Life Sciences Commons^™

Optogenetic Induction Of Mitochondrial Oxidative Stress As A Potential Model To Study Non-Hereditary Als, Samia Alam

Student Theses and Dissertations

Mitochondrial dysfunction is a common denominator of neurodegenerative diseases, including hereditary and non-hereditary Amyotrophic Lateral Sclerosis (ALS). Ten percent of ALS cases are hereditary while a majority are sporadic, with no known hereditary link. For effective therapeutic approaches to be developed, there is a need for development of a sporadic animal model to better understand disease mechanism. In previous work, our laboratory developed an animal model (known as mitokiller flies) to study sporadic cases of ALS. The work reported in this honors thesis focuses on the use of optogenetics and electrophysiology recording to study the formation of excessive hydrogen peroxide …

Factors Impacting Aggression In Reticulitermes, Abigail Blair

Undergraduate Theses and Capstone Projects

Termite aggression is a complex area of study with many factors of influence. We hypothesize that the environment, particularly levels, has an impact on termite aggression in Reticulitermes. Nest CO2

levels are higher for termites, which gives the basis for our experiments. We tested behavior in both ambient air and a higher CO2 environment. Soldier termites release alarm pheromones from frontal glands to trigger aggression responses in nestmates. We tested a combination of chemicals that should mimic alarm pheromones on a spinning nail to simulate a predator. Using EthoVision we calculated the speed, distance to the chemical, activity near the …

A Novel Positive-Contrast Magnetic Resonance Imaging Line Marker For High-Dose-Rate (Hdr) Mri-Assisted Radiosurgery (Mars), Li Wang, Yao Ding, Teresa L Bruno, R Jason Stafford, Eric Lin, Jeremiah W Sanders, Jingfei Ma, Ann H Klopp, Aradhana Venkatesan, Jihong Wang, Karen S Martirosyan, Steven J Frank

Faculty, Staff and Student Publications

Magnetic resonance imaging (MRI) can facilitate accurate organ delineation and optimal dose distributions in high-dose-rate (HDR) MRI-Assisted Radiosurgery (MARS). Its use for this purpose has been limited by the lack of positive-contrast MRI markers that can clearly delineate the lumen of the HDR applicator and precisely show the path of the HDR source on T1- and T2-weighted MRI sequences. We investigated a novel MRI positive-contrast HDR brachytherapy or interventional radiotherapy line marker, C4:S, consisting of C4 (visible on T1-weighted images) complexed with saline. Longitudinal relaxation time (T1) and transverse relaxation time (T2) for C4:S were measured on a 1.5 T …

Time Scale Separation In Life-Long Ovarian Follicles Population Dynamics Model, Romain Yvinec, Frédérique Clément, Guillaume Ballif

Biology and Medicine Through Mathematics Conference

No abstract provided.

A Mathematical Modeling Study On Hdv Rna, Alt, And Hbsag Dynamics Reveals Dual Mechanisms Of Peginterferon-Lambda., Adquate Mhlanga, Ohad Etzion, Harel Dahari

Biology and Medicine Through Mathematics Conference

No abstract provided.

Modeling Of Intracellular Compartmentalized Gpcr Signaling, Léo Darrigade

Biology and Medicine Through Mathematics Conference

No abstract provided.

Multi-Type Branching Processes In Time-Varying Environments, Arash Jamshidpey

Biology and Medicine Through Mathematics Conference

No abstract provided.

A Model Of Oocyte Population Dynamics For Fish Oogenesis, Louis Fostier, Frédérique Clément, Romain Yvinec, Violette Thermes

Biology and Medicine Through Mathematics Conference

No abstract provided.

A New Case Of Pedipalp Regeneration In Scorpio Kruglovi Birula, 1910 (Scorpiones: Scorpionidae), Ersen A. Yağmur, Mehmet S. Kılıç, Eyüp Güneş

Euscorpius

A new case of pedipalp regeneration is described and illustrated in a subadult female of Scorpio kruglovi Birula, 1910. A small, regenerated part of chela is observed on the anterior aspect of a normally developed right patella. This is the second published case of pedipalp regeneration.

A Histological Data-Driven Analysis Of The Hypoxic Microenvironment Of Preclinical Murine Bladder Tumors, Awino Maureiq E. Ojwang'

Biology and Medicine Through Mathematics Conference

No abstract provided.

Time-Dependent Antibody Kinetics For Infected And Vaccinated Individuals Via Graph-Theoretic Modeling, Rayanne Luke, Prajakta P. Bedekar, Anthony Kearsley

Biology and Medicine Through Mathematics Conference

No abstract provided.

Astrocyte Spatial Distribution Affects Growth Dynamics Of Breast Cancer Brain Metastases: An Agent-Based Modeling Study, Rupleen Kaur

Biology and Medicine Through Mathematics Conference

No abstract provided.

