Life Sciences Commons^™

Evaluation Of Ten Alternative Treatments For The Management Of Harlequin Bug (Murgantia Histrionica) On Brassica Crops, Sarah Clark, Ricardo Bessin, David J. Gonthier, Jonathan L. Larson

Entomology Faculty Publications

Harlequin bug (Murgantia histrionica) poses a significant threat to cruciferous vegetable crops, leading to economic losses and challenges in sustainable agriculture. This 2-year field study evaluated the efficacy of exclusion netting and selected biopesticides in controlling harlequin bug populations in a field-grown broccoli crop. Treatments included an untreated control, industry standards Azera and Entrust, and ProtekNet mesh netting. Additionally, three commercial essential oil treatments including Essentria IC-3, Nature-Cide, and Zero Tolerance were tested along with two bokashi fermented composting products BrewKashi and Oriental Herbal Nutrient (OHN). During both the first and second year of the study, none of the commercially …

Row Covers Limit Pests And Disease And Increase Profit In Organic Acorn Squash, Kathleen Fiske, Nieyan Cheng, Ryan Kuesel, Wendong Zhang, Ricardo Bessin, Mark A. Williams, David J. Gonthier

Entomology Faculty Publications

Organic cucurbit growers face many challenges to production including insect pests, insect-vectored diseases, and non-vectored diseases. While Organic Material Review Institute (OMRI) -listed pesticides underperform at suppressing pests and diseases, some alternative pest management strategies hold promise, but little research exists on their cost-effectiveness. We compared the efficacy of mesotunnel systems (nylon-mesh netting row covers deployed over bent metal hoops) and OMRI-listed pesticides (fungicides and insecticides) on acorn squash across 2 years. During the early part of the season, before row covers were removed for pollination, we found 1.7 (2020) and 0.3 (2021) times more cucumber beetles in the uncovered …

Snpaimer: R Package For Evaluating Ancestry Informative Marker Contributions In Non-Model Population Diagnostics, Kim L. Vertacnik, Oksana V. Vernygora, Julian R. Dupuis

Entomology Faculty Publications

Motivation: Single nucleotide polymorphism (SNP) markers are increasingly popular for population genomics and inferring ancestry for individuals of unknown origin. Because large SNP datasets are impractical for rapid and routine analysis, diagnostics rely on panels of highly informative markers. Strategies exist for selecting these markers, however, resources for efficiently evaluating their performance are limited for non-model systems.

Results: snpAIMeR is a user-friendly R package that evaluates the efficacy of genomic markers for the cluster assignment of unknown individuals. It is intended to help minimize panel size and genotyping effort by determining the informativeness of candidate diagnostic markers. Provided genotype data …

Shared Patterns Of Population Genomic Variation And Phenotypic Response Across Rapid Range Expansions In Two Invasive Lady Beetle Species, Angela G. Jones, John J. Obrycki, Arun Sethuraman, David W. Weisrock

Entomology Faculty Publications

Non-native lady beetle species have often been introduced, with variable success, into North America for bio- logical control of aphids, scales, whiteflies, and other agricultural pests. Two predatory lady beetle species, Propylea quatuordecimpunctata and Hippodamia variegata, both originating from Eurasia, were first discovered near Montreal, Quebec, in North America in 1968 and 1984, respectively, and have since expanded into northeastern North America and the midwestern United States. In this study, we estimate the range-wide pop- ulation structure, establishment and range-expansion, and recent evolutionary history of these lady beetle species using reduced-representation genotyping-by-sequencing via ddRADseq. In addition, we quantified the responses …

Staufenc Facilitates Utilization Of The Erad Pathway To Transport Dsrna Through The Endoplasmic Reticulum To The Cytosol, Jinmo Koo, Subba R. Palli

Entomology Faculty Publications

RNA interference (RNAi) is more efficient in coleopteran insects than other insects. StaufenC (StauC), a coleopteran-specific double-stranded RNA (dsRNA)-binding protein, is required for efficient RNAi in coleopterans. We investigated the function of StauC in the intracellular transport of dsRNA into the cytosol, where dsRNA is digested by Dicer enzymes and recruited by Argonauts to RNA-induced silencing complexes. Confocal microscopy and cellular organelle fractionation studies have shown that dsRNA is trafficked through the endoplasmic reticulum (ER) in coleopteran Colorado potato beetle (CPB) cells. StauC is localized to the ER in CPB cells, and StauC-knockdown caused the accumulation of dsRNA in the …

