Life Sciences Commons^™

Surface Mining Interacts With Timber Harvesting To Facilitate The Invasion Of Woody Invasive Species In A Temperate Forest Of Central Appalachia, Usa, William Wittenbraker

Theses and Dissertations--Forestry and Natural Resources

Appalachian forests are subjected to various short- and long-term anthropogenic disturbances. Surface mining is among the most potent drivers of land use change in the Appalachian region, reducing native forest cover and causing landscape fragmentation. Furthermore, the ecological footprint of surface mining could be expanded to adjacent forests, and such spill-over effects may be exacerbated by in-situ forest disturbances such as timber harvesting. However, it remains elusive how these two disturbance agents may be compounded to degrade forest health and landscape integrity. One of the major threats to forest health in the Appalachian forests is the invasive species. Many woody …

Communicating Climate Change: Adaptive Silviculture In Central Appalachian Kentucky, Logan Baker

Theses and Dissertations--Forestry and Natural Resources

Climate change communication is an emerging field that requires a multidisciplinary understanding of both climate and social science. Communicating with underrepresented woodland owners about climate change, specifically climate change adaptation in forestry applications, necessitates appropriately adjusted approaches. In Central Appalachian Kentucky, outreach with underrepresented woodland owners on forest adaptation topics has not been examined in depth. The recent establishment of an Adaptive Silviculture for Climate Change research site in the University of Kentucky’s Robinson Forest has created an opportunity to generate regionally specific climate adaptation information for Appalachian Kentucky forests. It is imperative to investigate how best to approach communicating …

Dynamic Patterns Of Resource Selection In Northern Bobwhite Across The Annual Cycle In A Region With Poor Edaphic Conditions, Autumn S. Randall

Theses and Dissertations--Forestry and Natural Resources

Developing successful management strategies requires an understanding of how an organism's resource needs change over the course of its life cycle. For almost a century, northern bobwhite (Colinus virginianus) populations have been declining range-wide, mostly as a result of habitat loss and degradation. Resource selection studies conducted at coarse-temporal resolutions and in areas with fertile soils form the majority of current management recommendations for bobwhites. In this thesis, we quantified resource selection patterns for 1,302 bobwhites in a region with poor soil conditions with respect to several common management practices (fire, fallow fields, supplemental feeding, and brush management …

Manrrs Advisors And Their Perceptions Of Their Mentor Strategies, Dallas L. Cooks

Theses and Dissertations--Community & Leadership Development

Minorities in Agriculture Natural Resources and Related Sciences, also known as MANRRS, is an organization with chapters nationwide. Their main focus is to provide professional development, academic advancement, and networking to those in agriculture and related sciences. This research focuses on the advisors of MANRRS chapters across the country and at various institutions. Advisors were asked a series of questions through a Qualtrics survey about their mentor strategies with their students. Chapter Advisors were asked demographic, Likert Scale, and questions based on their personal MANRRS experience. As a result of the data, five research questions were answered. Chapter Advisors and …

Autism In Agricultural Education: A Case Study Of An Adolescent With Autism Spectrum Disorder And Their Parent On Career And Technical Education, Grace Miller

Theses and Dissertations--Community & Leadership Development

Autism spectrum disorder (ASD) is a unique and often misunderstood diagnosis. Little is known about the experiences of adolescents with ASD. As students with ASD graduate high school, many are under- and unemployed. Career and technical education (CTE) in U.S. schools is intended to prepare all students for careers post-secondary. Agricultural education is one of the predominate career clusters within CTE. This qualitative single case study sought to create a platform for both a student and their parent to share their experiences in agricultural education and CTE. Participants were an adolescent with ASD who had taken at least one year …

Development Of Functional Plasmonic Nanoceria For The Ultrasensitive Detection Of Ebola Glycoprotein, Carissa A. Sutton

