Life Sciences Commons^™

Imitating The “Breeder’S Eye”: Predicting Grain Yield From Measurements Of Non-Yield Traits, Hongyu Jin, Michael C. Tross, Ruijuan Tan, Linsey Newton, Ravi V. Mural, Jinliang Yang, Addie M. Thompson, James C. Schnable

Department of Agronomy and Horticulture: Faculty Publications

Plant breeding relies on information gathered from field trials to select promising new crop varieties for release to farmers and to develop genomic prediction models that can enhance the efficiency of genetic improvement in future breeding cycles. However, generating the genetic marker data required to apply genomic prediction at the early stages of a breeding program remains costly for many public-sector breeding programs as well as for many plant breeders operating in developing countries. As the pace of climate change intensifies, the time lag of developing and deploying new crop varieties requires plant breeders to make selection decisions without knowing …

Soil Testing: Commercial Plant Tissue Submission Form, Shyloh Favreau

UNH Cooperative Extension

No abstract provided.

Soil Testing: Commercial Fruit Submission Form, Shyloh Favreau

UNH Cooperative Extension

No abstract provided.

Effects Of Diminazene Aceturate On Drosophila Melanogaster: A Lipidomic Analysis, Gabriela Suarez

USF Tampa Graduate Theses and Dissertations

Pesticides are agents designed to eradicate living organisms to preserve agricultural needs.¹ Today the most commonly used pesticides are termed “modern pesticides”, they are characterized by lower lipophilicity and limited stability, making them less time persistent in the environment. Among these modern pesticides are organophosphorus, urea, phenoxy alkanoic, triazine, chloroacetanilide, and glyphosate-based pesticides.² The issue faced with most of these pesticides is that they affect more than just the targeted pest and pose a danger to not only humans, but also entire ecosystems.^1,3,4 While there are many different types of pesticides, insecticides show the most variance and …

Will Saf Turbocharge The Corn Ethanol Market?, Richard K. Perrin, Lilyan E. Fulginiti, Felipe Miranda De Souza Almeida

Cornhusker Economics

The long-run outlook for the corn ethanol industry is questionable, due to a transition to electric and hybrid vehicles. One source of hope for the long run is the potential demand for producing Sustainable Aviation Fuel (SAF). SAF is a key component in the United States Aviation Climate Action Plan, a path to net-zero greenhouse gas (GHG) emissions in the aviation industry by 2050. Demand for ethanol for SAF offers hope to the ethanol industry, but it depends a great deal on policy decisions that are being made now. Here we sketch out this story.

Based on the information available …

Pollen-Mediated Gene Flow From Herbicide-Resistant Yellow Corn To Non-Genetically Engineered Food-Grade White Corn, Mandeep Singh, Vipan Kumar, Stevan Z. Knezevic, John L. Lindquist, Suat Irmak, Santosh Pitla, Amit J. Jhala

Department of Agronomy and Horticulture: Faculty Publications

Nebraska is the number one producer of food-grade white corn in the United States. Pollen-mediated gene flow (PMGF) from genetically engineered high alpha-amylase corn, known as Enogen corn, to food-grade white corn can have undesirable outcomes. Alpha-amylase can convert starch in white corn to sugar during or after its processing, degrading the quality of processed products. Thus, proximity to Enogen corn puts white corn production at risk. The objectives of this study were to evaluate the PMGF from herbicide-resistant yellow corn to food-grade white corn and assess the significance of wind speed and direction. Field experiments were set up using …

Case Studies On Biomedical Innovation Systems In Major Countries, Xiaoling Ma

Bulletin of Chinese Academy of Sciences (Chinese Version)

The study focuses on the basic research, technological breakthroughs, transformation and commercialization of representative biomedical innovations over the past century—including penicillin, artemisinin, monoclonal antibodies, tumor immunotherapy, adenoviral gene therapy, mRNA vaccines, CRISPR/Cas9 gene editing, etc.—adopting a “dissecting the sparrow” case study methodology to conduct in-depth analyses (“double-clicking”) of each breakthrough, thereby mapping the institutional architectures and performance outcomes of national biomedical innovation systems and achieving a “seeing both trees and forest” perspective. Through comparative analysis, it reveals that the United States, compared with the United Kingdom, Japan, Germany and China, has developed a smooth technology transfer system and a mature …

Developing New Agricultural Productivity And Empowering High-Quality Agricultural Development, Yafei Yan, Junhui Cui