A Drug's Life: The Untapped Potential Of Secondary Pharmacology Studies In Drug Development, Christina Scott

The University of New Hampshire Law Review

The United States Food and Drug Administration has evolved over the past century to regulate new medicine and protect the public from harmful or ineffective drugs. Drug development and testing science have advanced rapidly alongside the FDA’s increased regulation, enabling pharmaceutical companies to assess a drug's potential adverse reactions by studying its reactivity with various proteins called "off-target receptors." Off-target proteins are often screened and reported in the Investigational New Drug Application as a percentage indicating the drug's binding strength to each protein, which suggests the strength of a particular adverse drug effect. Adverse drug effects often lead to unfavorable …

Aged 539 - Graduate Internship, Braidyn R. Cossa

Agricultural Education: Graduate Internship Reports

This report reflects on the Cal Poly Rodeo Program's alignment with the National Standards for Sport Coaches, showcasing a comprehensive approach to athlete development across multiple critical domains. Emphasizing a well-defined coaching philosophy, the program promotes sportsmanship, ethical behavior, and academic success. Personalized coaching addresses the developmental stages of athletes, ensuring a balance between their academic and athletic roles. The program employs effective teaching methods, clear communication, and constructive feedback to foster a positive environment and build strong coach-athlete relationships based on mutual respect and trust.

The coaches possess deep knowledge of rodeo skills and strategies, utilizing psychological techniques to …

Assessing Nicotine Intake And Cotinine Levels In Inbred High Drinking In The Dark (Ihdid) Mice: A Potential Model For Nicotine Use Disorders (Nuds), Jonathan Palacios

University Honors Theses

Nicotine use disorders (NUDs) pose a persistent global health threat, contributing to significant morbidity and mortality. It is a complex issue arising from a combination of different factors; thus, it is crucial to approach it from different perspectives. In this study, we aimed to determine whether the inbred High Drinking in the Dark (iHDID) mice replicate lines (iHDID-1 and iHDID-2) represent a good model for nicotine use disorders (NUDs). We measured nicotine (50µg/mL) intake in a Drinking in the Dark (DID) assay (n=12/sex/line). At the end of the DID assay, we measured serum cotinine levels using a cotinine ELISA kit. …

Microbiological And Physicochemical Changes In Rabbit Meat During Ambient Storage, Marielle Gamboa, Dennis Marvin Santiago, April Shayne Sulabo, Mary Ann Torio

The Philippine Agricultural Scientist

This study aimed to evaluate the changes in rabbit meat during storage at ambient temperature (30 ± 1ºC) for nine hours. The study focused on two rabbit muscle parts: the hind leg and the saddle, investigated in terms of microbiological parameters such as aerobic plate count (APC) and total coliform count (TCC); and physicochemical parameters such as pH, color, total myoglobin concentration, and lipid oxidation. Data obtained were subjected to statistical analysis at a 5% significance level (p < 0.05). Results revealed that the pH of both portions of rabbit muscle decreases over time during storage. This decrease is attributed to the growth of acid-producing microorganisms, which ultimately leads to spoilage in rabbit meat. On the contrary, color values (L*, a*, and b*) showed an increasing trend in both muscle portions, indicating a discoloration of rabbit meat during storage. Both lipid oxidation and total myoglobin content of rabbit meat did not change significantly during storage, but lipid oxidation varied between muscle parts. Based on the microbiological analysis of rabbit meat, both aerobic plate count (APC) and total coliform count (TCC) increased significantly during storage in both muscle portions. Results of the study suggest that freshly slaughtered rabbit meat must remain at ambient storage for the shortest time, as this storage condition will cause spoilage of meat, making it unfit for human consumption.