Modeling And Control Of Drug Resistance In Cancer Dynamics, James Greene

Biology and Medicine Through Mathematics Conference

No abstract provided.

Reaction-Diffusions System Simulated On Irregular Shapes And Surfaces Model Petal Spot Patterns In Monkeyflower Hybrids, Emily Simmons, Arielle M. Cooley, Joshua R. Puzey, Gregory D. Conradi Smith

Biology and Medicine Through Mathematics Conference

No abstract provided.

Fusing Classic Motion Energy Models And Deep Learning For Coarse-To-Fine Moving Object Segmentation, Matthias Tangemann, Matthias Kümmerer, Matthias Bethge

MODVIS Workshop

Classic motion energy models are able to predict a wide range of physiological and behavioral aspects of motion perception in humans. Whether these models can be used as a basis for higher-level tasks, such as moving object segmentation, has however hardly been explored yet. Here, we present a model that combines a motion energy representation with recent computer vision approaches for figure-ground segmentation of naturalistic stimuli. We find that unlike established motion segmentation models but similar to humans, our model generalizes to random-dot stimuli when only trained on RGB videos.

Biodiversity Loss & Urban Heat: A Nature- Based Wildlife Policy For The Las Vegas Metro, Zachary Billot

Student Research

As the population of the Las Vegas Metro continues to grow, new developments expand on the periphery. As Las Vegas continues to increase in size and develop further into wildlife habitat, not only are native animals and plants endangered, but residents are at risk of increasingly dangerous urban heat given the increase in impervious cover that makes Las Vegas the 2nd fastest warming metro in the U.S. This policy brief examines current policy and practice in place to highlight the need for positive human-wildlife interaction that will address the growing threat of biodiversity loss and heat vulnerability. This policy brief …

Comparing Long‑Term Patterns Of Spread Of Native And Invasive Plants In A Successional Forest, Matthew H. Yamamoto, Chad C. Jones

Botany Faculty Publications

A fundamental question in invasive plant ecology is whether invasive and native plants have different ecological roles. Differences in functional traits have been explored, but we lack a comparison of the factors affecting the spread of co-occurring natives and invasives. Some have proposed that to succeed, invasives would colonize a wider variety of sites, would disperse farther, or would be better at colonizing sites with more available light and soil nutrients than natives. We examined patterns of spread over 70 years in a regenerating forest in Connecticut, USA, where both native and invasive species acted as colonizers. We compared seven …

Multiple Myeloma Patients With A Long Remission After Autologous Hematopoietic Stem Cell Transplantation, Oren Pasvolsky, Zhongya Wang, Denái R Milton, Mark R Tanner, Qaiser Bashir, Neeraj Saini, Jeremy Ramdial, Yago Nieto, Guilin Tang, Partow Kebriaei, Yosra Aljawai, Hina N Khan, Hans C Lee, Christine Ye, Krina K Patel, Sheeba K Thomas, Robert Z Orlowski, Elizabeth J Shpall, Richard E Champlin, Muzaffar H Qazilbash

Faculty, Staff and Student Publications

Autologous stem cell transplantation (autoHCT) is considered standard of care for newly diagnosed multiple myeloma (MM). Although most patients eventually progress after autoHCT, a small proportion achieve a durable response. In this retrospective study we included 1576 patients, 244 (15%) of whom were long-term responders (LTR), defined as having a progression-free survival (PFS) of ≥8 years after transplant. Patients in the LTR group were younger than the non-LTR group (median age 58.4 vs. 59.5 years; p = 0.012), less likely to have high-risk cytogenetics (4% vs. 14%; p < 0.001), more often had

Phase 1b Study Of Batiraxcept In Combination With Durvalumab In Patients With Platinum-Resistant Ovarian Cancer, Anne Knisely, Emily M Hinchcliff, Elisabeth Gardiner, Reshma Rangwala, Kathryn Lito, Ying Yuan, Shannon N Westin, Karen H Lu, Amir A Jazaeri

Faculty, Staff and Student Publications

Combining an immune checkpoint inhibitor with batiraxcept (AVB-S6-500), an AXL inhibitor that acts via selective binding to growth arrest-specific protein 6 (GAS6), may improve anti-tumor immunity in platinum-resistant ovarian cancer (PROC). This phase 1b trial of durvalumab in combination with escalating doses of batiraxcept enrolled patients with recurrent PROC (NCT04019288). The primary objective was to determine the toxicity profile of the combination. Eleven patients were enrolled on the trial. No dose-limiting toxicities were observed, and no objective responses were noted. Median progression free survival (PFS) was 1.81 months (95% confidence interval (CI) 1.71–2.40), and median overall survival (OS) was 4.53 …

