Life Sciences Commons^™

Largemouth Bass Neurocranium, Owen Duerbeck, Ian Thelwell, Oliva Weeks

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

No abstract provided.

Investigating The Role Of Tetherin Protein In Multivesicular Bodies Fusions In Lung Cancer Cells, Md. Rakib Miah

Electronic Theses and Dissertations

Cells rely on the secretion of exosomes to communicate with one another and this process is potentially mediated by a protein called tetherin, which anchors exosomes to the cell surface to limit their spread. Tetherin protein has attracted a lot of attention because of its capacity to hinder the propagation of viruses by attaching virions to the surface of host cells. Treatment with interferon-alpha (IFNα) increases the production of tetherin, although it is not known how this affects tetherin localization and exosome-mediated communication. This thesis looks at how the expression of tetherin, which IFNα boosts, affects the dynamics of intercellular …

The Utilization Of String Pulling To Determine Female Rats' Dual Cognitive Motor Task Performance Following Space Flight Stressor Exposure, Doc-Haden Rodgers, Nicole M. Atttallah, Teresa L. Garcia, Nuhamine A. Moges, N. A. Moges, K. D. Omengan, J. F. Cortez, K. S. Dhede, A. A. Blackwell

Undergraduate Research Symposium Posters

During deep space exploration, astronauts depend on mission-essential performance in Dual Cognitive Motor Tasks (DCMT), such as receiving information from ground control to assemble and configure wires during a spacewalk. DCMT relies upon processing cognitive and motor information simultaneously. Previous research on rodent models has shown various impairments in cognition and motor function in separate tasks after exposure to deep space radiation and sleep fragmentation (SF). However, an assessment of DCMT performance in rodents has not been established. Rats and humans use similar hand-over-hand movements to pull a string, and task demands may be varied to assess cognition and motor …

Examining Emotion And Ease Of Recall For Life Story Memories In Young Adults, Roxanna E. Chavez, Erin L. Murphy, David E. Copeland

Undergraduate Research Symposium Posters

Life stories are narratives that use autobiographical memories to shape personal identity. This study investigated how emotional valence and ease of recall may change over time. Participants were asked to recall ten life story memories in two interviews held three weeks apart. Participants provided ratings of emotional valence and ease of recall for each memory. A significant difference was found in emotional valence between Session 1 (M = 3.159, SD = .772) and Session 2 (M = 2.905, SD = .788), t(68) = 2.734, p < .01, with Session 1 memories rated as significantly more negative (M = 1.812, SD = 1.427) than those in Session 2 (M = 1.275, SD = 1.316), t(68) = 3.232, p < .01. Furthermore, negative memories were more frequent in the last five Session 1 memories (M = 0.986, SD = 0.866) than in all of Session 2 memories (First Five: M = 0.652, SD = .783; Last Five: M = 0.623, SD = .892), F(3, 204) = 3.663, p < .05. For ease of recall, the first five memories in both sessions (Session 1: M = 5.684, SD = 0.806; Session 2: M = 5.612, SD = 0.963) were significantly easier to recall than the last five in both sessions (Session 1: M = .214, SD = 1.128; Session 2: M = 5.136, SD = 1.080), F(2.498, 169.864) = 7.369, p < .001. Overall, these findings suggest participants recalled more accessible memories first, with negative memories being harder to retrieve as sessions progressed.

Investigating The Impact Of Psychological Interventions On Autoimmune Disease Progression In Women, Nicole Datastanyan

Undergraduate Research Symposium Posters

Autoimmune disease arises when an individual's immune system mistakenly attacks and damages the body’s tissues. Autoimmune disease disproportionately affects women, with eighty percent of diagnosed patients being female. This research proposal aims to explore the relationship between psychological factors (e.g., stress, anxiety, depression) and the progression of autoimmune diseases. This poster will propose a detailed study to assess whether reducing psychological distress through cognitive behavioral therapy (CBT) can slow disease progression. Cognitive behavioral therapy is a form of talk therapy to relieve symptoms of mental health conditions such as depression, anxiety, stress, or grief. Two hundred female patients diagnosed with …

Pathway-Based Polygenic Risk Score Analysis Of Brain Glial Indicates Cell-Type-Specific Roles In Alzheimer's Disease, Tyrell Pratt, Alice Lee, Jennifer Zheng, Faria Tavacoli, Hayley Ho, Tingwei Liu, Jingchun Chen

Undergraduate Research Symposium Posters

Background: Alzheimer's disease (AD) is a complex neurodegenerative disorder characterized by progressive cognitive decline and extensive brain pathology, including amyloid plaques, neurofibrillary tangles, and neuroinflammation. This study aims to identify any glial cell type-specific pathways associated with AD.