Baseline Characterization Of Semen From Philippine Native Chickens: Banaba, Joloano And Paraoakan, Darcy Pamulaklakin, Carla Alilie Junsay, Consuelo Amor Estrella, Percival Sangel

The Philippine Agricultural Scientist

The study aimed to characterize and establish baseline data on the quantity and quality of fresh avian semen utilizing a sample of Philippine native roosters. Twenty-two heads each were acquired from breeds Banaba, Joloano, and Paraoakan. The baseline data analysis revealed significant variations in semen volume among different genetic groups, with Banaba displaying the highest volume, followed by Joloano and Paraoakan. Banaba also exhibited the highest semen pH value of 7.27 when compared to the other two genetic groups (P < 0.05). Across various genetic groups of native chickens, the majority of semen samples demonstrated a thick and creamy consistency and color (42.6%), followed by thin and creamy (32.9%), with a statistical significance of P < 0.05. Furthermore, variations in sperm concentration were observed among genetic groups, with Paraoakan having the highest sperm concentration, followed by Banaba and Joloano (P < 0.05). When the semen from Banaba and Joloano native roosters were extended in Ringer’s solution, it exhibited good motility, with more than 50% of spermatozoa in motion, even after six hours of extension. In contrast, the pooled extended semen from Paraoakan native roosters displayed poor motility, particularly after eight hours of extension (P < 0.05). The study also showed that storage temperatures did not significantly affect all the sperm quality parameters of Banaba and Joloano. However, for Paraoakan, samples stored at low temperatures of 5 – 10ºC had significantly higher percent motile and progressive sperm, and lower percent static sperm than those stored at room temperature (22 – 25ºC) (P < 0.05).

Isolation And Identification Of Entomopathogenic Fungi From The Soils Of Northwest Iran And Their Biological Control Efficacy On The Flour Moth (Ephestia Kuehniella) [Research Note], Mohadeseh Moghasem, Manizheh Jamshidi, Reza Khakvar, Sevil Nematollahi

The Philippine Agricultural Scientist

Entomopathogenic fungi have the potential to serve as alternatives to or supplements for chemical pesticides in insect biocontrol, with many of these fungi being utilized in commercial and integrated pest control practices globally. This study aimed to isolate and evaluate the efficacy of various entomopathogenic fungi for the biocontrol of the flour moth, Ephestia kuehniella (Lep: Pyralidae). Multiple isolates of entomopathogenic fungi were acquired from soils across different districts of Azerbaijan province in northwest Iran, and their virulence against E. kuehniella larvae was assessed. Seventeen isolates representing diverse entomopathogenic fungi were isolated and purified using the soil trap method from …

Short-Term Response Of Soil Microbial Community And Soil Bio-Chemical Properties To Soybean Intercropping In A Cassava-Based Cropping System, Nolissa Organo, John Lester Pide, Michelle Anne Calubaquib, Elmer Enicola, Evelyn Delfin, Vanessa Calderon, Raymund Antiola, Hosne Dilzahan, Andre Cruz

The Philippine Agricultural Scientist

A cassava-based cropping system study assessed the short-term response of soil chemical and biochemical properties and soil microbial communities to soybean intercropping. Two soybean varieties (‘Select Manchuria’ and ‘Tiwala 12’) were tested as intercrops. The treatments did not affect the soil’s chemical (pH, OM, N, P, K) and biochemical (basal respiration and dehydrogenase and urease enzyme activities) properties after one cropping period. Amplicon sequencing analysis found that intercropping promoted the abundance of bacterial orders Actinomycetales, Solibacterales, Sphingomonadales, and Rhodospirillales. These groups play active roles in organic matter decomposition and can potentially improve the soil quality in an area by enhancing …

Growth And Yield Of Lettuce (Lactuca Sativa Var. Crispa) In Varying Irrigation Water Salinity And Leaching Fractions, Berkant Odemis, Derya Kazgöz Candemi̇r, Koray Çapar

The Philippine Agricultural Scientist

This study aimed to determine the response of yield and yield parameters of the ‘Cospirina’ lettuce plant, known to be moderate salinity tolerant, to different levels of salt water applications and different leaching rates in the Eastern Mediterranean Region of Hatay Province, Türkiye. Lettuce was irrigated at three different irrigation water salinity levels (EC0 = 0.5 dS m^-1-control, EC2 = 2 dS m^-1, EC4 = 4 dS m^-1) and four different leaching fractions (LF0 = 0%, LF1 = 10%, LF2 = 20%, LF3 = 30%). Irrigation water salinity was adjusted by adding different amounts …

