer, but many challenges remain. There remains a significant unmet need to accurately predict and optimally select for patients who will respond to immune checkpoint inhibitors (ICI) treatment. In Chapter 2 of this dissertation, we investigated a novel live single cell cytokine profiling lab-on-chip platform, IsoLight, using peripheral CD4+ and CD8+ T-cells for ICI biomarker development. A total of 55,175 single T-lymphocytes were analyzed in this proof-of-concept study. We found that an …

Anti-Listeria Of H2o2-Peroxyacetic Acid Anti-Listeria Efficacy Of A Hydrogen Peroxide-Peroxyacetic Acid Mixer In Bacterial Buffered Solution And On Bell Peppers, Peighton Denae Foster

Graduate Theses, Dissertations, and Problem Reports (ETD)

This study aims to 1) evaluate the efficacy of H₂O₂-peroxyacetic acid (PAA) mixer to inactivate Listeria monocytogenes in 0.1% buffered-peptone-water; 2) evaluate the reduction and mitigation of cross-contamination on peppers. For the study-1, aliquots of 1.0-ml mixer solutions (0.25, 0.50 and 0.84%) were added to the first 3-well of 8-strip-deep-well microplates. Then, the 0.1 ml of 10-fold dilution the Nalidixic-acid-resistant (NaL) L. monocytogenes was added and mixed immediately with a multichannel pipette. After exposure for 0, 5, 15, 30, and up to 120-s, 1 ml of 2×D/E neutralized solution was added to terminate the reaction followed …

An Investigation Into Secondary Transfer Of Trace Dna To Evidentiary Items Via Nitrile Gloves During Crime Scene Examination, Molly G. Younker

Graduate Theses, Dissertations, and Problem Reports (ETD)

An investigation into secondary transfer of trace DNA to evidentiary items via nitrile gloves during crime scene examination

Molly G. Younker, B.S.

The introduction of highly sensitive DNA profiling kits has led to an increase in success with samples containing sub-nanogram amounts of DNA such as touched or handled objects including doorknobs, tools, steering wheels, etc. Such trace DNA is easily transferred between individuals and objects. Studies have shown that in addition to primary transfer due to direct contact, trace DNA can also be indirectly transferred in secondary and tertiary transfer steps which do not require direct contact. Nitrile gloves …

Zoo Communication: A Study Of Stewardship With Animal Conservation In Zoos Across The United States, Abby Rachelle Lester

Graduate Theses, Dissertations, and Problem Reports (ETD)

This thesis investigates the communication strategies employed by zoo professionals to promote engagement and advanec animal conservation education. Through in-depth interviews with zoo experts, the stidy explores the intricate connections between communication practices and stewardship princliples within zoo facilities. Findings from this study contribute to the understanding of effective communication in the realm of animal conservation, with implications for both zoo practitioners and conservation educators. The study delves into the effective strategies for identifying and fostering relationships with environmental stewards, alongside encouraging their involvement in zoo-based animal conservation initiatives. The theoretical implications highlight gaps in existing models, emphasizing the need …

Machine Learning And Rna Bioinformatics, Jason Rafe Miller

Graduate Theses, Dissertations, and Problem Reports (ETD)

The applied science of bioinformatics encompasses computational analysis of molecular biology data. Advances in genomics and DNA sequencing technology have enabled computational analysis of ribonucleic acids (RNAs), which play diverse and critical roles in most cells. To assist the study of human RNA, we trained machine learning models on RNA nucleotide sequences, devoid of domain knowledge. We built models that distinguish long non-coding lncRNA from protein-coding mRNA, and models that predict the cytoplasmic vs. nuclear preferences of lncRNAs. In a review of published lncRNA subcellular localization classifiers, we show that the commonly used validation protocol generates optimistic performance measures, and …

Formulation, Sensory Evaluation, And Physicochemical Assessment Of And Consumer Behavior Toward Novel Energy Bars, Ian Phillip Israelsen

Graduate Theses, Dissertations, and Problem Reports (ETD)