Graduate Theses/Dissertations

Infectious diseases have been increasing in both severity and prevalence, leading to increasing economic burdens and health concerns. Ebola hemorrhagic fever is an infectious disease that is both highly communicable and highly fatal. Current detection methods for the virus have high specificity and sensitivity but have long and/or complicated procedures that do not allow for early virus detection in highly affected areas. Compared to the lengthy procedure of reverse transcription-polymerase chain reaction (RT-PCR), real-time RT-PCR is more time-efficient; however, specificity and sensitivity are reduced. Since early detection of the virus is the only way to increase survival rates, sensitive detection …

A Discrepancy In Discrepancy Scores? Comparing The Borich And Ranked Discrepancy Models For Determining Professional Development Needs, Donald M. Johnson, Will Doss, Chris Estepp, Henry O. Akwah, George W. Wardlow

Agricultural Education, Communications and Technology Faculty Publications and Presentations

The Borich (1980) model has been widely used to determine professional development (PD) needs of school-based agricultural education (SBAE) teachers over the past 40-plus years. However, recent criticism, primarily focused on a purported statistical issue, has led to development of the Ranked Discrepancy Model [RDM (Narine & Harder, 2021)] as a potential alternative. This article provides perspective on the statistical issue in question and compares the results of using the Borich model and the RDM to assess precision agriculture (PA) PD needs of Arkansas SBAE teachers (N = 44). Our quantitative results indicated the two models produced different PD …

Rapid Expansion Of The Limpkin Aramus Guarauna Across Anglo-America, A. Alam, R. Kaddoura, J. Jackson, R. Kannan

Journal of the Arkansas Academy of Science

We quantitatively document and describe the recent rapid expansion of the Limpkin Aramus guarauna across Anglo-America (United States and Canada). Using data downloaded from eBird (www.eBird.org), we present graphs showing the explosive growth in reports of number of individual birds and frequencies in checklists for this species in several parts of Anglo- America outside Florida (its traditional Anglo- American range). We also provide geographic progression maps to illustrate the expansion through time (2013-2023) and furnish qualitative information on foods consumed by the bird in new areas, based on a survey of 274 images uploaded by citizen scientists in eBird. Possible …

Geographical Variation In Songs Of Bachman’S Sparrow (Peucaea Aestivalis), L. Nguyen, K. Doñas, J. Jackson, R. Kannan

Journal of the Arkansas Academy of Science

We present an analysis of geographic variation in primary song components of the Near Threatened North American endemic, Bachman’s Sparrow (Peucaea aestivalis). These songs have 2 distinct portions: an introductory tweet we call the "whistle" and a more complex second portion that we call the "trill". We analyzed 327 songs from 111 recordings downloaded from eBird.org from the entire current range of the species. We grouped the recordings into 3 distinct geographic clusters, East, Central, and West. The data measured from spectrograms suggest a significant statistical difference among groups for 3 measured characteristics: frequency range of trill, number of horizontal …

A Review Of Herpetofaunal Distributions In Arkansas With Special Emphasis On Contributions From Citizen Science: Part I – Snakes, R. Jacobs, N. Ortiz, J. Jackson, J.D. Willson, K.G. Roberts, R. Kannan

Journal of the Arkansas Academy of Science

We present a comprehensive updated review of the distributions of the 38 species of snakes in Arkansas. We compare historical and current distributions with citizen science data uploaded and verified in iNaturalist, a leading biodiversity monitoring online citizen science database. The Arkansas Herpetological Atlas, a website maintaining species occurrence records, is also used and compared. We highlight the role played by iNaturalist in enhancing our knowledge of snake distributions in Arkansas. 10,885 verified and vetted Research Grade (RG) observations of Arkansas snakes have been recorded in iNaturalist, expanding the known distributions of 36 of the 38 species. This is the …

Energy Content Of Acorns Of Shinnery Oak (Quercus Havardii) In The Diet Of Scaled Quail (Callipepla Squamata) In Southeastern New Mexico, J.L. Hunt, M.E. Grilliot, T.L. Best, D. Lozano-Lopez, E.R. Neilson, I.C. Castillo