Methods: We first investigated the correlation between AD and the genetic risk of glia-specific pathways using pathway-based polygenic risk score (PRS) with PRSet software in the discovery data (ADc1234ADA) adjusted by the top two principal components (PC1, PC2) (Model 1), followed by additional adjustment with sex, age, and APOE ε4 count in Model 2. Further PRSet analyses were replicated in independent data …

Inter-Rater Reliablility Of Sharp Wave Ripple Detection In Recently Trained Experts, Orlando Montiel, Gage Pompa, Yader Gomez, Talha Soluoko

Undergraduate Research Symposium Posters

Sharp wave ripples (SWR) are a brain phenomenon that originate in the hippocampus, a region crucial for memory and learning. These events occur during periods of rest or slow-wave sleep and are characterized by fast oscillatory bursts (150-250Hz) and are thought to be important for the brain to consolidate memory. SWR are believed to facilitate the transfer of information from the hippocampus to the cortex, strengthening synaptic connections & enabling long-term memory storage. Accurate detection & assessment of SWRs is essential for advancing how the brain processes and stores information.

This study examines the accuracy/consistency of SWR image selection and …

Analysis Of Adverse Events Associated With Sglt2 Inhibitors And Molecular Mechanisms Using Faers Database And Transcriptome Data, Rahinatu Bawah Ali

USF Tampa Graduate Theses and Dissertations

In this thesis, we explored the differential effects of sodium-glucose cotransporter-2 (SGLT2) inhibitors on cardiovascular and renal health, utilizing both clinical data and molecular insights. Focusing on three commonly prescribed SGLT2 inhibitors—Dapagliflozin, Canagliflozin, and Empagliflozin—we employed the Food and Drug Administration Adverse Event Reporting System (FAERS) database to assess adverse events, including myocardial infarction, cardiac failure, tachycardia, acute kidney injury (AKI), renal failure, urinary tract infections, and fungal infections. This analysis was complemented by transcriptomic data from kidney cell lines treated with these drugs, processed through NCBI’s GEO2R and Limma programs, to reveal the gene expression profiles linked to these …

The Effects Of Divides Attention On Long-Term Memory For Natualistic Stimuli, Gaia Steinberg, Jackson S. Pelzner, Rhiannon N. Soriano Smith, Colleen M. Parks

Undergraduate Research Symposium Posters

The ability to identify previously experienced events is a fundamental aspect of memory. This study investigates recognition memory using naturalistic stimuli, specifically news headlines, to explore both controlled (recollection) and automatic (familiarity) memory processes. Most recognition memory experiments rely on simplistic stimuli like words or pictures, but we aim to extend these theories by using more complex, naturalistic materials (news headlines). Participants completed recognition tasks with both headlines and pictures to establish baseline differences between these stimuli types. The order of presentation between stimulus types was randomized between pictures or headlines first. They were assigned to either full or divided …

Glial-Specific Genes Are Strongly Associated With Alzheimer's Disease By Gene-Based Polygenic Risk Score Analysis, Jennifer Zheng, Faria Tavacoli, Tyrell Pratt, Alice Lee, Tingwei Liu, Jingchun Chen

Undergraduate Research Symposium Posters

Methods: Gene-based PRSs were constructed in AD cases and controls within each gene of the glial cells, according to the GWAS summary statistics of European ancestry. In detail, gene-based PRSs were first calculated for each glial cell type-specific gene for AD cases and controls in the discovery dataset (ADc1234ADA) using PRSet software. A meta-analysis with a fixed model was performed when the signal in both datasets was in the same direction. Bonferroni corrections for multiple testing (at α = .05) were used to determine significance within each of the three glial groups. Forest plots were used to visualize the results …

Black Grouper Neurocranium, Angelina Trapani-Banyra, Victoria Bruno, Mason Schleicher

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

No abstract provided.