The objectives of this study were to 1) formulate a novel energy bar containing significant macronutrients and calories per serving with favorable ratings from consumers; 2) analyze responses to a consumer preference survey and sensory evaluation of novel energy bars compared to a commercially available energy bar. For the first study, fourteen iterations of an energy bar were synthesized with differing protein sources (whey, soy, pea, hemp), and characteristic variations (nougat, chocolate truffle, peanut butter, double-date caramel). A shortbread base, date caramel, and chocolate coating were included in every bar. Sensory evaluations determined that the most liked variation overall was …

Evaluating The Efficacy Of The Archaeal Proteasome To Alleviate Protein-Misfolding Retinopathy, Celine Brooks

Graduate Theses, Dissertations, and Problem Reports (ETD)

Nearly all neurodegenerative diseases (NDs) and some eye diseases are characterized by the presence of misfolded and aggregated proteins. The ubiquitin proteasome system (UPS) is responsible for degrading the majority of proteins including misfolded and aggregated proteins. However, in NDs the performance of the UPS is impaired, and this impairment partially comes from these protein aggregates inhibiting the proteasome. This inhibition leads to an accumulation of protein aggregates, more proteasomal inhibition, and fewer chaperones for newly synthesized proteins, triggering a collapse in proteostasis, which is thought to contribute to the pathogenesis of NDs. Consequently, stimulating proteasome function is being investigated …

Characterizing Prescribed Fire With Terrestrial Lidar In The New Jersey Pine Barrens, Samuel Rhule Stockton

Graduate Theses, Dissertations, and Problem Reports (ETD)

Prescribed burning has become a commonly used tool in the mitigation of wildfire, though monitoring the way it changes ecosystems has historically been a time-intensive process. Rapid change across ecosystems has necessitated advancements in remote sensing technologies to quantify the changes taking place. Single-scan terrestrial LiDAR scanning is one such method of monitoring these changes through the quantification of ecosystem structural characteristics. Acute disturbance events such as fire can transform the structure of an ecosystem, and by extension, change the way that ecosystem functions. The purpose of this study is to analyze the changes in vegetation density and distribution following …

Drosophila Parasitoids Go To Space: Unexpected Effects Of Spaceflight On Hosts And Their Parasitoids, Jennifer Chou, Johnny R. Ramroop, Amanda M. Saravia-Butler, Brian Wey, Matthew P. Lera, Medaya L. Torres, Mary Ellen Heavner, Janani Iyer, Siddhita D. Mhatre, Sharmila Bhattacharya, Shubha Govind

Publications and Research

While fruit flies (Drosophila melanogaster) and humans exhibit immune system dysfunction in space, studies examining their immune systems’ interactions with natural parasites in space are lacking. Drosophila parasitoid wasps modify blood cell function to suppress host immunity. In this study, naive and parasitized ground and space flies from a tumor-free control and a blood tumor-bearing mutant strain were examined. Inflammation-related genes were activated in space in both fly strains. Whereas control flies did not develop tumors, tumor burden increased in the space-returned tumor-bearing mutants. Surprisingly, control flies were more sensitive to spaceflight than mutant flies; many of their …

A Gis Tool For Optimal Forage Species Selection, David B. Hannaway, Christopher Daly, Michael D. Halbleib, Linda Brewer, Sophie Baur, Chelsea Clark, Emilie Krecklow, Scott Bassett

IGC Proceedings (1977-2023)

To determine appropriate forage species for US ecoregions, geographic information technologies (GIS) are being used to create climatic and soil factor maps. Excel spreadsheets and RStudio are used to create response functions of forage species to minimum and maximum temperature, annual precipitation, soil pH, soil salinity, and salinity. National forage data and expert opinion will evaluate quantitative tolerances, seasonal yield profiles, and pollinator suitability. These maps and agronomic and livestock use information will be shared with forage specialists and farmers to provide alternatives for improved perenniality, increased diversity, and system circularity. Future work will include development and evaluation of climate …

The Impact Of Changing Joining Rates On The Western Australian Sheep Flock, Kate Pritchett

Animal production and livestock research reports

Given the poor seasonal conditions and low prices experienced in 2023/24, the Western Australian (WA) sheep industry is experiencing a period of very poor industry sentiment often compared to that seen in the 1990’s following the collapse of the wool reserve price scheme.