A Pilot Study On Particulate Matter Concentrations From Cooking And Its Effects On Indoor Air Pollution In A Mexican American Household In Mission, South Texas, Usa, Sai Deepak Pinakana, Carlos Garcia Patlan, Esmeralda Mendez, Amit U. Raysoni

School of Earth, Environmental, & Marine Sciences Faculty Publications

This pilot study focuses on particulate matter (PM) while cooking in a South Texan household. Dishes such as Beef, Burger, Fish, Chicken, Egg Sandwich, and Hotdog were prepared. Indoor PM levels were compared with outdoor PM levels. A DustTrak DRX was used to monitor the PM released during the cooking process. PM2.5 levels were highest while cooking beef, 162.79 + 209.62 μg m−3. Hot Dog preparation resulted in the lowest PM2.5 concentration of 27.72 + 5.58 μg m−3. Indoor PM2.5 levels were observed to be greater in contrast to outdoor levels when compared to the outdoor levels (96 words).

Species Diversity And Extinction Risk Of Vertebrate Pollinators In India, Ratheesh Kallivalappil, Florencia Grattarola, Dilkushi De Alwis Pitts, Sheena C. Cotter, Daniel Pincheira-Donoso

All Works

Animal pollinators underpin the functioning and persistence of ecosystems globally. However, the vital role of pollination is being progressively eroded by the worldwide decline of pollinator species caused by human-induced environmental degradation, resulting in rising costs to biodiversity, agriculture, and economy. Most studies quantifying pollinator diversity and declines have focused on insects, whereas vertebrate pollinators remain comparatively neglected. Here, we present the first comprehensive study quantifying the macroecological patterns of species richness and extinction risk of bird and mammal pollinators in India, a region of extremely high biodiversity and increasing anthropogenic pressure. Our results reveal that hotspots of mammal pollinator …

Microbial Symbiont-Based Detoxification Of Different Phytotoxins And Synthetic Toxic Chemicals In Insect Pests And Pollinators, Olivia Kline, Neelendra K. Joshi

Entomology and Plant Pathology Faculty Publications and Presentations

Insects are the most diverse form of life, and as such, they interact closely with humans, impacting our health, economy, and agriculture. Beneficial insect species contribute to pollination, biological control of pests, decomposition, and nutrient cycling. Pest species can cause damage to agricultural crops and vector diseases to humans and livestock. Insects are often exposed to toxic xenobiotics in the environment, both naturally occurring toxins like plant secondary metabolites and synthetic chemicals like herbicides, fungicides, and insecticides. Because of this, insects have evolved several mechanisms of resistance to toxic xenobiotics, including sequestration, behavioral avoidance, and enzymatic degradation, and in many …

Grazing Annual Pastures – Using Feed On Offer (Foo) As A Guide, Department Of Primary Industries And Regional Development, Western Australia

Animal production and livestock factsheets

Grazing management in winter and spring in South West Western Australia (SW WA) can manipulate the quality, quantity and composition of pasture. These pasture changes can increase livestock feed efficiency and productivity, reduce insect populations and improve pasture persistence. Seasonal grazing based on feed on offer (FOO) is described here to maximise stocking rate and pasture production.

The Department of Primary Industries and Regional Development recommends using feed measurements and feed budgeting to increase productivity and reduce livestock health risks.

Boosting Winter Pasture Growth, Department Of Primary Industries And Regional Development, Western Australia

Grains and other field crops factsheets

Applying gibberellic acid or nitrogen fertiliser to pasture in winter can increase dry matter production of grasses and broadleaf weeds and help reduce feed shortages in winter.