Exploring Modality Differences In Recognition Memory: Repetition Effects On Recollection And Familiarity, Ivanesa Velikova, Kevin Mohawk, Colleen Parks

Undergraduate Research Symposium Posters

Research has shown that memory for visual objects tends to be superior compared to memory for auditory objects. The present study aimed to investigate the underlying mechanisms of why recognition memory tends to be better for visual information. Recognition memory relies on two processes, recollection and familiarity. Recollection involves retrieving contextual details of a memory while familiarity is simply a feeling that something has been encountered before. We investigated recollection and familiarity in the two modalities by having participants lean a list of auditory objects (e.g., dog barking) and visual objects (e.g., picture of a lion) under full attention (FA) …

The Effect Of Encoding Strategies On Recognition Memory, Camila Schettini, Cole Kaneshiro, Kevin Mohawk, Colleen Parks

Undergraduate Research Symposium Posters

Successful memory decisions require distinguishing between true and false memories. VariouS strategies can be used to avoid false memories such as the Recall-To-Reject (R-R) strategy and the Distinctiveness Heuristic (DH). R-R involves rejecting false information by recalling correct information (I know this person is not Bob, because Bob has brown hair); while DH involves the rejection of false information due to failure to recollect expected information (I know I never met this person because I would remember if I had). The purpose of this study is to examine how these strategies affect recognition memory. In the present study participants were …

Comparing Forgetting Rates Between Item And Relational Memories, Lex De Asis, Rhiannon N. Soriano Smith, Colleen M. Parks

Undergraduate Research Symposium Posters

Forgetting is an everyday occurrence where an idea that could be recalled successfully is no longer able to be retrieved (Tulving, 1974). Multiple theories suggest how forgetting occurs, such as the decay theory, which suggests that memories are gradually forgotten over time, and the interference theory, in which forgetting occurs because of competing information. Additionally, there are two newer theories which both predict that item representations should be forgotten because of interference and mnemonic discrimination should be forgotten due to decay: the memory system-dependent forgetting hypothesis (Hardt, Nader, & Nadel, 2013), and the representation theory of forgetting (Sadeh et al., …

The Characterization Of Cooperative String-Pullung Behavior In Rats After Exposure To Space Flight Stressors, Teresa L. Garcia, Nuhamine A. Moges, Sierra Ordonez, Nicole M. Attallah, D. H. Rodgers, A. Adhikari, K. D. Omengan, D. Lloyd, S. L. Gleed, A. A. Blackwell

Undergraduate Research Symposium Posters

Astronauts work cooperatively to complete tasks on missions through deep space where they will experience stressors, including radiation and sleep fragmentation, that may impair performance. Animals work together to achieve a common goal during cooperative tasks using string-pulling behaviors. While string-pulling behavior has revealed deficits in rat sensorimotor function after exposure to space flight stressors, it has yet to be determined if rats will engage in cooperative string-pulling or if these stressors will influence cooperation. Thus, to explore how space flight stressors impact cooperative behavior, female Wistar rats were exposed to either sham (n = 8) or 10 centi-grays of …

Assessing Ectomycorrhizal Advantage On Tree Species Within Differing Soil Materials In Spring Mountains, Nevada, Kirsten Soriano, Riley Jones, Daniel Thompson

Undergraduate Research Symposium Posters

Ectomycorrhizal fungi (ECM) form symbiotic relationships with their partner plant, creating root systems which allow for the exchange of nutrients among connected plants. The Spring Mountains National Recreation Area (NRA) in Southern Nevada is the study site for examining ECMs due to its diverse ecosystem with numerous inhabiting species. To assess the effects of ECMs on the tree composition, literature review was conducted to outline previous methods. Through data analysis and observations of the sample sites, it is concluded that ECMs are highly likely to have an effect on tree composition of the Spring Mountains NRA. The purpose of this …