Bulletin of Chinese Academy of Sciences (Chinese Version)

New quality productivity represents an advanced form of productivity, and it plays a leading role in innovation. The acceleration of new agricultural productivity formation and development is essential for fostering high-quality agricultural growth in China. However, there are also several challenges, such as limited natural resources, technological bottlenecks, shortage of agricultural professionals, outdated production methods, and imperfect systems and mechanisms. This study suggests that strengthening the protection of the ecological “trinity” of cultivated land quantity and quality to ensure food security; accelerating the development of agricultural technological innovation to enhance industry efficiency; innovating agricultural production methods to promote the green …

Biological Control Of Three Major Cucumber And Pepper Pests: Whiteflies, Thrips, And Spider Mites, In High Plastic Tunnels Using Two Local Phytoseiid Mites, Yusuf Abou Jawdah, Nour Ezzedine, Aya Fardoun, Samer Kharroubi, Hana Sobh, Hagop S. Atamian, Margaret S. Skinner, Bruce Parker

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

To enhance food security, food safety, and environmental health, a bio-based integrated pest management (BIPM) strategy was evaluated at two coastal locations in Lebanon as an alternative to toxic pesticide sprays in commercial high-arched plastic tunnels common in many countries. The evaluation occurred during two cucumber and pepper cropping seasons: spring and fall. At each site, two commercial tunnels were used; farmers’ conventional practices were applied in one tunnel, while the BIPM approach was followed in the second tunnel. In the farmers’ practices, a total of 14 sprays of insecticide/acaricide mixtures were applied during the spring growing season, and 6 …

Prediabetes And Associated Risk Of Cardiovascular Events And Chronic Kidney Disease Among Adult Survivors Of Childhood Cancer In The St Jude Lifetime Cohort, Stephanie B Dixon, Fang Wang, Lu Lu, Carmen L Wilson, Daniel M Green, Deo Kumar Srivastava, Rebecca M Howell, John L Jefferies, Leslie L Robison, Kirsten K Ness, Melissa M Hudson, Wassim Chemaitilly, Gregory T Armstrong

Faculty, Staff and Student Publications

Purpose: Little is known about the prevalence of prediabetes and associated risk of cardiovascular events and chronic kidney disease (CKD) with this reversable condition in survivors.

Methods: Prevalence of prediabetes (fasting plasma glucose 100-125 mg/dL or hemoglobin A1c 5.7%-6.4%) and diabetes was clinically assessed in 3,529 adults ≥5 years from childhood cancer diagnosis and 448 controls stratified by age. Cox proportional hazards regression estimated progression from prediabetes to diabetes, and risk of future cardiac events, stroke, CKD, and death.

Results: Among survivors, median age 30 years (IQR, 18-65), and the prevalence of prediabetes was 29.2% (95% CI, 27.7 to 30.7) …

Epigenetic Modulators Link Mitochondrial Redox Homeostasis To Cardiac Function In A Sex-Dependent Manner, Zaher Elbeck, Mohammad Bakhtiar Hossain, Humam Siga, Nikolay Oskolkov, Fredrik Karlsson, Anna Walentinsson, Rebecca Jarvis, Roland Bürli, Tanguy Jamier, Elske Franssen, Mike Firth, Andrea Degasperi, Claus Bendtsen, Robert I Menzies, Katrin Streckfuss-Bömeke, Michael Kohlhaas, Alexander G Nickel, Lars H Lund, Christoph Maack, Ákos Végvári, Christer Betsholtz

Faculty, Staff and Student Publications

While excessive production of reactive oxygen species (ROS) is a characteristic hallmark of numerous diseases, clinical approaches that ameliorate oxidative stress have been unsuccessful. Here, utilizing multi-omics, we demonstrate that in cardiomyocytes, mitochondrial isocitrate dehydrogenase (IDH2) constitutes a major antioxidative defense mechanism. Paradoxically reduced expression of IDH2 associated with ventricular eccentric hypertrophy is counterbalanced by an increase in the enzyme activity. We unveil redox-dependent sex dimorphism, and extensive mutual regulation of the antioxidative activities of IDH2 and NRF2 by a feedforward network that involves 2-oxoglutarate and L-2-hydroxyglutarate and mediated in part through unconventional hydroxy-methylation of cytosine residues present in introns. …

Understanding Heterogeneity In Individual Responses To Digital Lifestyle Intervention Through Self-Monitoring Adherence Trajectories In Adults With Overweight Or Obesity: Secondary Analysis Of A 6-Month Randomized Controlled Trial, Shiyu Li, Yan Du, Hongyu Miao, Kumar Sharma, Chengdong Li, Bradley Brimhall

Faculty, Staff and Student Publications

Background: Achieving clinically significant weight loss through lifestyle interventions for obesity management is challenging for most individuals. Improving intervention effectiveness involves early identification of intervention nonresponders and providing them with timely, tailored interventions. Early and frequent self-monitoring (SM) adherence predicts later weight loss success, making it a potential indicator for identifying nonresponders in the initial phase.