Journal of the Arkansas Academy of Science

Shinnery oak (Quercus havardii) is a deciduous, low-growing shrubby tree that is a dominant plant in large areas of grassland in western Oklahoma, the Texas Panhandle, and eastern New Mexico. Acorns of the plant are important food items for many wildlife species, including scaled quail (Callipepla squamata), mourning doves (Zenaida macroura), and endangered lesser prairie-chickens (Tympanuchus pallidicinctus). We analyzed the energy content of acorns of shinnery oak obtained from the crops of scaled quail collected from plains-mesa sand-scrub in Lea and Eddy counties, New Mexico. Acorns were removed from crops and dried for 48 hours at 60°C to remove moisture …

An Investigation Into Splicing Variation And Expression Patterns Of Insulin-Like Peptide 4 (Ilp4) Within The Drosophila Genus, Zachary C. Griffith

Theses and Dissertations

The insulin-signaling pathway plays a crucial role in regulating metabolic homeostasis in both humans and insects. Dysregulation or mutation within this pathway can lead to various diseases, such as diabetes mellitus and insulin resistance. The insulin-like peptide 4 (ILP4) in Drosophila is an interesting subject for study due to its similarity to mammalian insulin and its role in regulating sugar metabolism. In this study, we investigate a novel splicing variation within the Drosophila takahashii Insulin-Like Peptide 4 (ILP4) gene. Our investigation identified a splicing variation found in four Drosophila species that introduces an additional codon in one isoform, resulting in …

Optimizing Z/R Relationship For Radar-Based Precipitation Estimates, Jalon Gary

Theses and Dissertations

Z/R relationship is a power law relationship between radar reflectivity (Z) and rainfall rate (R). The relationship is expressed as Z = aRb where a and b are correlated with drop size distribution (DSD) and vary across locations. Using a Z/R relationship to translate radar reflectivity to rainfall rate can allow for real-time precipitation monitoring with a high temporal and spatial resolution. A dataset of 12 cases in Georgia from December 2021 to November 2022 was examined using the Georgia Weather Network rain gauge system and the KFFC radar to optimize the best Z/R relationship for each case. Radar-based precipitation …

Advancing Explainability In Multi-Label Classification For Tomato Disease Detection Using Machine Learning Interpretability Techniques, Md. Nurullah

Theses and Dissertations

Plant diseases pose a significant threat to global food security, affecting crop yield, quality, and overall agricultural productivity. Traditionally, diagnosing plant diseases has relied on timeconsuming visual inspections by experts, which can often lead to errors. With the rapid growth of technology, machine learning (ML) and artificial intelligence (AI) have opened new possibilities for automating this process. One of the most promising technologies for plant disease diagnosis is Convolutional Neural Networks (CNNs), which have proven effective in image classification tasks. Plant leaves, often exhibiting symptoms such as discoloration and irregular textures, serve as key indicators for disease detection. By processing …

From Grain To Malt: Tracking Changes Of Ultra-Low-Gluten Barley Storage Proteins After Malting, Mahya Bahmani, Angéla Juhász, Utpal Bos, Mitchell G. Nye-Wood, Malcolm Blundell, Crispin A. Howitt, Michelle L. Colgrave

Research outputs 2022 to 2026

Barley (Hordeum vulgare L.) is a major cereal crop produced globally. Hordeins, the major storage proteins in barley, can trigger immune responses leading to celiac disease or symptoms associated with food allergy. Here, proteomics approaches were employed to investigate the proteome level changes of grain and malt from the malting barley cultivar, Sloop, and single-, double- and triple hordein-reduced lines. The triple hordein-reduced line is an ultra-low gluten barley cultivar, Kebari®. Using discovery proteomics, 2,688 and 3,034 proteins in the barley and malt samples were detected respectively. Through the application of targeted proteomics, a significant reduction in the quantity …

Effect Of Bioactive Borate Glass On Printability And Physical Properties Of Hydrogels, Fateme Fayyazbakhsh, Mehedi H. Tusar, Yue-Wern Huang, Ming C. Leu