Effect Of Macronutrients On A Rat Model Of Clostridioides Difficile Infection, Stephanie Yang, Maria Niamba, Rose Jiang, Ashton Wippel, Efren Heredia, Liliko Watanabe, Katrina Valadez, Erica Bacab, Ernesto Abel-Santos

Undergraduate Research Symposium Posters

Clostridioides difficile (C. diff) is an anaerobic, spore forming, gram-positive bacteria. C. diff is the causative agent of C. difficile infections (CDIs) and is recognized as the leading cause of nosocomial infective diarrhea worldwide. CDI is associated with the use of antibiotics that alter the gut microbiome and C. diff resides in the large intestine where onset of the disease then occurs. Having observed the impacts of CDI on mice models, the Abel-Santos lab now shifts to observing this infectious disease in rat models. Establishing the infectious dosage at 109 spores, this study aims to identify the correlation between diet …

Effects Of Fire Temperatures On Mojave Desert Native And Nonnative Seeds, Sophia Lorenzana, Lindsay Chiquoine

Undergraduate Research Symposium Posters

Large-scale wildfires have been historically rare in hot deserts like the Mojave, largely due to the scarcity or uneven distribution of native plant biomass as fuel. Thus, native plants in these regions are ill-adapted to withstand spreading wildfire, resulting in slow post-fire recovery. Here, I test the hypothesis that nonnative grasses respond better to heat cues than native plant species. Seeds from 3 invasive and 13 native plant species were collected from research sites located in the eastern Mojave Desert, near surrounding Clark County Flood Control District weather stations. Seeds were buried in an artificial substrate mimicking field soil conditions …

Effects Of Low Dose Exposure To Radiation And Sleep Fragmentation On Discrimination In String-Pulling Behavior With Female Rats, Jonathan F. Cortez, Diana Lloyd, T. L. Garcia, A. Adhikari, N. M. Attallah, N. Moges, D. H. Rodgers, K. S. Dhede, K. D. Omengan, A. A. Blackwell

Undergraduate Research Symposium Posters

Astronauts will face harmful stressors, such as galactic cosmic radiation (GCR) and sleep fragmentation (SF), on a three-year space flight mission to Mars and back. Astronauts perform skilled reach-to-grasp behaviors on these missions, including interacting with controls to navigate the spacecraft. Recent work has shown that GCR and SF disrupt skilled reach-to-grasp behavior in rodent models; however, the underlying nature of these deficits is unknown. To determine if tactile sensation and proprioceptive feedback contribute to these impairments, this study evaluated the effects of radiation and SF exposure on memory and sensorimotor discrimination in a rodent model. Twenty-one outbred Wistar, retired …

Evaluating Human Plasma Biomakers For Alzheimer's Disease; Phosphorylated-Tau 217, Phosphorylated-Tau 181, And Glial Fibrillary Acidic Protein, Mason Jonah, Mayarae N. Mugosa, Bella Hou, Emma-Nikole Krilchev, Zhengshi Yang, Dietmar Cordes, Aaron Ritter, Jefferson W. Kinney

Undergraduate Research Symposium Posters

Alzheimer’s Disease (AD) is a progressive neurodegenerative disease that is primarily identifiable by amyloid-beta (Aβ) neuronal plaques, neurofibrillary tangles (NFT) that form as aggregates of hyperphosphorylated tau (ptau) proteins clump together, and the presence of neuroinflammation; all of which are otherwise known as the hallmarks of AD pathology. Recent emerging research has discovered striking similarities between AD and diabetes mellitus pathology, illustrating how insulin deficiency and insulin resistance–both of which result in the chronic hyperglycemic state seen in the diabetic–are involved in an increase in the phosphorylation of tau. This leads to and intensifies the formation of intracellular NFTs serving …

Association Between Polygenic Scores For Brain Structure And Alzheimer's Disease, Eunjae Lee, Faria Tavacoli, Tingwei Liu, Brittany Diaz Ruiz, Hayley Ho, Alice Lee, Jingchun Chen