Objective: This study aims to identify clinically meaningful participant subgroups based on longitudinal adherence to SM of diet, activity, and weight over 6 months as well as psychological predictors of participant subgroups from a self-determination theory (SDT) perspective.

Methods: This was a secondary data …

Summit-Fa: A New Resource For Improved Transcriptome Imputation Using Functional Annotations, Hunter J Melton, Zichen Zhang, Chong Wu

Faculty, Staff and Student Publications

Transcriptome-wide association studies (TWAS) integrate gene expression prediction models and genome-wide association studies (GWAS) to identify gene-trait associations. The power of TWAS is determined by the sample size of GWAS and the accuracy of the expression prediction model. Here, we present a new method, the Summary-level Unified Method for Modeling Integrated Transcriptome using Functional Annotations (SUMMIT-FA), which improves gene expression prediction accuracy by leveraging functional annotation resources and a large expression quantitative trait loci (eQTL) summary-level dataset. We build gene expression prediction models in whole blood using SUMMIT-FA with the comprehensive functional database MACIE and eQTL summary-level data from the …

Bayesian Hierarchical Modelling Of Size Spectra, Jeff S. Wesner, Justin P.F. Pomeranz, James R. Junker, Vojsava Gjoni

Michigan Tech Publications

A fundamental pattern in ecology is that smaller organisms are more abundant than larger organisms. This pattern is known as the individual size distribution (ISD), which is the frequency distribution of all individual body sizes in an ecosystem. The ISD is described by a power law and a major goal of size spectra analyses is to estimate the exponent of the power law, λ. However, while numerous methods have been developed to do this, they have focused almost exclusively on estimating λ from single samples. Here, we develop an extension of the truncated Pareto distribution within the probabilistic modelling language …

Photodegradation Stability Of Huminated European Pine (Pinus Sylvestris L.) Microveneers, Reza Hosseinpourpia, Amir Ghavidel

Michigan Tech Publications

Humins are heterogeneous and polydisperse furanic macromolecules derived from sugar biorefinery. Improving wood properties by humination has become of interest recently. This study examined the photodegradation stability of European pine sapwood microveneers modified with humins at different concentrations of citric acid (CA) and succinic acid (SA) as reaction catalysts, e.g., 1.5 %, 3 %, and 4.5 % wt.%. The photostability of huminated wood was assessed after 48 h, 96 h, and 144 h of exposure to the accelerated weathering test by means of mass loss and finite-span tensile strength. The results were compared with unmodified and also unweathered samples. The …

Soil Testing: Corn, Forage, Pasture & Hay Submission Form, Shyloh Favreau

UNH Cooperative Extension

No abstract provided.

Soil Testing: Commercial Field Nursery Submission Form, Shyloh Favreau

UNH Cooperative Extension

No abstract provided.

Soil Testing: Christmas Tree Submission Form, Shyloh Favreau

UNH Cooperative Extension

No abstract provided.

Exploring Neuroplasticity Changes In Neurotoxin-Induced Parkinson’S Disease: A Preliminary Analysis Using Transcranial Magnetic Stimulation, Tomas Gomez Jr., Daniel Salinas, Kelsey Potter-Baker, Nawaz Hack, Ramu Vadukapuram

Research Symposium

Background: Parkinson’s disease (PD) is a neurodegenerative condition that affects movement, cognition, gait, and significantly impacts one's quality of life. Studies have suggested that neurotoxin pre-exposure is related to PD pathology and progressive motor/non-motor deficits, though it remains unclear how neurotoxin exposure affects neuroplasticity. The present study aimed to examine neurotoxin–induced PD-associated neuroplasticity changes in relationship to mental acuity and PD motor functionalities.