Reduce Crop Weed Seed Numbers In The Soil, Department Of Primary Industries And Regional Development, Western Australia

Grains and other field crops factsheets

There are various methods of weed control in the pre-sowing phase, including removing weed seed numbers in the soil, fallow, stubble, and by various methods. This factsheet covers some of the methods, including:

• Burning crop residues to reduce the surface seed bank of many weeds

• Encouraging insect predation of seed

• Inversion ploughing to bury weed seeds at a depth they can’t germinate

• Autumn tickle to encourage earlier germination of weed seeds for destruction using a knockdown herbicide

• Delaying sowing to allow greater germination of weed seeds for destruction using a knockdown herbicide or cultivation, prior …

Single-Cell Analysis Identifies Plk1 As A Driver Of Immunosuppressive Tumor Microenvironment In Luad, Yifan Kong, Chaohao Li, Jinpeng Liu, Sai Wu

Markey Cancer Center Faculty Publications

PLK1 (Polo-like kinase 1) plays a critical role in the progression of lung adenocarcinoma (LUAD). Recent studies have unveiled that targeting PLK1 improves the efficacy of immuno- therapy, highlighting its important role in the regulation of tumor immunity. Nevertheless, our understanding of the intricate interplay between PLK1 and the tumor microenvironment (TME) remains incomplete. Here, using genetically engineered mouse model and single- cell RNA-seq analysis, we report that PLK1 promotes an immunosuppressive TME in LUAD, characterized with enhanced M2 polarization of tumor associated macrophages (TAM) and dampened antigen presentation process. Mechanistically, elevated PLK1 coin- cides with increased secretion of CXCL2 …

E6 Inhibtion-Mediated Combinatorial Therapy For Hpv+ Hnscc, Sonia Whang

Loma Linda University Electronic Theses, Dissertations & Projects

High-risk human papillomaviruses (HPV) are the causative agents of virtually all cases of cervical cancer and up to 80% of head and neck squamous cell carcinoma (HNSCC). Current treatment options include chemo- and radiotherapy, though the effectiveness of these therapies is limited by the viral oncoprotein E6, which disrupts apoptotic pathways by binding to and accelerating the degradation of molecules such as p53 and caspase- 8. Our hypothesis was that inhibiting E6 and rescuing the apoptotic mediators would increase the effectiveness of apoptotic agents. The aims of this study were to first, develop an HPV+ HNSCC xenograft model to test …

Implementation And Efficiency Of Electric Motors In Lygus Bug Vacuums For Strawberries, Adam J. Rantz

Master's Theses

Further automation of the agricultural industry and an increase in organic fruit production are needed to address labor shortage and increased demand. The move to an autonomous bug vacuum is easier if the equipment is electric, and not powered by a tractor’s PTO (power take-off) shaft. The main objective of this project was to design a set of lygus bug vacuums to go on a robot that meets industry standards while using electric power instead of hydraulic. The frame of the vacuum was designed using the industry standard. While hydraulic systems have been a very effective power source for vacuums …

Deciphering The Contribution Of Microglia To Neurodegeneration In Friedreich's Ataxia, Sydney N. Gillette

Master's Theses

Friedreich's ataxia (FRDA) is the most prevalent inherited ataxia, affecting one in every 50,000 individuals in the United States. This hereditary condition is caused by an abnormal GAA trinucleotide repeat expansion within the first intron of the frataxin gene resulting in decreased levels of the frataxin protein (FXN). Insufficient cellular frataxin levels results in iron accumulation, increased reactive oxygen species production and mitochondrial dysfunction. Tissues most heavily impacted are those most dependent on oxidative phosphorylation as an energy source and include the nervous system and muscle tissue. This is evident in the clinical phenotype which includes muscle weakness, ataxia, neurodegeneration …

Identification Of Downy Mildew Resistance In Wild Arugula And Evaluation Of Downy Mildew Causing Pathogens And Management Practices, Reilly B. Blair

Master's Theses

Downy mildew has been a potentially devastating constraint to crop production within the Brassicaceae family worldwide (CABI, 2022) and on the Central Coast of California (Smukler, et al, 2008; Koike, et al. 2007). Downy mildew is a foliar disease, caused by the pathogens in the Hyaloperonospora genus on plants within the Brassicaceae family (Goker, et al, 2009). Downy mildew is a disease that is common in region of the world with Coastal climates that provide humidity and moderate temperatures (Sarahan, et al, 2017). Crops within the Brassicaceae family maintain a predominant role in agricultural systems worldwide (Cartea, et al, 2011) …

Red Raspberries Attenuate Blood Glucose Spike Of A High Glycemic Load Breakfast Cereal, Dante J. Martin