Undergraduate Research Symposium Posters

Alzheimer’s disease (AD) is a progressive neurodegenerative condition and the most common type of dementia. Research has shown that volumetric changes in subcortical brain structures, which make up roughly 25% of the brain's total volume and affect many physiological functions. This research project aims to investigate the genetic association between brain structures and AD. GWAS data of eight different brain structures (ICV, accumbens, amygdala, caudate, hippocampus, pallidum, putamen, and thalamus) were used to create polygenic scores (PGSs) in a discovery (cases/controls = 2,651/2,768) and replication dataset (cases/controls = 553/644). We utilized PRSice-2 software to generate PGSs and assess genetic correlations …

Efficacy Of Banana Fibre Paper For The Management Of The Root-Knot Nematode, Meloidogyne Incognita, On Potato (Solanum Tuberosum) In Kenya, Dorris W. Kamau, Wanjohi Waceke, Laura Cortada, Onesmus Mwaura, Tahira Pirzada, Tim L. Sit, Eric Davis, Dick Guenther, Reny Mathew, Lokendra Pal, Saad Khan, Solveig Haukeland, James Kisaakye, Charles Opperman, Danny Coyne

All Peer-Reviewed Publications

Globally, potato (Solanum tuberosum) is a key staple food crop. In Kenya, it is the second most important food crop after maize. Among the various constraints to potato production are plant-parasitic nematodes. In particular, root-knot nematodes (Meloidogyne spp.) are a significant impediment to potato production, suppressing yield and reducing the quality of harvested tubers. The current study was undertaken to evaluate the efficacy of a lignocellulose fibre matrix (banana paper) either impregnated with a chemical or drenched with a biologically-based nematicide for the management of root-knot nematodes on potatoes, in Kenya. The experiment was conducted in both field and pot …

Clc-Kb Pore Mutation Disrupts Glycosylation And Triggers Distal Tubular Remodeling, Yogita Sharma, Robin Lo, Viktor N Tomilin, Kotdaji Ha, Holly Deremo, Wuxing Dong, Svetlana Lebedeva, Vivek Charu, Neeraja Kambham, Kerim Mutig, Oleh Pochynyuk, Vivek Bhalla

Faculty, Staff and Student Publications

Mutations in the CLCNKB gene (1p36), encoding the basolateral chloride channel ClC-Kb, cause type 3 Bartter syndrome. We identified a family with a mixed Bartter/Gitelman phenotype and early-onset kidney failure and by employing a candidate gene approach, identified what we believe is a novel homozygous mutation (CLCNKB c.499G>T [p.Gly167Cys]) in exon 6 of CLCNKB in the index patient. We then validated these results with Sanger and whole-exome sequencing. Compared with wild-type ClC-Kb, the Gly167Cys mutant conducted less current and exhibited impaired complex N-linked glycosylation in vitro. We demonstrated that loss of Gly-167, rather than gain of a mutant Cys, …

Differences In Physiological Responses Between Two Repeated Sprint Protocols In Female Soccer Players, Emma Hörnlund, Spyridon Hadjispyrou, Apostolos Theos

International Journal of Exercise Science

International Journal of Exercise Science 17(6): 1605-1617, 2024. Soccer is a team sport characterized by repeated high-intensity sprints followed by brief periods of recovery. Repeated sprints with (RCOD) and without (RSA) change-of-direction has therefore been recognized as an important fitness component. The purpose of the present study was to examine the differences in physiological responses between RSA and RCOD, and the relationship with Yo-Yo intermittent recovery test (YYIR1), as an estimate of aerobic capacity, in female soccer players. Thirteen female soccer players (age: 20.8 ± 2.6 years) participated. All players performed an RSA and RCOD test, as well as a …

Distinct Visual Processing Patterns In Female Elite Athletes: A Comparative Study Of Gymnastics, Soccer, And Esports Using Visual P300 Event-Related Potentials, Papatsorn Ramyarangsi, Simon J. Bennett, Vorasith Siripornpanich, Ampika Nanbancha, Akachai Pokaisasawan, Prapan Noppongsakit, Amornpan Ajjimaporn