Methods: 7 voluntary participants experiencing early-stage PD symptoms with self-reported neurotoxin pre-exposure were enrolled in the longitudinal, repeated-measures clinical study; 2 sex-matched, age-matched, and occupation-matched healthy subjects were recruited for controlled comparative analysis (n=9). UTRGV’s Institute …

Examining Cetp Gene Associated With Ad-Related Diseases Of The Hispanic Population In The Rio Grande Valley., Erika Guajardo, Luis Aguillon, Daniela Ollervides-Charles, Kesheng Wang, Gladys Maestre, J. Garza, Chun Xu

Research Symposium

Background: There are currently about 6 million people in the United States that suffer from Alzheimer’s Disease (AD) and Alzheimer’s Disease related dementia (ADRD). It is a progressive disease beginning with mild memory loss and possibly leading to loss of the ability to carry on a conversation and respond to the environment. Over time, these conditions can cause many different health issues that decrease the quality of life. In addition, Hispanic people are twice as likely to develop AD or AD related dementia than non-Hispanic White people. In our study, we are investigating a known gene, CETP, that directly corresponds …

Diosgenin Prevents Breast Cancer Metastasis Via The Inhibition Of Epithelial-Mesenchymal Transition., Santosh K. Singh, Rajesh Singh

Research Symposium

Background: Globally, breast cancer (BrCa) is the primary cause of cancer-related morbidity and death in women. Despite significant changes in healthcare activities like screening and early detection over the past few decades, African Americans (AA) continue to experience cancer health disparities. Many studies have been done on BrCa treatments, but AA patients have had less success than other racial or ethnic groups. Therefore, novel strategies are required to improve survival rates, lower BrCa mortality, and ultimately enhance the health of racial/ethnic minorities. Current treatment regimens, such as chemotherapeutic agents, are showing less effectiveness since they are linked to drug resistance, …

Implementing Meta-Session Autoregulation Strategies For Exercise- A Scoping Review, Adam Ibrahim, Cory T. Beaumont, Kelley Strohacker

International Journal of Exercise Science

International Journal of Exercise Science 17(5): 382-404, 2024. Meta-session autoregulation, a person-adaptive form of exercise prescription that adjusts training variables according to daily fluctuations in performance considering an individual’s daily fitness, fatigue, and readiness-to-exercise is commonly used in sports-related training and may be beneficial for non-athlete populations to promote exercise adherence. To guide refinement of meta-session autoregulation, it is crucial to examine the existing literature and synthesize how these procedures have been practically implemented. Following PRIMSA guidelines a scoping review of two databases was conducted from August 2021 to September 2021 to identify and summarize the selected measures of readiness-to-exercise …

Maximal Aerobic Capacity As A Predictor Of Performance On Acft Total Score Of Rotc Cadets, Anthony M. Acevedo, Zachary Zeigler, Bridget F. Melton

International Journal of Exercise Science

International Journal of Exercise Science 17(4): 429-437, 2024. The Army Combat Fitness Test (ACFT) is a newly developed test that assesses the combat readiness of U.S. Army soldiers. The purpose of this cross-sectional study is to determine if VO_2max can predict performance outcomes of the ACFT in ROTC cadets. This understanding can provide a better understanding of the aerobic demands of the ACFT. Cadets (50 males, 14 females; aged 21.43 ± 4.10 years) completed the 6-event ACFT (maximum trap-bar deadlift [MDL], standing power throw [SPT], hand-release pushups [HRPU], sprint-drag-carry shuttle run [SDC], plank [PLK], and 2-mile run [2MR]). The …

Influence Of Body Composition On Functional Movement Among Police Officers, Stacy L. Gnacinski, Frankie Porter, Madison N. Renner, Tessa Laska

International Journal of Exercise Science

International Journal of Exercise Science 17(4): 418-428, 2024. Research indicates that the Functional Movement Screen (FMS) can be used to measure functional movement quality and characterize musculoskeletal injury risk in tactical populations. Although body composition has been linked to chronic disease in police officers, the link between body composition and functional movement quality has not been explored in this population. As such, the purposes of the study were to examine: (a) the effect of body mass index (BMI) on functional movement, and (b) determine the significance of fat mass (FM) and fat free mass (FFM) in predicting functional movement among …

Maximal Running Speed And Critical Speed Are Positively Related To Phase Angle In Healthy Young Adults, Trevor Short, Paulette Yamada