Mechanical and Aerospace Engineering Faculty Research & Creative Works

Hydrogels are a key component in bioinks and biomaterial inks for bioprinting due to their biocompatibility and printability at room temperature. The research described in the present paper contributes to the advancement of bioprinting by studying the effect of bioactive borate glass (BBG) incorporated into hydrogels on printability and physical properties. In this study, we fabricated 3D-printed hydrogel scaffolds using gelatin and alginate hydrogel mixture incorporated with various amounts of BBG, a bio ceramic rich in therapeutic ions including boron, calcium, copper, and zinc. We investigated the effect of incorporating BBG on the density, viscosity, physical interactions, chemical structure, and …

South America Holds The Greatest Diversity Of Native Daisies (Asteraceae) In The World: An Updated Catalogue Supporting Continental-Scale Conservation, Andrés Moreira-Muñoz, Marcelo Monge, Mariana A. Grossi, Fabio Andrés Ávila, Vanezza Morales-Fierro, Gustavo Heiden, Berni Britto, Stephan Beck, Jimi N. Nakajima, Vanina G. Salgado, Juan Facundo Rodríguez-Cravero, Diego G. Gutiérrez

Publications and Research

Asteraceae is the world’s richest plant family and is found on all continents, in environments ranging from the coast to the highest mountains. The family shows all growth forms and, as in other angiosperm families, species richness is concentrated in tropical regions. South America has the highest diversity of Asteraceae in the world, yet taxonomic and distributional knowledge gaps remain. This study compiles an updated catalog of Asteraceae native to South America, based on national and regional checklists and ongoing large-scale flora projects. The resulting checklist includes a total of 6,940 species and 564 genera native to South America to …

Here Come The Test Results: An Analysis Of Games In Experimental Design For Neuroscience Research, Madison Mcdougall

Scripps Senior Theses

A large part of experimental design in neuroscience revolves around the tasks that are designed for participants to complete to understand the complex system that is the brain. However, as Alan Newell pointed out in his 1973 paper, “You can’t play 20 questions with nature and win,” as designed tasks often answer a binary question that limits their contribution to understanding the brain as a system or a “genuine slab of human behavior.” Games provide an apt solution to this problem, as their complexity embodies a naturalistic task while their well-defined rules create a robust experimental system. Video games specifically …

Female Titin Mutant Mice Outperform Young And Old Males, Reese Ger

Scripps Senior Theses

Exercise performance is widely believed to generally be maximal among young males. However, little research has been conducted to investigate the impact of sex or age on muscle performance. This study investigated the effects of sex and age on forelimb and all limb grip strength performance in wildtype and titin mutant mice. Titin is the largest known protein, with known involvement in muscle function. The mice in this study were Ttn∆112-158 with a 75% deletion to the PEVK region of titin. Based on limited existing research, we hypothesized that wildtype mice would outperform all Ttn∆112-158 mice, males would outperform females …

Hamstring And Quadriceps Activation During Single Leg Hopping At Varying Frequencies: Electromyography Analysis, Jemma Bosselman

Scripps Senior Theses

Identification of knee motor control strategy is salient both for biomechanical understanding of the lower limb and for medical applications. Integral to knee function are the quadriceps and hamstring, an antagonistic muscle pair. Sub-optimal relative activation of the pair can increase injury potential. Muscle activation patterns are largely activity specific, necessitating muscle control research across various tasks. Single leg hopping has been sparsely studied, particularly for muscle activation in relation to hopping frequency. This project thus aimed to determine the effect of single leg hopping frequency on quadriceps and hamstring activation using surface electromyography (EMG), with the vastus lateralis (VL) …

Investigation Of Setmelanotide, An Mc4r Agonist, For Obesity In Individuals With Smith-Magenis Syndrome, Julia Lazareva, Stephanie R Sisley, Sheila M Brady, Ann C M Smith, Sarah H Elsea, Jeremy J Pomeroy, Christian L Roth, Jennifer E Sprague, Martin Wabitsch, Jill Garrison, Jack A Yanovski

Children’s Nutrition Research Center Staff Publications

Background: Smith Magenis Syndrome (SMS) is a rare genetic disorder caused by RAI1 haploinsufficiency. Obesity in people with SMS is believed partially due to dysfunction of the proximal melanocortin 4 receptor (MC4R) pathway. We therefore studied effects of treatment with the MC4R agonist setmelanotide on obesity and hunger, as well as metabolic, cardiac and safety, in individuals with SMS.