Dynamic Visual Acuity, Vestibulo-Ocular Reflex, And Visual Field In National Football League (Nfl) Officiating: Physiology And Visualization Engineering For 3d Virtual On-Field Training, Joshua Ong, Nicole V Carrabba, Ethan Waisberg, Nasif Zaman, Hamza Memon, Virginia A Lee, Ashtyn Z Vogt, Noor Laylani, Alireza Tavakkoli, Andrew G Lee

Faculty, Staff and Student Publications

The ability to make on-field, split-second decisions is critical for National Football League (NFL) game officials. Multiple principles in visual function are critical for accuracy and precision of these play calls, including foveation time and unobstructed line of sight, static visual acuity, dynamic visual acuity, vestibulo-ocular reflex, and sufficient visual field. Prior research has shown that a standardized curriculum in these neuro-ophthalmic principles have demonstrated validity and self-rated improvements in understanding, confidence, and likelihood of future utilization by NFL game officials to maximize visual performance during officiating. Virtual reality technology may also be able to help optimize understandings of specific …

Tumor Niche Network-Defined Subtypes Predict Immunotherapy Response Of Esophageal Squamous Cell Cancer, Kyung-Pil Ko, Shengzhe Zhang, Yuanjian Huang, Bongjun Kim, Gengyi Zou, Jie Zhang, Cecilia Martin, Karen J Dunbar, Gizem Efe, Anil K Rustgi, Hiroshi Nakagawa, Haiyang Zhang, Zhihua Liu, Jae-Il Park

Faculty, Staff and Student Publications

Despite the promising outcomes of immune checkpoint inhibitors (ICIs), resistance to ICI presents a new challenge. Therefore, selecting patients for specific ICI applications is crucial for maximizing therapeutic efficacy. Herein, we curated 69 human esophageal squamous cell cancer (ESCC) patients' tumor microenvironment (TME) single-cell transcriptomic datasets to subtype ESCC. Integrative analyses of the cellular network and transcriptional signatures of T cells and myeloid cells define distinct ESCC subtypes characterized by T cell exhaustion, and interleukin (IL) and interferon (IFN) signaling. Furthermore, this approach classifies ESCC patients into ICI responders and non-responders, as validated by whole tumor transcriptomes and liquid biopsy-based …

On The Effect Of Liquid Crystal Orientation In The Lipid Layer On Tear Film Thinning And Breakup, Mary Taranchuk

Biology and Medicine Through Mathematics Conference

No abstract provided.

A Model Of Shell Structure And Pattern In Mollusks, Rahnuma Islam, Bard Ermentrout, Sabrina Streipert

Biology and Medicine Through Mathematics Conference

No abstract provided.

Exploring The Evolution Of Altruistic Punishment Using A Pde Model For Multilevel Selection, Daniel Cooney

Biology and Medicine Through Mathematics Conference

No abstract provided.

Using Splines To Investigate The Effects Of Temperature On The Within-Mosquito Malaria Parasite Forms, Alexander J. Diefes, Miranda I. Teboh-Ewungkem

Biology and Medicine Through Mathematics Conference

No abstract provided.

Identifiability Analysis And Model Reduction For Soft Tissue Models, Mansoor A. Haider

Biology and Medicine Through Mathematics Conference

No abstract provided.

Perceptual Grouping With Latent Noise, Ben Lonnqvist, Zhengqing Wu, Michael H. Herzog

MODVIS Workshop

Humans effortlessly group elements into objects and segment them from the background and other objects without supervision. For example, the black and white stripes of a zebra are grouped together despite vastly different colors. A thorough theoretical and empirical account of perceptual grouping is still missing – Deep Neural Networks (DNNs), which are considered leading models of the visual system still regularly fail at simplistic perceptual grouping tasks. Here, we propose a counterintuitive unsupervised computational approach to perceptual grouping and segmentation: that they arise because of neural noise, rather than in spite of it. We show that adding noise in …

Tracking Food Quality In Algae-Daphnia Ecosystems Through Stage Structured Models And Colimitation, Tomas Ascoli

Biology and Medicine Through Mathematics Conference

No abstract provided.

Identifiability For Pde Models Of Fluorescence Microscopy Experiments, Veronica Ciocanel

Biology and Medicine Through Mathematics Conference

No abstract provided.

Land Use Intensification And Bio-Resource Utilisation In The South Pacific Islands, David Lopez Cornelio

International Journal of Islands Research

The long and gradual colonisation of the Pacific islands created settlements of cohesive social networks that fused or were displaced by western ways of life, trade and governance through the centuries. In this paper, a historical review of the processes of island discovery, plants domestication, and of land use practices are discussed alongside the main socioeconomic drivers of land cover change. The native trees of the South Pacific constitute an invaluable resource for sustainable development; they were used and domesticated for thousands of years but logging, commercial agriculture, mining, the introduction of exotic species and urban expansion are threatening them …