International Journal of Exercise Science

International Journal of Exercise Science 17(4): 405-417, 2024. Phase Angle (PhA), derived from bioelectrical impedance analysis, is a measurement of cellular resistance to electrical current and a non-invasive tool to monitor neuromuscular performance. The relationship between PhA and components of athletic performance is not fully understood. The purpose of this study was to determine if maximal running speed, critical speed (CS), and/or D prime (D’) derived from a 3-minute all-out-test (3MAOT) correlates to PhA, reactance (Xc), or resistance (R). Sixty-one (male n=35, female n=26) healthy young adults (23.4±3.9 years) completed bioelectrical impedance analysis (Inbody770) and a 3MAOT. The correlations between …

The Effect Of Stroboscopic Vision Training On Blind-Folded Straight-Line Walking, Saira Talwar, Johneric W. Smith, John Lamberth

International Journal of Exercise Science

International Journal of Exercise Science 17(1): 438-444, 2024. Stroboscopic vision training has shown to improve visual-motor controland dynamic visual acuity in sport performance;however, no studies have considered using this training to enhance kinesthetic awareness during walking, applicable to high fall-risk populations. Purpose: The purpose of this study was to assess the effect of stroboscopic vision training on blind-folded straight-line walking. Methods: Thirty-seven college-aged healthy participants (age: 20.14 ± 1.23 years; females: N = 32, males: N = 5) completed this study. In this pre-posttest quasi-experimental investigation, participants with no epileptic or balance disorder history completed a four-week progressive stroboscopic vision …

Species Delimitation, Discovery And Conservation In A Tiger Beetle Species Complex Despite Discordant Genetic Data., Daniel P. Duran, Robert A Laroche, Stephen J Roman, William Godwin, David P Herrmann, Ethan Bull, Scott P Egan

School of Earth & Environment Departmental Research

In an age of species declines, delineating and discovering biodiversity is critical for both taxonomic accuracy and conservation. In recent years, there has been a movement away from using exclusively morphological characters to delineate and describe taxa and an increase in the use of molecular markers to describe diversity or through integrative taxonomy, which employs traditional morphological characters, as well as genetic or other data. Tiger beetles are charismatic, of conservation concern, and much work has been done on the morphological delineation of species and subspecies, but few of these taxa have been tested with genetic analyses. In this study, …

A Fork In The Road: Uncovering The Impact Of Industrial Animal Agriculture On The Physical Health Of Communities Of Color, Mariana Zepeda

Population Health Research Brief Series

Nearly all (99%) farmed animals in the U.S. come from Concentrated Animal Feeding Operations (CAFOs). CAFOs are industrial agriculture facilities defined by the U.S. Environmental Protection Agency (EPA) as operations where animals are raised in confinement and meet animal size and waste material thresholds. Communities located near CAFOs, which tend to have high shares of low-income and racial/ethnic minority residents, are at risk of exposure to CAFO-related air and water pollutants. This brief summarizes the health risks for communities located near CAFOs. Additionally, it calls for government regulations that improve transparency, management, and consumer empowerment.

Identification Of Carrying Alien Dna Fragments In Solanum Melongena X Solanum Incanum Interspecific Progeny By Using Cosii Marker, Görkem Sülü, İlknur Polat, Hati̇ce Fi̇li̇z Boyaci, Ahmet Naci̇ Onus

Turkish Journal of Botany

Cultivated eggplant (Solanum melongena L.) is produced in many countries with temperate and tropical climates and has great economic importance. In recent years, resistance to biotic and abiotic stress conditions in addition to increasing yield and quality has gained importance in plant breeding including eggplant breeding. Therefore, the wild relative S. incanum is an important parent in breeding studies as it provides resistance to some important biotic and abiotic stresses for eggplant. It is possible to obtain a fully fertile hybrid between the two species, as well as to establish F2 lines. However, it is a mystery whether there is …

Isolation And Assessment Of Halophilic Rhizobacteria Plant Growth-Promoting Traits For Alleviating Salt Stress In Wheat, Alev Sezen, Ömer Faruk Algur, Ferruh Aşçi, Arzu Ünal

Turkish Journal of Botany

In this study, 22 halophilic bacteria were isolated from plants collected together with rhizosphere soil from habitats with high salt content in and around Erzurum. Various plant growth-promoting (PGP) properties of these isolates (nitrogen fixing, phosphate solubilizing, ACC deaminase, and IAA and siderephore production) were determined. Bacteria positive for PGP properties and various combinations with these bacteria were subjected to pot experiments in saline medium (greenhouse conditions) and their effects on growth parameters (root and stem length, fresh and dry weight, protein, and chlorophyll and carotenoid content) of wheat plants were determined. As a result of the research, the isolates …