Methods: People with SMS received once-daily setmelanotide injections, with the dose titrated bi-weekly to a maximum of 3 mg over ∼1 month; and a full-dose treatment duration of 3mo. The primary outcome was percent change in body weight. Secondary outcomes included …

Characterizing The Effects Of Melatonin On Reproduction In Green Anoles (Anolis Carolinensis)., Nicholas T. Shankey

All Graduate Theses, Dissertations, and Other Capstone Projects

Melatonin is a naturally occurring hormone that is involved in the regulation of seasonal behaviors in a variety of species. Specifically, high levels of melatonin are associated with short photoperiods, which often coincide with the non-breeding season in most animals, meaning that melatonin may have an inhibitory role in regulating seasonal reproduction. To exert effects on different target tissues, melatonin must bind to its receptors (MT1 and MT2). Like other seasonally breeding animals, green anole lizards (Anolis carolinensis), have large, active gonads, increased levels of testosterone and estradiol, and increased reproductive behaviors during the breeding season compared to the non-breeding …

Differential Photosynthetic Yield And Accumulated Degree Day Estimation For Parrotfeather (Myriophyllum Aquaticum) To Determine Invasive Potential In The Midwest, United States, Alyssa Anderson

All Graduate Theses, Dissertations, and Other Capstone Projects

Thank you to the Aquatic Plant Management Society (APMS) and affiliated chapters for funding this project. I would like to thank Mississippi State University for sending my source parrotfeather for propagation throughout the course of this project. Thank you to Jenna Eklund, Allison Squires, Thomas Zellmer, Justin Kjorness, and others in the Weed Science lab for their assistance. Finally, I would like to extend my thanks and gratitude to my committee members: Ryan Wersal, PhD, Christopher Ruhland, PhD, and Gray Turnage, PhD for their everlasting support and guidance throughout this project.

Assessing The Nutritional Quality And Fate Of Saginaw Bay Dreissenid Mussel Veligers, Mitch R. Kehne

Dissertations, Master's Theses and Master's Reports

The introduction and establishment of dreissenid species including zebra (Dreissena polymorpha) and quagga (D. bugensis) mussels into the Laurentian Great Lakes has resulted in significant biological and ecological change over the past 30 years. Much of the current research completed to date on understanding dreissenid mussel impacts in the Great Lakes has primarily focused on the adult life stages with less known about the larval veliger form. The goals of this thesis were to; i) investigate veliger energy densities and fatty acid profiles to compare and contrast these nutritional metrics against pelagic zooplankton and; ii) determine …

Epi- And Genomic Assessments Of Stamp Sand Toxicity And Population Structure Of Lake Superior Lake Trout (Salvelinus Namaycush) And Whitefish (Coregonus Clupeaformis), John C. Mccall

Dissertations, Master's Theses and Master's Reports

Native Lake Superior salmonid conservation is a notable success, as the only Great Lake with stable lake trout (LT) and whitefish fisheries (LWF). To quantify toxicity to LT and LWF from legacy pollution by mine tailings at Buffalo Reef in the Keweenaw Peninsula and assess their genetic structure across U.S. waters, I used reduced representation bisulfite sequencing and genotyped ~750 fishes from Buffalo Reef and Lake Superior. ~200-300 epigenetic marks in Buffalo Reef LT and LWF indicated dysregulation of pathways related to DNA damage, immune response, stress, and metabolism, relative to Lake Huron and Michigan outgroups. Population genomic analyses showed …