Master's Theses

Blood glucose (BG) spikes increase chronic disease risk in those with and without diabetes. The fiber and phytonutrient content of fruit, such as raspberries has the potential to attenuate the BG spike of a high glycemic load (HGL) meal. We examined the effect of red raspberries (RRs) on the BG spike when added to a HGL meal. In this randomized cross-over trial, 16 university students were given breakfast cereal and almond milk (control), the control breakfast with 140g added RRs, and the control breakfast with sugar equivalent to the sugar content of the RRs (50% sugar increase from control). Meals …

Emerging Diseases, Abiotic Disorders, And Macrophomina Root Rot Management Of California Strawberry, Cooper Calvin

Master's Theses

Strawberry is an economically important crop in California, with an estimated value of $2.68 billion in 2023. In California strawberry production, mitigation of low plant health and yield often focuses on major soilborne pathogens, while the contribution of minor pathogens and abiotic disorders to production shortcomings are often overlooked. The objectives of the first project in this thesis are to determine the pathogenicity of multiple minor pathogens and quantify other biotic and abiotic factors that can reduce plant health such as viruses and soil salinity. Two pathogens of the black root rot complex, Pythium spp. and Rhizoctonia spp. as well …

Effects Of A Cb1 Receptor Antagonist On Anxiety In Adult Rats Exposed To Thc During Development, Jennifer Aguilera-Fonseca, Karla Colley, Atoria Hamm, Eddie Galarza, Joe Morse, Rachel Ntor, Destiny Pichardo, Vincent P. Markowski

McNair Scholars Program

No abstract provided.

Neutrophil To Lymphocyte Ratio (Nlr) In Captive Olive Baboons (Papio Anubis): The Effects Of Age, Sex, Rearing, Stress, And Pregnancy, Sarah J. Neal, Angela M. Achorn, Steven J. Schapiro, William D. Hopkins, Joe H. Simmons

Anthropology Faculty Publications

In apes and humans, neutrophil to lymphocyte ratio (NLR) can be used as a predictive indicator of a variety of clinical conditions, longevity, and physiological stress. In chimpanzees specifically, NLR systematically varies with age, rearing, sex, and premature death, indicating that NLR may be a useful diagnostic tool in assessing primate health. To date, just one very recent study has investigated NLR in old world monkeys and found lower NLR in males and nursery-reared individuals, as well as a negative relationship between NLR and disease outcomes. Given that baboons are increasingly used as research models, we aimed to characterize NLR …

Using Bayesian Multispecies Models To Evaluate Fish And Invertebrate Detection Probability And Distribution In The Hypersaline Bahia Grande Tidal Basin, Roy M. Ulibarri, Catherine M. Eckert, David Hicks, David Montagne, Brandon Jones, David R. Stewart

School of Earth, Environmental, & Marine Sciences Faculty Publications

Objective

In 2000, the Laguna Atascosa National Wildlife Refuge acquired the Bahia Grande (Texas) management unit, a space that had lain barren and arid for 70 years. A large cooperative partnership launched a restoration project to replenish the basin and recover its original tidal hydrology. In 2005, the construction of a pilot channel successfully restored water throughout the basin, and plans to eventually widen the channel were developed. Our study aims to evaluate an estuarine habitat restoration by assessing ecological drivers and the impacts on species diversity.

Methods

We evaluated species richness, detection/occupancy rates, and species–habitat relationships, and we estimated …

The Role Of Micrornas On Systemic And Central Nervous System- Inflammation In Aged Mice, Anik Banerjee

Dissertations and Theses (Open Access)

MicroRNAs play a crucial role in multiple biological processes, including development, cell differentiation, proliferation, metabolism, and cell death. Aberrant regulation of microRNAs is seen in many diseases, such as sepsis, cardiovascular disease, neurological diseases such as stroke, and metabolic disorders. Because of their involvement in disease processes, microRNAs have been investigated as both potential biomarkers, and as therapeutic targets. Age-related inflammatory diseases including diabetes, obesity, and atherosclerosis are important risk factors for infection and sepsis. Intestinal barrier impairment occurs with aging and after brain injuries, including stroke. Both aging and stroke increase the risk of infection and sepsis and are …