International Journal of Exercise Science

International Journal of Exercise Science 17(5): 1595-1604, 2024. Visual processing is crucial for sports performance, influencing athletes' ability to interpret and respond to visual stimuli. This study investigated distinct visual processing patterns among Thai elite athletes in gymnastics, soccer, and esports, utilizing visual P300 event-related potentials (P300 ERPs). Forty-two female athletes (14 gymnasts, 14 soccer players, and 14 esports athletes) participated. Visual P300 ERP responses were stimulated using the visual oddball paradigm. One-way ANOVA was employed to assess significant differences among the groups in P300 ERPs data, including amplitude and latency of waveforms, response time, and accuracy rate. Significant differences …

Food Safety, Livestock Health, And Productivity Of A Layer Farm Following Implementation Of A Certified Haccp System In Japan, Hiroshi Akaike, Makoto Nagai, Tomomitsu Alexandre Okatani, Sumalee Boonmar, Yukio Morita

The Thai Journal of Veterinary Medicine

This study examined the safety and productivity of a layer farm over a 3-year period following the implementation of a farm Hazard Analysis and Critical Control Points (HACCP) system in 2019. The critical control point was “automatic egg collection” and no deviations from critical limits were observed, indicating the eggs were safe. In addition, the egg production rate increased and the feed conversion rate decreased. In contrast, the viability after the introduction of a farm HACCP system, in which the replenishment of new hens was discontinued after forced molting, showed an increasing trend. These results suggest that the HACCP system …

Tissue Proteomics Of Feline Mammary Carcinoma: Identification Of Potential Biomarkers Based On Metastatic Status And Histopathological Characteristics, Weejarin Paphussaro, Sittiruk Roytrakul, Narumon Phaonakrop, Sawanya Charoenlappanit, Anudep Rungsipipat, Theerawat Tharasanit, Gunnaporn Suriyaphol Assoc. Prof.

The Thai Journal of Veterinary Medicine

Feline mammary carcinoma (FMC) is a prevalent and aggressive cancer with high metastatic potential. Few tissue biomarkers have been reported to help evaluate disease progression in FMC. This study aimed to analyze the tissue proteomic profiles of metastatic feline mammary carcinoma (mFMC) and non-metastatic FMC (NmFMC) across various histological grades (HGs) and histological types (HTs) using liquid chromatography-tandem mass spectrometry (LC-MS/MS). Tissue samples were collected from 13 NmFMC, 26 mFMC and 13 healthy controls (CTRL). Samples were trypsinized and subjected to LC-MS/MS. Proteome results were analyzed based on the metastatic status, HGs and HTs of the samples. The findings revealed …

The View From Ventress - 2023-2024 Academic Year, University Of Mississippi, College Of Liberal Arts

Liberal Arts Newsletters

News from the College of Liberal Arts

Modulation Of Monocyte Effector Functions And Gene Expression By Human Cytomegalovirus Infection, Matthew Planchon, Jay Fishman, Joseph El Khoury

SKMC Student Presentations and Publications

Monocytes are crucial players in innate immunity. The human cytomegalovirus (CMV) infection has significant impacts on monocyte effector functions and gene expression. CMV, a β-herpesvirus, disrupts key monocyte roles, including phagocytosis, antigen presentation, cytokine production, and migration, impairing their ability to combat pathogens and activate adaptive immune responses. CMV modulates monocyte gene expression, decreasing their capacity for antigen presentation and phagocytosis while increasing pro-inflammatory cytokine production, which can contribute to tissue damage and chronic inflammation. CMV also alters monocyte migration to sites of infection while promoting trans-endothelial migration, thus aiding viral dissemination. Additionally, the virus affects reactive oxygen species (ROS) …

Applying Visual Identity At The Main Entrances To Cities (Case Study: Entrance To Beni Suef City), Nesma Mohamed Abd El- Maksoud

Mansoura Engineering Journal

Egypt’s vision and many initiatives, such as the “Controlling Egyptian Urbanism and Supporting Visual Identity” initiative, seek to create a visual identity for Egypt’s governorates, to deepen the concept of national belonging, and to issue a guideline for visual identity at the level of each governorate. The visual identity of cities is produced from a set of urban, social, cultural, historical, and environmental variables. Economically, the research studies how to link the urban and visual identity of cities and express it through the entrances to cities and the urban spaces surrounding them to improve and develop the city’s local and …