These difficult times mean producers have had to make production decisions for their businesses which may have flow on effects for the entire state flock. One commonly discussed option by industry and consultants was to join less ewes to reduce the feed burden on farm and help mitigate losses due to low prices. This computer modelling aimed …

Loose Smut Of Barley And Its Management, Department Of Primary Industries And Regional Development, Western Australia

Grains and other field crops factsheets

The fungal disease loose smut of barley parasitises the host plant and produces masses of soot-like spores that infect the seed head, reducing the yield and quality of harvested grain.

Smut diseases are host specific, meaning that smut of one cereal crop will not infect others (for example, loose smut of barley does not infect wheat or oats).

In many cases grain receival points have low or zero tolerance of smut contaminated grain.

Identification Of Cellulose Synthase Structural Features Involved In Cellulose Synthesis Complex Formation, Jamie Lamkin

Open Access Dissertations

Cellulose is a microfibrillar polysaccharide component of plant cell walls and consists of bundles of β-1,4-linked glucan chains. In addition to being important for plant cell walls, cellulose is also used by humans for a variety of purposes such as biofuels and building materials. Cellulose is produced by the integral plasma membrane enzyme Cellulose Synthase (CESA) and multiple CESA proteins can combine to form a six-lobed rosette structure called a Cellulose Synthesis Complex (CSC). In seed plants CSCs appear to be hetero-oligomeric, comprising three different CESA isoforms. However some non-seed plants, such as the bryophyte Physcomitrium patens, can form …

Movement Behavior And Metapopulation Connectivity Of Stream Salamanders In Response To Disturbance Events, Kathryn M. Greene

Theses and Dissertations--Biology

Metapopulations are shaped by the dispersal between populations in a landscape. Disturbance events can disrupt this connectivity resulting in local population extinction. For my dissertation, I used a combination of empirical and theoretical techniques to examine dispersal in response to disturbance and assessed it’s population-level consequences. My research used capture-mark-recapture sampling techniques to evaluate stream salamander movement in response to (1) a supraseasonal drought and (2) mountaintop-removal-mining (MTR) and valley-filling (VF) and (3) agent-based simulation modeling to evaluate population extinction risk in response to varying dispersal and mortality rates.

First, I evaluated the effects of a supraseasonal drought, a severe …

Eliciting The Effect Free Roaming Cats Have On Native Hawaiian Wildlife Using Stable Isotope Analysis, Erin Salano

Theses and Dissertations--Biology

This study measured the concentration of the stable isotopes Carbon and Nitrogen within the tissues of free-roaming and indoor cats on the Hawai’ian islands. This study aimed to determine whether cats are consuming more human provisioned or wild food sources and whether their diet is having a negative impact on endemic species; with a focus on assessing impacts on conserved bird populations. We hypothesized that human provisioned food sources have higher levels of carbon due to the amount of corn fillers within them, while wild food sources are more Nitrogen rich. We found that indoor and feral cats sampled from …

Navigating Asynchronous Online Learning: The Impacts Of Active Learning And Assigned Group Work On Student Motivation, Belonging, And Inclusion, Shea Elisabeth Carr

Theses and Dissertations--Biology

Motivation, belonging, and inclusion are all critical factors for student success but can be difficult to support in asynchronous online courses. Active learning and required group work have been shown to increase student motivation in in-person and synchronous online courses, but little is known about their impact in online asynchronous settings. This dissertation aimed to 1) evaluate the effect of active learning on student motivation in an online asynchronous setting and 2) evaluate the impact of assigned group work on student motivation and perceptions of belonging and inclusion within the context of an online, asynchronous physiology laboratory course. It was …

Elucidating The Effect Of Jak/Stat Signaling On Initiation Of Individualization, Sepideh Dadkhah

Theses and Dissertations--Biology

The JAK/STAT pathway is renowned for its involvement in diverse cellular processes, yet its precise role in the later events of spermiogenesis needs to be clarified. Spermiogenesis unfolds in the testis, where synchronized spermatid development occurs within two somatic cyst cells before being released into the seminal vesicle. Prior to this release, spermatid bundles undergo individualization, where F-actin investment cones accumulate at the nuclei of elongated spermatids and move down the length of the interconnected cysts, stripping away excess organelles and cytoplasm, resulting in individual spermatids that are then coiled and released into the testis lumen. Individualization depends on JAK/STAT …