Divergent Response To Anthropogenic Change Within The Songbird Taxon: Insights From The Range Expansion Of The Northern Cardinal And Mitigation Mechanisms For Migratory Bird-Building Collisions, Jenna Brewer

Dissertations, Master's Theses and Master's Reports

Anthropogenic activities have impacted ecosystems across the globe. However, wildlife species have exhibited heterogenous responses to these novel changes, with some species experiencing population growth, and others succumbing to population decline. I studied examples of both within the songbird taxon, focusing on drivers of range expansion in the Northern Cardinal and acoustic mitigation mechanisms for migratory bird-building collisions, a source of decline for many songbird species. I found that the Northern Cardinal’s range was primarily a function of climatic stress, which was supported by the modulation of the molt process across latitudes. Specifically, Northern Cardinals exhibited faster feather growth rates …

Physical Activity And Mental Health Symptoms In Adults, Olivia A. Brecht

Graduate Research Papers

The primary purpose of this research study was to analyze the effect of physical activity on the mental health of adults aged 18-80. Existing research has found a significant relationship between physical activity and mental health in adulthood. The current study utilizes secondary data from the 2019 Behavioral Risk Factor Surveillance System (BRFSS). The target population for the BRFSS study consists of noninstitutionalized adults (aged 18 and older) currently living in the United States. Using SPSS, the current study conducted univariate data analysis and bivariate data analysis. This study investigates various factors including the number of poor mental health days, …

Contribution Of The Transcription Factor Red Nac To Low Nitrogen Phenotypes In Poplar, Shane Alexander Spence

Dissertations, Master's Theses and Master's Reports

Greenhouse grafting and field trials were conducted to examine the contribution of the RED NAC transcription factor on low nitrogen phenotypes in hybrid poplar (P. tremula x P. alba). Reciprocal grafting trials showed both root and shoot expression contribute to phenotype under low nitrogen conditions, and shoot expression has a leading role in contribution to low-nitrogen phenotype. The impact of RED NAC expression level on auxin polar transport was investigated using a DR5::GUS auxin-responsive reporter gene line as rootstock for RED NAC modified scions. Pilot studies indicate the rate of auxin transport from apex to roots is slower through shoots …

Autonomic Modulation Of Cardiac Function In Hypertrophic Cardiomyopathy, Jenna Rose Disser

Dissertations, Master's Theses and Master's Reports

Hypertrophic cardiomyopathy (HCM) is the most common genetic heart disorder. HCM is characterized by cardiac hypertrophy, fibrosis, and an increased risk of fatal arrhythmias and sudden cardiac death. Previous studies in humans with HCM have demonstrated increased cardiac norepinephrine spillover and reduced beta-1 receptor (β1R) expression in the left ventricle (LV). We have previously demonstrated that cardiac sympathetic tone is elevated in an alpha-tropomyosin mutant mouse model of HCM. We hypothesized that HCM mice would demonstrate reduced β1R expression in the LV and attenuated heart rate (HR) and dP/dt max responses to ramped infusion of the β1R agonist, dobutamine. …

Density And Abundance Estimation Of West Indian Manatee, Trichechus Manatus, Between The States Of Ceará And Piauí, Northeast Brazil, Using Active Acoustics, Katherine Fiedler Choi Lima, Denis Moledo De Sousa Abessa, Daniel Gonzalez-Socoloske, Renata Sousa-Lima, Ana Carolina Oliveira De Meirelles, Cristine Pereira Negrão Silva

Faculty Publications

The West Indian manatee is one of the most threatened species in Brazil. The species has currently a patchy distribution from the state of Alagoas to the state of Amapá. The difficulty of observing manatees, especially in estuarine waters, is a challenge for conservation. Therefore, it is necessary to use new methodologies and technologies to solve manatee detection problems in their natural habitats. The goal of this study was to use an active acoustic method of detection to estimate manatee density and abundance in the estuarine complex of the Timonha and Ubatuba rivers, between the states of Ceará and Piauí, …